Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0007905

Physical Location & Seq

Genomic Coordinates Reverse (-)

44915938 .. 44921319

Gene Structure 5382 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00199060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGACGCATAAGGTAACATATGTAGAAAAGATAGACTCCATAGGGTTAGTAGGTGAAGATGCGGCCATACACGAGATGCAACTTCTTGACCAAAAGGTTTGGCATCGGGTGTTGAAGTATCGGATGAGGGGGAAGCGGAATAGAGTCTTCTTCGGCTTCAAGAATCTACTAGTCGAAATTATCCTTTGGTCGGTCGAGTACACCTCTGCCCATTTCGCCGGTTTCCTCGTTTGGTGGTCAACTCCCCCTGTCAATTGGTGGGTGATAGCACTTGTAGCCTTTTTTATGAGAACCATAGCCTACAAAGATGCATTTGAGTGCTGGACATCCAACTTTGACCTCGATTTTTGGGTATGCGGACAAAAGCAACATAGCCAAAGACATGCCACAACCGATCCCAAAGAGTCTCGGATCACCACTCCTGCTCCTTCCTTATGTGATGCCAAATCAAAGGCTCCATCAATGTTCGCTTTGAGCCAACTAGCGGAGCTAGAAGAGAAGTTAGTTACAATGTTGGTTCACTGGGGCACAATGTGCCACATCAAGGCACCACCGGATAGTCGATATGGTCCGATGGCGGCAATCACTATGCCCCTCAAAAGCATACCAGAGGTTCAAAGACCTCCCCTATCCTTATTTTCCACACCCAAAACCCCAAAACCTAAAACCAGAGTTTCTCTCCAACCTTCTTCTTCTTCTTCTTCTTTTTCTTCTTCTTCTTCTTCAACTTCACAGCTGTCCTACGACCCCTTCGTTCACCAACTCGCGGAGTCTCTCGACGACTCACTCCCCTCCTCCTCTTCTTCTTCCTCATCTCTCCAAAGCCTCAGAGACTCTTCCGTTCAAACCGTCCTCTCAACCCCATGGCCTACGCGCAAAGACGAGCCCTTTCGATTCACCGACACGTCCTTCATCAAGAACTCTCAAATTACGCCAATCTCTCGCCCACCAAGCTTTCCCACCACTCCGGACGATACCCAGTTCCCAAGTTTGGATATTGTCGATGGTTTCCTTGTGAATTTGTCAAATTTGGGTGAATTGCCCAATGGGGTTTATGTGGGTAGCTTGCTGGAGCTTTCAGACGAGACAATCCTGAAAGGGGTGTCTGAGTTTTTGTCCAGTAGTTCTCAGGGAGACCTGTTTTGGTCCATTAATGGAATTGGGGCGCCGGATTTGACTCTGGTTTATGTTCCGGCAGGGTGCCGGGTAGAGAATCCTATTTACTTGCGCTACATTGGCAATGAAGGAGGTGACATTGGGTCACATAAGCTGCCCTTATCGAATCCGAGGGTGCTTGTGTTGGTGGAGAAGGGAGGGGAGATTGGTGTGATTGAGGAGTTTTTGGGTGGGGATGGGGATAAGGCTTATTGGGTTAACTCTGTTTTGGAGGTTGTGGTTGGAGAAGGAGGGAAAGTTAGGCATTCTTATGTTCAGAACCAGTCTGTACATGCTGCCCACATCAAGTGGACTTCGGTTCGCCAGGAATCAGCCAGTACATATGAGCTTGTCGAGATTAGTACTGGTGGAAAGTTGAGCAGGCACAATCTCCATGTTCAGCAACTGGGACCTGACACAATCACTGAGTTATCAACCCTGCACTTGTCTGCCGGGGATCAAACACAAGATCTACATAGTAGCATAGTCCTTGACCATCCACGAGGTTATTCCAGACAACTTCATAAGTGCATTGTGTCTCATTCTGAAGGAAAAGCCGTCTTTGATGGGAATGTAAAGGTCAACAGATATGCACAACAGACAGATGGTGGGCAACTAACAAGAAGTCTTCTTCTTGCACCCCGTGCCACCGTAAATGTTAAACCAAATCTTCAGATCATTGCTGATGATGTCAAGTGTTCCCATGGAGCTGCAATTAGTGACCTAGAAGAAACCCAGCTCTTTTATTTCCTGGCACGTGGGATCAGTTTAAAGGCAGCAAGAAGGGCTCTTGTCTATTCCTTTGGCGCTGAGGTGATTGAAGGATTACCTTATCCTTGGATAAAGACGAAGGTAGAGAGTCAAATTAAAGAATTGTTGGAAGGATCCTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006790 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009657 GO:0009668 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010027 GO:0010154 GO:0016043 GO:0016226 GO:0022414 GO:0022607 GO:0031163 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051186 GO:0061024 GO:0061458 GO:0071840

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

UPF0051

Protein Analysis

682

Amino Acids

75.44

Weight (kDa)

6.33

Isoelectric Point (pI)

39.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SufBD_N	PF19295	267 - 408	1.7e-06	SufBD protein N-terminal region
SUFBD_core	PF01458	426 - 653	2.8e-67	SUF system FeS cluster assembly, SufBD core domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007905)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32500
fragaria_vesca	FvH4_6g31710 FvH4_6g31710 FvH4_6g31710 FvH4_6g31710 FvH4_6g31710 FvH4_6g31710
malus_domestica	MD09G1232600.v1.1 MD15G1388500.v1.1
prunus_persica	Prupe.1G552500_v2.0.a1
pyrus_communis	pycom09g14240
rosa_chinensis	RchiOBHm_Chr6g0269051
rosa_laevigata	RLG00000013887 RLG00000021344
rosa_multiflora	Rmu_sc0004350.1_g000003 Rmu_sc0032469.1_g000008
rosa_roxburghii	Rroxscaffold_7G00199060
rosa_rugosa	Rorug06G0044700
rosa_samantha	Rh6AG165200 Rh6BG170600 Rh6CG164100 Rh6DG155700
rosa_wichuraiana	Rw6G014210 Rw6G014270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	547, 1165, 1200
AccII	CGCG	2 cut(s)	767, 874
AccIII	TCCGGA	1 cut(s)	967
AciI	CCGC	6 cut(s)	62, 136, 357, 485, 578, 767
AclWI	GGATC	6 cut(s)	389, 419, 1620, 1925, 2034, 2047
AcoI	YGGCCR	1 cut(s)	63
AcsI	RAATTY	2 cut(s)	1018, 1027
AcuI	CTGAAG	2 cut(s)	1722, 1811
AcvI	CACGTG	1 cut(s)	1913
AcyI	GRCGYC	1 cut(s)	1166
AdeI	CACNNNGTG	2 cut(s)	534, 1799
AfaI	GTAC	4 cut(s)	200, 1446, 1495, 1519
AfiI	CCNNNNNNNGG	6 cut(s)	190, 484, 544, 766, 991, 1099
AflIII	ACRYGT	1 cut(s)	903
AgsI	TTSAA	6 cut(s)	115, 160, 617, 726, 845, 1976
AhdI	GACNNNNNGTC	1 cut(s)	1258
AhlI	ACTAGT	1 cut(s)	169
AjiI	CACGTC	1 cut(s)	906
AjnI	CCWGG	2 cut(s)	1479, 1905
AluBI	AGCT	9 cut(s)	490, 736, 954, 1065, 1075, 1270, 1504, 1865, 1894
AluI	AGCT	9 cut(s)	490, 736, 954, 1065, 1075, 1270, 1504, 1865, 1894
Alw26I	GTCTC	6 cut(s)	411, 777, 825, 1079, 1128, 1698
AlwI	GGATC	6 cut(s)	389, 419, 1620, 1925, 2034, 2047
AlwNI	CAGNNNCTG	1 cut(s)	1561
Aor13HI	TCCGGA	1 cut(s)	967
AoxI	GGCC	2 cut(s)	63, 866
ApeKI	GCWGC	4 cut(s)	1270, 1451, 1865, 1931
ApoI	RAATTY	2 cut(s)	1018, 1027
AseI	ATTAAT	1 cut(s)	1152
AspLEI	GCGC	4 cut(s)	876, 1168, 1230, 1964
AspS9I	GGNCC	3 cut(s)	569, 1146, 1565
AsuC2I	CCSGG	2 cut(s)	1205, 1609
AsuHPI	GGTGA	8 cut(s)	65, 274, 406, 749, 889, 1046, 1262, 1981
AvaII	GGWCC	3 cut(s)	569, 1146, 1565
BaeGI	GKGCMC	1 cut(s)	530
BamHI	GGATCC	1 cut(s)	2039
BanI	GGYRCC	3 cut(s)	547, 1165, 1200
BanII	GRGCYC	2 cut(s)	888, 1945
BauI	CACGAG	2 cut(s)	71, 1656
BbrPI	CACGTG	1 cut(s)	1913
BbsI	GAAGAC	2 cut(s)	139, 1775
BbvCI	CCTCAGC	1 cut(s)	1965
BbvI	GCAGC	4 cut(s)	1257, 1438, 1852, 1943
BccI	CCATC	7 cut(s)	466, 568, 998, 1346, 1659, 1715, 1754
BceAI	ACGGC	1 cut(s)	1697
BciT130I	CCWGG	2 cut(s)	1481, 1907
BcnI	CCSGG	2 cut(s)	1205, 1609
BcoDI	GTCTC	6 cut(s)	411, 777, 825, 1079, 1128, 1698
BcuI	ACTAGT	1 cut(s)	169
BfaI	CTAG	4 cut(s)	170, 482, 491, 1880
BfoI	RGCGCY	2 cut(s)	1169, 1965
BglII	AGATCT	1 cut(s)	1624
BisI	GCNGC	6 cut(s)	63, 579, 1271, 1452, 1866, 1932
BlsI	GCNGC	6 cut(s)	64, 580, 1272, 1453, 1867, 1933
BmcAI	AGTACT	1 cut(s)	1519
Bme1390I	CCNGG	4 cut(s)	1205, 1481, 1609, 1907
Bme18I	GGWCC	3 cut(s)	569, 1146, 1565
BmeRI	GACNNNNNGTC	1 cut(s)	1258
BmgBI	CACGTC	1 cut(s)	906
BmgT120I	GGNCC	3 cut(s)	569, 1146, 1565
BmiI	GGNNCC	6 cut(s)	456, 549, 1167, 1202, 1566, 2041
BmrFI	CCNGG	4 cut(s)	1205, 1481, 1609, 1907
BmrI	ACTGGG	3 cut(s)	532, 973, 1571
BmsI	GCATC	5 cut(s)	49, 66, 112, 298, 430
BmuI	ACTGGG	3 cut(s)	532, 973, 1571
BpiI	GAAGAC	2 cut(s)	139, 1775
BplI	GAGNNNNNCTC	4 cut(s)	188, 220, 663, 695
BpmI	CTGGAG	1 cut(s)	1091
Bpu10I	CCTNAGC	1 cut(s)	1965
BpuMI	CCSGG	2 cut(s)	1205, 1609
BsaAI	YACGTR	1 cut(s)	1913
BsaHI	GRCGYC	1 cut(s)	1166
BsaI	GGTCTC	1 cut(s)	1128
BsaJI	CCNNGG	5 cut(s)	863, 1286, 1608, 1858, 1991
BsaWI	WCCGGW	2 cut(s)	553, 967
BsaXI	ACNNNNNCTCC	4 cut(s)	409, 439, 1398, 1428
Bsc4I	CCNNNNNNNGG	6 cut(s)	190, 484, 544, 766, 991, 1099
Bse118I	RCCGGY	1 cut(s)	218
Bse1I	ACTGG	7 cut(s)	527, 979, 1119, 1438, 1491, 1525, 1566
Bse3DI	GCAATG	2 cut(s)	1246, 1833
BseAI	TCCGGA	1 cut(s)	967
BseBI	CCWGG	2 cut(s)	1481, 1907
BseDI	CCNNGG	5 cut(s)	863, 1286, 1608, 1858, 1991
BseGI	GGATG	4 cut(s)	129, 326, 1357, 1651
BseLI	CCNNNNNNNGG	6 cut(s)	190, 484, 544, 766, 991, 1099
BseMI	GCAATG	2 cut(s)	1246, 1833
BseMII	CTCAG	5 cut(s)	841, 1098, 1142, 1572, 1956
BseNI	ACTGG	7 cut(s)	527, 979, 1119, 1438, 1491, 1525, 1566
BseRI	GAGGAG	3 cut(s)	784, 787, 1349
BseSI	GKGCMC	1 cut(s)	530
BseXI	GCAGC	4 cut(s)	1257, 1438, 1852, 1943
BseYI	CCCAGC	1 cut(s)	1890
BsgI	GTGCAG	1 cut(s)	1580
Bsh1236I	CGCG	2 cut(s)	767, 874
Bsh1285I	CGRYCG	1 cut(s)	195
BshFI	GGCC	2 cut(s)	65, 868
BshNI	GGYRCC	3 cut(s)	547, 1165, 1200
BsiEI	CGRYCG	1 cut(s)	195
BsiSI	CCGG	7 cut(s)	219, 554, 968, 1169, 1193, 1204, 1608
BslFI	GGGAC	1 cut(s)	1578
BslI	CCNNNNNNNGG	6 cut(s)	190, 484, 544, 766, 991, 1099
BsmAI	GTCTC	6 cut(s)	411, 777, 825, 1079, 1128, 1698
BsmFI	GGGAC	1 cut(s)	1578
BsmI	GAATGC	1 cut(s)	1420
BsnI	GGCC	2 cut(s)	65, 868
Bso31I	GGTCTC	1 cut(s)	1128
Bsp1286I	GDGCHC	3 cut(s)	530, 888, 1945
Bsp13I	TCCGGA	1 cut(s)	967
Bsp1407I	TGTACA	1 cut(s)	1444
Bsp143I	GATC	7 cut(s)	394, 411, 1612, 1624, 1830, 1917, 2039
Bsp19I	CCATGG	2 cut(s)	863, 1858
BspACI	CCGC	6 cut(s)	62, 136, 357, 485, 578, 767
BspANI	GGCC	2 cut(s)	65, 868
BspCNI	CTCAG	5 cut(s)	840, 1099, 1141, 1573, 1957
BspEI	TCCGGA	1 cut(s)	967
BspFNI	CGCG	2 cut(s)	767, 874
BspLI	GGNNCC	6 cut(s)	456, 549, 1167, 1202, 1566, 2041
BspPI	GGATC	6 cut(s)	389, 419, 1620, 1925, 2034, 2047
BspT107I	GGYRCC	3 cut(s)	547, 1165, 1200
BspTNI	GGTCTC	1 cut(s)	1128
BsrDI	GCAATG	2 cut(s)	1246, 1833
BsrFI	RCCGGY	1 cut(s)	218
BsrGI	TGTACA	1 cut(s)	1444
BsrI	ACTGG	7 cut(s)	527, 979, 1119, 1438, 1491, 1525, 1566
BssAI	RCCGGY	1 cut(s)	218
BssECI	CCNNGG	5 cut(s)	863, 1286, 1608, 1858, 1991
BssMI	GATC	7 cut(s)	394, 411, 1612, 1624, 1830, 1917, 2039
BssNI	GRCGYC	1 cut(s)	1166
BssSI	CACGAG	2 cut(s)	71, 1656
BssT1I	CCWWGG	3 cut(s)	863, 1858, 1991
Bst2BI	CACGAG	2 cut(s)	71, 1656
Bst2UI	CCWGG	2 cut(s)	1481, 1907
Bst4CI	ACNGT	2 cut(s)	850, 1807
Bst6I	CTCTTC	3 cut(s)	489, 805, 841
BstACI	GRCGYC	1 cut(s)	1166
BstAPI	GCANNNNNTGC	2 cut(s)	534, 1799
BstAUI	TGTACA	1 cut(s)	1444
BstBAI	YACGTR	1 cut(s)	1913
BstC8I	GCNNGC	2 cut(s)	1067, 1538
BstDEI	CTNAG	5 cut(s)	827, 1107, 1128, 1581, 1965
BstDSI	CCRYGG	2 cut(s)	863, 1858
BstF5I	GGATG	4 cut(s)	129, 326, 1357, 1651
BstFNI	CGCG	2 cut(s)	767, 874
BstH2I	RGCGCY	2 cut(s)	1169, 1965
BstHHI	GCGC	4 cut(s)	876, 1168, 1230, 1964
BstKTI	GATC	7 cut(s)	397, 414, 1615, 1627, 1833, 1920, 2042
BstMAI	GTCTC	6 cut(s)	411, 777, 825, 1079, 1128, 1698
BstMBI	GATC	7 cut(s)	394, 411, 1612, 1624, 1830, 1917, 2039
BstMCI	CGRYCG	1 cut(s)	195
BstMWI	GCNNNNNNNGC	7 cut(s)	215, 275, 534, 951, 1236, 1799, 1940
BstNI	CCWGG	2 cut(s)	1481, 1907
BstNSI	RCATGY	2 cut(s)	386, 1451
BstSCI	CCNGG	4 cut(s)	1203, 1479, 1607, 1905
BstSLI	GKGCMC	1 cut(s)	530
BstUI	CGCG	2 cut(s)	767, 874
BstV1I	GCAGC	4 cut(s)	1257, 1438, 1852, 1943
BstV2I	GAAGAC	2 cut(s)	139, 1775
BstX2I	RGATCY	2 cut(s)	1624, 2039
BstYI	RGATCY	2 cut(s)	1624, 2039
BsuRI	GGCC	2 cut(s)	65, 868
BtgI	CCRYGG	2 cut(s)	863, 1858
BtrI	CACGTC	1 cut(s)	906
BtsCI	GGATG	4 cut(s)	129, 326, 1357, 1651
BtsIMutI	CAGTG	2 cut(s)	520, 1578
Cac8I	GCNNGC	2 cut(s)	1067, 1538
CaiI	CAGNNNCTG	1 cut(s)	1561
CfoI	GCGC	4 cut(s)	876, 1168, 1230, 1964
Cfr10I	RCCGGY	1 cut(s)	218
Cfr13I	GGNCC	3 cut(s)	569, 1146, 1565
CseI	GACGC	1 cut(s)	13
Csp6I	GTAC	4 cut(s)	199, 1445, 1494, 1518
CviAII	CATG	5 cut(s)	383, 864, 1448, 1550, 1859
CviQI	GTAC	4 cut(s)	199, 1445, 1494, 1518
DdeI	CTNAG	5 cut(s)	827, 1107, 1128, 1581, 1965
DinI	GGCGCC	1 cut(s)	1167
DpnI	GATC	7 cut(s)	396, 413, 1614, 1626, 1832, 1919, 2041
DpnII	GATC	7 cut(s)	394, 411, 1612, 1624, 1830, 1917, 2039
DraI	TTTAAA	1 cut(s)	1926
DraIII	CACNNNGTG	2 cut(s)	534, 1799
DriI	GACNNNNNGTC	1 cut(s)	1258
EaeI	YGGCCR	1 cut(s)	63
Eam1104I	CTCTTC	3 cut(s)	489, 805, 841
Eam1105I	GACNNNNNGTC	1 cut(s)	1258
EarI	CTCTTC	3 cut(s)	489, 805, 841
Eco130I	CCWWGG	3 cut(s)	863, 1858, 1991
Eco24I	GRGCYC	2 cut(s)	888, 1945
Eco31I	GGTCTC	1 cut(s)	1128
Eco47I	GGWCC	3 cut(s)	569, 1146, 1565
Eco57I	CTGAAG	2 cut(s)	1722, 1811
Eco72I	CACGTG	1 cut(s)	1913
EcoO109I	RGGNCCY	1 cut(s)	1565
EcoRII	CCWGG	2 cut(s)	1479, 1905
EcoT14I	CCWWGG	3 cut(s)	863, 1858, 1991
EcoT22I	ATGCAT	1 cut(s)	313
EcoT38I	GRGCYC	2 cut(s)	888, 1945
EgeI	GGCGCC	1 cut(s)	1167
EheI	GGCGCC	1 cut(s)	1167
ErhI	CCWWGG	3 cut(s)	863, 1858, 1991
FaeI	CATG	5 cut(s)	386, 867, 1451, 1553, 1862
FalI	AAGNNNNNCTT	2 cut(s)	1259, 1291
FaqI	GGGAC	1 cut(s)	1578
FatI	CATG	5 cut(s)	382, 863, 1447, 1549, 1858
FauNDI	CATATG	2 cut(s)	19, 1498
Fnu4HI	GCNGC	6 cut(s)	63, 579, 1271, 1452, 1866, 1932
FokI	GGATG	4 cut(s)	136, 313, 1364, 1638
FriOI	GRGCYC	2 cut(s)	888, 1945
Fsp4HI	GCNGC	6 cut(s)	63, 579, 1271, 1452, 1866, 1932
FspBI	CTAG	4 cut(s)	170, 482, 491, 1880
GlaI	GCGC	4 cut(s)	875, 1167, 1229, 1963
GluI	GCNGC	6 cut(s)	63, 579, 1271, 1452, 1866, 1932
GsaI	CCCAGC	1 cut(s)	1894
GsuI	CTGGAG	1 cut(s)	1091
HaeII	RGCGCY	2 cut(s)	1169, 1965
HaeIII	GGCC	2 cut(s)	65, 868
HapII	CCGG	7 cut(s)	219, 554, 968, 1169, 1193, 1204, 1608
HgaI	GACGC	1 cut(s)	13
HhaI	GCGC	4 cut(s)	876, 1168, 1230, 1964
Hin1I	GRCGYC	1 cut(s)	1166
Hin1II	CATG	5 cut(s)	386, 867, 1451, 1553, 1862
Hin6I	GCGC	4 cut(s)	874, 1166, 1228, 1962
HinP1I	GCGC	4 cut(s)	874, 1166, 1228, 1962
HincII	GTYRAC	3 cut(s)	240, 1375, 1738
HindII	GTYRAC	3 cut(s)	240, 1375, 1738
HindIII	AAGCTT	1 cut(s)	952
HpaI	GTTAAC	1 cut(s)	1375
HpaII	CCGG	7 cut(s)	219, 554, 968, 1169, 1193, 1204, 1608
HphI	GGTGA	8 cut(s)	65, 274, 406, 749, 889, 1046, 1262, 1981
Hpy166II	GTNNAC	7 cut(s)	201, 240, 520, 757, 1375, 1467, 1738
Hpy188III	TCNNGA	8 cut(s)	86, 160, 776, 916, 968, 1093, 1510, 1668
Hpy8I	GTNNAC	7 cut(s)	201, 240, 520, 757, 1375, 1467, 1738
Hpy99I	CGWCG	1 cut(s)	782
HpyCH4III	ACNGT	2 cut(s)	850, 1807
HpyCH4IV	ACGT	2 cut(s)	905, 1912
HpyCH4V	TGCA	7 cut(s)	79, 311, 1597, 1686, 1748, 1793, 1868
HpyF10VI	GCNNNNNNNGC	7 cut(s)	215, 275, 534, 951, 1236, 1799, 1940
HpyF3I	CTNAG	5 cut(s)	827, 1107, 1128, 1581, 1965
HpySE526I	ACGT	2 cut(s)	905, 1912
Hsp92I	GRCGYC	1 cut(s)	1166
Hsp92II	CATG	5 cut(s)	386, 867, 1451, 1553, 1862
HspAI	GCGC	4 cut(s)	874, 1166, 1228, 1962
KasI	GGCGCC	1 cut(s)	1165
Kpn2I	TCCGGA	1 cut(s)	967
KspAI	GTTAAC	1 cut(s)	1375
Kzo9I	GATC	7 cut(s)	394, 411, 1612, 1624, 1830, 1917, 2039
LmnI	GCTCC	5 cut(s)	430, 460, 487, 1072, 1862
Lsp1109I	GCAGC	4 cut(s)	1257, 1438, 1852, 1943
LweI	GCATC	5 cut(s)	49, 66, 112, 298, 430
MaeI	CTAG	4 cut(s)	170, 482, 491, 1880
MaeII	ACGT	2 cut(s)	905, 1912
MaeIII	GTNAC	5 cut(s)	13, 505, 1250, 1260, 1874
MalI	GATC	7 cut(s)	396, 413, 1614, 1626, 1832, 1919, 2041
MboI	GATC	7 cut(s)	394, 411, 1612, 1624, 1830, 1917, 2039
MfeI	CAATTG	1 cut(s)	253
MflI	RGATCY	2 cut(s)	1624, 2039
MhlI	GDGCHC	3 cut(s)	530, 888, 1945
Mly113I	GGCGCC	1 cut(s)	1166
MlyI	GAGTC	8 cut(s)	29, 153, 413, 776, 779, 827, 1171, 2023
MmeI	TCCRAC	4 cut(s)	354, 706, 1378, 2013
Mph1103I	ATGCAT	1 cut(s)	313
MroI	TCCGGA	1 cut(s)	967
MseI	TTAA	5 cut(s)	1152, 1374, 1815, 1925, 2022
MslI	CAYNNNNRTG	2 cut(s)	316, 1425
MspA1I	CMGCKG	1 cut(s)	736
MspI	CCGG	7 cut(s)	219, 554, 968, 1169, 1193, 1204, 1608
MspR9I	CCNGG	4 cut(s)	1205, 1481, 1609, 1907
MunI	CAATTG	1 cut(s)	253
Mva1269I	GAATGC	1 cut(s)	1420
MvaI	CCWGG	2 cut(s)	1481, 1907
MvnI	CGCG	2 cut(s)	767, 874
MwoI	GCNNNNNNNGC	7 cut(s)	215, 275, 534, 951, 1236, 1799, 1940
NarI	GGCGCC	1 cut(s)	1166
NciI	CCSGG	2 cut(s)	1205, 1609
NcoI	CCATGG	2 cut(s)	863, 1858
NdeI	CATATG	2 cut(s)	19, 1498
NdeII	GATC	7 cut(s)	394, 411, 1612, 1624, 1830, 1917, 2039
NlaIII	CATG	5 cut(s)	386, 867, 1451, 1553, 1862
NlaIV	GGNNCC	6 cut(s)	456, 549, 1167, 1202, 1566, 2041
NmuCI	GTSAC	3 cut(s)	1250, 1260, 1874
NsiI	ATGCAT	1 cut(s)	313
NspI	RCATGY	2 cut(s)	386, 1451
PcsI	WCGNNNNNNNCGW	1 cut(s)	750
PctI	GAATGC	1 cut(s)	1420
PfeI	GAWTC	5 cut(s)	163, 894, 1213, 1282, 1484
PkrI	GCNGC	6 cut(s)	64, 580, 1272, 1453, 1867, 1933
PleI	GAGTC	8 cut(s)	29, 152, 412, 776, 778, 827, 1171, 2022
PluTI	GGCGCC	1 cut(s)	1169
PmaCI	CACGTG	1 cut(s)	1913
PmlI	CACGTG	1 cut(s)	1913
PpsI	GAGTC	8 cut(s)	29, 152, 412, 776, 778, 827, 1171, 2022
Ppu21I	YACGTR	1 cut(s)	1913
PpuMI	RGGWCCY	1 cut(s)	1565
PshBI	ATTAAT	1 cut(s)	1152
Psp5II	RGGWCCY	1 cut(s)	1565
Psp6I	CCWGG	2 cut(s)	1479, 1905
PspCI	CACGTG	1 cut(s)	1913
PspFI	CCCAGC	1 cut(s)	1890
PspGI	CCWGG	2 cut(s)	1479, 1905
PspN4I	GGNNCC	6 cut(s)	456, 549, 1167, 1202, 1566, 2041
PspPI	GGNCC	3 cut(s)	569, 1146, 1565
PspPPI	RGGWCCY	1 cut(s)	1565
PstNI	CAGNNNCTG	1 cut(s)	1561
PsuI	RGATCY	2 cut(s)	1624, 2039
PvuII	CAGCTG	1 cut(s)	736
RsaI	GTAC	4 cut(s)	200, 1446, 1495, 1519
RsaNI	GTAC	4 cut(s)	199, 1445, 1494, 1518
RseI	CAYNNNNRTG	2 cut(s)	316, 1425
SaqAI	TTAA	5 cut(s)	1152, 1374, 1815, 1925, 2022
SatI	GCNGC	6 cut(s)	63, 579, 1271, 1452, 1866, 1932
Sau3AI	GATC	7 cut(s)	394, 411, 1612, 1624, 1830, 1917, 2039
Sau96I	GGNCC	3 cut(s)	569, 1146, 1565
ScaI	AGTACT	1 cut(s)	1519
SchI	GAGTC	8 cut(s)	29, 153, 413, 776, 779, 827, 1171, 2023
ScrFI	CCNGG	4 cut(s)	1205, 1481, 1609, 1907
SduI	GDGCHC	3 cut(s)	530, 888, 1945
SfaNI	GCATC	5 cut(s)	49, 66, 112, 298, 430
SfoI	GGCGCC	1 cut(s)	1167
SinI	GGWCC	3 cut(s)	569, 1146, 1565
SmiMI	CAYNNNNRTG	2 cut(s)	316, 1425
SpeI	ACTAGT	1 cut(s)	169
SsiI	CCGC	6 cut(s)	62, 136, 357, 485, 578, 767
SspDI	GGCGCC	1 cut(s)	1165
SspMI	CTAG	4 cut(s)	170, 482, 491, 1880
StyD4I	CCNGG	4 cut(s)	1203, 1479, 1607, 1905
StyI	CCWWGG	3 cut(s)	863, 1858, 1991
TaaI	ACNGT	2 cut(s)	850, 1807
TaiI	ACGT	2 cut(s)	908, 1915
TaqI	TCGA	9 cut(s)	174, 195, 342, 562, 777, 892, 1002, 1280, 1509
TaqII	GACCGA	1 cut(s)	181
TatI	WGTACW	4 cut(s)	198, 1444, 1493, 1517
TauI	GCSGC	2 cut(s)	65, 581
TfiI	GAWTC	5 cut(s)	163, 894, 1213, 1282, 1484
Tru1I	TTAA	5 cut(s)	1152, 1374, 1815, 1925, 2022
Tru9I	TTAA	5 cut(s)	1152, 1374, 1815, 1925, 2022
TscAI	CASTG	2 cut(s)	527, 1585
TseFI	GTSAC	3 cut(s)	1250, 1260, 1874
TseI	GCWGC	4 cut(s)	1270, 1451, 1865, 1931
Tsp45I	GTSAC	3 cut(s)	1250, 1260, 1874
TspDTI	ATGAA	3 cut(s)	901, 1257, 1667
TspGWI	ACGGA	1 cut(s)	829
TspRI	CASTG	2 cut(s)	527, 1585
VpaK11BI	GGWCC	3 cut(s)	569, 1146, 1565
VspI	ATTAAT	1 cut(s)	1152
XapI	RAATTY	2 cut(s)	1018, 1027
XceI	RCATGY	2 cut(s)	386, 1451
XspI	CTAG	4 cut(s)	170, 482, 491, 1880
ZrmI	AGTACT	1 cut(s)	1519
Zsp2I	ATGCAT	1 cut(s)	313

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.