Prupe.1G567000_v2.0.a1

elongation of fatty acids protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0013056
Physical Location & Seq
Reverse (-)
46280464 .. 46281273
810 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G567000.1

Sequence Viewer

Length: 810 bp
ATGGACCTCAACATGAACCTCAACATCTCAACTACCTTTCAGTATTGGCTTGTGAAGCACCCAGCCATCCTGCACTTCTCATGGAGCCCTAGTGAAACCCCGGCCTCAAGCCCACTCTTCCTATCCCTAACTATCATCGCCTACCTCGCCCTCACTTTCCTCCTCTCCCACCTCCCTCTCCCACTTATCAAACCCCGCCGCCTCAAACCCATCACCGCCGTCCACAACCTCAACCTCCTCCTCCTCTCCCTCATCATGGCCGTTGGTTCCCTGGTCTCCATCTTCTCCTACGCACCTTACCCTTTCTGGATCATCTGCTTCCCACCCAAAACCCCACCAACGGGGCCTCTCTTCTTCTGGGCGTACATCTTCTACCTCTCCAAAATCTACGAGTTTGTGGACACCTTCTTGATCATCCTTAGTGGGTCCTTTCAACGGCTGACATTCCTCCATGTGTACCACCACACAATGGTGCTGGTCATGTGCTACATTTGGCTCCACACCTCACAGTCTCTGTTCCCGGCGGTGATCGTAGCAAACGCCACGGTGCACGTGGTGATGTACACCTACTACTTGCTGGCTGCGCTTGGGGTGAGGCCTAAGTGGAAGAGGAGGGTCACCGAGTTTCAAATATTTCAGTTCATGTCAAGCTTCGTGGGGTTGGTTTGGATGCTCATCTATCACTTTAACGGGTCGGGTTGCTGCGGGATCTGGGGATGGTGCTTCAATATTTTTTTCTATGTTTCTCTTTTGGCTTTGTTCATGGACTTCCATGCTAAGAGTTATGGCAGCTCCAAGAAGGATTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00062 ko01110 map00062 map01110
Pfam Domains
Protein Families
ELO

Protein Analysis

270

Amino Acids

31.11

Weight (kDa)

9.35

Isoelectric Point (pI)

41.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 469
AciI CCGC 5 cut(s) 196, 199, 216, 524, 705
AclWI GGATC 2 cut(s) 317, 716
AcoI YGGCCR 1 cut(s) 258
AcvI CACGTG 1 cut(s) 553
AdeI CACNNNGTG 1 cut(s) 556
AfaI GTAC 3 cut(s) 365, 458, 563
AfiI CCNNNNNNNGG 5 cut(s) 256, 340, 341, 435, 469
AgsI TTSAA 3 cut(s) 434, 629, 727
AjnI CCWGG 1 cut(s) 270
AleI CACNNNNGTG 1 cut(s) 470
AluBI AGCT 2 cut(s) 651, 792
AluI AGCT 2 cut(s) 651, 792
Alw21I GWGCWC 1 cut(s) 552
Alw26I GTCTC 2 cut(s) 280, 516
Alw44I GTGCAC 1 cut(s) 548
AlwI GGATC 2 cut(s) 317, 716
AlwNI CAGNNNCTG 1 cut(s) 514
AoxI GGCC 4 cut(s) 102, 258, 344, 596
ApaLI GTGCAC 1 cut(s) 548
ApeKI GCWGC 3 cut(s) 581, 702, 789
AspLEI GCGC 1 cut(s) 586
AspS9I GGNCC 3 cut(s) 4, 344, 426
AsuC2I CCSGG 2 cut(s) 101, 521
AsuHPI GGTGA 5 cut(s) 205, 538, 568, 604, 610
AvaII GGWCC 2 cut(s) 4, 426
BaeGI GKGCMC 1 cut(s) 552
BanII GRGCYC 1 cut(s) 89
BbrPI CACGTG 1 cut(s) 553
Bbv12I GWGCWC 1 cut(s) 552
BbvI GCAGC 3 cut(s) 568, 689, 801
BccI CCATC 4 cut(s) 74, 218, 287, 711
BceAI ACGGC 3 cut(s) 203, 245, 452
BciT130I CCWGG 1 cut(s) 272
BclI TGATCA 1 cut(s) 411
BcnI CCSGG 2 cut(s) 101, 521
BcoDI GTCTC 2 cut(s) 280, 516
BfaI CTAG 1 cut(s) 90
BisI GCNGC 4 cut(s) 199, 582, 703, 790
BlsI GCNGC 4 cut(s) 200, 583, 704, 791
Bme1390I CCNGG 3 cut(s) 101, 272, 521
Bme18I GGWCC 2 cut(s) 4, 426
BmgT120I GGNCC 3 cut(s) 4, 344, 426
BmiI GGNNCC 5 cut(s) 86, 268, 345, 427, 497
BmrFI CCNGG 3 cut(s) 101, 272, 521
BmsI GCATC 1 cut(s) 660
BpuEI CTTGAG 1 cut(s) 91
BpuMI CCSGG 2 cut(s) 101, 521
BsaAI YACGTR 1 cut(s) 553
BsaBI GATNNNNATC 1 cut(s) 674
BsaI GGTCTC 1 cut(s) 280
BsaJI CCNNGG 3 cut(s) 99, 270, 543
BsaXI ACNNNNNCTCC 2 cut(s) 76, 106
Bsc4I CCNNNNNNNGG 5 cut(s) 256, 340, 341, 435, 469
Bse8I GATNNNNATC 1 cut(s) 674
BseBI CCWGG 1 cut(s) 272
BseDI CCNNGG 3 cut(s) 99, 270, 543
BseGI GGATG 4 cut(s) 66, 414, 675, 722
BseJI GATNNNNATC 1 cut(s) 674
BseLI CCNNNNNNNGG 5 cut(s) 256, 340, 341, 435, 469
BseRI GAGGAG 5 cut(s) 152, 227, 230, 233, 625
BseSI GKGCMC 1 cut(s) 552
BseXI GCAGC 3 cut(s) 568, 689, 801
BseYI CCCAGC 1 cut(s) 61
BsgI GTGCAG 1 cut(s) 56
BshFI GGCC 4 cut(s) 104, 260, 346, 598
BsiHKAI GWGCWC 1 cut(s) 552
BsiSI CCGG 2 cut(s) 101, 521
BslI CCNNNNNNNGG 5 cut(s) 256, 340, 341, 435, 469
BsmAI GTCTC 2 cut(s) 280, 516
BsnI GGCC 4 cut(s) 104, 260, 346, 598
Bso31I GGTCTC 1 cut(s) 280
Bsp1286I GDGCHC 2 cut(s) 89, 552
Bsp1407I TGTACA 1 cut(s) 561
Bsp143I GATC 4 cut(s) 309, 411, 528, 708
BspACI CCGC 5 cut(s) 196, 199, 216, 524, 705
BspANI GGCC 4 cut(s) 104, 260, 346, 598
BspLI GGNNCC 5 cut(s) 86, 268, 345, 427, 497
BspPI GGATC 2 cut(s) 317, 716
BspTNI GGTCTC 1 cut(s) 280
BsrGI TGTACA 1 cut(s) 561
BssECI CCNNGG 3 cut(s) 99, 270, 543
BssMI GATC 4 cut(s) 309, 411, 528, 708
Bst2UI CCWGG 1 cut(s) 272
Bst4CI ACNGT 2 cut(s) 510, 547
Bst6I CTCTTC 3 cut(s) 122, 356, 602
BstAUI TGTACA 1 cut(s) 561
BstBAI YACGTR 1 cut(s) 553
BstC8I GCNNGC 1 cut(s) 579
BstDEI CTNAG 3 cut(s) 419, 600, 777
BstDSI CCRYGG 1 cut(s) 543
BstEII GGTNACC 1 cut(s) 616
BstF5I GGATG 4 cut(s) 66, 414, 675, 722
BstHHI GCGC 1 cut(s) 586
BstKTI GATC 4 cut(s) 312, 414, 531, 711
BstMAI GTCTC 2 cut(s) 280, 516
BstMBI GATC 4 cut(s) 309, 411, 528, 708
BstMWI GCNNNNNNNGC 3 cut(s) 55, 146, 583
BstNI CCWGG 1 cut(s) 272
BstPI GGTNACC 1 cut(s) 616
BstSCI CCNGG 3 cut(s) 99, 270, 519
BstSLI GKGCMC 1 cut(s) 552
BstV1I GCAGC 3 cut(s) 568, 689, 801
BstX2I RGATCY 1 cut(s) 708
BstYI RGATCY 1 cut(s) 708
BsuRI GGCC 4 cut(s) 104, 260, 346, 598
BtgI CCRYGG 1 cut(s) 543
BtgZI GCGATG 1 cut(s) 121
BtsCI GGATG 4 cut(s) 66, 414, 675, 722
Cac8I GCNNGC 1 cut(s) 579
CaiI CAGNNNCTG 1 cut(s) 514
CfoI GCGC 1 cut(s) 586
Cfr13I GGNCC 3 cut(s) 4, 344, 426
Csp6I GTAC 3 cut(s) 364, 457, 562
CspCI CAANNNNNGTGG 2 cut(s) 636, 671
CviAII CATG 8 cut(s) 13, 81, 256, 452, 481, 643, 763, 773
CviQI GTAC 3 cut(s) 364, 457, 562
DdeI CTNAG 3 cut(s) 419, 600, 777
DpnI GATC 4 cut(s) 311, 413, 530, 710
DpnII GATC 4 cut(s) 309, 411, 528, 708
DraIII CACNNNGTG 1 cut(s) 556
EaeI YGGCCR 1 cut(s) 258
Eam1104I CTCTTC 3 cut(s) 122, 356, 602
EarI CTCTTC 3 cut(s) 122, 356, 602
Eco147I AGGCCT 1 cut(s) 598
Eco24I GRGCYC 1 cut(s) 89
Eco31I GGTCTC 1 cut(s) 280
Eco47I GGWCC 2 cut(s) 4, 426
Eco72I CACGTG 1 cut(s) 553
Eco91I GGTNACC 1 cut(s) 616
EcoO109I RGGNCCY 2 cut(s) 344, 426
EcoO65I GGTNACC 1 cut(s) 616
EcoRII CCWGG 1 cut(s) 270
EcoT38I GRGCYC 1 cut(s) 89
FaeI CATG 8 cut(s) 16, 84, 259, 455, 484, 646, 766, 776
FatI CATG 8 cut(s) 12, 80, 255, 451, 480, 642, 762, 772
FauI CCCGC 2 cut(s) 203, 698
FbaI TGATCA 1 cut(s) 411
Fnu4HI GCNGC 4 cut(s) 199, 582, 703, 790
FokI GGATG 4 cut(s) 53, 401, 682, 729
FriOI GRGCYC 1 cut(s) 89
Fsp4HI GCNGC 4 cut(s) 199, 582, 703, 790
FspBI CTAG 1 cut(s) 90
GlaI GCGC 1 cut(s) 585
GluI GCNGC 4 cut(s) 199, 582, 703, 790
GsaI CCCAGC 1 cut(s) 65
HaeIII GGCC 4 cut(s) 104, 260, 346, 598
HapII CCGG 2 cut(s) 101, 521
HhaI GCGC 1 cut(s) 586
Hin1II CATG 8 cut(s) 16, 84, 259, 455, 484, 646, 766, 776
Hin6I GCGC 1 cut(s) 584
HinP1I GCGC 1 cut(s) 584
HindIII AAGCTT 1 cut(s) 649
HpaII CCGG 2 cut(s) 101, 521
HphI GGTGA 5 cut(s) 205, 538, 568, 604, 610
Hpy166II GTNNAC 5 cut(s) 223, 400, 457, 550, 564
Hpy188III TCNNGA 2 cut(s) 307, 409
Hpy8I GTNNAC 5 cut(s) 223, 400, 457, 550, 564
HpyAV CCTTC 2 cut(s) 415, 793
HpyCH4III ACNGT 2 cut(s) 510, 547
HpyCH4IV ACGT 1 cut(s) 552
HpyCH4V TGCA 2 cut(s) 73, 550
HpyF10VI GCNNNNNNNGC 3 cut(s) 55, 146, 583
HpyF3I CTNAG 3 cut(s) 419, 600, 777
HpySE526I ACGT 1 cut(s) 552
Hsp92II CATG 8 cut(s) 16, 84, 259, 455, 484, 646, 766, 776
HspAI GCGC 1 cut(s) 584
Ksp22I TGATCA 1 cut(s) 411
Kzo9I GATC 4 cut(s) 309, 411, 528, 708
LmnI GCTCC 3 cut(s) 84, 501, 797
Lsp1109I GCAGC 3 cut(s) 568, 689, 801
LweI GCATC 1 cut(s) 660
MaeI CTAG 1 cut(s) 90
MaeII ACGT 1 cut(s) 552
MaeIII GTNAC 1 cut(s) 616
MalI GATC 4 cut(s) 311, 413, 530, 710
MboI GATC 4 cut(s) 309, 411, 528, 708
MboII GAAGA 6 cut(s) 109, 274, 343, 346, 361, 619
MflI RGATCY 1 cut(s) 708
MhlI GDGCHC 2 cut(s) 89, 552
MseI TTAA 1 cut(s) 687
MslI CAYNNNNRTG 1 cut(s) 470
MspI CCGG 2 cut(s) 101, 521
MspR9I CCNGG 3 cut(s) 101, 272, 521
MvaI CCWGG 1 cut(s) 272
MwoI GCNNNNNNNGC 3 cut(s) 55, 146, 583
NciI CCSGG 2 cut(s) 101, 521
NdeII GATC 4 cut(s) 309, 411, 528, 708
NlaIII CATG 8 cut(s) 16, 84, 259, 455, 484, 646, 766, 776
NlaIV GGNNCC 5 cut(s) 86, 268, 345, 427, 497
NmuCI GTSAC 1 cut(s) 616
OliI CACNNNNGTG 1 cut(s) 470
PceI AGGCCT 1 cut(s) 598
PflMI CCANNNNNTGG 1 cut(s) 469
PkrI GCNGC 4 cut(s) 200, 583, 704, 791
PmaCI CACGTG 1 cut(s) 553
PmlI CACGTG 1 cut(s) 553
Ppu21I YACGTR 1 cut(s) 553
PpuMI RGGWCCY 1 cut(s) 426
Psp5II RGGWCCY 1 cut(s) 426
Psp6I CCWGG 1 cut(s) 270
PspCI CACGTG 1 cut(s) 553
PspEI GGTNACC 1 cut(s) 616
PspFI CCCAGC 1 cut(s) 61
PspGI CCWGG 1 cut(s) 270
PspN4I GGNNCC 5 cut(s) 86, 268, 345, 427, 497
PspPI GGNCC 3 cut(s) 4, 344, 426
PspPPI RGGWCCY 1 cut(s) 426
PstNI CAGNNNCTG 1 cut(s) 514
PsuI RGATCY 1 cut(s) 708
RsaI GTAC 3 cut(s) 365, 458, 563
RsaNI GTAC 3 cut(s) 364, 457, 562
RseI CAYNNNNRTG 1 cut(s) 470
SaqAI TTAA 1 cut(s) 687
SatI GCNGC 4 cut(s) 199, 582, 703, 790
Sau3AI GATC 4 cut(s) 309, 411, 528, 708
Sau96I GGNCC 3 cut(s) 4, 344, 426
ScrFI CCNGG 3 cut(s) 101, 272, 521
SduI GDGCHC 2 cut(s) 89, 552
SfaNI GCATC 1 cut(s) 660
SinI GGWCC 2 cut(s) 4, 426
SmiMI CAYNNNNRTG 1 cut(s) 470
SmlI CTYRAG 1 cut(s) 106
SmoI CTYRAG 1 cut(s) 106
SseBI AGGCCT 1 cut(s) 598
SsiI CCGC 5 cut(s) 196, 199, 216, 524, 705
SspI AATATT 2 cut(s) 633, 730
SspMI CTAG 1 cut(s) 90
StuI AGGCCT 1 cut(s) 598
StyD4I CCNGG 3 cut(s) 99, 270, 519
TaaI ACNGT 2 cut(s) 510, 547
TaiI ACGT 1 cut(s) 555
TatI WGTACW 1 cut(s) 561
TauI GCSGC 1 cut(s) 201
Tru1I TTAA 1 cut(s) 687
Tru9I TTAA 1 cut(s) 687
TseFI GTSAC 1 cut(s) 616
TseI GCWGC 3 cut(s) 581, 702, 789
Tsp45I GTSAC 1 cut(s) 616
TspDTI ATGAA 3 cut(s) 29, 631, 751
Van91I CCANNNNNTGG 1 cut(s) 469
VneI GTGCAC 1 cut(s) 548
VpaK11BI GGWCC 2 cut(s) 4, 426
XcmI CCANNNNNNNNNTGG 1 cut(s) 550
XspI CTAG 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.