Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000392.1

Orthogroup ID

OG0010866

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 3101

Gene Structure 3100 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000392.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1597 bp

atggcggcctcagtccagcagaaccgccagttccctcacatcgaccccgccctaaacggcgtcgtccgctcctctttcaaatcaagtactcccaaccgccacttccaagacatcactacatccccgaaaagctcggccccgatcgatcactacgacgaatcgtcctccagcgacgacgaaaacgacgagagcatcgtagagtacatggatttggtccggagaggcaacagagaattagagccgtcgatcttggaccccagagatgaggccacgtcggacagctgggtggagcgcaacgccagcatggtccgcctcacagggaaacaccccttcaactcggagccgccgctcagccggctcatgcaccacggcttcatcactccggtcccactccactacgtccgcaaccacggcgtcgtccccaaggccacgtggcacgactggaccgtcgaggtcaccggcctcgtcaagcggcccgcccggttcaccatggaccagctcaccaccgagtttcgcgcccgcgagctccccgtcaccctcgtttgcgcgggaaaccgccgcaaggagcagaacatggtgaagcagacgatcggattcaactggggcgccgccggcgtctccacctcggtctggcgcggcgtgcgcctccgcgacgtcctcaagcggtgcgggatctacagccgcaaaggcggcgccctcaacgtgtgcttcgaaggcgccgaggacctgccaggtggcggtgggtccaagtacgccaccagtctgagaaaagaggtggccatggacgagagcagggatatcatacttgcttacatgcaaaacggcgagcgtttggcccccgatcacgggtttccggttcgggtgatcatacccggatttatagggggccggatggtgaaatggctcaaacgcatcgtcgtgacgacgaaggagtcggactgttattatcattacaaggacaacagggtccttccctcgcatgtggatgccgagctggccaacgctgaagcgtggtggtacaagccggagtacataatcaacgagctgaacataaactcggtcattacgacgccgtctcacgaggagatattgtcgataaattcgtggacgaggccgtacaccctcaaaggctacgcatattccggagggggtaagaaagtgacacgagtggaggtgactctagacggtggggagacctggcacgtctgcaatctggaccaccaagagaagccgaacaaatatgggaaatactggtgctggtgcttctggtcactggacgtggaagtgctcaacttactggtagccaaagagattgcggtgagggcttgggacgaaacccacaacactcagcccgaaaagctcatctggaatgtcatgggaatgatgaacaactgttggttccgagtgaaaatcaatgtgttgccacacagaggagagattggaatagtgtttgagcatccaaccaaacccggaaaccaatccggcgggtggatggcaaaagagagacgcttggagaccgaatccaacgcaaccctcaagaagagtgtctcttcacccttcatgaacacttcatccaaggtctactcaatgtccgaag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001505 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005829 GO:0005886 GO:0006082 GO:0006807 GO:0006809 GO:0008150 GO:0008152 GO:0008940 GO:0009058 GO:0009314 GO:0009416 GO:0009605 GO:0009607 GO:0009608 GO:0009610 GO:0009620 GO:0009628 GO:0009703 GO:0009987 GO:0016020 GO:0016491 GO:0016661 GO:0017144 GO:0034641 GO:0042126 GO:0042128 GO:0042133 GO:0042136 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046209 GO:0046857 GO:0050896 GO:0051704 GO:0051707 GO:0055114 GO:0065007 GO:0065008 GO:0071704 GO:0071941 GO:0071944 GO:0072593 GO:1903409 GO:2001057

KEGG Pathways

Metabolic & Signaling

ko00910 ko01120 map00910 map01120

Pfam Domains

Protein Families

Cyt-b5 FAD_binding_6 Mo-co_dimer NAD_binding_1 Oxidored_molyb

Protein Analysis

532

Amino Acids

60.47

Weight (kDa)

8.28

Isoelectric Point (pI)

46.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010866)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G37130 AT1G77760
fragaria_vesca	FvH4_5g39010
malus_domestica	MD08G1172400.v1.1 MD15G1357900.v1.1
prunus_persica	Prupe.1G505400_v2.0.a1
pyrus_communis	pycom08g14700 pycom15g32000
rosa_chinensis	RchiOBHm_Chr7g0240971
rosa_laevigata	RLG00000000608
rosa_multiflora	Rmu_co8418311.1_g000001 Rmu_sc0041887.1_g000001 Rmu_ssc0000392.1_g000001
rosa_roxburghii	Rroxscaffold_3G00219350
rosa_rugosa	Rorug07G0341100
rosa_samantha	Rh7AG495900 Rh7BG467400 Rh7CG513400 Rh7DG480400
rosa_wichuraiana	Rw7G041900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	446, 931, 965
AatII	GACGTC	1 cut(s)	657
Acc36I	ACCTGC	1 cut(s)	735
AccB1I	GGYRCC	3 cut(s)	605, 692, 716
AccBSI	CCGCTC	2 cut(s)	69, 349
AccI	GTMKAC	1 cut(s)	1581
AccII	CGCG	5 cut(s)	516, 522, 548, 636, 651
AccIII	TCCGGA	2 cut(s)	216, 1142
AclWI	GGATC	1 cut(s)	680
AcoI	YGGCCR	2 cut(s)	777, 996
AcsI	RAATTY	1 cut(s)	1099
AcuI	CTGAAG	1 cut(s)	1026
AcvI	CACGTG	1 cut(s)	432
AcyI	GRCGYC	8 cut(s)	60, 414, 606, 615, 654, 693, 717, 1070
AfaI	GTAC	6 cut(s)	88, 203, 752, 1019, 1031, 1118
AfiI	CCNNNNNNNGG	7 cut(s)	562, 630, 737, 845, 846, 1430, 1488
AflIII	ACRYGT	1 cut(s)	702
AgsI	TTSAA	3 cut(s)	79, 334, 598
AhdI	GACNNNNNGTC	1 cut(s)	160
AjiI	CACGTC	3 cut(s)	273, 1204, 1279
AjnI	CCWGG	2 cut(s)	730, 1196
AjuI	GAANNNNNNNTTGG	2 cut(s)	86, 118
AloI	GAACNNNNNNTCC	2 cut(s)	1556, 1588
AluBI	AGCT	7 cut(s)	132, 282, 499, 526, 994, 1045, 1360
AluI	AGCT	7 cut(s)	132, 282, 499, 526, 994, 1045, 1360
Alw21I	GWGCWC	2 cut(s)	528, 1290
Alw26I	GTCTC	6 cut(s)	622, 1080, 1187, 1498, 1508, 1552
AlwI	GGATC	1 cut(s)	680
Aor13HI	TCCGGA	2 cut(s)	216, 1142
ApoI	RAATTY	1 cut(s)	1099
ArsI	GACNNNNNNTTYG	2 cut(s)	900, 932
AspLEI	GCGC	8 cut(s)	294, 518, 548, 608, 636, 645, 695, 719
AsuC2I	CCSGG	3 cut(s)	481, 873, 1470
AsuII	TTCGAA	1 cut(s)	711
BalI	TGGCCA	2 cut(s)	779, 998
BanI	GGYRCC	3 cut(s)	605, 692, 716
BanII	GRGCYC	1 cut(s)	528
BauI	CACGAG	2 cut(s)	1079, 1164
BbrPI	CACGTG	1 cut(s)	432
Bbv12I	GWGCWC	2 cut(s)	528, 1290
BccI	CCATC	2 cut(s)	886, 1486
BceAI	ACGGC	7 cut(s)	73, 226, 385, 427, 838, 1057, 1099
BciT130I	CCWGG	2 cut(s)	732, 1198
BclI	TGATCA	1 cut(s)	864
BcnI	CCSGG	3 cut(s)	481, 873, 1470
BcoDI	GTCTC	6 cut(s)	622, 1080, 1187, 1498, 1508, 1552
BfaI	CTAG	1 cut(s)	1181
BfmI	CTRYAG	1 cut(s)	676
BfoI	RGCGCY	3 cut(s)	609, 696, 720
BfuAI	ACCTGC	1 cut(s)	735
BglI	GCCNNNNNGGC	2 cut(s)	687, 995
BisI	GCNGC	9 cut(s)	6, 344, 347, 473, 559, 609, 637, 682, 691
BlpI	GCTNAGC	1 cut(s)	350
BlsI	GCNGC	9 cut(s)	7, 345, 348, 474, 560, 610, 638, 683, 692
BmcAI	AGTACT	1 cut(s)	88
Bme1390I	CCNGG	5 cut(s)	481, 732, 873, 1198, 1470
BmeRI	GACNNNNNGTC	1 cut(s)	160
BmgBI	CACGTC	3 cut(s)	273, 1204, 1279
BmrFI	CCNGG	5 cut(s)	481, 732, 873, 1198, 1470
BmrI	ACTGGG	1 cut(s)	610
BmsI	GCATC	4 cut(s)	201, 921, 976, 1465
BmuI	ACTGGG	1 cut(s)	610
BpmI	CTGGAG	1 cut(s)	151
Bpu1102I	GCTNAGC	1 cut(s)	350
Bpu14I	TTCGAA	1 cut(s)	711
BpuEI	CTTGAG	2 cut(s)	644, 1520
BpuMI	CCSGG	3 cut(s)	481, 873, 1470
Bsa29I	ATCGAT	1 cut(s)	144
BsaAI	YACGTR	1 cut(s)	432
BsaHI	GRCGYC	8 cut(s)	60, 414, 606, 615, 654, 693, 717, 1070
BsaI	GGTCTC	2 cut(s)	1187, 1508
BsaJI	CCNNGG	8 cut(s)	367, 409, 423, 489, 624, 720, 780, 1575
BsaWI	WCCGGW	4 cut(s)	216, 382, 853, 1142
BsaXI	ACNNNNNCTCC	2 cut(s)	1076, 1106
Bsc4I	CCNNNNNNNGG	7 cut(s)	562, 630, 737, 845, 846, 1430, 1488
Bse118I	RCCGGY	3 cut(s)	354, 458, 611
Bse1I	ACTGG	7 cut(s)	28, 446, 605, 759, 1256, 1278, 1302
BseAI	TCCGGA	2 cut(s)	216, 1142
BseBI	CCWGG	2 cut(s)	732, 1198
BseCI	ATCGAT	1 cut(s)	144
BseDI	CCNNGG	8 cut(s)	367, 409, 423, 489, 624, 720, 780, 1575
BseGI	GGATG	6 cut(s)	119, 897, 991, 1456, 1497, 1571
BseLI	CCNNNNNNNGG	7 cut(s)	562, 630, 737, 845, 846, 1430, 1488
BseMII	CTCAG	4 cut(s)	24, 364, 755, 1361
BseNI	ACTGG	7 cut(s)	28, 446, 605, 759, 1256, 1278, 1302
BseRI	GAGGAG	3 cut(s)	61, 1097, 1446
BseYI	CCCAGC	1 cut(s)	282
Bsh1236I	CGCG	5 cut(s)	516, 522, 548, 636, 651
Bsh1285I	CGRYCG	2 cut(s)	144, 591
BshNI	GGYRCC	3 cut(s)	605, 692, 716
BshVI	ATCGAT	1 cut(s)	144
BsiEI	CGRYCG	2 cut(s)	144, 591
BsiHKAI	GWGCWC	2 cut(s)	528, 1290
BslFI	GGGAC	3 cut(s)	371, 404, 1343
BslI	CCNNNNNNNGG	7 cut(s)	562, 630, 737, 845, 846, 1430, 1488
BsmAI	GTCTC	6 cut(s)	622, 1080, 1187, 1498, 1508, 1552
BsmBI	CGTCTC	3 cut(s)	622, 1080, 1498
BsmFI	GGGAC	3 cut(s)	371, 404, 1343
Bso31I	GGTCTC	2 cut(s)	1187, 1508
Bsp119I	TTCGAA	1 cut(s)	711
Bsp1286I	GDGCHC	2 cut(s)	528, 1290
Bsp13I	TCCGGA	2 cut(s)	216, 1142
Bsp143I	GATC	7 cut(s)	141, 145, 246, 588, 672, 841, 864
Bsp1720I	GCTNAGC	1 cut(s)	350
Bsp19I	CCATGG	2 cut(s)	489, 780
BspCNI	CTCAG	4 cut(s)	23, 363, 756, 1360
BspDI	ATCGAT	1 cut(s)	144
BspEI	TCCGGA	2 cut(s)	216, 1142
BspFNI	CGCG	5 cut(s)	516, 522, 548, 636, 651
BspHI	TCATGA	1 cut(s)	1560
BspMI	ACCTGC	1 cut(s)	735
BspPI	GGATC	1 cut(s)	680
BspT104I	TTCGAA	1 cut(s)	711
BspT107I	GGYRCC	3 cut(s)	605, 692, 716
BspTNI	GGTCTC	2 cut(s)	1187, 1508
BsrBI	CCGCTC	2 cut(s)	69, 349
BsrFI	RCCGGY	3 cut(s)	354, 458, 611
BsrI	ACTGG	7 cut(s)	28, 446, 605, 759, 1256, 1278, 1302
BssAI	RCCGGY	3 cut(s)	354, 458, 611
BssECI	CCNNGG	8 cut(s)	367, 409, 423, 489, 624, 720, 780, 1575
BssMI	GATC	7 cut(s)	141, 145, 246, 588, 672, 841, 864
BssNI	GRCGYC	8 cut(s)	60, 414, 606, 615, 654, 693, 717, 1070
BssSI	CACGAG	2 cut(s)	1079, 1164
BssT1I	CCWWGG	4 cut(s)	423, 489, 780, 1575
Bst2BI	CACGAG	2 cut(s)	1079, 1164
Bst2UI	CCWGG	2 cut(s)	732, 1198
Bst4CI	ACNGT	4 cut(s)	448, 941, 1187, 1394
Bst6I	CTCTTC	2 cut(s)	1535, 1555
BstACI	GRCGYC	8 cut(s)	60, 414, 606, 615, 654, 693, 717, 1070
BstBAI	YACGTR	1 cut(s)	432
BstBI	TTCGAA	1 cut(s)	711
BstC8I	GCNNGC	9 cut(s)	301, 356, 477, 520, 524, 613, 641, 827, 996
BstDEI	CTNAG	4 cut(s)	10, 350, 764, 1347
BstDSI	CCRYGG	4 cut(s)	367, 409, 489, 780
BstEII	GGTNACC	1 cut(s)	454
BstF5I	GGATG	6 cut(s)	119, 897, 991, 1456, 1497, 1571
BstFNI	CGCG	5 cut(s)	516, 522, 548, 636, 651
BstH2I	RGCGCY	3 cut(s)	609, 696, 720
BstHHI	GCGC	8 cut(s)	294, 518, 548, 608, 636, 645, 695, 719
BstKTI	GATC	7 cut(s)	144, 148, 249, 591, 675, 844, 867
BstMAI	GTCTC	6 cut(s)	622, 1080, 1187, 1498, 1508, 1552
BstMBI	GATC	7 cut(s)	141, 145, 246, 588, 672, 841, 864
BstMCI	CGRYCG	2 cut(s)	144, 591
BstNI	CCWGG	2 cut(s)	732, 1198
BstNSI	RCATGY	2 cut(s)	817, 983
BstPI	GGTNACC	1 cut(s)	454
BstSCI	CCNGG	5 cut(s)	479, 730, 871, 1196, 1468
BstSFI	CTRYAG	1 cut(s)	676
BstUI	CGCG	5 cut(s)	516, 522, 548, 636, 651
BstX2I	RGATCY	1 cut(s)	672
BstYI	RGATCY	1 cut(s)	672
Bsu15I	ATCGAT	1 cut(s)	144
BsuTUI	ATCGAT	1 cut(s)	144
BtgI	CCRYGG	4 cut(s)	367, 409, 489, 780
BtrI	CACGTC	3 cut(s)	273, 1204, 1279
BtsCI	GGATG	6 cut(s)	119, 897, 991, 1456, 1497, 1571
BtsIMutI	CAGTG	1 cut(s)	1271
BveI	ACCTGC	1 cut(s)	735
Cac8I	GCNNGC	9 cut(s)	301, 356, 477, 520, 524, 613, 641, 827, 996
CciI	TCATGA	1 cut(s)	1560
CfoI	GCGC	8 cut(s)	294, 518, 548, 608, 636, 645, 695, 719
Cfr10I	RCCGGY	3 cut(s)	354, 458, 611
ClaI	ATCGAT	1 cut(s)	144
CseI	GACGC	5 cut(s)	49, 403, 604, 1078, 1515
Csp6I	GTAC	6 cut(s)	87, 202, 751, 1018, 1030, 1117
CviQI	GTAC	6 cut(s)	87, 202, 751, 1018, 1030, 1117
DdeI	CTNAG	4 cut(s)	10, 350, 764, 1347
DinI	GGCGCC	3 cut(s)	607, 694, 718
DpnI	GATC	7 cut(s)	143, 147, 248, 590, 674, 843, 866
DpnII	GATC	7 cut(s)	141, 145, 246, 588, 672, 841, 864
DrdI	GACNNNNNNGTC	3 cut(s)	446, 931, 965
DriI	GACNNNNNGTC	1 cut(s)	160
DseDI	GACNNNNNNGTC	3 cut(s)	446, 931, 965
EaeI	YGGCCR	2 cut(s)	777, 996
Eam1104I	CTCTTC	2 cut(s)	1535, 1555
Eam1105I	GACNNNNNGTC	1 cut(s)	160
EarI	CTCTTC	2 cut(s)	1535, 1555
EciI	GGCGGA	1 cut(s)	299
Ecl136II	GAGCTC	1 cut(s)	526
Eco130I	CCWWGG	4 cut(s)	423, 489, 780, 1575
Eco24I	GRGCYC	1 cut(s)	528
Eco31I	GGTCTC	2 cut(s)	1187, 1508
Eco32I	GATATC	1 cut(s)	799
Eco53kI	GAGCTC	1 cut(s)	526
Eco57I	CTGAAG	1 cut(s)	1026
Eco72I	CACGTG	1 cut(s)	432
Eco91I	GGTNACC	1 cut(s)	454
EcoICRI	GAGCTC	1 cut(s)	526
EcoO109I	RGGNCCY	2 cut(s)	724, 967
EcoO65I	GGTNACC	1 cut(s)	454
EcoRII	CCWGG	2 cut(s)	730, 1196
EcoRV	GATATC	1 cut(s)	799
EcoT14I	CCWWGG	4 cut(s)	423, 489, 780, 1575
EcoT38I	GRGCYC	1 cut(s)	528
EgeI	GGCGCC	3 cut(s)	607, 694, 718
EheI	GGCGCC	3 cut(s)	607, 694, 718
ErhI	CCWWGG	4 cut(s)	423, 489, 780, 1575
Esp3I	CGTCTC	3 cut(s)	622, 1080, 1498
FaqI	GGGAC	3 cut(s)	371, 404, 1343
FauI	CCCGC	6 cut(s)	55, 484, 527, 541, 662, 1478
FbaI	TGATCA	1 cut(s)	864
FblI	GTMKAC	1 cut(s)	1581
Fnu4HI	GCNGC	9 cut(s)	6, 344, 347, 473, 559, 609, 637, 682, 691
FokI	GGATG	6 cut(s)	106, 904, 998, 1443, 1504, 1558
FriOI	GRGCYC	1 cut(s)	528
Fsp4HI	GCNGC	9 cut(s)	6, 344, 347, 473, 559, 609, 637, 682, 691
FspBI	CTAG	1 cut(s)	1181
GlaI	GCGC	8 cut(s)	293, 517, 547, 607, 635, 644, 694, 718
GluI	GCNGC	9 cut(s)	6, 344, 347, 473, 559, 609, 637, 682, 691
GsaI	CCCAGC	1 cut(s)	286
GsuI	CTGGAG	1 cut(s)	151
HaeII	RGCGCY	3 cut(s)	609, 696, 720
HgaI	GACGC	5 cut(s)	49, 403, 604, 1078, 1515
HhaI	GCGC	8 cut(s)	294, 518, 548, 608, 636, 645, 695, 719
Hin1I	GRCGYC	8 cut(s)	60, 414, 606, 615, 654, 693, 717, 1070
Hin6I	GCGC	8 cut(s)	292, 516, 546, 606, 634, 643, 693, 717
HinP1I	GCGC	8 cut(s)	292, 516, 546, 606, 634, 643, 693, 717
HinfI	GANTC	5 cut(s)	158, 594, 932, 1177, 1520
Hpy166II	GTNNAC	4 cut(s)	486, 1107, 1119, 1582
Hpy188I	TCNGA	7 cut(s)	277, 340, 593, 765, 937, 1403, 1594
Hpy188III	TCNNGA	9 cut(s)	217, 919, 1079, 1143, 1181, 1214, 1366, 1537, 1561
Hpy8I	GTNNAC	4 cut(s)	486, 1107, 1119, 1582
HpyAV	CCTTC	5 cut(s)	340, 707, 922, 980, 1567
HpyCH4III	ACNGT	4 cut(s)	448, 941, 1187, 1394
HpyCH4IV	ACGT	7 cut(s)	272, 399, 431, 654, 702, 1203, 1278
HpyCH4V	TGCA	3 cut(s)	364, 817, 1209
HpyF3I	CTNAG	4 cut(s)	10, 350, 764, 1347
HpySE526I	ACGT	7 cut(s)	272, 399, 431, 654, 702, 1203, 1278
Hsp92I	GRCGYC	8 cut(s)	60, 414, 606, 615, 654, 693, 717, 1070
HspAI	GCGC	8 cut(s)	292, 516, 546, 606, 634, 643, 693, 717
KasI	GGCGCC	3 cut(s)	605, 692, 716
Kpn2I	TCCGGA	2 cut(s)	216, 1142
KroI	GCCGGC	2 cut(s)	354, 611
KroNI	GCCGGC	2 cut(s)	356, 613
Ksp22I	TGATCA	1 cut(s)	864
Kzo9I	GATC	7 cut(s)	141, 145, 246, 588, 672, 841, 864
LmnI	GCTCC	5 cut(s)	74, 289, 340, 531, 565
LweI	GCATC	4 cut(s)	201, 921, 976, 1465
MaeI	CTAG	1 cut(s)	1181
MaeII	ACGT	7 cut(s)	272, 399, 431, 654, 702, 1203, 1278
MaeIII	GTNAC	6 cut(s)	454, 532, 919, 1159, 1174, 1269
MalI	GATC	7 cut(s)	143, 147, 248, 590, 674, 843, 866
MbiI	CCGCTC	2 cut(s)	69, 349
MboI	GATC	7 cut(s)	141, 145, 246, 588, 672, 841, 864
MboII	GAAGA	2 cut(s)	1542, 1552
MflI	RGATCY	1 cut(s)	672
MhlI	GDGCHC	2 cut(s)	528, 1290
MlsI	TGGCCA	2 cut(s)	779, 998
MluCI	AATT	2 cut(s)	233, 1099
MluNI	TGGCCA	2 cut(s)	779, 998
Mly113I	GGCGCC	3 cut(s)	606, 693, 717
MlyI	GAGTC	2 cut(s)	941, 1171
MmeI	TCCRAC	4 cut(s)	255, 915, 1484, 1548
Mox20I	TGGCCA	2 cut(s)	779, 998
MreI	CGCCGGCG	1 cut(s)	611
MroI	TCCGGA	2 cut(s)	216, 1142
MroNI	GCCGGC	2 cut(s)	354, 611
MscI	TGGCCA	2 cut(s)	779, 998
MslI	CAYNNNNRTG	3 cut(s)	917, 984, 1379
Msp20I	TGGCCA	2 cut(s)	779, 998
MspA1I	CMGCKG	1 cut(s)	282
MspR9I	CCNGG	5 cut(s)	481, 732, 873, 1198, 1470
MvaI	CCWGG	2 cut(s)	732, 1198
MvnI	CGCG	5 cut(s)	516, 522, 548, 636, 651
NaeI	GCCGGC	2 cut(s)	356, 613
NarI	GGCGCC	3 cut(s)	606, 693, 717
NciI	CCSGG	3 cut(s)	481, 873, 1470
NcoI	CCATGG	2 cut(s)	489, 780
NdeII	GATC	7 cut(s)	141, 145, 246, 588, 672, 841, 864
NgoMIV	GCCGGC	2 cut(s)	354, 611
NmeAIII	GCCGAG	3 cut(s)	113, 745, 1015
NmuCI	GTSAC	6 cut(s)	454, 532, 919, 1159, 1174, 1269
NspI	RCATGY	2 cut(s)	817, 983
NspV	TTCGAA	1 cut(s)	711
PagI	TCATGA	1 cut(s)	1560
PcsI	WCGNNNNNNNCGW	9 cut(s)	150, 180, 183, 192, 444, 708, 717, 1064, 1100
PdiI	GCCGGC	2 cut(s)	356, 613
PfeI	GAWTC	3 cut(s)	158, 594, 1520
PflFI	GACNNNGTC	1 cut(s)	1072
PkrI	GCNGC	9 cut(s)	7, 345, 348, 474, 560, 610, 638, 683, 692
Ple19I	CGATCG	2 cut(s)	144, 591
PleI	GAGTC	2 cut(s)	940, 1171
PluTI	GGCGCC	3 cut(s)	609, 696, 720
PmaCI	CACGTG	1 cut(s)	432
PmlI	CACGTG	1 cut(s)	432
PpsI	GAGTC	2 cut(s)	940, 1171
Ppu21I	YACGTR	1 cut(s)	432
PpuMI	RGGWCCY	2 cut(s)	724, 967
Psp124BI	GAGCTC	1 cut(s)	528
Psp5II	RGGWCCY	2 cut(s)	724, 967
Psp6I	CCWGG	2 cut(s)	730, 1196
PspCI	CACGTG	1 cut(s)	432
PspEI	GGTNACC	1 cut(s)	454
PspFI	CCCAGC	1 cut(s)	282
PspGI	CCWGG	2 cut(s)	730, 1196
PspPPI	RGGWCCY	2 cut(s)	724, 967
PsuI	RGATCY	1 cut(s)	672
PsyI	GACNNNGTC	1 cut(s)	1072
PvuI	CGATCG	2 cut(s)	144, 591
PvuII	CAGCTG	1 cut(s)	282
RsaI	GTAC	6 cut(s)	88, 203, 752, 1019, 1031, 1118
RsaNI	GTAC	6 cut(s)	87, 202, 751, 1018, 1030, 1117
RseI	CAYNNNNRTG	3 cut(s)	917, 984, 1379
SacI	GAGCTC	1 cut(s)	528
SatI	GCNGC	9 cut(s)	6, 344, 347, 473, 559, 609, 637, 682, 691
Sau3AI	GATC	7 cut(s)	141, 145, 246, 588, 672, 841, 864
ScaI	AGTACT	1 cut(s)	88
SchI	GAGTC	2 cut(s)	941, 1171
ScrFI	CCNGG	5 cut(s)	481, 732, 873, 1198, 1470
SduI	GDGCHC	2 cut(s)	528, 1290
SfaNI	GCATC	4 cut(s)	201, 921, 976, 1465
SfcI	CTRYAG	1 cut(s)	676
SfoI	GGCGCC	3 cut(s)	607, 694, 718
SfuI	TTCGAA	1 cut(s)	711
SgrAI	CRCCGGYG	1 cut(s)	611
SmiMI	CAYNNNNRTG	3 cut(s)	917, 984, 1379
SmlI	CTYRAG	2 cut(s)	659, 1535
SmoI	CTYRAG	2 cut(s)	659, 1535
Sse9I	AATT	2 cut(s)	233, 1099
SspDI	GGCGCC	3 cut(s)	605, 692, 716
SspMI	CTAG	1 cut(s)	1181
SstI	GAGCTC	1 cut(s)	528
StyD4I	CCNGG	5 cut(s)	479, 730, 871, 1196, 1468
StyI	CCWWGG	4 cut(s)	423, 489, 780, 1575
TaaI	ACNGT	4 cut(s)	448, 941, 1187, 1394
TaiI	ACGT	7 cut(s)	275, 402, 434, 657, 705, 1206, 1281
TaqI	TCGA	6 cut(s)	42, 144, 245, 450, 711, 1094
TaqII	GACCGA	3 cut(s)	616, 1048, 1532
TasI	AATT	2 cut(s)	233, 1099
TatI	WGTACW	3 cut(s)	86, 201, 1029
TauI	GCSGC	9 cut(s)	8, 346, 349, 475, 561, 611, 639, 684, 693
TfiI	GAWTC	3 cut(s)	158, 594, 1520
TscAI	CASTG	1 cut(s)	1278
TseFI	GTSAC	6 cut(s)	454, 532, 919, 1159, 1174, 1269
Tsp45I	GTSAC	6 cut(s)	454, 532, 919, 1159, 1174, 1269
TspDTI	ATGAA	5 cut(s)	364, 1400, 1549, 1560, 1577
TspRI	CASTG	1 cut(s)	1278
Tth111I	GACNNNGTC	1 cut(s)	1072
XapI	RAATTY	1 cut(s)	1099
XbaI	TCTAGA	1 cut(s)	1180
XceI	RCATGY	2 cut(s)	817, 983
XmiI	GTMKAC	1 cut(s)	1581
XspI	CTAG	1 cut(s)	1181
ZraI	GACGTC	1 cut(s)	655
ZrmI	AGTACT	1 cut(s)	88

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.