pycom09g14240

Protein ABCI7, chloroplastic-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
13680934 .. 13683765
2832 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g14240.3

Sequence Viewer

Length: 1425 bp
ATGGCGGCCATATCATTCACAACCCACATTCAAAGACCTCCGGTACCTTTATTTTCTACACCCAAAACCCCTAAAACAAAACTCAGAGTCTCAACTCAAGCTTCTCCAACTTCACAACTCGCCTTATCAGACCCCTTTGTTCTACAACTAGCTGAAGCTCTTGAAGATTCACTACCTTCTTATACTTCATCTCCTTTACCTTTACAAAATCTCAGAGACTCTTCCTCTGAGGCCCTCCTCTCAACCCCATGGCCGTCTCGCAAAGATGAGCCCTTTCGCTTCACTGACACCTCCTTCATCAAGAACTCCCAAATCCAACCAATCTCTCACCCTCCGACCTTTTCAAGCATTTTGGAAGATACACAAATTCCAAATCTGGTTATAGTTGATGGGTTTGTCGTAAGTTTCTCAAATTTGAGAGAATTGCCGGATGGGGTTTATGTGGGTAGCTTTCAGCAGCTGTCAGAACAGACCGTTATGGAAAGGGTGTCTGAGTTTGTGTCTAGTAGTTGTCCAGGAGACTTATTTTGGTCTATTAATGGAATCGGGGCTCCAGATGTAACTGTGATTTATGTACCTTCTGGGTGCCGTGTAGAGGCTCCAGTTTATCTGCGGTACTTTGCAAACGAGGGCAGTGATGAGGGGTCAAATAAACTGCCGTTAGCGAATCCAAGGGTGCTTGTGTTGGTGGAGAAGGGAGGGGAGATTGGTATAATTGAGGAGTTCTTGGGTGGGGATGGCAACAAGTGTTATTGGACAAATTCTGTTATTGAGGTAGTGGTTGGAGAAGGAGGAAAAGTTACACATTCCTATGTTCAGAATCAATCTCTGAATGCTGCCCATATAAAGTGGACTTGGGTCCGTCAGGAATCAGCTAGTACATATGAGCTTGTGGAGGTTAGTACTGGTGGAAAATTGAGCAGGCATAATCTCCATGTTCAACAACTGGGACCAGACACAGTCACCGAGTTATCAACACTGCAATTGTCTGTCGGTGATCAAACACACGATCTGCATAGTAGTGTAGTCCTGGACCATCCACGGGGTTATTCCAGACAACTTCACAAATGCATCGTGTCTAATTCTCTAGGCCAAGCTGTTTTTGATGGGAACATAAGGGTTAACAGATATGCTCAGCAAACAGACGGTGGGCAGCTGACAAGAAGTCTTCTACTTGCACCTCGTGCAACTGTAAATGTCAAACCGAATCTTCAAATTATTGCTGACGATGTCAAGTGTTCCCATGGATGTGCAATCAGCGACCTAGAAGAAAGCCAGCTCTTCTATTTCCAGGCACGTGGCATCGATGTAGAGGCAGCGAGAAAGGCTCTCCTCTTTTCCTTTGGTGCAGAGAATGGTTCCTGTTGTATCAGAGTTGTCTGTTCATCAGCAATTGAAACCGATGTTTTACGTCATTCGAGATAA

Protein Analysis

475

Amino Acids

51.88

Weight (kDa)

5.5

Isoelectric Point (pI)

43.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 43
AccB1I GGYRCC 2 cut(s) 43, 585
AciI CCGC 2 cut(s) 5, 613
AcoI YGGCCR 2 cut(s) 6, 251
AcsI RAATTY 3 cut(s) 366, 412, 760
AcuI CTGAAG 1 cut(s) 174
AcvI CACGTG 1 cut(s) 1298
AdeI CACNNNGTG 1 cut(s) 1184
AfaI GTAC 5 cut(s) 45, 576, 617, 880, 904
AfiI CCNNNNNNNGG 2 cut(s) 595, 1042
AgsI TTSAA 6 cut(s) 32, 164, 345, 941, 1214, 1397
AhdI GACNNNNNGTC 1 cut(s) 1164
AjnI CCWGG 3 cut(s) 514, 1029, 1290
Alw26I GTCTC 4 cut(s) 94, 210, 261, 513
AlwNI CAGNNNCTG 1 cut(s) 460
AoxI GGCC 4 cut(s) 6, 231, 251, 1090
ApeKI GCWGC 4 cut(s) 457, 836, 1153, 1316
ApoI RAATTY 3 cut(s) 366, 412, 760
AseI ATTAAT 1 cut(s) 537
Asp718I GGTACC 1 cut(s) 43
AspS9I GGNCC 4 cut(s) 232, 859, 950, 1033
AsuHPI GGTGA 3 cut(s) 320, 955, 1007
AvaII GGWCC 3 cut(s) 859, 950, 1033
BanI GGYRCC 2 cut(s) 43, 585
BanII GRGCYC 2 cut(s) 273, 553
BarI GAAGNNNNNNTAC 2 cut(s) 156, 188
BauI CACGAG 1 cut(s) 1182
BbrPI CACGTG 1 cut(s) 1298
BbsI GAAGAC 1 cut(s) 1160
BbvI GCAGC 4 cut(s) 469, 823, 1165, 1328
BccI CCATC 5 cut(s) 383, 425, 731, 1044, 1100
BceAI ACGGC 3 cut(s) 238, 573, 643
BciT130I CCWGG 3 cut(s) 516, 1031, 1292
BclI TGATCA 1 cut(s) 997
BcoDI GTCTC 4 cut(s) 94, 210, 261, 513
BfaI CTAG 5 cut(s) 149, 504, 876, 1088, 1265
BisI GCNGC 5 cut(s) 6, 458, 837, 1154, 1317
BlpI GCTNAGC 1 cut(s) 1134
BlsI GCNGC 5 cut(s) 7, 459, 838, 1155, 1318
BmcAI AGTACT 1 cut(s) 904
Bme1390I CCNGG 3 cut(s) 516, 1031, 1292
Bme18I GGWCC 3 cut(s) 859, 950, 1033
BmeRI GACNNNNNGTC 1 cut(s) 1164
BmgT120I GGNCC 4 cut(s) 232, 859, 950, 1033
BmiI GGNNCC 7 cut(s) 45, 552, 587, 600, 860, 951, 1360
BmrFI CCNGG 3 cut(s) 516, 1031, 1292
BmrI ACTGGG 1 cut(s) 956
BmsI GCATC 2 cut(s) 1080, 1311
BmuI ACTGGG 1 cut(s) 956
BoxI GACNNNNGTC 1 cut(s) 857
BpiI GAAGAC 1 cut(s) 1160
BplI GAGNNNNNCTC 2 cut(s) 1312, 1344
BpmI CTGGAG 2 cut(s) 537, 585
Bpu1102I GCTNAGC 1 cut(s) 1134
BpuEI CTTGAG 1 cut(s) 81
Bsa29I ATCGAT 1 cut(s) 1305
BsaAI YACGTR 1 cut(s) 1298
BsaJI CCNNGG 4 cut(s) 248, 671, 1040, 1243
BsaWI WCCGGW 1 cut(s) 40
BsaXI ACNNNNNCTCC 4 cut(s) 175, 205, 783, 813
Bsc4I CCNNNNNNNGG 2 cut(s) 595, 1042
Bse1I ACTGG 3 cut(s) 602, 910, 951
BseBI CCWGG 3 cut(s) 516, 1031, 1292
BseCI ATCGAT 1 cut(s) 1305
BseDI CCNNGG 4 cut(s) 248, 671, 1040, 1243
BseGI GGATG 4 cut(s) 436, 742, 1036, 1253
BseLI CCNNNNNNNGG 2 cut(s) 595, 1042
BseMII CTCAG 5 cut(s) 97, 219, 226, 483, 1148
BseNI ACTGG 3 cut(s) 602, 910, 951
BseRI GAGGAG 3 cut(s) 227, 734, 1322
BseXI GCAGC 4 cut(s) 469, 823, 1165, 1328
BsgI GTGCAG 1 cut(s) 1368
BshFI GGCC 4 cut(s) 8, 233, 253, 1092
BshNI GGYRCC 2 cut(s) 43, 585
BshVI ATCGAT 1 cut(s) 1305
BsiSI CCGG 2 cut(s) 41, 428
BslFI GGGAC 1 cut(s) 963
BslI CCNNNNNNNGG 2 cut(s) 595, 1042
BsmAI GTCTC 4 cut(s) 94, 210, 261, 513
BsmBI CGTCTC 1 cut(s) 261
BsmFI GGGAC 1 cut(s) 963
BsmI GAATGC 1 cut(s) 838
BsnI GGCC 4 cut(s) 8, 233, 253, 1092
Bsp1286I GDGCHC 2 cut(s) 273, 553
Bsp143I GATC 2 cut(s) 997, 1009
Bsp1720I GCTNAGC 1 cut(s) 1134
Bsp19I CCATGG 2 cut(s) 248, 1243
BspACI CCGC 2 cut(s) 5, 613
BspANI GGCC 4 cut(s) 8, 233, 253, 1092
BspCNI CTCAG 5 cut(s) 96, 220, 225, 484, 1147
BspDI ATCGAT 1 cut(s) 1305
BspLI GGNNCC 7 cut(s) 45, 552, 587, 600, 860, 951, 1360
BspQI GCTCTTC 1 cut(s) 1286
BspT107I GGYRCC 2 cut(s) 43, 585
BsrI ACTGG 3 cut(s) 602, 910, 951
BssECI CCNNGG 4 cut(s) 248, 671, 1040, 1243
BssMI GATC 2 cut(s) 997, 1009
BssSI CACGAG 1 cut(s) 1182
BssT1I CCWWGG 3 cut(s) 248, 671, 1243
Bst2BI CACGAG 1 cut(s) 1182
Bst2UI CCWGG 3 cut(s) 516, 1031, 1292
Bst4CI ACNGT 5 cut(s) 475, 565, 961, 1148, 1192
Bst6I CTCTTC 2 cut(s) 226, 1286
BstAPI GCANNNNNTGC 1 cut(s) 1184
BstBAI YACGTR 1 cut(s) 1298
BstC8I GCNNGC 2 cut(s) 923, 1277
BstDEI CTNAG 5 cut(s) 83, 212, 228, 492, 1134
BstDSI CCRYGG 3 cut(s) 248, 1040, 1243
BstF5I GGATG 4 cut(s) 436, 742, 1036, 1253
BstKTI GATC 2 cut(s) 1000, 1012
BstMAI GTCTC 4 cut(s) 94, 210, 261, 513
BstMBI GATC 2 cut(s) 997, 1009
BstMWI GCNNNNNNNGC 2 cut(s) 1184, 1325
BstNI CCWGG 3 cut(s) 516, 1031, 1292
BstPAI GACNNNNGTC 1 cut(s) 857
BstSCI CCNGG 3 cut(s) 514, 1029, 1290
BstV1I GCAGC 4 cut(s) 469, 823, 1165, 1328
BstV2I GAAGAC 1 cut(s) 1160
BstXI CCANNNNNNTGG 1 cut(s) 1298
Bsu15I ATCGAT 1 cut(s) 1305
BsuRI GGCC 4 cut(s) 8, 233, 253, 1092
BsuTUI ATCGAT 1 cut(s) 1305
BtgI CCRYGG 3 cut(s) 248, 1040, 1243
BtsCI GGATG 4 cut(s) 436, 742, 1036, 1253
BtsI GCAGTG 2 cut(s) 640, 977
BtsIMutI CAGTG 3 cut(s) 282, 640, 977
Cac8I GCNNGC 2 cut(s) 923, 1277
CaiI CAGNNNCTG 1 cut(s) 460
Cfr13I GGNCC 4 cut(s) 232, 859, 950, 1033
ClaI ATCGAT 1 cut(s) 1305
Csp6I GTAC 5 cut(s) 44, 575, 616, 879, 903
CviAII CATG 3 cut(s) 249, 935, 1244
CviQI GTAC 5 cut(s) 44, 575, 616, 879, 903
DdeI CTNAG 5 cut(s) 83, 212, 228, 492, 1134
DpnI GATC 2 cut(s) 999, 1011
DpnII GATC 2 cut(s) 997, 1009
DraIII CACNNNGTG 1 cut(s) 1184
DriI GACNNNNNGTC 1 cut(s) 1164
EaeI YGGCCR 2 cut(s) 6, 251
Eam1104I CTCTTC 2 cut(s) 226, 1286
Eam1105I GACNNNNNGTC 1 cut(s) 1164
EarI CTCTTC 2 cut(s) 226, 1286
Eco130I CCWWGG 3 cut(s) 248, 671, 1243
Eco24I GRGCYC 2 cut(s) 273, 553
Eco47I GGWCC 3 cut(s) 859, 950, 1033
Eco57I CTGAAG 1 cut(s) 174
Eco72I CACGTG 1 cut(s) 1298
EcoO109I RGGNCCY 1 cut(s) 232
EcoRII CCWGG 3 cut(s) 514, 1029, 1290
EcoT14I CCWWGG 3 cut(s) 248, 671, 1243
EcoT22I ATGCAT 1 cut(s) 1073
EcoT38I GRGCYC 2 cut(s) 273, 553
ErhI CCWWGG 3 cut(s) 248, 671, 1243
Esp3I CGTCTC 1 cut(s) 261
FaeI CATG 3 cut(s) 252, 938, 1247
FaqI GGGAC 1 cut(s) 963
FatI CATG 3 cut(s) 248, 934, 1243
FauNDI CATATG 1 cut(s) 883
FbaI TGATCA 1 cut(s) 997
Fnu4HI GCNGC 5 cut(s) 6, 458, 837, 1154, 1317
FokI GGATG 4 cut(s) 443, 749, 1023, 1260
FriOI GRGCYC 2 cut(s) 273, 553
Fsp4HI GCNGC 5 cut(s) 6, 458, 837, 1154, 1317
FspBI CTAG 5 cut(s) 149, 504, 876, 1088, 1265
GluI GCNGC 5 cut(s) 6, 458, 837, 1154, 1317
GsuI CTGGAG 2 cut(s) 537, 585
HaeIII GGCC 4 cut(s) 8, 233, 253, 1092
HapII CCGG 2 cut(s) 41, 428
Hin1II CATG 3 cut(s) 252, 938, 1247
HincII GTYRAC 1 cut(s) 1123
HindII GTYRAC 1 cut(s) 1123
HindIII AAGCTT 1 cut(s) 99
HinfI GANTC 8 cut(s) 87, 167, 218, 543, 667, 820, 869, 1207
HpaI GTTAAC 1 cut(s) 1123
HpaII CCGG 2 cut(s) 41, 428
HphI GGTGA 3 cut(s) 320, 955, 1007
Hpy166II GTNNAC 2 cut(s) 852, 1123
Hpy188III TCNNGA 6 cut(s) 161, 301, 554, 866, 1053, 1419
Hpy8I GTNNAC 2 cut(s) 852, 1123
HpyAV CCTTC 5 cut(s) 186, 304, 588, 688, 782
HpyCH4III ACNGT 5 cut(s) 475, 565, 961, 1148, 1192
HpyCH4IV ACGT 2 cut(s) 1297, 1411
HpyCH4V TGCA 8 cut(s) 623, 982, 1015, 1071, 1178, 1187, 1253, 1349
HpyF10VI GCNNNNNNNGC 2 cut(s) 1184, 1325
HpyF3I CTNAG 5 cut(s) 83, 212, 228, 492, 1134
HpySE526I ACGT 2 cut(s) 1297, 1411
Hsp92II CATG 3 cut(s) 252, 938, 1247
KpnI GGTACC 1 cut(s) 47
Ksp22I TGATCA 1 cut(s) 997
KspAI GTTAAC 1 cut(s) 1123
Kzo9I GATC 2 cut(s) 997, 1009
LguI GCTCTTC 1 cut(s) 1286
LmnI GCTCC 2 cut(s) 556, 604
Lsp1109I GCAGC 4 cut(s) 469, 823, 1165, 1328
LweI GCATC 2 cut(s) 1080, 1311
MaeI CTAG 5 cut(s) 149, 504, 876, 1088, 1265
MaeII ACGT 2 cut(s) 1297, 1411
MaeIII GTNAC 3 cut(s) 559, 799, 961
MalI GATC 2 cut(s) 999, 1011
MboI GATC 2 cut(s) 997, 1009
MboII GAAGA 7 cut(s) 176, 213, 368, 1160, 1202, 1273, 1280
MfeI CAATTG 2 cut(s) 983, 1392
MhlI GDGCHC 2 cut(s) 273, 553
MlyI GAGTC 2 cut(s) 96, 212
MmeI TCCRAC 4 cut(s) 131, 340, 359, 763
Mph1103I ATGCAT 1 cut(s) 1073
MseI TTAA 2 cut(s) 537, 1122
MslI CAYNNNNRTG 3 cut(s) 810, 1020, 1248
MspA1I CMGCKG 2 cut(s) 460, 1156
MspI CCGG 2 cut(s) 41, 428
MspR9I CCNGG 3 cut(s) 516, 1031, 1292
MunI CAATTG 2 cut(s) 983, 1392
Mva1269I GAATGC 1 cut(s) 838
MvaI CCWGG 3 cut(s) 516, 1031, 1292
MwoI GCNNNNNNNGC 2 cut(s) 1184, 1325
NcoI CCATGG 2 cut(s) 248, 1243
NdeI CATATG 1 cut(s) 883
NdeII GATC 2 cut(s) 997, 1009
NlaIII CATG 3 cut(s) 252, 938, 1247
NlaIV GGNNCC 7 cut(s) 45, 552, 587, 600, 860, 951, 1360
NmuCI GTSAC 1 cut(s) 961
NsiI ATGCAT 1 cut(s) 1073
PciSI GCTCTTC 1 cut(s) 1286
PctI GAATGC 1 cut(s) 838
PfeI GAWTC 6 cut(s) 167, 543, 667, 820, 869, 1207
PflFI GACNNNGTC 2 cut(s) 959, 1229
PfoI TCCNGGA 2 cut(s) 514, 1029
PkrI GCNGC 5 cut(s) 7, 459, 838, 1155, 1318
PleI GAGTC 2 cut(s) 95, 212
PmaCI CACGTG 1 cut(s) 1298
PmlI CACGTG 1 cut(s) 1298
PpsI GAGTC 2 cut(s) 95, 212
Ppu21I YACGTR 1 cut(s) 1298
PshAI GACNNNNGTC 1 cut(s) 857
PshBI ATTAAT 1 cut(s) 537
Psp6I CCWGG 3 cut(s) 514, 1029, 1290
PspCI CACGTG 1 cut(s) 1298
PspGI CCWGG 3 cut(s) 514, 1029, 1290
PspN4I GGNNCC 7 cut(s) 45, 552, 587, 600, 860, 951, 1360
PspPI GGNCC 4 cut(s) 232, 859, 950, 1033
PstNI CAGNNNCTG 1 cut(s) 460
PsyI GACNNNGTC 2 cut(s) 959, 1229
PvuII CAGCTG 2 cut(s) 460, 1156
RsaI GTAC 5 cut(s) 45, 576, 617, 880, 904
RsaNI GTAC 5 cut(s) 44, 575, 616, 879, 903
RseI CAYNNNNRTG 3 cut(s) 810, 1020, 1248
SapI GCTCTTC 1 cut(s) 1286
SaqAI TTAA 2 cut(s) 537, 1122
SatI GCNGC 5 cut(s) 6, 458, 837, 1154, 1317
Sau3AI GATC 2 cut(s) 997, 1009
Sau96I GGNCC 4 cut(s) 232, 859, 950, 1033
ScaI AGTACT 1 cut(s) 904
SchI GAGTC 2 cut(s) 96, 212
ScrFI CCNGG 3 cut(s) 516, 1031, 1292
SduI GDGCHC 2 cut(s) 273, 553
SfaNI GCATC 2 cut(s) 1080, 1311
SinI GGWCC 3 cut(s) 859, 950, 1033
SmiMI CAYNNNNRTG 3 cut(s) 810, 1020, 1248
SmlI CTYRAG 1 cut(s) 96
SmoI CTYRAG 1 cut(s) 96
SsiI CCGC 2 cut(s) 5, 613
SspMI CTAG 5 cut(s) 149, 504, 876, 1088, 1265
StyD4I CCNGG 3 cut(s) 514, 1029, 1290
StyI CCWWGG 3 cut(s) 248, 671, 1243
TaaI ACNGT 5 cut(s) 475, 565, 961, 1148, 1192
TaiI ACGT 2 cut(s) 1300, 1414
TaqI TCGA 2 cut(s) 1305, 1418
TatI WGTACW 2 cut(s) 878, 902
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 6 cut(s) 167, 543, 667, 820, 869, 1207
Tru1I TTAA 2 cut(s) 537, 1122
Tru9I TTAA 2 cut(s) 537, 1122
TscAI CASTG 3 cut(s) 289, 640, 984
TseFI GTSAC 1 cut(s) 961
TseI GCWGC 4 cut(s) 457, 836, 1153, 1316
Tsp45I GTSAC 1 cut(s) 961
TspDTI ATGAA 3 cut(s) 177, 286, 1374
TspGWI ACGGA 1 cut(s) 851
TspRI CASTG 3 cut(s) 289, 640, 984
Tth111I GACNNNGTC 2 cut(s) 959, 1229
VpaK11BI GGWCC 3 cut(s) 859, 950, 1033
VspI ATTAAT 1 cut(s) 537
XapI RAATTY 3 cut(s) 366, 412, 760
XspI CTAG 5 cut(s) 149, 504, 876, 1088, 1265
ZrmI AGTACT 1 cut(s) 904
Zsp2I ATGCAT 1 cut(s) 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.