pycom15g32740

Metallophosphoesterase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0013686
Physical Location & Seq
Forward (+)
31936233 .. 31939502
3270 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g32740.3

Sequence Viewer

Length: 1167 bp
ATGGTGGTTTCGTGGAAGCCGTTGTTGCCGCTAATCGCAGTCTCAGCTCTGCTCGTCTACGAAGAGTGGGTCTCAACCCCCTCCTGCAAAACGACACTCACCCCTAATCTTCCCGAACCCATCCCGGAACACCACCACCCCGACGACCTCAAGGTCATGCTCGTCGCCGACCTCCTCCTCCTCGGCTCCGACTCCGGCTACTTCAACCTCCTCTTTCGAGACTACTACCTCTCCAAGTTCTTCACGAAATCTTTCCACACTCTGAAGCCCGATATGCTGCTGGTTTTGGGCGATATCTCGGCGCGGGGTCACAATTTGCCGAAAACCAAGTACGTTTCGGTGATCCACCAGTTTCACAGGGTACTGGGTCCGTTTCTGGGGCTGCCGCTCCACGTTGTGCTTGGAGACCGGGATATCGGAGAATGCGATGAGCTGAGTGCGGAGTCGGTGAGTTGGGTTTCGAGGAGGTTGCCGGGTCTGGACTCCGCCGGCTGCGGAGCTTTCGAAATCGGAAATGTGAGCTTTGTGTCGCTTAGTGCGGTGGCGTTGCTTTGTGGGAACAATGAGCTGAGGTTCAGTGTGGAGAAGGTGGTGGAGAGAGAAAGCATGGATTTTCAGATGGAGAGGGAGAGAGTGAATGAGGGAGGGGATGAAAACGACCGATTAGGAAAGAGGGTTTATCAGTTTGGGTGGAGAGAGAATGCTATGTTATCTGGGTCCGGTCCTGTGCTCTTGCTTCACTTCCCATTAAACCGGAATGTGAATGCCGCTAACAATGGTGGGAGTTCAAGCATATTGGATGGCAGGGGGCCTGTTGGTACAGGGCCATACAAGTTGTCGCACAAGCTACCGCTAAATGCTACGGAGTATATCTTTCAAGCTCTCAAACCAAGGATTGTCTTCAGCGCTCACACCCAAGAATTCTATGATCACTTCCATCCAGATGGAACGCGCGAGGTGACTGTTCCGGCCATGACGTGGAATGCAAGGGACGATCCTGGATTTGTTGTTGCCATTTTCCGGGGGAACAAAGGAGCAGTAAGCGTCAGCTATTGCTCACTTGCGAGGGAATCTCACGTTCTTATTGCCTATGTATCTCTTCTGATTCTTTTGTTATCAACGATAATTTTCTCAACACCTACTCCGAGATGTTTAAGACAACGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos

Protein Analysis

389

Amino Acids

43.13

Weight (kDa)

6.54

Isoelectric Point (pI)

25.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0013686)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g37850 FvH4_5g37850
malus_domestica MD15G1365100.v1.1
prunus_persica Prupe.1G513100_v2.0.a1
pyrus_communis pycom15g32740
rosa_chinensis RchiOBHm_Chr7g0239831
rosa_laevigata RLG00000000727
rosa_multiflora Rmu_sc0000540.1_g000066 Rmu_sc0007193.1_g000009
rosa_roxburghii Rroxscaffold_3G00220780
rosa_rugosa Rorug07G0329600 Rorug07G0329700 Rorug07G0329800
rosa_samantha Rh7AG483800 Rh7BG456800 Rh7CG501300 Rh7DG469500
rosa_wichuraiana Rw7G040580

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 152
AccB7I CCANNNNNTGG 1 cut(s) 978
AccBSI CCGCTC 1 cut(s) 388
AccI GTMKAC 1 cut(s) 57
AccII CGCG 3 cut(s) 304, 952, 954
AciI CCGC 9 cut(s) 29, 304, 386, 440, 486, 495, 539, 768, 851
AclWI GGATC 2 cut(s) 337, 989
AcoI YGGCCR 1 cut(s) 969
AcsI RAATTY 1 cut(s) 920
AcuI CTGAAG 2 cut(s) 284, 886
AdeI CACNNNGTG 1 cut(s) 397
AfaI GTAC 3 cut(s) 332, 363, 820
AfeI AGCGCT 1 cut(s) 907
AfiI CCNNNNNNNGG 3 cut(s) 377, 978, 1020
AgsI TTSAA 3 cut(s) 205, 789, 878
AjiI CACGTC 1 cut(s) 978
AjnI CCWGG 1 cut(s) 997
AluBI AGCT 8 cut(s) 47, 433, 500, 522, 568, 847, 881, 1050
AluI AGCT 8 cut(s) 47, 433, 500, 522, 568, 847, 881, 1050
Alw21I GWGCWC 1 cut(s) 732
Alw26I GTCTC 4 cut(s) 46, 76, 213, 399
AlwI GGATC 2 cut(s) 337, 989
Aor51HI AGCGCT 1 cut(s) 907
AoxI GGCC 3 cut(s) 809, 824, 969
ApeKI GCWGC 3 cut(s) 277, 382, 492
ApoI RAATTY 1 cut(s) 920
ArsI GACNNNNNNTTYG 2 cut(s) 54, 86
Asp700I GAANNNNTTC 1 cut(s) 251
AspLEI GCGC 3 cut(s) 304, 908, 954
AspS9I GGNCC 5 cut(s) 368, 717, 722, 809, 824
AsuC2I CCSGG 4 cut(s) 125, 410, 474, 1022
AsuHPI GGTGA 4 cut(s) 91, 352, 460, 970
AsuII TTCGAA 1 cut(s) 504
AvaII GGWCC 3 cut(s) 368, 717, 722
BbsI GAAGAC 1 cut(s) 892
Bbv12I GWGCWC 1 cut(s) 732
BbvCI CCTCAGC 1 cut(s) 569
BbvI GCAGC 3 cut(s) 264, 369, 479
BccI CCATC 5 cut(s) 128, 613, 794, 938, 945
BceAI ACGGC 1 cut(s) 4
BcgI CGANNNNNNTGC 2 cut(s) 451, 485
BciT130I CCWGG 1 cut(s) 999
BclI TGATCA 1 cut(s) 928
BcnI CCSGG 4 cut(s) 125, 410, 474, 1022
BcoDI GTCTC 4 cut(s) 46, 76, 213, 399
BfoI RGCGCY 1 cut(s) 909
BisI GCNGC 6 cut(s) 29, 278, 383, 386, 493, 768
BlsI GCNGC 6 cut(s) 30, 279, 384, 387, 494, 769
Bme1390I CCNGG 5 cut(s) 125, 410, 474, 999, 1022
Bme18I GGWCC 3 cut(s) 368, 717, 722
BmgBI CACGTC 1 cut(s) 978
BmgT120I GGNCC 5 cut(s) 368, 717, 722, 809, 824
BmiI GGNNCC 4 cut(s) 187, 369, 718, 810
BmrFI CCNGG 5 cut(s) 125, 410, 474, 999, 1022
BmrI ACTGGG 1 cut(s) 374
BmuI ACTGGG 1 cut(s) 374
BpiI GAAGAC 1 cut(s) 892
BplI GAGNNNNNCTC 4 cut(s) 56, 88, 1057, 1089
Bpu10I CCTNAGC 1 cut(s) 569
Bpu14I TTCGAA 1 cut(s) 504
BpuEI CTTGAG 1 cut(s) 134
BpuMI CCSGG 4 cut(s) 125, 410, 474, 1022
BsaI GGTCTC 2 cut(s) 76, 399
BsaJI CCNNGG 3 cut(s) 181, 890, 1021
BsaWI WCCGGW 2 cut(s) 719, 753
BsaXI ACNNNNNCTCC 4 cut(s) 215, 245, 1126, 1156
Bsc4I CCNNNNNNNGG 3 cut(s) 377, 978, 1020
Bse118I RCCGGY 1 cut(s) 488
Bse1I ACTGG 2 cut(s) 349, 369
BseBI CCWGG 1 cut(s) 999
BseDI CCNNGG 3 cut(s) 181, 890, 1021
BseGI GGATG 4 cut(s) 120, 655, 805, 937
BseLI CCNNNNNNNGG 3 cut(s) 377, 978, 1020
BseMII CTCAG 3 cut(s) 57, 425, 560
BseNI ACTGG 2 cut(s) 349, 369
BseRI GAGGAG 5 cut(s) 164, 167, 170, 200, 478
BseXI GCAGC 3 cut(s) 264, 369, 479
Bsh1236I CGCG 3 cut(s) 304, 952, 954
Bsh1285I CGRYCG 1 cut(s) 661
BshFI GGCC 3 cut(s) 811, 826, 971
BsiEI CGRYCG 1 cut(s) 661
BsiHKAI GWGCWC 1 cut(s) 732
BsiSI CCGG 9 cut(s) 125, 195, 409, 473, 489, 720, 754, 968, 1021
BslFI GGGAC 1 cut(s) 1004
BslI CCNNNNNNNGG 3 cut(s) 377, 978, 1020
BsmAI GTCTC 4 cut(s) 46, 76, 213, 399
BsmFI GGGAC 1 cut(s) 1004
BsmI GAATGC 4 cut(s) 428, 706, 769, 988
BsnI GGCC 3 cut(s) 811, 826, 971
Bso31I GGTCTC 2 cut(s) 76, 399
Bsp119I TTCGAA 1 cut(s) 504
Bsp1286I GDGCHC 1 cut(s) 732
Bsp143I GATC 3 cut(s) 342, 928, 994
BspACI CCGC 9 cut(s) 29, 304, 386, 440, 486, 495, 539, 768, 851
BspANI GGCC 3 cut(s) 811, 826, 971
BspCNI CTCAG 3 cut(s) 56, 426, 561
BspFNI CGCG 3 cut(s) 304, 952, 954
BspLI GGNNCC 4 cut(s) 187, 369, 718, 810
BspPI GGATC 2 cut(s) 337, 989
BspT104I TTCGAA 1 cut(s) 504
BspTNI GGTCTC 2 cut(s) 76, 399
BsrBI CCGCTC 1 cut(s) 388
BsrFI RCCGGY 1 cut(s) 488
BsrI ACTGG 2 cut(s) 349, 369
BssAI RCCGGY 1 cut(s) 488
BssECI CCNNGG 3 cut(s) 181, 890, 1021
BssMI GATC 3 cut(s) 342, 928, 994
BssT1I CCWWGG 1 cut(s) 890
Bst2UI CCWGG 1 cut(s) 999
Bst4CI ACNGT 1 cut(s) 964
Bst6I CTCTTC 2 cut(s) 57, 1104
BstBI TTCGAA 1 cut(s) 504
BstC8I GCNNGC 1 cut(s) 490
BstDEI CTNAG 4 cut(s) 43, 434, 533, 569
BstF5I GGATG 4 cut(s) 120, 655, 805, 937
BstFNI CGCG 3 cut(s) 304, 952, 954
BstH2I RGCGCY 1 cut(s) 909
BstHHI GCGC 3 cut(s) 304, 908, 954
BstKTI GATC 3 cut(s) 345, 931, 997
BstMAI GTCTC 4 cut(s) 46, 76, 213, 399
BstMBI GATC 3 cut(s) 342, 928, 994
BstMCI CGRYCG 1 cut(s) 661
BstMWI GCNNNNNNNGC 3 cut(s) 25, 44, 274
BstNI CCWGG 1 cut(s) 999
BstSCI CCNGG 5 cut(s) 123, 408, 472, 997, 1020
BstUI CGCG 3 cut(s) 304, 952, 954
BstV1I GCAGC 3 cut(s) 264, 369, 479
BstV2I GAAGAC 1 cut(s) 892
BstXI CCANNNNNNTGG 1 cut(s) 944
BsuRI GGCC 3 cut(s) 811, 826, 971
BtgZI GCGATG 1 cut(s) 441
BtrI CACGTC 1 cut(s) 978
BtsCI GGATG 4 cut(s) 120, 655, 805, 937
BtsIMutI CAGTG 1 cut(s) 583
Cac8I GCNNGC 1 cut(s) 490
CfoI GCGC 3 cut(s) 304, 908, 954
Cfr10I RCCGGY 1 cut(s) 488
Cfr13I GGNCC 5 cut(s) 368, 717, 722, 809, 824
CseI GACGC 1 cut(s) 1033
Csp6I GTAC 3 cut(s) 331, 362, 819
CviAII CATG 3 cut(s) 157, 607, 973
CviQI GTAC 3 cut(s) 331, 362, 819
DdeI CTNAG 4 cut(s) 43, 434, 533, 569
DpnI GATC 3 cut(s) 344, 930, 996
DpnII GATC 3 cut(s) 342, 928, 994
DraIII CACNNNGTG 1 cut(s) 397
DrdI GACNNNNNNGTC 1 cut(s) 152
DseDI GACNNNNNNGTC 1 cut(s) 152
EaeI YGGCCR 1 cut(s) 969
Eam1104I CTCTTC 2 cut(s) 57, 1104
EarI CTCTTC 2 cut(s) 57, 1104
EciI GGCGGA 1 cut(s) 475
Eco130I CCWWGG 1 cut(s) 890
Eco31I GGTCTC 2 cut(s) 76, 399
Eco32I GATATC 2 cut(s) 295, 415
Eco47I GGWCC 3 cut(s) 368, 717, 722
Eco47III AGCGCT 1 cut(s) 907
Eco57I CTGAAG 2 cut(s) 284, 886
EcoO109I RGGNCCY 1 cut(s) 809
EcoRI GAATTC 1 cut(s) 920
EcoRII CCWGG 1 cut(s) 997
EcoRV GATATC 2 cut(s) 295, 415
EcoT14I CCWWGG 1 cut(s) 890
ErhI CCWWGG 1 cut(s) 890
FaeI CATG 3 cut(s) 160, 610, 976
FaqI GGGAC 1 cut(s) 1004
FatI CATG 3 cut(s) 156, 606, 972
FauI CCCGC 1 cut(s) 297
FbaI TGATCA 1 cut(s) 928
FblI GTMKAC 1 cut(s) 57
Fnu4HI GCNGC 6 cut(s) 29, 278, 383, 386, 493, 768
FokI GGATG 4 cut(s) 107, 662, 812, 924
Fsp4HI GCNGC 6 cut(s) 29, 278, 383, 386, 493, 768
GlaI GCGC 3 cut(s) 303, 907, 953
GluI GCNGC 6 cut(s) 29, 278, 383, 386, 493, 768
HaeII RGCGCY 1 cut(s) 909
HaeIII GGCC 3 cut(s) 811, 826, 971
HapII CCGG 9 cut(s) 125, 195, 409, 473, 489, 720, 754, 968, 1021
HgaI GACGC 1 cut(s) 1033
HhaI GCGC 3 cut(s) 304, 908, 954
Hin1II CATG 3 cut(s) 160, 610, 976
Hin6I GCGC 3 cut(s) 302, 906, 952
HinP1I GCGC 3 cut(s) 302, 906, 952
HinfI GANTC 5 cut(s) 191, 443, 482, 1070, 1105
HpaII CCGG 9 cut(s) 125, 195, 409, 473, 489, 720, 754, 968, 1021
HphI GGTGA 4 cut(s) 91, 352, 460, 970
Hpy166II GTNNAC 1 cut(s) 58
Hpy188I TCNGA 7 cut(s) 190, 264, 419, 512, 618, 1104, 1146
Hpy188III TCNNGA 5 cut(s) 113, 218, 244, 479, 941
Hpy8I GTNNAC 1 cut(s) 58
Hpy99I CGWCG 2 cut(s) 146, 167
HpyAV CCTTC 1 cut(s) 580
HpyCH4III ACNGT 1 cut(s) 964
HpyCH4IV ACGT 4 cut(s) 333, 393, 977, 1077
HpyCH4V TGCA 2 cut(s) 87, 986
HpyF10VI GCNNNNNNNGC 3 cut(s) 25, 44, 274
HpyF3I CTNAG 4 cut(s) 43, 434, 533, 569
HpySE526I ACGT 4 cut(s) 333, 393, 977, 1077
Hsp92II CATG 3 cut(s) 160, 610, 976
HspAI GCGC 3 cut(s) 302, 906, 952
KroI GCCGGC 1 cut(s) 488
KroNI GCCGGC 1 cut(s) 490
Ksp22I TGATCA 1 cut(s) 928
Kzo9I GATC 3 cut(s) 342, 928, 994
LmnI GCTCC 4 cut(s) 191, 393, 497, 1034
Lsp1109I GCAGC 3 cut(s) 264, 369, 479
MaeII ACGT 4 cut(s) 333, 393, 977, 1077
MaeIII GTNAC 2 cut(s) 308, 958
MalI GATC 3 cut(s) 344, 930, 996
MbiI CCGCTC 1 cut(s) 388
MboI GATC 3 cut(s) 342, 928, 994
MboII GAAGA 5 cut(s) 74, 101, 232, 892, 1091
MhlI GDGCHC 1 cut(s) 732
MluCI AATT 3 cut(s) 313, 920, 1125
MlyI GAGTC 3 cut(s) 185, 452, 476
MmeI TCCRAC 1 cut(s) 213
MroNI GCCGGC 1 cut(s) 488
MroXI GAANNNNTTC 1 cut(s) 251
MseI TTAA 2 cut(s) 749, 1154
MslI CAYNNNNRTG 1 cut(s) 942
MspI CCGG 9 cut(s) 125, 195, 409, 473, 489, 720, 754, 968, 1021
MspR9I CCNGG 5 cut(s) 125, 410, 474, 999, 1022
Mva1269I GAATGC 4 cut(s) 428, 706, 769, 988
MvaI CCWGG 1 cut(s) 999
MvnI CGCG 3 cut(s) 304, 952, 954
MwoI GCNNNNNNNGC 3 cut(s) 25, 44, 274
NaeI GCCGGC 1 cut(s) 490
NciI CCSGG 4 cut(s) 125, 410, 474, 1022
NdeII GATC 3 cut(s) 342, 928, 994
NgoMIV GCCGGC 1 cut(s) 488
NlaIII CATG 3 cut(s) 160, 610, 976
NlaIV GGNNCC 4 cut(s) 187, 369, 718, 810
NmeAIII GCCGAG 2 cut(s) 162, 278
NmuCI GTSAC 2 cut(s) 308, 958
NspV TTCGAA 1 cut(s) 504
PcsI WCGNNNNNNNCGW 2 cut(s) 17, 423
PctI GAATGC 4 cut(s) 428, 706, 769, 988
PdiI GCCGGC 1 cut(s) 490
PdmI GAANNNNTTC 1 cut(s) 251
PfeI GAWTC 2 cut(s) 1070, 1105
PflMI CCANNNNNTGG 1 cut(s) 978
PfoI TCCNGGA 2 cut(s) 123, 997
PkrI GCNGC 6 cut(s) 30, 279, 384, 387, 494, 769
PleI GAGTC 3 cut(s) 185, 451, 476
PpsI GAGTC 3 cut(s) 185, 451, 476
Psp6I CCWGG 1 cut(s) 997
PspGI CCWGG 1 cut(s) 997
PspN4I GGNNCC 4 cut(s) 187, 369, 718, 810
PspPI GGNCC 5 cut(s) 368, 717, 722, 809, 824
RsaI GTAC 3 cut(s) 332, 363, 820
RsaNI GTAC 3 cut(s) 331, 362, 819
RseI CAYNNNNRTG 1 cut(s) 942
SaqAI TTAA 2 cut(s) 749, 1154
SatI GCNGC 6 cut(s) 29, 278, 383, 386, 493, 768
Sau3AI GATC 3 cut(s) 342, 928, 994
Sau96I GGNCC 5 cut(s) 368, 717, 722, 809, 824
SchI GAGTC 3 cut(s) 185, 452, 476
ScrFI CCNGG 5 cut(s) 125, 410, 474, 999, 1022
SduI GDGCHC 1 cut(s) 732
SfuI TTCGAA 1 cut(s) 504
SinI GGWCC 3 cut(s) 368, 717, 722
SmiMI CAYNNNNRTG 1 cut(s) 942
SmlI CTYRAG 1 cut(s) 149
SmoI CTYRAG 1 cut(s) 149
Sse9I AATT 3 cut(s) 313, 920, 1125
SsiI CCGC 9 cut(s) 29, 304, 386, 440, 486, 495, 539, 768, 851
StyD4I CCNGG 5 cut(s) 123, 408, 472, 997, 1020
StyI CCWWGG 1 cut(s) 890
TaaI ACNGT 1 cut(s) 964
TaiI ACGT 4 cut(s) 336, 396, 980, 1080
TaqI TCGA 3 cut(s) 217, 461, 504
TaqII GACCGA 1 cut(s) 675
TasI AATT 3 cut(s) 313, 920, 1125
TauI GCSGC 3 cut(s) 31, 388, 770
TfiI GAWTC 2 cut(s) 1070, 1105
Tru1I TTAA 2 cut(s) 749, 1154
Tru9I TTAA 2 cut(s) 749, 1154
TscAI CASTG 1 cut(s) 583
TseFI GTSAC 2 cut(s) 308, 958
TseI GCWGC 3 cut(s) 277, 382, 492
Tsp45I GTSAC 2 cut(s) 308, 958
TspDTI ATGAA 1 cut(s) 666
TspGWI ACGGA 2 cut(s) 360, 878
TspRI CASTG 1 cut(s) 583
Van91I CCANNNNNTGG 1 cut(s) 978
VpaK11BI GGWCC 3 cut(s) 368, 717, 722
XapI RAATTY 1 cut(s) 920
XcmI CCANNNNNNNNNTGG 1 cut(s) 398
XmiI GTMKAC 1 cut(s) 57
XmnI GAANNNNTTC 1 cut(s) 251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.