Prupe.1G583200_v2.0.a1

Protein of unknown function (DUF707)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0004588
Physical Location & Seq
Forward (+)
47355820 .. 47362297
6478 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G583200.3

Sequence Viewer

Length: 1248 bp
ATGATCAACCTTTTCAATCCTGCCTCCGCACTGCCAGATCCAAAGAACAGATCTTTCTATTGCAGTCTCTTCATTGTAGCTTCATTGATCTGTGGTGCTTACTTCATTGGTGGTGCATCCATTGCTAAGGAGTATAAGGAGAGATTAACAAGATGGAAAGTGATCTACACTAGGCAGAACACAAAGTTTGATACATGCAAGAACCGTTGCCAGCCTTTGGGGAGTGAGGCACTACCAGAAGGAATTGTTGCCAAAACGTCGGACTTGGAAGTGCGGCCTTTATGGGGCTCGTCTGTGAATAATGAAAACTCAAAACCTTCTATGAGCTTGCTGGCAATTGCAGTTGGAATAAAGCAGAAAGAAATAGTAGACAGAATTGTTAAAAAGTTTCTATCAAGTGATTTTGTTGTAATGCTTTTTCATTATGATGGTGCTGTGGATAAATGGAGAGATTTAAATTGGAGTGATCGTGCCATACACGTGTCTGTGATGAATCAAACTAAATGGTGGTTCGCCAAGCGTTTCTTGCATCCAGATATAGTTTCCGAGTATGAATATATTTTTCTTTGGGATGAGGACCTTGGAGTTGAAAATTTTGACCCGAAACGATATCTATCCATTGTTCGGGAAGAGGGACTTGAAATATCACAGCCAGCACTTGATCCTGACAAGTCAGATGTGTATCATCCAATTACTGCACGTGTGAAGAAATTAAAAGTGCACAGAAGGTTTTATAAGTTTAAAGGCAGTGGAAGGTGTGACAACCACAGCTCTGCTCCTCCGTGTGCAGGTTGGGTGGAAATGATGGCACCTGTATTTTCAAAAGCTGCTTGGCAATGTGTATGGTACATGATCCAGAATGACTTGATCCATGCATGGGGCCTGGACGTGCAGCTTGGTTATTGTGCACAAGGAGATCGAACAAAAAATGTTGGTGTGGTTGACTCTGAATATATAGTTCATCTTGGTCTTCCTACACTTGGTGTCTCAGATGGAAATAAGGTGACTAATGCTCCAGCTCCTCCTCAGAAAGGGGACCCCGAAGCATTGGACATCCATCACGCAAAATGCATGGTTGGTGGCCCTTCTTATACACAGACAACAGAAATCAGACTCACATCACTGTGCATACAATTACCGCGTGAGACAATATATCGCAAACGACATATAGAATTTTCTGGTGATGCAGATTCGTTTCAAACAGCTGACGACAACTATTTGAAGACTGACATGGAAGTTGTGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF707

Protein Analysis

416

Amino Acids

47.11

Weight (kDa)

7.14

Isoelectric Point (pI)

33.88

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 735
Acc36I ACCTGC 1 cut(s) 779
AccB1I GGYRCC 1 cut(s) 808
AccB7I CCANNNNNTGG 1 cut(s) 217
AccI GTMKAC 1 cut(s) 369
AccII CGCG 1 cut(s) 1141
AciI CCGC 3 cut(s) 27, 274, 1139
AclWI GGATC 4 cut(s) 32, 656, 847, 862
AcsI RAATTY 2 cut(s) 592, 1172
AcvI CACGTG 2 cut(s) 481, 701
AdeI CACNNNGTG 1 cut(s) 983
AfaI GTAC 1 cut(s) 848
AfiI CCNNNNNNNGG 7 cut(s) 217, 284, 624, 788, 877, 980, 1031
AflIII ACRYGT 3 cut(s) 478, 480, 700
AgsI TTSAA 6 cut(s) 16, 590, 641, 822, 1199, 1222
AjiI CACGTC 1 cut(s) 889
AjnI CCWGG 1 cut(s) 882
AluBI AGCT 7 cut(s) 80, 327, 771, 827, 895, 1019, 1205
AluI AGCT 7 cut(s) 80, 327, 771, 827, 895, 1019, 1205
Alw21I GWGCWC 2 cut(s) 723, 910
Alw26I GTCTC 3 cut(s) 71, 991, 1139
Alw44I GTGCAC 2 cut(s) 719, 906
AlwI GGATC 4 cut(s) 32, 656, 847, 862
AoxI GGCC 3 cut(s) 275, 880, 1081
ApaLI GTGCAC 2 cut(s) 719, 906
ApeKI GCWGC 2 cut(s) 827, 892
ApoI RAATTY 2 cut(s) 592, 1172
AspS9I GGNCC 4 cut(s) 577, 880, 1036, 1082
AsuHPI GGTGA 2 cut(s) 1015, 1193
AvaII GGWCC 2 cut(s) 577, 1036
BaeGI GKGCMC 2 cut(s) 723, 910
BanI GGYRCC 1 cut(s) 808
BanII GRGCYC 1 cut(s) 290
BbrPI CACGTG 2 cut(s) 481, 701
BbsI GAAGAC 2 cut(s) 962, 1229
Bbv12I GWGCWC 2 cut(s) 723, 910
BbvI GCAGC 2 cut(s) 814, 904
BccI CCATC 5 cut(s) 147, 422, 799, 986, 1065
BciT130I CCWGG 1 cut(s) 884
BclI TGATCA 1 cut(s) 3
BcoDI GTCTC 3 cut(s) 71, 991, 1139
BfaI CTAG 1 cut(s) 171
BfuAI ACCTGC 1 cut(s) 779
BglII AGATCT 1 cut(s) 50
BisI GCNGC 3 cut(s) 275, 828, 893
BlsI GCNGC 3 cut(s) 276, 829, 894
Bme1390I CCNGG 1 cut(s) 884
Bme18I GGWCC 2 cut(s) 577, 1036
BmgBI CACGTC 1 cut(s) 889
BmgT120I GGNCC 4 cut(s) 577, 880, 1036, 1082
BmiI GGNNCC 4 cut(s) 810, 881, 1037, 1038
BmrFI CCNGG 1 cut(s) 884
BmsI GCATC 3 cut(s) 125, 538, 1174
BpiI GAAGAC 2 cut(s) 962, 1229
BpmI CTGGAG 1 cut(s) 999
Bpu10I CCTNAGC 1 cut(s) 126
BsaAI YACGTR 2 cut(s) 481, 701
BsaBI GATNNNNATC 2 cut(s) 613, 681
BsaJI CCNNGG 1 cut(s) 580
BsaXI ACNNNNNCTCC 4 cut(s) 454, 484, 997, 1027
Bsc4I CCNNNNNNNGG 7 cut(s) 217, 284, 624, 788, 877, 980, 1031
Bse3DI GCAATG 2 cut(s) 120, 842
Bse8I GATNNNNATC 2 cut(s) 613, 681
BseBI CCWGG 1 cut(s) 884
BseDI CCNNGG 1 cut(s) 580
BseGI GGATG 5 cut(s) 116, 529, 577, 685, 1053
BseJI GATNNNNATC 2 cut(s) 613, 681
BseLI CCNNNNNNNGG 7 cut(s) 217, 284, 624, 788, 877, 980, 1031
BseMI GCAATG 2 cut(s) 120, 842
BseMII CTCAG 2 cut(s) 1002, 1040
BseRI GAGGAG 3 cut(s) 768, 1011, 1014
BseSI GKGCMC 2 cut(s) 723, 910
BseXI GCAGC 2 cut(s) 814, 904
BsgI GTGCAG 3 cut(s) 681, 807, 911
Bsh1236I CGCG 1 cut(s) 1141
BshFI GGCC 3 cut(s) 277, 882, 1083
BshNI GGYRCC 1 cut(s) 808
BsiHKAI GWGCWC 2 cut(s) 723, 910
BslFI GGGAC 2 cut(s) 648, 1049
BslI CCNNNNNNNGG 7 cut(s) 217, 284, 624, 788, 877, 980, 1031
BsmAI GTCTC 3 cut(s) 71, 991, 1139
BsmFI GGGAC 2 cut(s) 648, 1049
BsnI GGCC 3 cut(s) 277, 882, 1083
Bsp1286I GDGCHC 3 cut(s) 290, 723, 910
BspACI CCGC 3 cut(s) 27, 274, 1139
BspANI GGCC 3 cut(s) 277, 882, 1083
BspCNI CTCAG 2 cut(s) 1001, 1039
BspFNI CGCG 1 cut(s) 1141
BspLI GGNNCC 4 cut(s) 810, 881, 1037, 1038
BspMI ACCTGC 1 cut(s) 779
BspPI GGATC 4 cut(s) 32, 656, 847, 862
BspT107I GGYRCC 1 cut(s) 808
BsrDI GCAATG 2 cut(s) 120, 842
BssECI CCNNGG 1 cut(s) 580
BssT1I CCWWGG 1 cut(s) 580
Bst2UI CCWGG 1 cut(s) 884
Bst4CI ACNGT 2 cut(s) 206, 1125
Bst6I CTCTTC 2 cut(s) 74, 624
BstAPI GCANNNNNTGC 1 cut(s) 122
BstBAI YACGTR 2 cut(s) 481, 701
BstC8I GCNNGC 4 cut(s) 212, 329, 333, 654
BstDEI CTNAG 3 cut(s) 126, 988, 1026
BstENI CCTNNNNNAGG 1 cut(s) 1029
BstF5I GGATG 5 cut(s) 116, 529, 577, 685, 1053
BstFNI CGCG 1 cut(s) 1141
BstMAI GTCTC 3 cut(s) 71, 991, 1139
BstMWI GCNNNNNNNGC 2 cut(s) 122, 526
BstNI CCWGG 1 cut(s) 884
BstNSI RCATGY 1 cut(s) 198
BstSCI CCNGG 1 cut(s) 882
BstSLI GKGCMC 2 cut(s) 723, 910
BstUI CGCG 1 cut(s) 1141
BstV1I GCAGC 2 cut(s) 814, 904
BstV2I GAAGAC 2 cut(s) 962, 1229
BstX2I RGATCY 2 cut(s) 37, 50
BstYI RGATCY 2 cut(s) 37, 50
BsuRI GGCC 3 cut(s) 277, 882, 1083
BtrI CACGTC 1 cut(s) 889
BtsCI GGATG 5 cut(s) 116, 529, 577, 685, 1053
BtsI GCAGTG 2 cut(s) 29, 754
BtsIMutI CAGTG 3 cut(s) 29, 754, 1121
BveI ACCTGC 1 cut(s) 779
Cac8I GCNNGC 4 cut(s) 212, 329, 333, 654
Cfr13I GGNCC 4 cut(s) 577, 880, 1036, 1082
Csp6I GTAC 1 cut(s) 847
CviAII CATG 6 cut(s) 195, 850, 872, 876, 1072, 1231
CviQI GTAC 1 cut(s) 847
DdeI CTNAG 3 cut(s) 126, 988, 1026
DraI TTTAAA 2 cut(s) 456, 742
DraIII CACNNNGTG 1 cut(s) 983
Eam1104I CTCTTC 2 cut(s) 74, 624
EarI CTCTTC 2 cut(s) 74, 624
Eco130I CCWWGG 1 cut(s) 580
Eco24I GRGCYC 1 cut(s) 290
Eco32I GATATC 1 cut(s) 611
Eco47I GGWCC 2 cut(s) 577, 1036
Eco72I CACGTG 2 cut(s) 481, 701
EcoNI CCTNNNNNAGG 1 cut(s) 1029
EcoO109I RGGNCCY 3 cut(s) 577, 880, 1036
EcoRII CCWGG 1 cut(s) 882
EcoRV GATATC 1 cut(s) 611
EcoT14I CCWWGG 1 cut(s) 580
EcoT22I ATGCAT 2 cut(s) 877, 1073
EcoT38I GRGCYC 1 cut(s) 290
ErhI CCWWGG 1 cut(s) 580
FaeI CATG 6 cut(s) 198, 853, 875, 879, 1075, 1234
FalI AAGNNNNNCTT 4 cut(s) 509, 541, 621, 653
FaqI GGGAC 2 cut(s) 648, 1049
FatI CATG 6 cut(s) 194, 849, 871, 875, 1071, 1230
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 1 cut(s) 369
Fnu4HI GCNGC 3 cut(s) 275, 828, 893
FokI GGATG 5 cut(s) 103, 516, 584, 672, 1040
FriOI GRGCYC 1 cut(s) 290
Fsp4HI GCNGC 3 cut(s) 275, 828, 893
FspBI CTAG 1 cut(s) 171
GluI GCNGC 3 cut(s) 275, 828, 893
GsuI CTGGAG 1 cut(s) 999
HaeIII GGCC 3 cut(s) 277, 882, 1083
Hin1II CATG 6 cut(s) 198, 853, 875, 879, 1075, 1234
HincII GTYRAC 1 cut(s) 943
HindII GTYRAC 1 cut(s) 943
HinfI GANTC 4 cut(s) 493, 944, 1113, 1190
HphI GGTGA 2 cut(s) 1015, 1193
Hpy166II GTNNAC 4 cut(s) 370, 721, 908, 943
Hpy188I TCNGA 7 cut(s) 262, 547, 676, 949, 991, 1029, 1112
Hpy188III TCNNGA 4 cut(s) 533, 626, 665, 856
Hpy8I GTNNAC 4 cut(s) 370, 721, 908, 943
Hpy99I CGWCG 1 cut(s) 262
HpyAV CCTTC 5 cut(s) 233, 327, 720, 747, 1095
HpyCH4III ACNGT 2 cut(s) 206, 1125
HpyCH4IV ACGT 4 cut(s) 257, 480, 700, 888
HpyF10VI GCNNNNNNNGC 2 cut(s) 122, 526
HpyF3I CTNAG 3 cut(s) 126, 988, 1026
HpySE526I ACGT 4 cut(s) 257, 480, 700, 888
Hsp92II CATG 6 cut(s) 198, 853, 875, 879, 1075, 1234
KflI GGGWCCC 1 cut(s) 1036
Ksp22I TGATCA 1 cut(s) 3
LmnI GCTCC 3 cut(s) 781, 1018, 1024
Lsp1109I GCAGC 2 cut(s) 814, 904
LweI GCATC 3 cut(s) 125, 538, 1174
MaeI CTAG 1 cut(s) 171
MaeII ACGT 4 cut(s) 257, 480, 700, 888
MaeIII GTNAC 2 cut(s) 758, 1003
MboII GAAGA 5 cut(s) 61, 641, 718, 962, 1234
MfeI CAATTG 1 cut(s) 336
MflI RGATCY 2 cut(s) 37, 50
MhlI GDGCHC 3 cut(s) 290, 723, 910
MluCI AATT 9 cut(s) 243, 336, 375, 457, 592, 690, 710, 1133, 1172
MlyI GAGTC 2 cut(s) 938, 1107
MmeI TCCRAC 2 cut(s) 240, 325
MnlI CCTC 7 cut(s) 34, 220, 568, 625, 789, 1032, 1035
Mph1103I ATGCAT 2 cut(s) 877, 1073
MseI TTAA 5 cut(s) 146, 381, 455, 713, 741
MslI CAYNNNNRTG 3 cut(s) 426, 479, 1123
MspA1I CMGCKG 1 cut(s) 1205
MspR9I CCNGG 1 cut(s) 884
MunI CAATTG 1 cut(s) 336
MvaI CCWGG 1 cut(s) 884
MvnI CGCG 1 cut(s) 1141
MwoI GCNNNNNNNGC 2 cut(s) 122, 526
NlaIII CATG 6 cut(s) 198, 853, 875, 879, 1075, 1234
NlaIV GGNNCC 4 cut(s) 810, 881, 1037, 1038
NmuCI GTSAC 2 cut(s) 758, 1003
NsiI ATGCAT 2 cut(s) 877, 1073
NspI RCATGY 1 cut(s) 198
PfeI GAWTC 2 cut(s) 493, 1190
PflMI CCANNNNNTGG 1 cut(s) 217
PkrI GCNGC 3 cut(s) 276, 829, 894
PleI GAGTC 2 cut(s) 938, 1107
PmaCI CACGTG 2 cut(s) 481, 701
PmlI CACGTG 2 cut(s) 481, 701
PpsI GAGTC 2 cut(s) 938, 1107
Ppu21I YACGTR 2 cut(s) 481, 701
PpuMI RGGWCCY 2 cut(s) 577, 1036
PsiI TTATAA 1 cut(s) 735
Psp5II RGGWCCY 2 cut(s) 577, 1036
Psp6I CCWGG 1 cut(s) 882
PspCI CACGTG 2 cut(s) 481, 701
PspGI CCWGG 1 cut(s) 882
PspN4I GGNNCC 4 cut(s) 810, 881, 1037, 1038
PspPI GGNCC 4 cut(s) 577, 880, 1036, 1082
PspPPI RGGWCCY 2 cut(s) 577, 1036
PsuI RGATCY 2 cut(s) 37, 50
PvuII CAGCTG 1 cut(s) 1205
RsaI GTAC 1 cut(s) 848
RsaNI GTAC 1 cut(s) 847
RseI CAYNNNNRTG 3 cut(s) 426, 479, 1123
SaqAI TTAA 5 cut(s) 146, 381, 455, 713, 741
SatI GCNGC 3 cut(s) 275, 828, 893
Sau96I GGNCC 4 cut(s) 577, 880, 1036, 1082
SchI GAGTC 2 cut(s) 938, 1107
ScrFI CCNGG 1 cut(s) 884
SduI GDGCHC 3 cut(s) 290, 723, 910
SfaNI GCATC 3 cut(s) 125, 538, 1174
SinI GGWCC 2 cut(s) 577, 1036
SmiI ATTTAAAT 1 cut(s) 456
SmiMI CAYNNNNRTG 3 cut(s) 426, 479, 1123
Sse9I AATT 9 cut(s) 243, 336, 375, 457, 592, 690, 710, 1133, 1172
SsiI CCGC 3 cut(s) 27, 274, 1139
SspMI CTAG 1 cut(s) 171
StyD4I CCNGG 1 cut(s) 882
StyI CCWWGG 1 cut(s) 580
SwaI ATTTAAAT 1 cut(s) 456
TaaI ACNGT 2 cut(s) 206, 1125
TaiI ACGT 4 cut(s) 260, 483, 703, 891
TaqI TCGA 1 cut(s) 919
TasI AATT 9 cut(s) 243, 336, 375, 457, 592, 690, 710, 1133, 1172
TauI GCSGC 1 cut(s) 277
TfiI GAWTC 2 cut(s) 493, 1190
Tru1I TTAA 5 cut(s) 146, 381, 455, 713, 741
Tru9I TTAA 5 cut(s) 146, 381, 455, 713, 741
TscAI CASTG 3 cut(s) 36, 754, 1128
TseFI GTSAC 2 cut(s) 758, 1003
TseI GCWGC 2 cut(s) 827, 892
Tsp45I GTSAC 2 cut(s) 758, 1003
TspDTI ATGAA 8 cut(s) 61, 72, 94, 318, 410, 506, 567, 950
TspGWI ACGGA 1 cut(s) 771
TspRI CASTG 3 cut(s) 36, 754, 1128
Van91I CCANNNNNTGG 1 cut(s) 217
VneI GTGCAC 2 cut(s) 719, 906
VpaK11BI GGWCC 2 cut(s) 577, 1036
XagI CCTNNNNNAGG 1 cut(s) 1029
XapI RAATTY 2 cut(s) 592, 1172
XceI RCATGY 1 cut(s) 198
XmiI GTMKAC 1 cut(s) 369
XspI CTAG 1 cut(s) 171
Zsp2I ATGCAT 2 cut(s) 877, 1073
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.