Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0010491

Physical Location & Seq

Genomic Coordinates Reverse (-)

47478481 .. 47481075

Gene Structure 2595 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G584900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 738 bp

ATGAACGTTGTGAGCAAGGGAGGAGGAGGCGGCTTGGCGGCGTCTCGGATTGTAGTGATAACGGGAGTGAGCAAAGGGCTGGGGCGAGCGCTGGCGGTAGAGATGGCCAAGAGGGGCCACACCGTAATCGGCTGCTCCCGTGCCCAGGATAAGCTCAACGCCCTCCAATCCGAGCTCTCCTCCGACAAACACCTCTTCCTCAACACCGATGTCAGGTCGAATACCAGCATTGCTGAGCTGGCACGAGTTGTGAAGGAAAAAAGGGGCATTCCAGATATAATAGTGAACAATGCGGGCATCATCAACGACAACAAGAAGCTTTGGGAGGTGCCGGTAGAAGAGTTTGACAGCGTCATTGACACCAATGTCAAGGGAATCGCTAACGTGTTGCGCCACTTCATTCCGCTGATGCTGTCGCGGAATGAGGGGAAGAACCCAGCGGGAATCATAGTCAACATGTCTTCAGGATGGGGCCGATCGGGTGCGGCACATGTGGCCCCTTACTGTGCATCCAAATGGGCCGTGGAGGGCTTGACCCGATCAGTTGCTAGGGAGTTGCCTAGTGAAATGGCAATTCTTGCACTCAACCCCGGTGTCATACACACCGACATGCTTGAGTCGTGTTTTGGAGACTCCAGCATGAAAAATTACCCGAAACCTGATGCATGGGCCGTCAAGGCTGCTACCATGATCTTGAATCTCACACCAGCCGACAATGGAGCTTCTCTCACTGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004312 GO:0004316 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006082 GO:0006575 GO:0006629 GO:0006631 GO:0006633 GO:0006725 GO:0006732 GO:0006760 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0009058 GO:0009987 GO:0016053 GO:0016491 GO:0016614 GO:0016616 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0030497 GO:0032787 GO:0034641 GO:0036094 GO:0042558 GO:0043436 GO:0043603 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0046394 GO:0046483 GO:0048037 GO:0050661 GO:0050662 GO:0051186 GO:0055114 GO:0071704 GO:0072330 GO:0097159 GO:1901265 GO:1901360 GO:1901363 GO:1901564 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

adh_short

Protein Analysis

246

Amino Acids

26.02

Weight (kDa)

8.99

Isoelectric Point (pI)

36.54

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010491)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10310
fragaria_vesca	FvH4_5g27970
malus_domestica	MD08G1247500.v1.1
prunus_persica	Prupe.1G584900_v2.0.a1
pyrus_communis	pycom08g21440
rosa_chinensis	RchiOBHm_Chr7g0220131 RchiOBHm_Chr7g0220301
rosa_laevigata	RLG00000002254
rosa_multiflora	Rmu_sc0001136.1_g000033 Rmu_sc0001565.1_g000004 Rmu_sc0006361.1_g000021 Rmu_sc0023628.1_g000001
rosa_roxburghii	Rroxscaffold_3G00239760
rosa_rugosa	Rorug07G0189800 Rorug07G0192100
rosa_samantha	Rh5DG142100 Rh7AG332700 Rh7BG323000 Rh7CG350200 Rh7DG328800
rosa_wichuraiana	Rw7G028050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	365
AccB1I	GGYRCC	1 cut(s)	328
AccII	CGCG	1 cut(s)	418
AciI	CCGC	8 cut(s)	30, 38, 95, 293, 404, 418, 440, 485
AclI	AACGTT	1 cut(s)	6
AcoI	YGGCCR	1 cut(s)	105
AcuI	CTGAAG	1 cut(s)	447
AcyI	GRCGYC	1 cut(s)	41
AdeI	CACNNNGTG	1 cut(s)	735
AfeI	AGCGCT	1 cut(s)	90
AfiI	CCNNNNNNNGG	2 cut(s)	145, 213
AflIII	ACRYGT	3 cut(s)	384, 456, 490
AgsI	TTSAA	1 cut(s)	697
AjnI	CCWGG	1 cut(s)	144
AluBI	AGCT	5 cut(s)	154, 175, 238, 319, 722
AluI	AGCT	5 cut(s)	154, 175, 238, 319, 722
Alw21I	GWGCWC	1 cut(s)	177
Alw26I	GTCTC	2 cut(s)	48, 624
Aor51HI	AGCGCT	1 cut(s)	90
AoxI	GGCC	6 cut(s)	105, 115, 472, 495, 519, 669
ApeKI	GCWGC	2 cut(s)	132, 680
AspLEI	GCGC	2 cut(s)	91, 393
AspS9I	GGNCC	5 cut(s)	115, 472, 496, 519, 669
AsuC2I	CCSGG	1 cut(s)	591
BaeGI	GKGCMC	1 cut(s)	145
BalI	TGGCCA	1 cut(s)	107
BanI	GGYRCC	1 cut(s)	328
BanII	GRGCYC	1 cut(s)	177
BauI	CACGAG	1 cut(s)	243
BbsI	GAAGAC	1 cut(s)	453
Bbv12I	GWGCWC	1 cut(s)	177
BbvI	GCAGC	2 cut(s)	119, 667
BccI	CCATC	2 cut(s)	97, 462
BceAI	ACGGC	2 cut(s)	506, 656
BciT130I	CCWGG	1 cut(s)	146
BcnI	CCSGG	1 cut(s)	591
BcoDI	GTCTC	2 cut(s)	48, 624
BfaI	CTAG	2 cut(s)	549, 561
BfoI	RGCGCY	1 cut(s)	92
BglI	GCCNNNNNGGC	1 cut(s)	677
BisI	GCNGC	5 cut(s)	31, 39, 133, 486, 681
BlpI	GCTNAGC	1 cut(s)	234
BlsI	GCNGC	5 cut(s)	32, 40, 134, 487, 682
Bme1390I	CCNGG	2 cut(s)	146, 591
BmgT120I	GGNCC	5 cut(s)	115, 472, 496, 519, 669
BmiI	GGNNCC	4 cut(s)	116, 330, 473, 498
BmrFI	CCNGG	2 cut(s)	146, 591
BmsI	GCATC	4 cut(s)	306, 399, 518, 652
BpiI	GAAGAC	1 cut(s)	453
BplI	GAGNNNNNCTC	3 cut(s)	164, 196, 711
BpmI	CTGGAG	1 cut(s)	619
Bpu1102I	GCTNAGC	1 cut(s)	234
BpuEI	CTTGAG	1 cut(s)	635
BpuMI	CCSGG	1 cut(s)	591
BsaHI	GRCGYC	1 cut(s)	41
BsaJI	CCNNGG	3 cut(s)	144, 522, 589
Bsc4I	CCNNNNNNNGG	2 cut(s)	145, 213
Bse118I	RCCGGY	1 cut(s)	331
Bse3DI	GCAATG	1 cut(s)	228
BseBI	CCWGG	1 cut(s)	146
BseDI	CCNNGG	3 cut(s)	144, 522, 589
BseGI	GGATG	2 cut(s)	473, 509
BseLI	CCNNNNNNNGG	2 cut(s)	145, 213
BseMI	GCAATG	1 cut(s)	228
BseMII	CTCAG	1 cut(s)	225
BseRI	GAGGAG	3 cut(s)	36, 39, 169
BseSI	GKGCMC	1 cut(s)	145
BseXI	GCAGC	2 cut(s)	119, 667
BseYI	CCCAGC	2 cut(s)	79, 436
Bsh1236I	CGCG	1 cut(s)	418
Bsh1285I	CGRYCG	1 cut(s)	479
BshFI	GGCC	6 cut(s)	107, 117, 474, 497, 521, 671
BshNI	GGYRCC	1 cut(s)	328
BsiEI	CGRYCG	1 cut(s)	479
BsiHKAI	GWGCWC	1 cut(s)	177
BsiSI	CCGG	2 cut(s)	332, 591
BslI	CCNNNNNNNGG	2 cut(s)	145, 213
BsmAI	GTCTC	2 cut(s)	48, 624
BsmBI	CGTCTC	1 cut(s)	48
BsmI	GAATGC	1 cut(s)	267
BsnI	GGCC	6 cut(s)	107, 117, 474, 497, 521, 671
Bsp1286I	GDGCHC	2 cut(s)	145, 177
Bsp143I	GATC	3 cut(s)	476, 539, 690
Bsp1720I	GCTNAGC	1 cut(s)	234
BspACI	CCGC	8 cut(s)	30, 38, 95, 293, 404, 418, 440, 485
BspANI	GGCC	6 cut(s)	107, 117, 474, 497, 521, 671
BspCNI	CTCAG	1 cut(s)	226
BspFNI	CGCG	1 cut(s)	418
BspLI	GGNNCC	4 cut(s)	116, 330, 473, 498
BspT107I	GGYRCC	1 cut(s)	328
BsrDI	GCAATG	1 cut(s)	228
BsrFI	RCCGGY	1 cut(s)	331
BssAI	RCCGGY	1 cut(s)	331
BssECI	CCNNGG	3 cut(s)	144, 522, 589
BssMI	GATC	3 cut(s)	476, 539, 690
BssNI	GRCGYC	1 cut(s)	41
BssSI	CACGAG	1 cut(s)	243
Bst2BI	CACGAG	1 cut(s)	243
Bst2UI	CCWGG	1 cut(s)	146
Bst4CI	ACNGT	3 cut(s)	124, 506, 733
Bst6I	CTCTTC	2 cut(s)	200, 333
BstACI	GRCGYC	1 cut(s)	41
BstAPI	GCANNNNNTGC	1 cut(s)	578
BstC8I	GCNNGC	4 cut(s)	87, 93, 240, 295
BstDEI	CTNAG	1 cut(s)	234
BstDSI	CCRYGG	1 cut(s)	522
BstF5I	GGATG	2 cut(s)	473, 509
BstFNI	CGCG	1 cut(s)	418
BstH2I	RGCGCY	1 cut(s)	92
BstHHI	GCGC	2 cut(s)	91, 393
BstKTI	GATC	3 cut(s)	479, 542, 693
BstMAI	GTCTC	2 cut(s)	48, 624
BstMBI	GATC	3 cut(s)	476, 539, 690
BstMCI	CGRYCG	1 cut(s)	479
BstMWI	GCNNNNNNNGC	4 cut(s)	239, 494, 578, 677
BstNI	CCWGG	1 cut(s)	146
BstNSI	RCATGY	3 cut(s)	460, 494, 613
BstSCI	CCNGG	2 cut(s)	144, 589
BstSLI	GKGCMC	1 cut(s)	145
BstUI	CGCG	1 cut(s)	418
BstV1I	GCAGC	2 cut(s)	119, 667
BstV2I	GAAGAC	1 cut(s)	453
BsuRI	GGCC	6 cut(s)	107, 117, 474, 497, 521, 671
BtgI	CCRYGG	1 cut(s)	522
BtsCI	GGATG	2 cut(s)	473, 509
BtsIMutI	CAGTG	1 cut(s)	729
Cac8I	GCNNGC	4 cut(s)	87, 93, 240, 295
CfoI	GCGC	2 cut(s)	91, 393
Cfr10I	RCCGGY	1 cut(s)	331
Cfr13I	GGNCC	5 cut(s)	115, 472, 496, 519, 669
CseI	GACGC	2 cut(s)	30, 340
CviAII	CATG	6 cut(s)	457, 491, 610, 640, 666, 688
DdeI	CTNAG	1 cut(s)	234
DpnI	GATC	3 cut(s)	478, 541, 692
DpnII	GATC	3 cut(s)	476, 539, 690
DraIII	CACNNNGTG	1 cut(s)	735
DrdI	GACNNNNNNGTC	1 cut(s)	365
DseDI	GACNNNNNNGTC	1 cut(s)	365
EaeI	YGGCCR	1 cut(s)	105
Eam1104I	CTCTTC	2 cut(s)	200, 333
EarI	CTCTTC	2 cut(s)	200, 333
Ecl136II	GAGCTC	1 cut(s)	175
Eco24I	GRGCYC	1 cut(s)	177
Eco47III	AGCGCT	1 cut(s)	90
Eco53kI	GAGCTC	1 cut(s)	175
Eco57I	CTGAAG	1 cut(s)	447
EcoICRI	GAGCTC	1 cut(s)	175
EcoRII	CCWGG	1 cut(s)	144
EcoT22I	ATGCAT	1 cut(s)	667
EcoT38I	GRGCYC	1 cut(s)	177
Esp3I	CGTCTC	1 cut(s)	48
FaeI	CATG	6 cut(s)	460, 494, 613, 643, 669, 691
FaiI	YATR	9 cut(s)	278, 449, 458, 492, 599, 611, 641, 667, 689
FatI	CATG	6 cut(s)	456, 490, 609, 639, 665, 687
FauI	CCCGC	2 cut(s)	286, 433
Fnu4HI	GCNGC	5 cut(s)	31, 39, 133, 486, 681
FokI	GGATG	2 cut(s)	480, 496
FriOI	GRGCYC	1 cut(s)	177
Fsp4HI	GCNGC	5 cut(s)	31, 39, 133, 486, 681
FspBI	CTAG	2 cut(s)	549, 561
GlaI	GCGC	2 cut(s)	90, 392
GluI	GCNGC	5 cut(s)	31, 39, 133, 486, 681
GsaI	CCCAGC	2 cut(s)	83, 440
GsuI	CTGGAG	1 cut(s)	619
HaeII	RGCGCY	1 cut(s)	92
HaeIII	GGCC	6 cut(s)	107, 117, 474, 497, 521, 671
HapII	CCGG	2 cut(s)	332, 591
HgaI	GACGC	2 cut(s)	30, 340
HhaI	GCGC	2 cut(s)	91, 393
Hin1I	GRCGYC	1 cut(s)	41
Hin1II	CATG	6 cut(s)	460, 494, 613, 643, 669, 691
Hin6I	GCGC	2 cut(s)	89, 391
HinP1I	GCGC	2 cut(s)	89, 391
HincII	GTYRAC	1 cut(s)	454
HindII	GTYRAC	1 cut(s)	454
HindIII	AAGCTT	1 cut(s)	317
HinfI	GANTC	5 cut(s)	375, 444, 617, 632, 697
HpaII	CCGG	2 cut(s)	332, 591
Hpy166II	GTNNAC	2 cut(s)	286, 454
Hpy188I	TCNGA	3 cut(s)	48, 172, 184
Hpy188III	TCNNGA	3 cut(s)	272, 465, 694
Hpy8I	GTNNAC	2 cut(s)	286, 454
HpyAV	CCTTC	1 cut(s)	247
HpyCH4III	ACNGT	3 cut(s)	124, 506, 733
HpyCH4IV	ACGT	2 cut(s)	6, 384
HpyCH4V	TGCA	3 cut(s)	509, 581, 665
HpyF10VI	GCNNNNNNNGC	4 cut(s)	239, 494, 578, 677
HpyF3I	CTNAG	1 cut(s)	234
HpySE526I	ACGT	2 cut(s)	6, 384
Hsp92I	GRCGYC	1 cut(s)	41
Hsp92II	CATG	6 cut(s)	460, 494, 613, 643, 669, 691
HspAI	GCGC	2 cut(s)	89, 391
Kzo9I	GATC	3 cut(s)	476, 539, 690
LmnI	GCTCC	2 cut(s)	140, 719
Lsp1109I	GCAGC	2 cut(s)	119, 667
LweI	GCATC	4 cut(s)	306, 399, 518, 652
MaeI	CTAG	2 cut(s)	549, 561
MaeII	ACGT	2 cut(s)	6, 384
MalI	GATC	3 cut(s)	478, 541, 692
MboI	GATC	3 cut(s)	476, 539, 690
MboII	GAAGA	4 cut(s)	187, 350, 442, 453
MhlI	GDGCHC	2 cut(s)	145, 177
MlsI	TGGCCA	1 cut(s)	107
MluCI	AATT	2 cut(s)	573, 646
MluNI	TGGCCA	1 cut(s)	107
MlyI	GAGTC	2 cut(s)	626, 626
MmeI	TCCRAC	1 cut(s)	207
Mox20I	TGGCCA	1 cut(s)	107
Mph1103I	ATGCAT	1 cut(s)	667
MscI	TGGCCA	1 cut(s)	107
MslI	CAYNNNNRTG	2 cut(s)	514, 608
Msp20I	TGGCCA	1 cut(s)	107
MspA1I	CMGCKG	2 cut(s)	406, 440
MspI	CCGG	2 cut(s)	332, 591
MspR9I	CCNGG	2 cut(s)	146, 591
Mva1269I	GAATGC	1 cut(s)	267
MvaI	CCWGG	1 cut(s)	146
MvnI	CGCG	1 cut(s)	418
MwoI	GCNNNNNNNGC	4 cut(s)	239, 494, 578, 677
NciI	CCSGG	1 cut(s)	591
NdeII	GATC	3 cut(s)	476, 539, 690
NlaIII	CATG	6 cut(s)	460, 494, 613, 643, 669, 691
NlaIV	GGNNCC	4 cut(s)	116, 330, 473, 498
NsiI	ATGCAT	1 cut(s)	667
NspI	RCATGY	3 cut(s)	460, 494, 613
PciI	ACATGT	2 cut(s)	456, 490
PctI	GAATGC	1 cut(s)	267
PfeI	GAWTC	3 cut(s)	375, 444, 697
PflFI	GACNNNGTC	1 cut(s)	350
PkrI	GCNGC	5 cut(s)	32, 40, 134, 487, 682
Ple19I	CGATCG	1 cut(s)	479
PleI	GAGTC	2 cut(s)	625, 626
PpsI	GAGTC	2 cut(s)	625, 626
PscI	ACATGT	2 cut(s)	456, 490
Psp124BI	GAGCTC	1 cut(s)	177
Psp1406I	AACGTT	1 cut(s)	6
Psp6I	CCWGG	1 cut(s)	144
PspFI	CCCAGC	2 cut(s)	79, 436
PspGI	CCWGG	1 cut(s)	144
PspN4I	GGNNCC	4 cut(s)	116, 330, 473, 498
PspPI	GGNCC	5 cut(s)	115, 472, 496, 519, 669
PsyI	GACNNNGTC	1 cut(s)	350
PvuI	CGATCG	1 cut(s)	479
RseI	CAYNNNNRTG	2 cut(s)	514, 608
SacI	GAGCTC	1 cut(s)	177
SatI	GCNGC	5 cut(s)	31, 39, 133, 486, 681
Sau3AI	GATC	3 cut(s)	476, 539, 690
Sau96I	GGNCC	5 cut(s)	115, 472, 496, 519, 669
SchI	GAGTC	2 cut(s)	626, 626
ScrFI	CCNGG	2 cut(s)	146, 591
SduI	GDGCHC	2 cut(s)	145, 177
SfaNI	GCATC	4 cut(s)	306, 399, 518, 652
SmiMI	CAYNNNNRTG	2 cut(s)	514, 608
SmlI	CTYRAG	1 cut(s)	614
SmoI	CTYRAG	1 cut(s)	614
Sse9I	AATT	2 cut(s)	573, 646
SsiI	CCGC	8 cut(s)	30, 38, 95, 293, 404, 418, 440, 485
SspMI	CTAG	2 cut(s)	549, 561
SstI	GAGCTC	1 cut(s)	177
StyD4I	CCNGG	2 cut(s)	144, 589
TaaI	ACNGT	3 cut(s)	124, 506, 733
TaiI	ACGT	2 cut(s)	9, 387
TaqI	TCGA	1 cut(s)	218
TasI	AATT	2 cut(s)	573, 646
TauI	GCSGC	3 cut(s)	33, 41, 488
TfiI	GAWTC	3 cut(s)	375, 444, 697
TscAI	CASTG	1 cut(s)	736
TseI	GCWGC	2 cut(s)	132, 680
TspDTI	ATGAA	3 cut(s)	17, 388, 656
TspRI	CASTG	1 cut(s)	736
Tth111I	GACNNNGTC	1 cut(s)	350
XceI	RCATGY	3 cut(s)	460, 494, 613
XcmI	CCANNNNNNNNNTGG	1 cut(s)	520
XspI	CTAG	2 cut(s)	549, 561
Zsp2I	ATGCAT	1 cut(s)	667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.