Rh7BG323600

Protein of unknown function (DUF707)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0004588
Physical Location & Seq
Forward (+)
31855559 .. 31862350
6792 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG323600.1

Sequence Viewer

Length: 1053 bp
ATGATCAATCCTGTGTCTGTACTGTCAGATCCGAAGAATAGATCATTCTACTGCAGTCTCTTCATTGTACTTTCATTGATTTCCGGTGCTTATTTCATTGGTAGTGCGTCCATTTCTCAGGAGTACAAGGAAAAATTAACTAGATGGAAAGTTATCTACAATATGCAGAATACAAATCTTGGTACTTGCAAGAAACGGTGCCAGCCGTCAGGGACTGAGGCATTACCGGAAGGAATTGTTGTCAAAACATCGGACTTGGAAATGCGGCCTTTATGGGGCTCCTCTATGAAAAATAAAAACTCAACGCCTTCAATGAGCTTGCTGGCTATTGCAGTTGGAATAAAACAGAAAGAAATAGTGGACAAAATTGTTAGGAAGTTTCTATCAAGTGATTTTGTGGTAATGCTTTTCCATTATGATGGTGCTGTGGATAAATGGAGGGACTTACCTTGGAGTGATACTGCCATACATGTATCTGTGATGAACCAAACAAAATGGTGGTTCGCAAAACGTTTCTTGCATCCAGATATAGTGACTGAATATAAATATATTTTTCTCTGGGATGAGGACCTCGGAGTTGAGAATTTTGATCCAGAACGATATCTATCAATTATTCGGGAAGAGGGACTTGAAATATCACAGCCAGCACTTGATCCTGTCAAATCGGAGGTGTATCATCCAATCACTGCACGTGCAAAGAAATCAAAAGTGCACAGAAGGTTTTATAAGTTCAAAGGCAGTGGAAGGTGCGATGATCAAAGCTCTGGTCCTCCATGTATAGGTTGGGTGGAAATGATGGCACCTGTATTCTCAAGTGCGGCTTGGCAATGTGTATGGTACATGATTCAGAATGACTTGATCCATGCATGGGGACTGGATGTGCAGCTTGGTTACTGTGCACAAGGGGATCGAATGAAAAATGTTGGTGTGGTTGACTCGGAATATATAGTTCATCTTGGTCTTCCTACACTTGGTGTCGCAGATGACAATAAGGGTATCAATGGCATGGCTCATTCTCACAAAGAGGGCTCAAAAGCATTGGTGAGTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF707

Protein Analysis

350

Amino Acids

39.67

Weight (kDa)

8.33

Isoelectric Point (pI)

34.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF707 PF05212 67 - 331 3.3e-140 Protein of unknown function (DUF707)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 726
AccB1I GGYRCC 2 cut(s) 198, 799
AciI CCGC 2 cut(s) 265, 818
AclI AACGTT 1 cut(s) 511
AclWI GGATC 5 cut(s) 23, 584, 647, 853, 915
AcsI RAATTY 1 cut(s) 583
AcvI CACGTG 1 cut(s) 692
AdeI CACNNNGTG 1 cut(s) 974
AfaI GTAC 5 cut(s) 21, 69, 125, 184, 839
AfiI CCNNNNNNNGG 4 cut(s) 275, 779, 868, 971
AflIII ACRYGT 1 cut(s) 469
AgsI TTSAA 3 cut(s) 312, 632, 733
AluBI AGCT 3 cut(s) 318, 762, 886
AluI AGCT 3 cut(s) 318, 762, 886
Alw21I GWGCWC 2 cut(s) 714, 901
Alw26I GTCTC 1 cut(s) 62
Alw44I GTGCAC 2 cut(s) 710, 897
AlwI GGATC 5 cut(s) 23, 584, 647, 853, 915
AlwNI CAGNNNCTG 1 cut(s) 215
AoxI GGCC 1 cut(s) 266
ApaLI GTGCAC 2 cut(s) 710, 897
ApeKI GCWGC 1 cut(s) 883
ApoI RAATTY 1 cut(s) 583
ArsI GACNNNNNNTTYG 2 cut(s) 751, 783
AspS9I GGNCC 2 cut(s) 568, 767
AvaII GGWCC 2 cut(s) 568, 767
BaeGI GKGCMC 2 cut(s) 714, 901
BanI GGYRCC 2 cut(s) 198, 799
BanII GRGCYC 2 cut(s) 281, 1031
BbrPI CACGTG 1 cut(s) 692
BbsI GAAGAC 1 cut(s) 953
Bbv12I GWGCWC 2 cut(s) 714, 901
BbvI GCAGC 1 cut(s) 895
BccI CCATC 3 cut(s) 138, 413, 790
BceAI ACGGC 1 cut(s) 190
BclI TGATCA 2 cut(s) 3, 754
BcoDI GTCTC 1 cut(s) 62
BfaI CTAG 1 cut(s) 141
BfmI CTRYAG 1 cut(s) 52
BisI GCNGC 3 cut(s) 266, 819, 884
BlsI GCNGC 3 cut(s) 267, 820, 885
Bme18I GGWCC 2 cut(s) 568, 767
BmgT120I GGNCC 2 cut(s) 568, 767
BmiI GGNNCC 3 cut(s) 200, 280, 801
BmsI GCATC 1 cut(s) 529
BpiI GAAGAC 1 cut(s) 953
BpuEI CTTGAG 1 cut(s) 796
BsaAI YACGTR 1 cut(s) 692
BsaBI GATNNNNATC 1 cut(s) 604
BsaJI CCNNGG 2 cut(s) 449, 571
BsaWI WCCGGW 2 cut(s) 83, 226
Bsc4I CCNNNNNNNGG 4 cut(s) 275, 779, 868, 971
Bse1I ACTGG 1 cut(s) 879
Bse3DI GCAATG 1 cut(s) 833
Bse8I GATNNNNATC 1 cut(s) 604
BseDI CCNNGG 2 cut(s) 449, 571
BseGI GGATG 4 cut(s) 520, 568, 676, 883
BseJI GATNNNNATC 1 cut(s) 604
BseLI CCNNNNNNNGG 4 cut(s) 275, 779, 868, 971
BseMI GCAATG 1 cut(s) 833
BseMII CTCAG 2 cut(s) 131, 207
BseNI ACTGG 1 cut(s) 879
BseRI GAGGAG 1 cut(s) 271
BseSI GKGCMC 2 cut(s) 714, 901
BseXI GCAGC 1 cut(s) 895
BsgI GTGCAG 2 cut(s) 672, 902
BshFI GGCC 1 cut(s) 268
BshNI GGYRCC 2 cut(s) 198, 799
BsiHKAI GWGCWC 2 cut(s) 714, 901
BsiSI CCGG 2 cut(s) 84, 227
BslFI GGGAC 4 cut(s) 226, 455, 639, 885
BslI CCNNNNNNNGG 4 cut(s) 275, 779, 868, 971
BsmAI GTCTC 1 cut(s) 62
BsmFI GGGAC 4 cut(s) 226, 455, 639, 885
BsnI GGCC 1 cut(s) 268
Bsp1286I GDGCHC 4 cut(s) 281, 714, 901, 1031
Bsp143I GATC 8 cut(s) 3, 28, 41, 589, 652, 754, 858, 907
BspACI CCGC 2 cut(s) 265, 818
BspANI GGCC 1 cut(s) 268
BspCNI CTCAG 2 cut(s) 130, 208
BspLI GGNNCC 3 cut(s) 200, 280, 801
BspMAI CTGCAG 1 cut(s) 56
BspPI GGATC 5 cut(s) 23, 584, 647, 853, 915
BspT107I GGYRCC 2 cut(s) 198, 799
BsrDI GCAATG 1 cut(s) 833
BsrI ACTGG 1 cut(s) 879
BssECI CCNNGG 2 cut(s) 449, 571
BssMI GATC 8 cut(s) 3, 28, 41, 589, 652, 754, 858, 907
BssT1I CCWWGG 1 cut(s) 449
Bst4CI ACNGT 3 cut(s) 24, 198, 896
Bst6I CTCTTC 2 cut(s) 65, 615
BstBAI YACGTR 1 cut(s) 692
BstC8I GCNNGC 4 cut(s) 203, 320, 324, 645
BstDEI CTNAG 2 cut(s) 117, 216
BstF5I GGATG 4 cut(s) 520, 568, 676, 883
BstKTI GATC 8 cut(s) 6, 31, 44, 592, 655, 757, 861, 910
BstMAI GTCTC 1 cut(s) 62
BstMBI GATC 8 cut(s) 3, 28, 41, 589, 652, 754, 858, 907
BstNSI RCATGY 1 cut(s) 473
BstSFI CTRYAG 1 cut(s) 52
BstSLI GKGCMC 2 cut(s) 714, 901
BstV1I GCAGC 1 cut(s) 895
BstV2I GAAGAC 1 cut(s) 953
BstX2I RGATCY 1 cut(s) 28
BstXI CCANNNNNNTGG 1 cut(s) 419
BstYI RGATCY 1 cut(s) 28
BsuRI GGCC 1 cut(s) 268
BtgZI GCGATG 1 cut(s) 765
BtsCI GGATG 4 cut(s) 520, 568, 676, 883
BtsI GCAGTG 2 cut(s) 684, 745
BtsIMutI CAGTG 2 cut(s) 684, 745
Cac8I GCNNGC 4 cut(s) 203, 320, 324, 645
CaiI CAGNNNCTG 1 cut(s) 215
Cfr13I GGNCC 2 cut(s) 568, 767
CseI GACGC 1 cut(s) 96
Csp6I GTAC 5 cut(s) 20, 68, 124, 183, 838
CspCI CAANNNNNGTGG 2 cut(s) 721, 756
CviAII CATG 6 cut(s) 470, 774, 841, 863, 867, 1006
CviQI GTAC 5 cut(s) 20, 68, 124, 183, 838
DdeI CTNAG 2 cut(s) 117, 216
DpnI GATC 8 cut(s) 5, 30, 43, 591, 654, 756, 860, 909
DpnII GATC 8 cut(s) 3, 28, 41, 589, 652, 754, 858, 907
DraIII CACNNNGTG 1 cut(s) 974
Eam1104I CTCTTC 2 cut(s) 65, 615
EarI CTCTTC 2 cut(s) 65, 615
Eco130I CCWWGG 1 cut(s) 449
Eco24I GRGCYC 2 cut(s) 281, 1031
Eco32I GATATC 1 cut(s) 602
Eco47I GGWCC 2 cut(s) 568, 767
Eco72I CACGTG 1 cut(s) 692
EcoO109I RGGNCCY 1 cut(s) 568
EcoRV GATATC 1 cut(s) 602
EcoT14I CCWWGG 1 cut(s) 449
EcoT22I ATGCAT 1 cut(s) 868
EcoT38I GRGCYC 2 cut(s) 281, 1031
ErhI CCWWGG 1 cut(s) 449
FaeI CATG 6 cut(s) 473, 777, 844, 866, 870, 1009
FalI AAGNNNNNCTT 4 cut(s) 612, 644, 805, 837
FaqI GGGAC 4 cut(s) 226, 455, 639, 885
FatI CATG 6 cut(s) 469, 773, 840, 862, 866, 1005
FbaI TGATCA 2 cut(s) 3, 754
Fnu4HI GCNGC 3 cut(s) 266, 819, 884
FokI GGATG 4 cut(s) 507, 575, 663, 890
FriOI GRGCYC 2 cut(s) 281, 1031
Fsp4HI GCNGC 3 cut(s) 266, 819, 884
FspBI CTAG 1 cut(s) 141
GluI GCNGC 3 cut(s) 266, 819, 884
HaeIII GGCC 1 cut(s) 268
HapII CCGG 2 cut(s) 84, 227
HgaI GACGC 1 cut(s) 96
Hin1II CATG 6 cut(s) 473, 777, 844, 866, 870, 1009
HincII GTYRAC 1 cut(s) 934
HindII GTYRAC 1 cut(s) 934
HinfI GANTC 2 cut(s) 844, 935
HpaII CCGG 2 cut(s) 84, 227
Hpy166II GTNNAC 4 cut(s) 361, 712, 899, 934
Hpy188I TCNGA 7 cut(s) 28, 33, 253, 575, 667, 849, 940
Hpy188III TCNNGA 4 cut(s) 119, 524, 593, 617
Hpy8I GTNNAC 4 cut(s) 361, 712, 899, 934
HpyAV CCTTC 4 cut(s) 224, 318, 711, 738
HpyCH4III ACNGT 3 cut(s) 24, 198, 896
HpyCH4IV ACGT 2 cut(s) 511, 691
HpyF3I CTNAG 2 cut(s) 117, 216
HpySE526I ACGT 2 cut(s) 511, 691
Hsp92II CATG 6 cut(s) 473, 777, 844, 866, 870, 1009
Ksp22I TGATCA 2 cut(s) 3, 754
Kzo9I GATC 8 cut(s) 3, 28, 41, 589, 652, 754, 858, 907
LmnI GCTCC 1 cut(s) 284
Lsp1109I GCAGC 1 cut(s) 895
LweI GCATC 1 cut(s) 529
MaeI CTAG 1 cut(s) 141
MaeII ACGT 2 cut(s) 511, 691
MaeIII GTNAC 2 cut(s) 532, 890
MalI GATC 8 cut(s) 5, 30, 43, 591, 654, 756, 860, 909
MboI GATC 8 cut(s) 3, 28, 41, 589, 652, 754, 858, 907
MboII GAAGA 4 cut(s) 46, 52, 632, 953
MflI RGATCY 1 cut(s) 28
MhlI GDGCHC 4 cut(s) 281, 714, 901, 1031
MluCI AATT 5 cut(s) 134, 234, 366, 583, 609
MlyI GAGTC 1 cut(s) 929
MmeI TCCRAC 1 cut(s) 316
MnlI CCTC 9 cut(s) 211, 292, 432, 559, 581, 616, 661, 780, 1018
Mph1103I ATGCAT 1 cut(s) 868
MseI TTAA 2 cut(s) 137, 1051
MslI CAYNNNNRTG 1 cut(s) 417
MspI CCGG 2 cut(s) 84, 227
NdeII GATC 8 cut(s) 3, 28, 41, 589, 652, 754, 858, 907
NlaIII CATG 6 cut(s) 473, 777, 844, 866, 870, 1009
NlaIV GGNNCC 3 cut(s) 200, 280, 801
NmuCI GTSAC 1 cut(s) 532
NsiI ATGCAT 1 cut(s) 868
NspI RCATGY 1 cut(s) 473
PciI ACATGT 1 cut(s) 469
PfeI GAWTC 1 cut(s) 844
PkrI GCNGC 3 cut(s) 267, 820, 885
PleI GAGTC 1 cut(s) 929
PmaCI CACGTG 1 cut(s) 692
PmlI CACGTG 1 cut(s) 692
PpsI GAGTC 1 cut(s) 929
Ppu21I YACGTR 1 cut(s) 692
PpuMI RGGWCCY 1 cut(s) 568
PscI ACATGT 1 cut(s) 469
PsiI TTATAA 1 cut(s) 726
Psp1406I AACGTT 1 cut(s) 511
Psp5II RGGWCCY 1 cut(s) 568
PspCI CACGTG 1 cut(s) 692
PspN4I GGNNCC 3 cut(s) 200, 280, 801
PspPI GGNCC 2 cut(s) 568, 767
PspPPI RGGWCCY 1 cut(s) 568
PstI CTGCAG 1 cut(s) 56
PstNI CAGNNNCTG 1 cut(s) 215
PsuI RGATCY 1 cut(s) 28
RsaI GTAC 5 cut(s) 21, 69, 125, 184, 839
RsaNI GTAC 5 cut(s) 20, 68, 124, 183, 838
RseI CAYNNNNRTG 1 cut(s) 417
SaqAI TTAA 2 cut(s) 137, 1051
SatI GCNGC 3 cut(s) 266, 819, 884
Sau3AI GATC 8 cut(s) 3, 28, 41, 589, 652, 754, 858, 907
Sau96I GGNCC 2 cut(s) 568, 767
SchI GAGTC 1 cut(s) 929
SduI GDGCHC 4 cut(s) 281, 714, 901, 1031
SfaNI GCATC 1 cut(s) 529
SfcI CTRYAG 1 cut(s) 52
SinI GGWCC 2 cut(s) 568, 767
SmiMI CAYNNNNRTG 1 cut(s) 417
SmlI CTYRAG 1 cut(s) 811
SmoI CTYRAG 1 cut(s) 811
Sse9I AATT 5 cut(s) 134, 234, 366, 583, 609
SsiI CCGC 2 cut(s) 265, 818
SspMI CTAG 1 cut(s) 141
StyI CCWWGG 1 cut(s) 449
TaaI ACNGT 3 cut(s) 24, 198, 896
TaiI ACGT 2 cut(s) 514, 694
TaqI TCGA 1 cut(s) 910
TasI AATT 5 cut(s) 134, 234, 366, 583, 609
TatI WGTACW 3 cut(s) 19, 67, 123
TauI GCSGC 2 cut(s) 268, 821
TfiI GAWTC 1 cut(s) 844
Tru1I TTAA 2 cut(s) 137, 1051
Tru9I TTAA 2 cut(s) 137, 1051
TscAI CASTG 2 cut(s) 691, 745
TseFI GTSAC 1 cut(s) 532
TseI GCWGC 1 cut(s) 883
Tsp45I GTSAC 1 cut(s) 532
TspDTI ATGAA 7 cut(s) 52, 63, 85, 302, 497, 929, 941
TspRI CASTG 2 cut(s) 691, 745
VneI GTGCAC 2 cut(s) 710, 897
VpaK11BI GGWCC 2 cut(s) 568, 767
XapI RAATTY 1 cut(s) 583
XceI RCATGY 1 cut(s) 473
XcmI CCANNNNNNNNNTGG 1 cut(s) 780
XspI CTAG 1 cut(s) 141
Zsp2I ATGCAT 1 cut(s) 868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.