Rmu_sc0032469.1_g000008

Protein ABCI7, chloroplastic-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0032469.1
Physical Location & Seq
Reverse (-)
22766 .. 26099
3334 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0032469.1_g000008.1.cds

Sequence Viewer

Length: 1458 bp
atggctgccatagcatttacgccccaggttcaaagacctcccctatccttattttccacacccaaaaccccaaaacctaaaaccagagtttctctccaaccttcttcttcttcttcttcttcttcttcaacttcacagctgtcctacgaccccttcgttcaccaactcgccgagtctctcgacgactcactcccctcctcctcctcctcttcttcttcctcatctctccaaagcctcagagactcttccgttcaaaccgtcctctcaaccccatggcctacgcgcaaagacgagccctttcgattcaccgacacctccttcatcaagaactctcaaatcacgccaatctctcgcccaccaagccttccaaccacgccggacgacacccagttcccaagtttggatattgtcgatggtttccttgtgaatttgtcaaatttgggtgaattgcccaatggggtttatgtgggtagcttgctggagctttcggacgagacaatcctgaaaagggtgtcggagtttttgtccagtagttctcagggagacttgttttggtccattaatggaattggggcgccggatttgactgtggtttatgttccggcagggtgccgggtagagaatcctgtttacttgcgctacattgccaatgaaggaggtgacattgggtcacctaagctgcctttatcgaatccgagggtgcttgtgttggtggagaagggaggggagattggtgtgattgaggagtttttgggtggggatggggataaggcttattgggttaactctgttttggaggttgtggttggagaaggagggaaagttaggcattcttatgttcagaaccagtctgtaaatgctgcccacatcaagtggacttcggttcgccaggaatcagccagtacatatgagcttgtcgagattagcactggtggaaggttgagcaggcacaatctccatgttcagcaactgggacctgacacaatcaccgagttatcaaccctgcacttgtctgccggggatcaaacacaagatctacatagtagcatagtccttgaccatccacgaggttattccagacaacttcataagtgcattgtgtctcattctgaaggaaaagccgtctttgatgggaatgtaaaggtcaacagatatgcacaacagacagatggtgggcaactaacaagaagtcttcttcttgcaccccgtgccaccgtaaatgttaaaccaaatcttcagatcattgctgatgatgtcaagtgttcccatggagctgcaattagtgacctagaagaaacccagctcttttatttcctggcacgcgggatcagtttagaggcagcaagaagggctcttgtctattcctttggcgctgaggtgattgaaggattaccttatccttggataaagacgaaggtagaaagtcaaattaaagaattgttggaaggatcctcataa

Protein Analysis

485

Amino Acids

52.64

Weight (kDa)

5.53

Isoelectric Point (pI)

44.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 574, 609
AccII CGCG 2 cut(s) 283, 1323
AciI CCGC 1 cut(s) 1323
AclWI GGATC 4 cut(s) 1029, 1334, 1443, 1456
AcsI RAATTY 2 cut(s) 427, 436
AcuI CTGAAG 2 cut(s) 1131, 1220
AcyI GRCGYC 1 cut(s) 575
AdeI CACNNNGTG 1 cut(s) 1208
AfaI GTAC 1 cut(s) 904
AfiI CCNNNNNNNGG 2 cut(s) 400, 508
AgsI TTSAA 4 cut(s) 32, 129, 254, 1385
AhdI GACNNNNNGTC 1 cut(s) 667
AjnI CCWGG 3 cut(s) 24, 888, 1314
AluBI AGCT 7 cut(s) 139, 474, 484, 679, 913, 1274, 1303
AluI AGCT 7 cut(s) 139, 474, 484, 679, 913, 1274, 1303
Alw26I GTCTC 5 cut(s) 180, 234, 488, 537, 1107
AlwI GGATC 4 cut(s) 1029, 1334, 1443, 1456
AlwNI CAGNNNCTG 1 cut(s) 970
AoxI GGCC 1 cut(s) 275
ApeKI GCWGC 5 cut(s) 5, 679, 860, 1274, 1340
ApoI RAATTY 2 cut(s) 427, 436
AseI ATTAAT 1 cut(s) 561
AspLEI GCGC 4 cut(s) 285, 577, 639, 1373
AspS9I GGNCC 2 cut(s) 555, 974
AsuC2I CCSGG 2 cut(s) 614, 1018
AsuHPI GGTGA 7 cut(s) 152, 298, 455, 663, 671, 979, 1390
AvaII GGWCC 2 cut(s) 555, 974
BamHI GGATCC 1 cut(s) 1448
BanI GGYRCC 2 cut(s) 574, 609
BanII GRGCYC 2 cut(s) 297, 1354
BauI CACGAG 1 cut(s) 1065
BbsI GAAGAC 1 cut(s) 1184
BbvCI CCTCAGC 1 cut(s) 1374
BbvI GCAGC 4 cut(s) 666, 847, 1261, 1352
BccI CCATC 5 cut(s) 407, 755, 1068, 1124, 1163
BceAI ACGGC 1 cut(s) 1106
BciT130I CCWGG 3 cut(s) 26, 890, 1316
BcnI CCSGG 2 cut(s) 614, 1018
BcoDI GTCTC 5 cut(s) 180, 234, 488, 537, 1107
BfaI CTAG 1 cut(s) 1289
BfoI RGCGCY 2 cut(s) 578, 1374
BglII AGATCT 1 cut(s) 1033
BisI GCNGC 5 cut(s) 6, 680, 861, 1275, 1341
BlsI GCNGC 5 cut(s) 7, 681, 862, 1276, 1342
Bme1390I CCNGG 5 cut(s) 26, 614, 890, 1018, 1316
Bme18I GGWCC 2 cut(s) 555, 974
BmeRI GACNNNNNGTC 1 cut(s) 667
BmgT120I GGNCC 2 cut(s) 555, 974
BmiI GGNNCC 4 cut(s) 576, 611, 975, 1450
BmrFI CCNGG 5 cut(s) 26, 614, 890, 1018, 1316
BmrI ACTGGG 2 cut(s) 382, 980
BmuI ACTGGG 2 cut(s) 382, 980
BpiI GAAGAC 1 cut(s) 1184
BplI GAGNNNNNCTC 2 cut(s) 78, 110
BpmI CTGGAG 1 cut(s) 500
Bpu10I CCTNAGC 2 cut(s) 675, 1374
BpuMI CCSGG 2 cut(s) 614, 1018
BsaHI GRCGYC 1 cut(s) 575
BsaJI CCNNGG 6 cut(s) 24, 272, 695, 1017, 1267, 1400
BsaXI ACNNNNNCTCC 4 cut(s) 509, 539, 807, 837
Bsc4I CCNNNNNNNGG 2 cut(s) 400, 508
Bse1I ACTGG 6 cut(s) 388, 528, 847, 900, 934, 975
Bse3DI GCAATG 2 cut(s) 642, 1242
BseBI CCWGG 3 cut(s) 26, 890, 1316
BseDI CCNNGG 6 cut(s) 24, 272, 695, 1017, 1267, 1400
BseGI GGATG 2 cut(s) 766, 1060
BseLI CCNNNNNNNGG 2 cut(s) 400, 508
BseMI GCAATG 2 cut(s) 642, 1242
BseMII CTCAG 3 cut(s) 250, 551, 1365
BseNI ACTGG 6 cut(s) 388, 528, 847, 900, 934, 975
BseRI GAGGAG 5 cut(s) 187, 190, 193, 196, 758
BseXI GCAGC 4 cut(s) 666, 847, 1261, 1352
BseYI CCCAGC 1 cut(s) 1299
BsgI GTGCAG 1 cut(s) 989
Bsh1236I CGCG 2 cut(s) 283, 1323
BshFI GGCC 1 cut(s) 277
BshNI GGYRCC 2 cut(s) 574, 609
BsiSI CCGG 5 cut(s) 377, 578, 602, 613, 1017
BslFI GGGAC 1 cut(s) 987
BslI CCNNNNNNNGG 2 cut(s) 400, 508
BsmAI GTCTC 5 cut(s) 180, 234, 488, 537, 1107
BsmFI GGGAC 1 cut(s) 987
BsmI GAATGC 1 cut(s) 829
BsnI GGCC 1 cut(s) 277
Bsp1286I GDGCHC 2 cut(s) 297, 1354
Bsp143I GATC 5 cut(s) 1021, 1033, 1239, 1326, 1448
Bsp19I CCATGG 2 cut(s) 272, 1267
BspACI CCGC 1 cut(s) 1323
BspANI GGCC 1 cut(s) 277
BspCNI CTCAG 3 cut(s) 249, 550, 1366
BspFNI CGCG 2 cut(s) 283, 1323
BspLI GGNNCC 4 cut(s) 576, 611, 975, 1450
BspPI GGATC 4 cut(s) 1029, 1334, 1443, 1456
BspT107I GGYRCC 2 cut(s) 574, 609
BsrDI GCAATG 2 cut(s) 642, 1242
BsrI ACTGG 6 cut(s) 388, 528, 847, 900, 934, 975
BssECI CCNNGG 6 cut(s) 24, 272, 695, 1017, 1267, 1400
BssMI GATC 5 cut(s) 1021, 1033, 1239, 1326, 1448
BssNI GRCGYC 1 cut(s) 575
BssSI CACGAG 1 cut(s) 1065
BssT1I CCWWGG 3 cut(s) 272, 1267, 1400
Bst2BI CACGAG 1 cut(s) 1065
Bst2UI CCWGG 3 cut(s) 26, 890, 1316
Bst4CI ACNGT 3 cut(s) 259, 589, 1216
Bst6I CTCTTC 2 cut(s) 214, 250
BstACI GRCGYC 1 cut(s) 575
BstAPI GCANNNNNTGC 1 cut(s) 1208
BstC8I GCNNGC 3 cut(s) 476, 947, 1321
BstDEI CTNAG 4 cut(s) 236, 537, 675, 1374
BstDSI CCRYGG 2 cut(s) 272, 1267
BstEII GGTNACC 1 cut(s) 669
BstF5I GGATG 2 cut(s) 766, 1060
BstFNI CGCG 2 cut(s) 283, 1323
BstH2I RGCGCY 2 cut(s) 578, 1374
BstHHI GCGC 4 cut(s) 285, 577, 639, 1373
BstKTI GATC 5 cut(s) 1024, 1036, 1242, 1329, 1451
BstMAI GTCTC 5 cut(s) 180, 234, 488, 537, 1107
BstMBI GATC 5 cut(s) 1021, 1033, 1239, 1326, 1448
BstMWI GCNNNNNNNGC 4 cut(s) 11, 360, 1208, 1349
BstNI CCWGG 3 cut(s) 26, 890, 1316
BstPI GGTNACC 1 cut(s) 669
BstSCI CCNGG 5 cut(s) 24, 612, 888, 1016, 1314
BstUI CGCG 2 cut(s) 283, 1323
BstV1I GCAGC 4 cut(s) 666, 847, 1261, 1352
BstV2I GAAGAC 1 cut(s) 1184
BstX2I RGATCY 2 cut(s) 1033, 1448
BstYI RGATCY 2 cut(s) 1033, 1448
BsuRI GGCC 1 cut(s) 277
BtgI CCRYGG 2 cut(s) 272, 1267
BtsCI GGATG 2 cut(s) 766, 1060
BtsIMutI CAGTG 1 cut(s) 927
Cac8I GCNNGC 3 cut(s) 476, 947, 1321
CaiI CAGNNNCTG 1 cut(s) 970
CfoI GCGC 4 cut(s) 285, 577, 639, 1373
Cfr13I GGNCC 2 cut(s) 555, 974
Csp6I GTAC 1 cut(s) 903
CviAII CATG 3 cut(s) 273, 959, 1268
CviQI GTAC 1 cut(s) 903
DdeI CTNAG 4 cut(s) 236, 537, 675, 1374
DinI GGCGCC 1 cut(s) 576
DpnI GATC 5 cut(s) 1023, 1035, 1241, 1328, 1450
DpnII GATC 5 cut(s) 1021, 1033, 1239, 1326, 1448
DraIII CACNNNGTG 1 cut(s) 1208
DriI GACNNNNNGTC 1 cut(s) 667
Eam1104I CTCTTC 2 cut(s) 214, 250
Eam1105I GACNNNNNGTC 1 cut(s) 667
EarI CTCTTC 2 cut(s) 214, 250
Eco130I CCWWGG 3 cut(s) 272, 1267, 1400
Eco24I GRGCYC 2 cut(s) 297, 1354
Eco47I GGWCC 2 cut(s) 555, 974
Eco57I CTGAAG 2 cut(s) 1131, 1220
Eco91I GGTNACC 1 cut(s) 669
EcoO109I RGGNCCY 1 cut(s) 974
EcoO65I GGTNACC 1 cut(s) 669
EcoRII CCWGG 3 cut(s) 24, 888, 1314
EcoT14I CCWWGG 3 cut(s) 272, 1267, 1400
EcoT38I GRGCYC 2 cut(s) 297, 1354
EgeI GGCGCC 1 cut(s) 576
EheI GGCGCC 1 cut(s) 576
ErhI CCWWGG 3 cut(s) 272, 1267, 1400
FaeI CATG 3 cut(s) 276, 962, 1271
FaqI GGGAC 1 cut(s) 987
FatI CATG 3 cut(s) 272, 958, 1267
FauI CCCGC 1 cut(s) 1316
FauNDI CATATG 1 cut(s) 907
Fnu4HI GCNGC 5 cut(s) 6, 680, 861, 1275, 1341
FokI GGATG 2 cut(s) 773, 1047
FriOI GRGCYC 2 cut(s) 297, 1354
Fsp4HI GCNGC 5 cut(s) 6, 680, 861, 1275, 1341
FspBI CTAG 1 cut(s) 1289
GlaI GCGC 4 cut(s) 284, 576, 638, 1372
GluI GCNGC 5 cut(s) 6, 680, 861, 1275, 1341
GsaI CCCAGC 1 cut(s) 1303
GsuI CTGGAG 1 cut(s) 500
HaeII RGCGCY 2 cut(s) 578, 1374
HaeIII GGCC 1 cut(s) 277
HapII CCGG 5 cut(s) 377, 578, 602, 613, 1017
HhaI GCGC 4 cut(s) 285, 577, 639, 1373
Hin1I GRCGYC 1 cut(s) 575
Hin1II CATG 3 cut(s) 276, 962, 1271
Hin6I GCGC 4 cut(s) 283, 575, 637, 1371
HinP1I GCGC 4 cut(s) 283, 575, 637, 1371
HincII GTYRAC 2 cut(s) 784, 1147
HindII GTYRAC 2 cut(s) 784, 1147
HinfI GANTC 7 cut(s) 173, 185, 242, 303, 622, 691, 893
HpaI GTTAAC 1 cut(s) 784
HpaII CCGG 5 cut(s) 377, 578, 602, 613, 1017
HphI GGTGA 7 cut(s) 152, 298, 455, 663, 671, 979, 1390
Hpy166II GTNNAC 5 cut(s) 160, 631, 784, 876, 1147
Hpy188I TCNGA 7 cut(s) 239, 490, 517, 696, 843, 1111, 1239
Hpy188III TCNNGA 5 cut(s) 179, 325, 502, 919, 1077
Hpy8I GTNNAC 5 cut(s) 160, 631, 784, 876, 1147
Hpy99I CGWCG 1 cut(s) 185
HpyCH4III ACNGT 3 cut(s) 259, 589, 1216
HpyCH4V TGCA 5 cut(s) 1006, 1095, 1157, 1202, 1277
HpyF10VI GCNNNNNNNGC 4 cut(s) 11, 360, 1208, 1349
HpyF3I CTNAG 4 cut(s) 236, 537, 675, 1374
Hsp92I GRCGYC 1 cut(s) 575
Hsp92II CATG 3 cut(s) 276, 962, 1271
HspAI GCGC 4 cut(s) 283, 575, 637, 1371
KasI GGCGCC 1 cut(s) 574
KspAI GTTAAC 1 cut(s) 784
Kzo9I GATC 5 cut(s) 1021, 1033, 1239, 1326, 1448
LmnI GCTCC 2 cut(s) 481, 1271
Lsp1109I GCAGC 4 cut(s) 666, 847, 1261, 1352
MaeI CTAG 1 cut(s) 1289
MaeIII GTNAC 3 cut(s) 659, 669, 1283
MalI GATC 5 cut(s) 1023, 1035, 1241, 1328, 1450
MboI GATC 5 cut(s) 1021, 1033, 1239, 1326, 1448
MflI RGATCY 2 cut(s) 1033, 1448
MhlI GDGCHC 2 cut(s) 297, 1354
MluCI AATT 7 cut(s) 427, 436, 446, 567, 1278, 1428, 1436
Mly113I GGCGCC 1 cut(s) 575
MlyI GAGTC 3 cut(s) 179, 182, 236
MmeI TCCRAC 5 cut(s) 121, 392, 495, 787, 1422
MseI TTAA 4 cut(s) 561, 783, 1224, 1431
MslI CAYNNNNRTG 1 cut(s) 834
MspA1I CMGCKG 1 cut(s) 139
MspI CCGG 5 cut(s) 377, 578, 602, 613, 1017
MspR9I CCNGG 5 cut(s) 26, 614, 890, 1018, 1316
Mva1269I GAATGC 1 cut(s) 829
MvaI CCWGG 3 cut(s) 26, 890, 1316
MvnI CGCG 2 cut(s) 283, 1323
MwoI GCNNNNNNNGC 4 cut(s) 11, 360, 1208, 1349
NarI GGCGCC 1 cut(s) 575
NciI CCSGG 2 cut(s) 614, 1018
NcoI CCATGG 2 cut(s) 272, 1267
NdeI CATATG 1 cut(s) 907
NdeII GATC 5 cut(s) 1021, 1033, 1239, 1326, 1448
NlaIII CATG 3 cut(s) 276, 962, 1271
NlaIV GGNNCC 4 cut(s) 576, 611, 975, 1450
NmeAIII GCCGAG 1 cut(s) 196
NmuCI GTSAC 3 cut(s) 659, 669, 1283
PcsI WCGNNNNNNNCGW 1 cut(s) 153
PctI GAATGC 1 cut(s) 829
PfeI GAWTC 4 cut(s) 303, 622, 691, 893
PkrI GCNGC 5 cut(s) 7, 681, 862, 1276, 1342
PleI GAGTC 3 cut(s) 179, 181, 236
PluTI GGCGCC 1 cut(s) 578
PpsI GAGTC 3 cut(s) 179, 181, 236
PpuMI RGGWCCY 1 cut(s) 974
PshBI ATTAAT 1 cut(s) 561
Psp5II RGGWCCY 1 cut(s) 974
Psp6I CCWGG 3 cut(s) 24, 888, 1314
PspEI GGTNACC 1 cut(s) 669
PspFI CCCAGC 1 cut(s) 1299
PspGI CCWGG 3 cut(s) 24, 888, 1314
PspN4I GGNNCC 4 cut(s) 576, 611, 975, 1450
PspPI GGNCC 2 cut(s) 555, 974
PspPPI RGGWCCY 1 cut(s) 974
PstNI CAGNNNCTG 1 cut(s) 970
PsuI RGATCY 2 cut(s) 1033, 1448
PvuII CAGCTG 1 cut(s) 139
RsaI GTAC 1 cut(s) 904
RsaNI GTAC 1 cut(s) 903
RseI CAYNNNNRTG 1 cut(s) 834
SaqAI TTAA 4 cut(s) 561, 783, 1224, 1431
SatI GCNGC 5 cut(s) 6, 680, 861, 1275, 1341
Sau3AI GATC 5 cut(s) 1021, 1033, 1239, 1326, 1448
Sau96I GGNCC 2 cut(s) 555, 974
SchI GAGTC 3 cut(s) 179, 182, 236
ScrFI CCNGG 5 cut(s) 26, 614, 890, 1018, 1316
SduI GDGCHC 2 cut(s) 297, 1354
SfoI GGCGCC 1 cut(s) 576
SinI GGWCC 2 cut(s) 555, 974
SmiMI CAYNNNNRTG 1 cut(s) 834
Sse9I AATT 7 cut(s) 427, 436, 446, 567, 1278, 1428, 1436
SsiI CCGC 1 cut(s) 1323
SspDI GGCGCC 1 cut(s) 574
SspMI CTAG 1 cut(s) 1289
StyD4I CCNGG 5 cut(s) 24, 612, 888, 1016, 1314
StyI CCWWGG 3 cut(s) 272, 1267, 1400
TaaI ACNGT 3 cut(s) 259, 589, 1216
TaqI TCGA 5 cut(s) 180, 301, 411, 689, 918
TasI AATT 7 cut(s) 427, 436, 446, 567, 1278, 1428, 1436
TatI WGTACW 1 cut(s) 902
TfiI GAWTC 4 cut(s) 303, 622, 691, 893
Tru1I TTAA 4 cut(s) 561, 783, 1224, 1431
Tru9I TTAA 4 cut(s) 561, 783, 1224, 1431
TscAI CASTG 1 cut(s) 934
TseFI GTSAC 3 cut(s) 659, 669, 1283
TseI GCWGC 5 cut(s) 5, 679, 860, 1274, 1340
Tsp45I GTSAC 3 cut(s) 659, 669, 1283
TspDTI ATGAA 3 cut(s) 310, 666, 1076
TspGWI ACGGA 1 cut(s) 238
TspRI CASTG 1 cut(s) 934
VpaK11BI GGWCC 2 cut(s) 555, 974
VspI ATTAAT 1 cut(s) 561
XapI RAATTY 2 cut(s) 427, 436
XspI CTAG 1 cut(s) 1289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.