Prupe.1G552500_v2.0.a1

Protein ABCI7, chloroplastic-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
45152257 .. 45154767
2511 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G552500.1

Sequence Viewer

Length: 1449 bp
ATGGCTGCCATATCATTCACACCCCACGTTCAAAGACCTCCGATACCTTTACTTTCCAAGCCCAGAACCCTTATAACCAAACCCAGAGTTTCAACTCAAGCTTCTCCAACCTCACAGCTGGCCTTATCAGACCCCTTTGTTCTTCAACTAGCTGAAGCTCTCGAAGACTCGCTACCCTCTTCTTCTTCTTCTTCACCTCCTTTACCTCTCCAAAATCTAAGAGACTCTTCCTCTGAGGCCCTCCTCTCAACCCCATGGCCTTCTCGCAAAGACGAGCCCTTTCGCTTCACAGACACCTCCTTCATCAAGAACTCCCAAATCCAACCAATCTCTCGCCCACCGAGCTTTCCAAGCATTTTGGAAGATACCCATTTCCCAACTCTAGTTATAGTTGATGGGTTTGTCATAAATTTCTCAAATTTGACCGAATTGCCAAATGGGGTTTATGTGGGTAGCTTGCTGGAGCTCTCAGAAGAGACCATTATGAAAAGGGTCTCTGAGTTTGTGTCTAGTCGTTGTGATGGAGACTTATTTTGGTCCATTAATGGAATTGGGGCTCCCGATTTGACAGTGATTTATGTACCATCCGGGTGCCGGGTGGAGGCTCCAGTTTATCTGCGGTACTTTGCTAATGAGGGCGGAGATGAGGGGTCGAATAAACTCCCGTTATCGAATCCGAGGGTGCTTGTGTTGGTGGAGAAGGGAGGGGAGATTGGTATAATTGAGGAGTTCTTGGGTGGGGATGGTGACAAGTGTTATTGGGCGAATTCTGTTTTTGAGGTAGTGGTTCGAGAAGGAGGAAAAGTTAGGCATTCTTATGTTCAGAATCAATCTTTGAATGCTGCCCACATAAAGTGGACTTGGGTCCGCCAGGAATCAGCTAGTACATATGAGCTTGTAGAGGTTAGTACTGGTGGAAAATTGAGCAGGCATAATCTCCATGTTCAGCAACTGGGACCAGACACAATCACCGAGTTATCAACATTGCACTTGTCTGTCGGTGATCAGACACAAGATCTACATAGTAGCATAGTCTTGGACCATCCACGGGGTTATTCCAGACAACTTCATAAATGCATTGTGTCTCATTCTCTAGGACAAGCCGTATTTGATGGGAACATAAAGGTCAACAGATATGCTCAGCAAACAGATGGAGGGCAGCTGACAAGAAGTCTTCTTCTTGCACCTCGTGCAACTGTAAATGTCAAACCCAATCTTCAAATTATTGCTGATGATGTCAAGTGTTCGCATGGAGCTGCAATTAGCGACCTAGAAGAAAGCCAACTCTTCTATTTCCAGGCACGTGGCATTGACTTAGAGGCAGCGAGAAAGGCTCTCCTATTTTCCTTTGGTGCAGAGGTGATCGAAAGATTACCTTACGCTTGGATGAAGAAGAACGTAGAAAGTCAAATTAAAGAATTGTTGGATCCTACTAATAAAGGATCATAA

Protein Analysis

483

Amino Acids

53.1

Weight (kDa)

5.7

Isoelectric Point (pI)

42.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 74
AccB1I GGYRCC 1 cut(s) 591
AciI CCGC 3 cut(s) 619, 639, 868
AclWI GGATC 2 cut(s) 1421, 1434
AcsI RAATTY 3 cut(s) 409, 418, 766
AcuI CTGAAG 1 cut(s) 174
AcvI CACGTG 1 cut(s) 1304
AdeI CACNNNGTG 1 cut(s) 1190
AfaI GTAC 4 cut(s) 582, 623, 886, 910
AfiI CCNNNNNNNGG 3 cut(s) 594, 601, 1048
AgsI TTSAA 5 cut(s) 32, 93, 146, 838, 1220
AhdI GACNNNNNGTC 1 cut(s) 1170
AjnI CCWGG 2 cut(s) 870, 1296
Alw21I GWGCWC 1 cut(s) 468
Alw26I GTCTC 5 cut(s) 216, 470, 499, 519, 1089
AlwI GGATC 2 cut(s) 1421, 1434
AlwNI CAGNNNCTG 1 cut(s) 952
AoxI GGCC 3 cut(s) 120, 237, 257
ApeKI GCWGC 5 cut(s) 5, 842, 1159, 1256, 1322
ApoI RAATTY 3 cut(s) 409, 418, 766
AseI ATTAAT 1 cut(s) 543
AspS9I GGNCC 5 cut(s) 238, 537, 865, 956, 1039
AsuC2I CCSGG 2 cut(s) 589, 596
AsuHPI GGTGA 5 cut(s) 186, 758, 961, 1013, 1372
AvaII GGWCC 4 cut(s) 537, 865, 956, 1039
BamHI GGATCC 1 cut(s) 1426
BanI GGYRCC 1 cut(s) 591
BanII GRGCYC 3 cut(s) 279, 468, 559
BarI GAAGNNNNNNTAC 2 cut(s) 156, 188
BauI CACGAG 1 cut(s) 1188
BbrPI CACGTG 1 cut(s) 1304
BbsI GAAGAC 2 cut(s) 171, 1166
Bbv12I GWGCWC 1 cut(s) 468
BbvI GCAGC 4 cut(s) 829, 1171, 1243, 1334
BccI CCATC 7 cut(s) 389, 515, 592, 737, 1050, 1106, 1145
BceAI ACGGC 1 cut(s) 1088
BciT130I CCWGG 2 cut(s) 872, 1298
BclI TGATCA 1 cut(s) 1003
BcnI CCSGG 2 cut(s) 589, 596
BcoDI GTCTC 5 cut(s) 216, 470, 499, 519, 1089
BfaI CTAG 6 cut(s) 149, 383, 510, 882, 1094, 1271
BglII AGATCT 1 cut(s) 1015
BisI GCNGC 5 cut(s) 6, 843, 1160, 1257, 1323
BlpI GCTNAGC 1 cut(s) 1140
BlsI GCNGC 5 cut(s) 7, 844, 1161, 1258, 1324
BmcAI AGTACT 1 cut(s) 910
Bme1390I CCNGG 4 cut(s) 589, 596, 872, 1298
Bme18I GGWCC 4 cut(s) 537, 865, 956, 1039
BmeRI GACNNNNNGTC 1 cut(s) 1170
BmgT120I GGNCC 5 cut(s) 238, 537, 865, 956, 1039
BmiI GGNNCC 6 cut(s) 558, 593, 606, 866, 957, 1428
BmrFI CCNGG 4 cut(s) 589, 596, 872, 1298
BmrI ACTGGG 1 cut(s) 962
BmuI ACTGGG 1 cut(s) 962
BoxI GACNNNNGTC 1 cut(s) 863
BpiI GAAGAC 2 cut(s) 171, 1166
BplI GAGNNNNNCTC 2 cut(s) 1318, 1350
BpmI CTGGAG 2 cut(s) 482, 591
Bpu1102I GCTNAGC 1 cut(s) 1140
BpuEI CTTGAG 1 cut(s) 81
BpuMI CCSGG 2 cut(s) 589, 596
BsaAI YACGTR 1 cut(s) 1304
BsaI GGTCTC 2 cut(s) 470, 499
BsaJI CCNNGG 3 cut(s) 254, 677, 1046
BsaXI ACNNNNNCTCC 2 cut(s) 789, 819
Bsc4I CCNNNNNNNGG 3 cut(s) 594, 601, 1048
Bse1I ACTGG 3 cut(s) 608, 916, 957
Bse3DI GCAATG 1 cut(s) 983
BseBI CCWGG 2 cut(s) 872, 1298
BseDI CCNNGG 3 cut(s) 254, 677, 1046
BseGI GGATG 4 cut(s) 584, 748, 1042, 1392
BseLI CCNNNNNNNGG 3 cut(s) 594, 601, 1048
BseMI GCAATG 1 cut(s) 983
BseMII CTCAG 4 cut(s) 225, 483, 489, 1154
BseNI ACTGG 3 cut(s) 608, 916, 957
BseRI GAGGAG 2 cut(s) 233, 740
BseXI GCAGC 4 cut(s) 829, 1171, 1243, 1334
BsgI GTGCAG 1 cut(s) 1374
BshFI GGCC 3 cut(s) 122, 239, 259
BshNI GGYRCC 1 cut(s) 591
BsiHKAI GWGCWC 1 cut(s) 468
BsiSI CCGG 2 cut(s) 588, 595
BslFI GGGAC 1 cut(s) 969
BslI CCNNNNNNNGG 3 cut(s) 594, 601, 1048
BsmAI GTCTC 5 cut(s) 216, 470, 499, 519, 1089
BsmFI GGGAC 1 cut(s) 969
BsmI GAATGC 2 cut(s) 811, 844
BsnI GGCC 3 cut(s) 122, 239, 259
Bso31I GGTCTC 2 cut(s) 470, 499
Bsp1286I GDGCHC 3 cut(s) 279, 468, 559
Bsp143I GATC 5 cut(s) 1003, 1015, 1362, 1426, 1442
Bsp1720I GCTNAGC 1 cut(s) 1140
Bsp19I CCATGG 1 cut(s) 254
BspACI CCGC 3 cut(s) 619, 639, 868
BspANI GGCC 3 cut(s) 122, 239, 259
BspCNI CTCAG 4 cut(s) 226, 482, 490, 1153
BspLI GGNNCC 6 cut(s) 558, 593, 606, 866, 957, 1428
BspPI GGATC 2 cut(s) 1421, 1434
BspT107I GGYRCC 1 cut(s) 591
BspTNI GGTCTC 2 cut(s) 470, 499
BsrDI GCAATG 1 cut(s) 983
BsrI ACTGG 3 cut(s) 608, 916, 957
BssECI CCNNGG 3 cut(s) 254, 677, 1046
BssMI GATC 5 cut(s) 1003, 1015, 1362, 1426, 1442
BssSI CACGAG 1 cut(s) 1188
BssT1I CCWWGG 1 cut(s) 254
Bst2BI CACGAG 1 cut(s) 1188
Bst2UI CCWGG 2 cut(s) 872, 1298
Bst4CI ACNGT 2 cut(s) 571, 1198
Bst6I CTCTTC 4 cut(s) 184, 232, 468, 1292
BstAPI GCANNNNNTGC 1 cut(s) 1190
BstBAI YACGTR 1 cut(s) 1304
BstC8I GCNNGC 3 cut(s) 120, 458, 929
BstDEI CTNAG 6 cut(s) 218, 234, 469, 498, 1140, 1315
BstDSI CCRYGG 2 cut(s) 254, 1046
BstF5I GGATG 4 cut(s) 584, 748, 1042, 1392
BstKTI GATC 5 cut(s) 1006, 1018, 1365, 1429, 1445
BstMAI GTCTC 5 cut(s) 216, 470, 499, 519, 1089
BstMBI GATC 5 cut(s) 1003, 1015, 1362, 1426, 1442
BstMWI GCNNNNNNNGC 4 cut(s) 342, 351, 1190, 1331
BstNI CCWGG 2 cut(s) 872, 1298
BstPAI GACNNNNGTC 1 cut(s) 863
BstSCI CCNGG 4 cut(s) 587, 594, 870, 1296
BstV1I GCAGC 4 cut(s) 829, 1171, 1243, 1334
BstV2I GAAGAC 2 cut(s) 171, 1166
BstX2I RGATCY 2 cut(s) 1015, 1426
BstXI CCANNNNNNTGG 1 cut(s) 1304
BstYI RGATCY 2 cut(s) 1015, 1426
BsuRI GGCC 3 cut(s) 122, 239, 259
BtgI CCRYGG 2 cut(s) 254, 1046
BtsCI GGATG 4 cut(s) 584, 748, 1042, 1392
BtsIMutI CAGTG 1 cut(s) 576
Cac8I GCNNGC 3 cut(s) 120, 458, 929
CaiI CAGNNNCTG 1 cut(s) 952
Cfr13I GGNCC 5 cut(s) 238, 537, 865, 956, 1039
Csp6I GTAC 4 cut(s) 581, 622, 885, 909
CviAII CATG 3 cut(s) 255, 941, 1250
CviQI GTAC 4 cut(s) 581, 622, 885, 909
DdeI CTNAG 6 cut(s) 218, 234, 469, 498, 1140, 1315
DpnI GATC 5 cut(s) 1005, 1017, 1364, 1428, 1444
DpnII GATC 5 cut(s) 1003, 1015, 1362, 1426, 1442
DraIII CACNNNGTG 1 cut(s) 1190
DriI GACNNNNNGTC 1 cut(s) 1170
Eam1104I CTCTTC 4 cut(s) 184, 232, 468, 1292
Eam1105I GACNNNNNGTC 1 cut(s) 1170
EarI CTCTTC 4 cut(s) 184, 232, 468, 1292
EciI GGCGGA 2 cut(s) 654, 857
Ecl136II GAGCTC 1 cut(s) 466
Eco130I CCWWGG 1 cut(s) 254
Eco24I GRGCYC 3 cut(s) 279, 468, 559
Eco31I GGTCTC 2 cut(s) 470, 499
Eco47I GGWCC 4 cut(s) 537, 865, 956, 1039
Eco53kI GAGCTC 1 cut(s) 466
Eco57I CTGAAG 1 cut(s) 174
Eco72I CACGTG 1 cut(s) 1304
EcoICRI GAGCTC 1 cut(s) 466
EcoO109I RGGNCCY 1 cut(s) 238
EcoRI GAATTC 1 cut(s) 766
EcoRII CCWGG 2 cut(s) 870, 1296
EcoT14I CCWWGG 1 cut(s) 254
EcoT22I ATGCAT 1 cut(s) 1079
EcoT38I GRGCYC 3 cut(s) 279, 468, 559
ErhI CCWWGG 1 cut(s) 254
FaeI CATG 3 cut(s) 258, 944, 1253
FalI AAGNNNNNCTT 4 cut(s) 211, 243, 1360, 1392
FaqI GGGAC 1 cut(s) 969
FatI CATG 3 cut(s) 254, 940, 1249
FauNDI CATATG 1 cut(s) 889
FbaI TGATCA 1 cut(s) 1003
Fnu4HI GCNGC 5 cut(s) 6, 843, 1160, 1257, 1323
FokI GGATG 4 cut(s) 571, 755, 1029, 1399
FriOI GRGCYC 3 cut(s) 279, 468, 559
Fsp4HI GCNGC 5 cut(s) 6, 843, 1160, 1257, 1323
FspBI CTAG 6 cut(s) 149, 383, 510, 882, 1094, 1271
GluI GCNGC 5 cut(s) 6, 843, 1160, 1257, 1323
GsuI CTGGAG 2 cut(s) 482, 591
HaeIII GGCC 3 cut(s) 122, 239, 259
HapII CCGG 2 cut(s) 588, 595
Hin1II CATG 3 cut(s) 258, 944, 1253
HincII GTYRAC 1 cut(s) 1129
HindII GTYRAC 1 cut(s) 1129
HindIII AAGCTT 1 cut(s) 99
HinfI GANTC 5 cut(s) 167, 224, 673, 826, 875
HpaII CCGG 2 cut(s) 588, 595
HphI GGTGA 5 cut(s) 186, 758, 961, 1013, 1372
Hpy166II GTNNAC 2 cut(s) 858, 1129
Hpy188I TCNGA 8 cut(s) 42, 130, 235, 472, 499, 678, 825, 1008
Hpy188III TCNNGA 5 cut(s) 161, 307, 560, 791, 1059
Hpy8I GTNNAC 2 cut(s) 858, 1129
HpyAV CCTTC 4 cut(s) 270, 310, 694, 788
HpyCH4III ACNGT 2 cut(s) 571, 1198
HpyCH4IV ACGT 3 cut(s) 27, 1303, 1398
HpyCH4V TGCA 6 cut(s) 988, 1077, 1184, 1193, 1259, 1355
HpyF10VI GCNNNNNNNGC 4 cut(s) 342, 351, 1190, 1331
HpyF3I CTNAG 6 cut(s) 218, 234, 469, 498, 1140, 1315
HpySE526I ACGT 3 cut(s) 27, 1303, 1398
Hsp92II CATG 3 cut(s) 258, 944, 1253
Ksp22I TGATCA 1 cut(s) 1003
Kzo9I GATC 5 cut(s) 1003, 1015, 1362, 1426, 1442
LmnI GCTCC 4 cut(s) 463, 562, 610, 1253
Lsp1109I GCAGC 4 cut(s) 829, 1171, 1243, 1334
MaeI CTAG 6 cut(s) 149, 383, 510, 882, 1094, 1271
MaeII ACGT 3 cut(s) 27, 1303, 1398
MaeIII GTNAC 1 cut(s) 746
MalI GATC 5 cut(s) 1005, 1017, 1364, 1428, 1444
MboI GATC 5 cut(s) 1003, 1015, 1362, 1426, 1442
MflI RGATCY 2 cut(s) 1015, 1426
MhlI GDGCHC 3 cut(s) 279, 468, 559
MlyI GAGTC 2 cut(s) 161, 218
MmeI TCCRAC 3 cut(s) 131, 346, 1404
Mph1103I ATGCAT 1 cut(s) 1079
MseI TTAA 2 cut(s) 543, 1413
MslI CAYNNNNRTG 2 cut(s) 589, 816
MspA1I CMGCKG 2 cut(s) 118, 1162
MspI CCGG 2 cut(s) 588, 595
MspR9I CCNGG 4 cut(s) 589, 596, 872, 1298
Mva1269I GAATGC 2 cut(s) 811, 844
MvaI CCWGG 2 cut(s) 872, 1298
MwoI GCNNNNNNNGC 4 cut(s) 342, 351, 1190, 1331
NciI CCSGG 2 cut(s) 589, 596
NcoI CCATGG 1 cut(s) 254
NdeI CATATG 1 cut(s) 889
NdeII GATC 5 cut(s) 1003, 1015, 1362, 1426, 1442
NlaIII CATG 3 cut(s) 258, 944, 1253
NlaIV GGNNCC 6 cut(s) 558, 593, 606, 866, 957, 1428
NmuCI GTSAC 1 cut(s) 746
NsiI ATGCAT 1 cut(s) 1079
PctI GAATGC 2 cut(s) 811, 844
PfeI GAWTC 3 cut(s) 673, 826, 875
PkrI GCNGC 5 cut(s) 7, 844, 1161, 1258, 1324
PleI GAGTC 2 cut(s) 161, 218
PmaCI CACGTG 1 cut(s) 1304
PmlI CACGTG 1 cut(s) 1304
PpsI GAGTC 2 cut(s) 161, 218
Ppu21I YACGTR 1 cut(s) 1304
PshAI GACNNNNGTC 1 cut(s) 863
PshBI ATTAAT 1 cut(s) 543
PsiI TTATAA 1 cut(s) 74
Psp124BI GAGCTC 1 cut(s) 468
Psp6I CCWGG 2 cut(s) 870, 1296
PspCI CACGTG 1 cut(s) 1304
PspGI CCWGG 2 cut(s) 870, 1296
PspN4I GGNNCC 6 cut(s) 558, 593, 606, 866, 957, 1428
PspPI GGNCC 5 cut(s) 238, 537, 865, 956, 1039
PstNI CAGNNNCTG 1 cut(s) 952
PsuI RGATCY 2 cut(s) 1015, 1426
PvuII CAGCTG 2 cut(s) 118, 1162
RsaI GTAC 4 cut(s) 582, 623, 886, 910
RsaNI GTAC 4 cut(s) 581, 622, 885, 909
RseI CAYNNNNRTG 2 cut(s) 589, 816
SacI GAGCTC 1 cut(s) 468
SaqAI TTAA 2 cut(s) 543, 1413
SatI GCNGC 5 cut(s) 6, 843, 1160, 1257, 1323
Sau3AI GATC 5 cut(s) 1003, 1015, 1362, 1426, 1442
Sau96I GGNCC 5 cut(s) 238, 537, 865, 956, 1039
ScaI AGTACT 1 cut(s) 910
SchI GAGTC 2 cut(s) 161, 218
ScrFI CCNGG 4 cut(s) 589, 596, 872, 1298
SduI GDGCHC 3 cut(s) 279, 468, 559
SinI GGWCC 4 cut(s) 537, 865, 956, 1039
SmiMI CAYNNNNRTG 2 cut(s) 589, 816
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SsiI CCGC 3 cut(s) 619, 639, 868
SspMI CTAG 6 cut(s) 149, 383, 510, 882, 1094, 1271
SstI GAGCTC 1 cut(s) 468
StyD4I CCNGG 4 cut(s) 587, 594, 870, 1296
StyI CCWWGG 1 cut(s) 254
TaaI ACNGT 2 cut(s) 571, 1198
TaiI ACGT 3 cut(s) 30, 1306, 1401
TaqI TCGA 5 cut(s) 162, 653, 671, 790, 1365
TaqII GACCGA 1 cut(s) 440
TatI WGTACW 2 cut(s) 884, 908
TfiI GAWTC 3 cut(s) 673, 826, 875
Tru1I TTAA 2 cut(s) 543, 1413
Tru9I TTAA 2 cut(s) 543, 1413
TscAI CASTG 1 cut(s) 576
TseFI GTSAC 1 cut(s) 746
TseI GCWGC 5 cut(s) 5, 842, 1159, 1256, 1322
Tsp45I GTSAC 1 cut(s) 746
TspDTI ATGAA 4 cut(s) 292, 500, 1058, 1403
TspRI CASTG 1 cut(s) 576
VpaK11BI GGWCC 4 cut(s) 537, 865, 956, 1039
VspI ATTAAT 1 cut(s) 543
XapI RAATTY 3 cut(s) 409, 418, 766
XspI CTAG 6 cut(s) 149, 383, 510, 882, 1094, 1271
ZrmI AGTACT 1 cut(s) 910
Zsp2I ATGCAT 1 cut(s) 1079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.