Prupe.1G513100_v2.0.a1

Metallophosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0013686
Physical Location & Seq
Forward (+)
42227865 .. 42230852
2988 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G513100.1

Sequence Viewer

Length: 1170 bp
ATGGCGGTTGGGTGGAAGCCATTGTTGCCCCTAATCGCAGTCTCAGCTCTGTTCATCTATGAAGAGTGGGTCTCATCTCCTTCCTGCAAAAGGTTACCTAGCCCTAACCTCCATGGCCATGAACCCAACCAGGACCACCCAGACGACCTCAAGGTCATGATGGTCGCCAATCTCCTCCTCCTGGGCTCCGAGGCCGGCTACTTCAACCTCCTCTTCAGAGACTACTACTTGTCCAGGTTCTTCACGAATTCTTTCCGAACTTTGAAGCCCGATATGCTGTTAGTGTTGGGCGATATCTCGGCCCGAGGTTACAAATTGCCGAATTCCAAGTACATTTCGGTGATTCACCAGTTTCAGCGTGTATTGGGTCCATTTCTCGGGCTGCCACTTCACGTTGTTCTTGGCGACCGAGATATCGGAGAGTGCGATAAGCTAAGTTCGGATTTGGTGAGTTGGGTTTCGGGTAGATTTCCGGGTCTTGACTCTGCCGGTTGCGGAGCCTTCGAAATCGGTAATGTGAGTTTCGTGTCTCTAAATGCCGTGGCTTTGCTTTGCGGGAACAATGAGCTGAGGTTCAGTGTGGAGAAGGTGGTGGAGAGTGAAAGCATGGATTTTCAGATGGGAAGCGAGCTGGAGGGAATGGATGAGAATGGTCGAGTGAGGAAGAAGGTTTATGAGTTTGGGTGGAGAGAGAATGCTATGTCATCTGGGTCTGGTCCTGTGCTCTTGCTTCACTTCCCATTAAGCCAAACTGTAGCTGCTGCTAACTATGATAGGAGCAGGAGTTCAAGCATATTGGACGGCAGGGGTCGTGTTGGTACAGGGCCATACAATTTGTTACACAAGCTACCTCCAAATGCTACTGAATATATCTTTCAAGCTCTCAAACCAAGGATTGTTTTCAGTGCCCACACTCAGGAATTCCATGATCACTTCCACCCAGATGGGACTCGCGAGGTGACTGTTCCTGCCATGACATGGAATGCAAGGGATGATCCTGGATTTGTTGTTGCCATTTTCCGAAGGAACAAAGGAGAAGTAAGCGTCAGCTATTGCTCTCTAGCTAGGGAATCTCACGTTCTAATTGCCTATGTAACTCTTCTGATTCTTTTAGTACCAATGATGGTTTTCCCAAGCACGCCTAATTTAAGATGTTTTACACAAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

390

Amino Acids

43.36

Weight (kDa)

6.46

Isoelectric Point (pI)

33.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013686)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g37850 FvH4_5g37850
malus_domestica MD15G1365100.v1.1
prunus_persica Prupe.1G513100_v2.0.a1
pyrus_communis pycom15g32740
rosa_chinensis RchiOBHm_Chr7g0239831
rosa_laevigata RLG00000000727
rosa_multiflora Rmu_sc0000540.1_g000066 Rmu_sc0007193.1_g000009
rosa_roxburghii Rroxscaffold_3G00220780
rosa_rugosa Rorug07G0329600 Rorug07G0329700 Rorug07G0329800
rosa_samantha Rh7AG483800 Rh7BG456800 Rh7CG501300 Rh7DG469500
rosa_wichuraiana Rw7G040580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 152
AccB7I CCANNNNNTGG 1 cut(s) 978
AccII CGCG 1 cut(s) 954
AciI CCGC 3 cut(s) 5, 495, 555
AclWI GGATC 1 cut(s) 989
AcoI YGGCCR 1 cut(s) 115
AcsI RAATTY 3 cut(s) 247, 322, 920
AcuI CTGAAG 1 cut(s) 199
AfaI GTAC 3 cut(s) 332, 820, 1116
AfiI CCNNNNNNNGG 5 cut(s) 90, 181, 377, 916, 978
AgsI TTSAA 4 cut(s) 205, 265, 789, 878
AjnI CCWGG 4 cut(s) 129, 180, 233, 997
AloI GAACNNNNNNTCC 2 cut(s) 769, 801
AluBI AGCT 9 cut(s) 47, 433, 568, 631, 758, 847, 881, 1050, 1064
AluI AGCT 9 cut(s) 47, 433, 568, 631, 758, 847, 881, 1050, 1064
Alw21I GWGCWC 1 cut(s) 726
Alw26I GTCTC 4 cut(s) 46, 76, 213, 534
AlwI GGATC 1 cut(s) 989
Ama87I CYCGRG 2 cut(s) 303, 377
AoxI GGCC 4 cut(s) 115, 192, 300, 824
ApeKI GCWGC 3 cut(s) 382, 758, 761
ApoI RAATTY 3 cut(s) 247, 322, 920
Asp700I GAANNNNTTC 1 cut(s) 251
AspS9I GGNCC 5 cut(s) 133, 301, 368, 716, 824
AsuC2I CCSGG 1 cut(s) 474
AsuHPI GGTGA 4 cut(s) 338, 352, 460, 970
AsuII TTCGAA 1 cut(s) 504
AvaI CYCGRG 2 cut(s) 303, 377
AvaII GGWCC 3 cut(s) 133, 368, 716
BaeGI GKGCMC 1 cut(s) 910
BalI TGGCCA 1 cut(s) 117
BanII GRGCYC 1 cut(s) 188
Bbv12I GWGCWC 1 cut(s) 726
BbvCI CCTCAGC 1 cut(s) 569
BbvI GCAGC 3 cut(s) 369, 745, 748
BccI CCATC 4 cut(s) 154, 613, 938, 1117
BceAI ACGGC 2 cut(s) 524, 817
BciT130I CCWGG 4 cut(s) 131, 182, 235, 999
BclI TGATCA 1 cut(s) 928
BcnI CCSGG 1 cut(s) 474
BcoDI GTCTC 4 cut(s) 46, 76, 213, 534
BfaI CTAG 3 cut(s) 99, 1061, 1065
BfmI CTRYAG 1 cut(s) 753
BisI GCNGC 3 cut(s) 383, 759, 762
BlsI GCNGC 3 cut(s) 384, 760, 763
Bme1390I CCNGG 5 cut(s) 131, 182, 235, 474, 999
Bme18I GGWCC 3 cut(s) 133, 368, 716
BmeT110I CYCGRG 2 cut(s) 303, 377
BmgT120I GGNCC 5 cut(s) 133, 301, 368, 716, 824
BmiI GGNNCC 3 cut(s) 187, 369, 499
BmrFI CCNGG 5 cut(s) 131, 182, 235, 474, 999
BplI GAGNNNNNCTC 2 cut(s) 56, 88
BpmI CTGGAG 1 cut(s) 653
Bpu10I CCTNAGC 1 cut(s) 569
Bpu14I TTCGAA 1 cut(s) 504
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 1 cut(s) 474
BsaI GGTCTC 1 cut(s) 76
BsaJI CCNNGG 6 cut(s) 112, 181, 189, 304, 540, 890
BsaXI ACNNNNNCTCC 2 cut(s) 769, 799
Bsc4I CCNNNNNNNGG 5 cut(s) 90, 181, 377, 916, 978
Bse118I RCCGGY 2 cut(s) 194, 488
Bse1I ACTGG 1 cut(s) 349
BseBI CCWGG 4 cut(s) 131, 182, 235, 999
BseDI CCNNGG 6 cut(s) 112, 181, 189, 304, 540, 890
BseGI GGATG 2 cut(s) 649, 997
BseLI CCNNNNNNNGG 5 cut(s) 90, 181, 377, 916, 978
BseMII CTCAG 3 cut(s) 57, 560, 929
BseNI ACTGG 1 cut(s) 349
BseRI GAGGAG 3 cut(s) 164, 167, 200
BseSI GKGCMC 1 cut(s) 910
BseXI GCAGC 3 cut(s) 369, 745, 748
Bsh1236I CGCG 1 cut(s) 954
Bsh1285I CGRYCG 1 cut(s) 409
BshFI GGCC 4 cut(s) 117, 194, 302, 826
BsiEI CGRYCG 1 cut(s) 409
BsiHKAI GWGCWC 1 cut(s) 726
BsiHKCI CYCGRG 2 cut(s) 303, 377
BsiSI CCGG 3 cut(s) 195, 473, 489
BslFI GGGAC 1 cut(s) 961
BslI CCNNNNNNNGG 5 cut(s) 90, 181, 377, 916, 978
BsmAI GTCTC 4 cut(s) 46, 76, 213, 534
BsmFI GGGAC 1 cut(s) 961
BsmI GAATGC 2 cut(s) 700, 988
BsnI GGCC 4 cut(s) 117, 194, 302, 826
Bso31I GGTCTC 1 cut(s) 76
BsoBI CYCGRG 2 cut(s) 303, 377
Bsp119I TTCGAA 1 cut(s) 504
Bsp1286I GDGCHC 3 cut(s) 188, 726, 910
Bsp143I GATC 2 cut(s) 928, 994
Bsp19I CCATGG 1 cut(s) 112
Bsp68I TCGCGA 1 cut(s) 954
BspACI CCGC 3 cut(s) 5, 495, 555
BspANI GGCC 4 cut(s) 117, 194, 302, 826
BspCNI CTCAG 3 cut(s) 56, 561, 928
BspFNI CGCG 1 cut(s) 954
BspHI TCATGA 1 cut(s) 156
BspLI GGNNCC 3 cut(s) 187, 369, 499
BspPI GGATC 1 cut(s) 989
BspT104I TTCGAA 1 cut(s) 504
BspTNI GGTCTC 1 cut(s) 76
BsrFI RCCGGY 2 cut(s) 194, 488
BsrI ACTGG 1 cut(s) 349
BssAI RCCGGY 2 cut(s) 194, 488
BssECI CCNNGG 6 cut(s) 112, 181, 189, 304, 540, 890
BssMI GATC 2 cut(s) 928, 994
BssT1I CCWWGG 2 cut(s) 112, 890
Bst2UI CCWGG 4 cut(s) 131, 182, 235, 999
Bst4CI ACNGT 2 cut(s) 754, 964
Bst6I CTCTTC 3 cut(s) 57, 218, 1104
BstBI TTCGAA 1 cut(s) 504
BstC8I GCNNGC 3 cut(s) 196, 629, 1139
BstDEI CTNAG 4 cut(s) 43, 434, 569, 915
BstDSI CCRYGG 2 cut(s) 112, 540
BstEII GGTNACC 1 cut(s) 93
BstENI CCTNNNNNAGG 1 cut(s) 88
BstF5I GGATG 2 cut(s) 649, 997
BstFNI CGCG 1 cut(s) 954
BstKTI GATC 2 cut(s) 931, 997
BstMAI GTCTC 4 cut(s) 46, 76, 213, 534
BstMBI GATC 2 cut(s) 928, 994
BstMCI CGRYCG 1 cut(s) 409
BstMWI GCNNNNNNNGC 3 cut(s) 25, 44, 274
BstNI CCWGG 4 cut(s) 131, 182, 235, 999
BstPI GGTNACC 1 cut(s) 93
BstSCI CCNGG 5 cut(s) 129, 180, 233, 472, 997
BstSFI CTRYAG 1 cut(s) 753
BstSLI GKGCMC 1 cut(s) 910
BstUI CGCG 1 cut(s) 954
BstV1I GCAGC 3 cut(s) 369, 745, 748
BstXI CCANNNNNNTGG 1 cut(s) 944
BsuRI GGCC 4 cut(s) 117, 194, 302, 826
BtgI CCRYGG 2 cut(s) 112, 540
BtsCI GGATG 2 cut(s) 649, 997
BtsIMutI CAGTG 2 cut(s) 583, 910
BtuMI TCGCGA 1 cut(s) 954
Cac8I GCNNGC 3 cut(s) 196, 629, 1139
CciI TCATGA 1 cut(s) 156
Cfr10I RCCGGY 2 cut(s) 194, 488
Cfr13I GGNCC 5 cut(s) 133, 301, 368, 716, 824
CseI GACGC 1 cut(s) 1033
Csp6I GTAC 3 cut(s) 331, 819, 1115
CviAII CATG 7 cut(s) 113, 119, 157, 607, 926, 973, 978
CviQI GTAC 3 cut(s) 331, 819, 1115
DdeI CTNAG 4 cut(s) 43, 434, 569, 915
DpnI GATC 2 cut(s) 930, 996
DpnII GATC 2 cut(s) 928, 994
DrdI GACNNNNNNGTC 1 cut(s) 152
DseDI GACNNNNNNGTC 1 cut(s) 152
EaeI YGGCCR 1 cut(s) 115
Eam1104I CTCTTC 3 cut(s) 57, 218, 1104
EarI CTCTTC 3 cut(s) 57, 218, 1104
Eco130I CCWWGG 2 cut(s) 112, 890
Eco24I GRGCYC 1 cut(s) 188
Eco31I GGTCTC 1 cut(s) 76
Eco32I GATATC 2 cut(s) 295, 415
Eco47I GGWCC 3 cut(s) 133, 368, 716
Eco57I CTGAAG 1 cut(s) 199
Eco88I CYCGRG 2 cut(s) 303, 377
Eco91I GGTNACC 1 cut(s) 93
EcoNI CCTNNNNNAGG 1 cut(s) 88
EcoO65I GGTNACC 1 cut(s) 93
EcoRI GAATTC 3 cut(s) 247, 322, 920
EcoRII CCWGG 4 cut(s) 129, 180, 233, 997
EcoRV GATATC 2 cut(s) 295, 415
EcoT14I CCWWGG 2 cut(s) 112, 890
EcoT38I GRGCYC 1 cut(s) 188
ErhI CCWWGG 2 cut(s) 112, 890
FaeI CATG 7 cut(s) 116, 122, 160, 610, 929, 976, 981
FaqI GGGAC 1 cut(s) 961
FatI CATG 7 cut(s) 112, 118, 156, 606, 925, 972, 977
FauI CCCGC 1 cut(s) 548
FbaI TGATCA 1 cut(s) 928
Fnu4HI GCNGC 3 cut(s) 383, 759, 762
FokI GGATG 2 cut(s) 656, 1004
FriOI GRGCYC 1 cut(s) 188
Fsp4HI GCNGC 3 cut(s) 383, 759, 762
FspBI CTAG 3 cut(s) 99, 1061, 1065
GluI GCNGC 3 cut(s) 383, 759, 762
GsuI CTGGAG 1 cut(s) 653
HaeIII GGCC 4 cut(s) 117, 194, 302, 826
HapII CCGG 3 cut(s) 195, 473, 489
HgaI GACGC 1 cut(s) 1033
Hin1II CATG 7 cut(s) 116, 122, 160, 610, 929, 976, 981
HinfI GANTC 5 cut(s) 343, 482, 949, 1070, 1105
HpaII CCGG 3 cut(s) 195, 473, 489
HphI GGTGA 4 cut(s) 338, 352, 460, 970
Hpy188I TCNGA 8 cut(s) 190, 218, 257, 419, 442, 618, 1022, 1104
Hpy188III TCNNGA 5 cut(s) 157, 244, 479, 917, 953
HpyAV CCTTC 5 cut(s) 90, 511, 580, 661, 1017
HpyCH4III ACNGT 2 cut(s) 754, 964
HpyCH4IV ACGT 2 cut(s) 393, 1077
HpyCH4V TGCA 2 cut(s) 87, 986
HpyF10VI GCNNNNNNNGC 3 cut(s) 25, 44, 274
HpyF3I CTNAG 4 cut(s) 43, 434, 569, 915
HpySE526I ACGT 2 cut(s) 393, 1077
Hsp92II CATG 7 cut(s) 116, 122, 160, 610, 929, 976, 981
KroI GCCGGC 1 cut(s) 194
KroNI GCCGGC 1 cut(s) 196
Ksp22I TGATCA 1 cut(s) 928
Kzo9I GATC 2 cut(s) 928, 994
LmnI GCTCC 3 cut(s) 191, 497, 777
Lsp1109I GCAGC 3 cut(s) 369, 745, 748
MaeI CTAG 3 cut(s) 99, 1061, 1065
MaeII ACGT 2 cut(s) 393, 1077
MaeIII GTNAC 5 cut(s) 93, 308, 837, 958, 1093
MalI GATC 2 cut(s) 930, 996
MboI GATC 2 cut(s) 928, 994
MboII GAAGA 5 cut(s) 74, 205, 232, 676, 1091
MhlI GDGCHC 3 cut(s) 188, 726, 910
MlsI TGGCCA 1 cut(s) 117
MluCI AATT 7 cut(s) 247, 314, 322, 832, 920, 1083, 1144
MluNI TGGCCA 1 cut(s) 117
MlyI GAGTC 2 cut(s) 476, 943
Mox20I TGGCCA 1 cut(s) 117
MroNI GCCGGC 1 cut(s) 194
MroXI GAANNNNTTC 1 cut(s) 251
MscI TGGCCA 1 cut(s) 117
MseI TTAA 2 cut(s) 743, 1148
MslI CAYNNNNRTG 3 cut(s) 117, 338, 942
Msp20I TGGCCA 1 cut(s) 117
MspI CCGG 3 cut(s) 195, 473, 489
MspR9I CCNGG 5 cut(s) 131, 182, 235, 474, 999
Mva1269I GAATGC 2 cut(s) 700, 988
MvaI CCWGG 4 cut(s) 131, 182, 235, 999
MvnI CGCG 1 cut(s) 954
MwoI GCNNNNNNNGC 3 cut(s) 25, 44, 274
NaeI GCCGGC 1 cut(s) 196
NciI CCSGG 1 cut(s) 474
NcoI CCATGG 1 cut(s) 112
NdeII GATC 2 cut(s) 928, 994
NgoMIV GCCGGC 1 cut(s) 194
NlaIII CATG 7 cut(s) 116, 122, 160, 610, 929, 976, 981
NlaIV GGNNCC 3 cut(s) 187, 369, 499
NmeAIII GCCGAG 1 cut(s) 278
NmuCI GTSAC 1 cut(s) 958
NruI TCGCGA 1 cut(s) 954
NspV TTCGAA 1 cut(s) 504
PagI TCATGA 1 cut(s) 156
PcsI WCGNNNNNNNCGW 1 cut(s) 423
PctI GAATGC 2 cut(s) 700, 988
PdiI GCCGGC 1 cut(s) 196
PdmI GAANNNNTTC 1 cut(s) 251
PfeI GAWTC 3 cut(s) 343, 1070, 1105
PflMI CCANNNNNTGG 1 cut(s) 978
PfoI TCCNGGA 1 cut(s) 997
PkrI GCNGC 3 cut(s) 384, 760, 763
PleI GAGTC 2 cut(s) 476, 943
PpsI GAGTC 2 cut(s) 476, 943
Psp6I CCWGG 4 cut(s) 129, 180, 233, 997
PspEI GGTNACC 1 cut(s) 93
PspGI CCWGG 4 cut(s) 129, 180, 233, 997
PspN4I GGNNCC 3 cut(s) 187, 369, 499
PspPI GGNCC 5 cut(s) 133, 301, 368, 716, 824
RruI TCGCGA 1 cut(s) 954
RsaI GTAC 3 cut(s) 332, 820, 1116
RsaNI GTAC 3 cut(s) 331, 819, 1115
RseI CAYNNNNRTG 3 cut(s) 117, 338, 942
SaqAI TTAA 2 cut(s) 743, 1148
SatI GCNGC 3 cut(s) 383, 759, 762
Sau3AI GATC 2 cut(s) 928, 994
Sau96I GGNCC 5 cut(s) 133, 301, 368, 716, 824
SchI GAGTC 2 cut(s) 476, 943
ScrFI CCNGG 5 cut(s) 131, 182, 235, 474, 999
SduI GDGCHC 3 cut(s) 188, 726, 910
SfcI CTRYAG 1 cut(s) 753
SfuI TTCGAA 1 cut(s) 504
SinI GGWCC 3 cut(s) 133, 368, 716
SmiMI CAYNNNNRTG 3 cut(s) 117, 338, 942
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
Sse9I AATT 7 cut(s) 247, 314, 322, 832, 920, 1083, 1144
SsiI CCGC 3 cut(s) 5, 495, 555
SspMI CTAG 3 cut(s) 99, 1061, 1065
StyD4I CCNGG 5 cut(s) 129, 180, 233, 472, 997
StyI CCWWGG 2 cut(s) 112, 890
TaaI ACNGT 2 cut(s) 754, 964
TaiI ACGT 2 cut(s) 396, 1080
TaqI TCGA 2 cut(s) 504, 655
TaqII GACCGA 1 cut(s) 423
TasI AATT 7 cut(s) 247, 314, 322, 832, 920, 1083, 1144
TatI WGTACW 1 cut(s) 330
TfiI GAWTC 3 cut(s) 343, 1070, 1105
Tru1I TTAA 2 cut(s) 743, 1148
Tru9I TTAA 2 cut(s) 743, 1148
TscAI CASTG 2 cut(s) 583, 910
TseFI GTSAC 1 cut(s) 958
TseI GCWGC 3 cut(s) 382, 758, 761
Tsp45I GTSAC 1 cut(s) 958
TspDTI ATGAA 3 cut(s) 43, 75, 135
TspRI CASTG 2 cut(s) 583, 910
Van91I CCANNNNNTGG 1 cut(s) 978
VpaK11BI GGWCC 3 cut(s) 133, 368, 716
XagI CCTNNNNNAGG 1 cut(s) 88
XapI RAATTY 3 cut(s) 247, 322, 920
XmnI GAANNNNTTC 1 cut(s) 251
XspI CTAG 3 cut(s) 99, 1061, 1065
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.