Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0009339

Physical Location & Seq

Genomic Coordinates Forward (+)

777291 .. 785682

Gene Structure 8392 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G008800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

ATGACTTCCTACACGGCTCAAATCAACGTCCTGGGCACTGCGCATGGTTCTTCATTCAAGAGCCCCAATTTCACAACCCCAAGGGCTTTGTTTTTAGGTCAGAGACTGGGCCAAACGTCGCCGTCAAATGGCTTTATGTTTATGACCCCGACATCCAATTTCGTTAGAAGAGTCGGACCGCTTCGCATAGTCAACAAGAAAGTTGAAGATATCGATTTAGGAACGACGAACTCGGTCGTTGGGGCTTTTGAGAAATTGAAGGATGCAGAGAAACAAAGGATAAATGAGTTAGAAGAATTTGATAACAAGGCGAATATGCAGTTAGAGAGACAGCTTGTCATGGCTTCAAATTGGAGCAGGGCCTTGTTGATTATGCGTGGGAAGTTAAGGGGATCAGAATGGGATCCTGAGAACTCACACAGGATTGACTTCAGTGACTTTTGGAGACTGCTGAACTCAAATAACGTCCAGTTTATGGAGTACTCAAACTATGGCCAAACAATATCAGTGATTTTACCTTACTACAAAGATGAGAAAATGGAAGGAGCAAAAGGAAATTCAAAAAAGGAGGTTATTTTTCGGCGTCATGTTGTTGACCGGATGCCAATAGACAGTTGGAATGATGTTTGGCAGAAGTTGCATCAGCAAATAGTAAATGTTGAGGTTCTGAATGTAGATACAGTACCTGCTGAAATATATTCTACCGTTGCAACTGCAGTCATATGGTCTATGCGGCTTGCGTTGTCTATTGTATTGTATCTCTGGATTGACAACATGATGCGGCCAATTTATGCAAAGTTAATACCTTGTGATTTAGGAACTCCTAGTAAAAAAACCAGGCAGCCACTCAAGCGTCGTGCACTTGGATCATTAGGCAAAAGCCGGGCAAAATTTATATCAGCAGAAGAATCTACCGGCATTACCTTTGATGATTTTGCTGGCCAGGAATATATAAAGCGGGAACTGCAGGAGATCGTTAGAATTTTAAAGAATGATGAAGAGTTTCAAGACAAAGGCATCTATTGCCCAAAAGGTGTACTTCTTCATGGACCTCCAGGAACTGGCAAAACACTTCTGGCTAAAGCTATTGCCGGCGAAGCAGGACTGCCTTTCTTTGCAGCAAATGGCACTGATTTTGTAGAGATGTTTGTAGGTGTTGCAGCATCTCGTGTCAAGGATTTATTTGCTAGTGCCAGAAAATTCTCACCATCCATTATATTTATTGATGAGATAGATGCCATTGGTAGCAAACGTGGTGGACCTGATATTGGTGGGGGTGGTGCAGAAAGGGAACAAGGCCTGCTTCAGATACTAACAGAGATGGATGGATTTAAAGAGTTTACCTCACAGGTGCTAGTTATAGGTGCAACAAATAGATTAGATATCCTTGATCCTGCTCTATTGAGAAAGGGCCGCTTTGACAAGATTATAAGAGTTGGTTTGCCATCAAAGGATGGTAGACTGGCCATCTTGAAGGTGCATGCTAGAAATAAATTTTTTCGTTCTGAAGAGGAGAAGGAGGTTCTCCTTCAGGAAATTGCAGAGCTTACGGAGGATTTCACGGGTGCAGAGTTGCAGAACATACTGAATGAAGCTGGAATTTTGACTGCCAGGAAGGACTTAGATTTCATCGGACGTGAGGAGCTTCTGGAGGCTTTGAAAAGGCAACAGGGCACGTTTGAAACAGGTCAGGAAGATAGTACTGAAATTCCAGAGGAACTAAAACTGAGATTGGCATATCGAGAAGCAGCTGTTGCTGTCCTTGCCTGCTACTTTCCTGATCCATACCACCCTTTCACTGAGACAGATATAAAATCCATCCGTAGTCAGCCAAATATGCGCTACACTGAAATATCGGGGAAGGTCTTCTCAAGAAAATCGGATTTTGTACACTCTATAGTGCGTGCATGTGCTCCTAGAGTTATTGAGGAGGAGATGTTTGGAGTTGACAACTTGTGTTGGATCTCTGCAAAGGCCACATTAGAAGCTTCGAGGCTTGCAGAATTTCTTATTCTGCAGACAGGAATGACAGCATATGGGAAAGCATACTACAGGAATCAAAGTGATCTTGTGCCAAATCTTGCAGCCAAGCTTGAAGCACTTCGAGATGAATATATGCGTTATGCTGAGGAAAAATGTTCATCTGTACTAAGGGAGTACCATTCAGCTGTAGAGACAATTACAGATATTTTACTTGAAAAGGGAGAGATTAAAGCTGAAGAAATTTGGGACATATATAAAAGGTCTCCTCGGATACCTCAGCCTGCAGTGAGGCCGGTTGATGAATATGGAGCCCTAATTTATGCTGGGCGATGGGGAATCCATGGGGTCACACTCCCCGGGAGAGTTACATTTTCGCCTGGAAATGCTGGATTTTCAACCTTTGGTGCGCCTCGCCCTATGGAGACCCAACGAGTCAATGATAAAACTTGGAAGCTGATAGATAACATATGGGATGAAAGGGTTCAAGAAATTAAAGCTGAAGCTTCAGCAGAGGTTGAAGAAGACAAAGAGGTCCCACAACTTTTAATGGCCAGCCATTTCTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0010154 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0022414 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032501 GO:0032502 GO:0034357 GO:0042623 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0055035 GO:0061458 GO:0070011 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA

Protein Analysis

850

Amino Acids

95.83

Weight (kDa)

5.98

Isoelectric Point (pI)

41.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009339)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G64580
fragaria_vesca	FvH4_1g24180 FvH4_1g24180 FvH4_1g24180 FvH4_1g24180 FvH4_1g24180
malus_domestica	MD02G1315900.v1.1 MD07G1006000.v1.1
prunus_persica	Prupe.1G190200_v2.0.a1 Prupe.2G008800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0120571
rosa_laevigata	RLG00000018562
rosa_multiflora	Rmu_co8081184.1_g000001 Rmu_sc0001844.1_g000028 Rmu_sc0007380.1_g000017
rosa_roxburghii	Rroxscaffold_2G00123290
rosa_rugosa	Rorug02G0229500
rosa_samantha	Rh2AG285600 Rh2BG297200 Rh2CG274800 Rh2DG310900
rosa_wichuraiana	Rw2G022920

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1430
AasI	GACNNNNNNGTC	1 cut(s)	2513
Acc16I	TGCGCA	1 cut(s)	42
Acc36I	ACCTGC	1 cut(s)	694
AccB7I	CCANNNNNTGG	2 cut(s)	475, 1061
AccI	GTMKAC	1 cut(s)	1459
AciI	CCGC	5 cut(s)	179, 733, 781, 958, 1414
AclWI	GGATC	7 cut(s)	398, 400, 411, 874, 1385, 1775, 1970
AcoI	YGGCCR	5 cut(s)	493, 782, 940, 1464, 2532
AcuI	CTGAAG	7 cut(s)	415, 1289, 1514, 1527, 2238, 2472, 2502
AcyI	GRCGYC	1 cut(s)	583
AfaI	GTAC	7 cut(s)	482, 684, 1038, 1702, 1890, 2148, 2159
AfiI	CCNNNNNNNGG	4 cut(s)	128, 475, 1061, 1268
AhdI	GACNNNNNGTC	1 cut(s)	335
AjiI	CACGTC	1 cut(s)	1637
AjnI	CCWGG	6 cut(s)	30, 836, 942, 1054, 1610, 2359
Alw21I	GWGCWC	2 cut(s)	862, 1915
Alw26I	GTCTC	7 cut(s)	97, 322, 439, 1796, 2168, 2250, 2399
Alw44I	GTGCAC	1 cut(s)	858
AlwI	GGATC	7 cut(s)	398, 400, 411, 874, 1385, 1775, 1970
AlwNI	CAGNNNCTG	3 cut(s)	106, 686, 1061
Ama87I	CYCGRG	1 cut(s)	2339
ApaLI	GTGCAC	1 cut(s)	858
ApeKI	GCWGC	5 cut(s)	841, 1118, 1160, 1748, 2084
Asp700I	GAANNNNTTC	4 cut(s)	1002, 1865, 2100, 2463
AspLEI	GCGC	3 cut(s)	43, 1842, 2392
AspS9I	GGNCC	7 cut(s)	109, 176, 360, 1049, 1259, 1411, 2515
AsuC2I	CCSGG	3 cut(s)	884, 2340, 2341
AsuHPI	GGTGA	1 cut(s)	1197
AvaI	CYCGRG	1 cut(s)	2339
AvaII	GGWCC	4 cut(s)	176, 1049, 1259, 2515
BaeGI	GKGCMC	3 cut(s)	38, 862, 1676
BalI	TGGCCA	4 cut(s)	495, 942, 1466, 2534
BamHI	GGATCC	1 cut(s)	403
BanII	GRGCYC	2 cut(s)	65, 2296
BauI	CACGAG	1 cut(s)	1167
BbsI	GAAGAC	2 cut(s)	1858, 2511
Bbv12I	GWGCWC	2 cut(s)	862, 1915
BbvCI	CCTCAGC	2 cut(s)	2127, 2259
BbvI	GCAGC	5 cut(s)	853, 1130, 1172, 1760, 2096
BccI	CCATC	8 cut(s)	1216, 1315, 1319, 1448, 1453, 1475, 1826, 2307
BceAI	ACGGC	2 cut(s)	30, 106
BciT130I	CCWGG	6 cut(s)	32, 838, 944, 1056, 1612, 2361
BciVI	GTATCC	1 cut(s)	2247
BcnI	CCSGG	3 cut(s)	884, 2340, 2341
BcoDI	GTCTC	7 cut(s)	97, 322, 439, 1796, 2168, 2250, 2399
BfaI	CTAG	5 cut(s)	825, 1188, 1355, 1485, 1917
BfmI	CTRYAG	7 cut(s)	714, 965, 1896, 2015, 2050, 2169, 2265
BfuAI	ACCTGC	1 cut(s)	694
BfuI	GTATCC	1 cut(s)	2247
BisI	GCNGC	8 cut(s)	734, 782, 842, 1119, 1161, 1414, 1749, 2085
BlsI	GCNGC	8 cut(s)	735, 783, 843, 1120, 1162, 1415, 1750, 2086
BmcAI	AGTACT	2 cut(s)	482, 1702
Bme1390I	CCNGG	9 cut(s)	32, 838, 884, 944, 1056, 1612, 2340, 2341, 2361
Bme18I	GGWCC	4 cut(s)	176, 1049, 1259, 2515
BmeRI	GACNNNNNGTC	1 cut(s)	335
BmeT110I	CYCGRG	1 cut(s)	2339
BmgBI	CACGTC	1 cut(s)	1637
BmgT120I	GGNCC	7 cut(s)	109, 176, 360, 1049, 1259, 1411, 2515
BmiI	GGNNCC	3 cut(s)	405, 2293, 2517
BmrFI	CCNGG	9 cut(s)	32, 838, 884, 944, 1056, 1612, 2340, 2341, 2361
BmrI	ACTGGG	1 cut(s)	116
BmsI	GCATC	7 cut(s)	253, 591, 649, 768, 1026, 1172, 1225
BmuI	ACTGGG	1 cut(s)	116
BpiI	GAAGAC	2 cut(s)	1858, 2511
BplI	GAGNNNNNCTC	2 cut(s)	1328, 1360
BpmI	CTGGAG	2 cut(s)	1038, 1670
Bpu10I	CCTNAGC	2 cut(s)	2127, 2259
BpuEI	CTTGAG	2 cut(s)	833, 1855
BpuMI	CCSGG	3 cut(s)	884, 2340, 2341
Bsa29I	ATCGAT	1 cut(s)	213
BsaHI	GRCGYC	1 cut(s)	583
BsaI	GGTCTC	2 cut(s)	2250, 2399
BsaJI	CCNNGG	6 cut(s)	31, 80, 2249, 2323, 2338, 2339
BsaWI	WCCGGW	1 cut(s)	597
BsaXI	ACNNNNNCTCC	2 cut(s)	1922, 1952
Bsc4I	CCNNNNNNNGG	4 cut(s)	128, 475, 1061, 1268
Bse118I	RCCGGY	3 cut(s)	914, 1091, 2275
Bse1I	ACTGG	4 cut(s)	111, 469, 1066, 1467
BseBI	CCWGG	6 cut(s)	32, 838, 944, 1056, 1612, 2361
BseCI	ATCGAT	1 cut(s)	213
BseDI	CCNNGG	6 cut(s)	31, 80, 2249, 2323, 2338, 2339
BseGI	GGATG	8 cut(s)	152, 268, 606, 1208, 1330, 1459, 1818, 2461
BseLI	CCNNNNNNNGG	4 cut(s)	128, 475, 1061, 1268
BseMII	CTCAG	5 cut(s)	399, 1718, 1791, 2118, 2273
BseNI	ACTGG	4 cut(s)	111, 469, 1066, 1467
BseRI	GAGGAG	5 cut(s)	1526, 1655, 1943, 1946, 2238
BseSI	GKGCMC	3 cut(s)	38, 862, 1676
BseXI	GCAGC	5 cut(s)	853, 1130, 1172, 1760, 2096
BseYI	CCCAGC	1 cut(s)	2306
BsgI	GTGCAG	2 cut(s)	1302, 1587
Bsh1285I	CGRYCG	1 cut(s)	237
BshVI	ATCGAT	1 cut(s)	213
BsiEI	CGRYCG	1 cut(s)	237
BsiHKAI	GWGCWC	2 cut(s)	862, 1915
BsiHKCI	CYCGRG	1 cut(s)	2339
BsiSI	CCGG	6 cut(s)	598, 883, 915, 1092, 2276, 2340
BslFI	GGGAC	2 cut(s)	2243, 2501
BslI	CCNNNNNNNGG	4 cut(s)	128, 475, 1061, 1268
BsmAI	GTCTC	7 cut(s)	97, 322, 439, 1796, 2168, 2250, 2399
BsmFI	GGGAC	2 cut(s)	2243, 2501
Bso31I	GGTCTC	2 cut(s)	2250, 2399
BsoBI	CYCGRG	1 cut(s)	2339
Bsp1286I	GDGCHC	6 cut(s)	38, 65, 862, 1676, 1915, 2296
Bsp1407I	TGTACA	1 cut(s)	1888
Bsp143I	GATC	8 cut(s)	392, 403, 866, 972, 1390, 1780, 1962, 2065
Bsp19I	CCATGG	1 cut(s)	2323
BspACI	CCGC	5 cut(s)	179, 733, 781, 958, 1414
BspCNI	CTCAG	5 cut(s)	400, 1719, 1792, 2119, 2272
BspDI	ATCGAT	1 cut(s)	213
BspLI	GGNNCC	3 cut(s)	405, 2293, 2517
BspMAI	CTGCAG	4 cut(s)	718, 969, 2019, 2269
BspMI	ACCTGC	1 cut(s)	694
BspPI	GGATC	7 cut(s)	398, 400, 411, 874, 1385, 1775, 1970
BspTNI	GGTCTC	2 cut(s)	2250, 2399
BsrFI	RCCGGY	3 cut(s)	914, 1091, 2275
BsrGI	TGTACA	1 cut(s)	1888
BsrI	ACTGG	4 cut(s)	111, 469, 1066, 1467
BssAI	RCCGGY	3 cut(s)	914, 1091, 2275
BssECI	CCNNGG	6 cut(s)	31, 80, 2249, 2323, 2338, 2339
BssMI	GATC	8 cut(s)	392, 403, 866, 972, 1390, 1780, 1962, 2065
BssNI	GRCGYC	1 cut(s)	583
BssSI	CACGAG	1 cut(s)	1167
BssT1I	CCWWGG	2 cut(s)	80, 2323
Bst2BI	CACGAG	1 cut(s)	1167
Bst2UI	CCWGG	6 cut(s)	32, 838, 944, 1056, 1612, 2361
Bst4CI	ACNGT	3 cut(s)	614, 682, 706
Bst6I	CTCTTC	3 cut(s)	163, 993, 1503
BstACI	GRCGYC	1 cut(s)	583
BstAPI	GCANNNNNTGC	3 cut(s)	637, 1023, 1754
BstAUI	TGTACA	1 cut(s)	1888
BstDEI	CTNAG	7 cut(s)	408, 1621, 1727, 1800, 2127, 2150, 2259
BstDSI	CCRYGG	1 cut(s)	2323
BstF5I	GGATG	8 cut(s)	152, 268, 606, 1208, 1330, 1459, 1818, 2461
BstHHI	GCGC	3 cut(s)	43, 1842, 2392
BstKTI	GATC	8 cut(s)	395, 406, 869, 975, 1393, 1783, 1965, 2068
BstMAI	GTCTC	7 cut(s)	97, 322, 439, 1796, 2168, 2250, 2399
BstMBI	GATC	8 cut(s)	392, 403, 866, 972, 1390, 1780, 1962, 2065
BstMCI	CGRYCG	1 cut(s)	237
BstMWI	GCNNNNNNNGC	8 cut(s)	637, 850, 964, 1023, 1097, 1754, 1763, 1837
BstNI	CCWGG	6 cut(s)	32, 838, 944, 1056, 1612, 2361
BstNSI	RCATGY	2 cut(s)	1484, 1911
BstSCI	CCNGG	9 cut(s)	30, 836, 882, 942, 1054, 1610, 2338, 2339, 2359
BstSFI	CTRYAG	7 cut(s)	714, 965, 1896, 2015, 2050, 2169, 2265
BstSLI	GKGCMC	3 cut(s)	38, 862, 1676
BstV1I	GCAGC	5 cut(s)	853, 1130, 1172, 1760, 2096
BstV2I	GAAGAC	2 cut(s)	1858, 2511
BstX2I	RGATCY	2 cut(s)	403, 1962
BstYI	RGATCY	2 cut(s)	403, 1962
Bsu15I	ATCGAT	1 cut(s)	213
BsuI	GTATCC	1 cut(s)	2247
BsuTUI	ATCGAT	1 cut(s)	213
BtgI	CCRYGG	1 cut(s)	2323
BtgZI	GCGATG	1 cut(s)	2326
BtrI	CACGTC	1 cut(s)	1637
BtsCI	GGATG	8 cut(s)	152, 268, 606, 1208, 1330, 1459, 1818, 2461
BtsI	GCAGTG	2 cut(s)	36, 2274
BtsIMutI	CAGTG	7 cut(s)	36, 439, 513, 1128, 1797, 1845, 2274
BveI	ACCTGC	1 cut(s)	694
CaiI	CAGNNNCTG	3 cut(s)	106, 686, 1061
CfoI	GCGC	3 cut(s)	43, 1842, 2392
Cfr10I	RCCGGY	3 cut(s)	914, 1091, 2275
Cfr13I	GGNCC	7 cut(s)	109, 176, 360, 1049, 1259, 1411, 2515
Cfr9I	CCCGGG	1 cut(s)	2339
ClaI	ATCGAT	1 cut(s)	213
CpoI	CGGWCCG	1 cut(s)	176
CseI	GACGC	2 cut(s)	572, 842
Csp6I	GTAC	7 cut(s)	481, 683, 1037, 1701, 1889, 2147, 2158
CspCI	CAANNNNNGTGG	2 cut(s)	1237, 1272
CspI	CGGWCCG	1 cut(s)	176
CviAII	CATG	8 cut(s)	44, 340, 587, 775, 1046, 1481, 1908, 2324
CviQI	GTAC	7 cut(s)	481, 683, 1037, 1701, 1889, 2147, 2158
DdeI	CTNAG	7 cut(s)	408, 1621, 1727, 1800, 2127, 2150, 2259
DpnI	GATC	8 cut(s)	394, 405, 868, 974, 1392, 1782, 1964, 2067
DpnII	GATC	8 cut(s)	392, 403, 866, 972, 1390, 1780, 1962, 2065
DraI	TTTAAA	2 cut(s)	987, 1333
DrdI	GACNNNNNNGTC	1 cut(s)	2513
DriI	GACNNNNNGTC	1 cut(s)	335
DseDI	GACNNNNNNGTC	1 cut(s)	2513
EaeI	YGGCCR	5 cut(s)	493, 782, 940, 1464, 2532
Eam1104I	CTCTTC	3 cut(s)	163, 993, 1503
Eam1105I	GACNNNNNGTC	1 cut(s)	335
EarI	CTCTTC	3 cut(s)	163, 993, 1503
Eco130I	CCWWGG	2 cut(s)	80, 2323
Eco147I	AGGCCT	1 cut(s)	1299
Eco24I	GRGCYC	2 cut(s)	65, 2296
Eco31I	GGTCTC	2 cut(s)	2250, 2399
Eco32I	GATATC	2 cut(s)	211, 1384
Eco47I	GGWCC	4 cut(s)	176, 1049, 1259, 2515
Eco57I	CTGAAG	7 cut(s)	415, 1289, 1514, 1527, 2238, 2472, 2502
Eco88I	CYCGRG	1 cut(s)	2339
EcoO109I	RGGNCCY	2 cut(s)	360, 2515
EcoRII	CCWGG	6 cut(s)	30, 836, 942, 1054, 1610, 2359
EcoRV	GATATC	2 cut(s)	211, 1384
EcoT14I	CCWWGG	2 cut(s)	80, 2323
EcoT38I	GRGCYC	2 cut(s)	65, 2296
ErhI	CCWWGG	2 cut(s)	80, 2323
FaeI	CATG	8 cut(s)	47, 343, 590, 778, 1049, 1484, 1911, 2327
FalI	AAGNNNNNCTT	6 cut(s)	1023, 1055, 1287, 1319, 1400, 1432
FaqI	GGGAC	2 cut(s)	2243, 2501
FatI	CATG	8 cut(s)	43, 339, 586, 774, 1045, 1480, 1907, 2323
FauI	CCCGC	1 cut(s)	951
FauNDI	CATATG	3 cut(s)	722, 2035, 2450
FblI	GTMKAC	1 cut(s)	1459
Fnu4HI	GCNGC	8 cut(s)	734, 782, 842, 1119, 1161, 1414, 1749, 2085
FokI	GGATG	8 cut(s)	139, 275, 613, 1195, 1337, 1466, 1805, 2468
FriOI	GRGCYC	2 cut(s)	65, 2296
Fsp4HI	GCNGC	8 cut(s)	734, 782, 842, 1119, 1161, 1414, 1749, 2085
FspBI	CTAG	5 cut(s)	825, 1188, 1355, 1485, 1917
FspI	TGCGCA	1 cut(s)	42
GlaI	GCGC	3 cut(s)	42, 1841, 2391
GluI	GCNGC	8 cut(s)	734, 782, 842, 1119, 1161, 1414, 1749, 2085
GsaI	CCCAGC	1 cut(s)	2310
GsuI	CTGGAG	2 cut(s)	1038, 1670
HapII	CCGG	6 cut(s)	598, 883, 915, 1092, 2276, 2340
HgaI	GACGC	2 cut(s)	572, 842
HhaI	GCGC	3 cut(s)	43, 1842, 2392
Hin1I	GRCGYC	1 cut(s)	583
Hin1II	CATG	8 cut(s)	47, 343, 590, 778, 1049, 1484, 1911, 2327
Hin6I	GCGC	3 cut(s)	41, 1840, 2390
HinP1I	GCGC	3 cut(s)	41, 1840, 2390
HincII	GTYRAC	3 cut(s)	193, 595, 1948
HindII	GTYRAC	3 cut(s)	193, 595, 1948
HindIII	AAGCTT	3 cut(s)	1986, 2090, 2484
HinfI	GANTC	5 cut(s)	171, 908, 2056, 2319, 2415
HpaII	CCGG	6 cut(s)	598, 883, 915, 1092, 2276, 2340
HphI	GGTGA	1 cut(s)	1197
Hpy166II	GTNNAC	9 cut(s)	193, 595, 860, 1037, 1259, 1341, 1460, 1891, 1948
Hpy8I	GTNNAC	9 cut(s)	193, 595, 860, 1037, 1259, 1341, 1460, 1891, 1948
Hpy99I	CGWCG	3 cut(s)	121, 229, 858
HpyAV	CCTTC	7 cut(s)	253, 536, 1468, 1510, 1538, 1609, 1855
HpyCH4III	ACNGT	3 cut(s)	614, 682, 706
HpyCH4IV	ACGT	6 cut(s)	27, 116, 465, 1252, 1636, 1676
HpyF10VI	GCNNNNNNNGC	8 cut(s)	637, 850, 964, 1023, 1097, 1754, 1763, 1837
HpyF3I	CTNAG	7 cut(s)	408, 1621, 1727, 1800, 2127, 2150, 2259
HpySE526I	ACGT	6 cut(s)	27, 116, 465, 1252, 1636, 1676
Hsp92I	GRCGYC	1 cut(s)	583
Hsp92II	CATG	8 cut(s)	47, 343, 590, 778, 1049, 1484, 1911, 2327
HspAI	GCGC	3 cut(s)	41, 1840, 2390
KroI	GCCGGC	1 cut(s)	1091
KroNI	GCCGGC	1 cut(s)	1093
Kzo9I	GATC	8 cut(s)	392, 403, 866, 972, 1390, 1780, 1962, 2065
LmnI	GCTCC	5 cut(s)	354, 545, 1642, 1918, 2291
Lsp1109I	GCAGC	5 cut(s)	853, 1130, 1172, 1760, 2096
LweI	GCATC	7 cut(s)	253, 591, 649, 768, 1026, 1172, 1225
MaeI	CTAG	5 cut(s)	825, 1188, 1355, 1485, 1917
MaeII	ACGT	6 cut(s)	27, 116, 465, 1252, 1636, 1676
MaeIII	GTNAC	3 cut(s)	434, 2329, 2347
MalI	GATC	8 cut(s)	394, 405, 868, 974, 1392, 1782, 1964, 2067
MboI	GATC	8 cut(s)	392, 403, 866, 972, 1390, 1780, 1962, 2065
MflI	RGATCY	2 cut(s)	403, 1962
MhlI	GDGCHC	6 cut(s)	38, 65, 862, 1676, 1915, 2296
MlsI	TGGCCA	4 cut(s)	495, 942, 1466, 2534
MluNI	TGGCCA	4 cut(s)	495, 942, 1466, 2534
MlyI	GAGTC	2 cut(s)	180, 2424
MmeI	TCCRAC	3 cut(s)	154, 596, 1940
Mox20I	TGGCCA	4 cut(s)	495, 942, 1466, 2534
MroNI	GCCGGC	1 cut(s)	1091
MroXI	GAANNNNTTC	4 cut(s)	1002, 1865, 2100, 2463
MscI	TGGCCA	4 cut(s)	495, 942, 1466, 2534
MseI	TTAA	7 cut(s)	386, 800, 986, 1332, 2211, 2475, 2528
Msp20I	TGGCCA	4 cut(s)	495, 942, 1466, 2534
MspA1I	CMGCKG	2 cut(s)	1751, 2168
MspI	CCGG	6 cut(s)	598, 883, 915, 1092, 2276, 2340
MspR9I	CCNGG	9 cut(s)	32, 838, 884, 944, 1056, 1612, 2340, 2341, 2361
MvaI	CCWGG	6 cut(s)	32, 838, 944, 1056, 1612, 2361
MwoI	GCNNNNNNNGC	8 cut(s)	637, 850, 964, 1023, 1097, 1754, 1763, 1837
NaeI	GCCGGC	1 cut(s)	1093
NciI	CCSGG	3 cut(s)	884, 2340, 2341
NcoI	CCATGG	1 cut(s)	2323
NdeI	CATATG	3 cut(s)	722, 2035, 2450
NdeII	GATC	8 cut(s)	392, 403, 866, 972, 1390, 1780, 1962, 2065
NgoMIV	GCCGGC	1 cut(s)	1091
NlaIII	CATG	8 cut(s)	47, 343, 590, 778, 1049, 1484, 1911, 2327
NlaIV	GGNNCC	3 cut(s)	405, 2293, 2517
NmuCI	GTSAC	2 cut(s)	434, 2329
NsbI	TGCGCA	1 cut(s)	42
NspI	RCATGY	2 cut(s)	1484, 1911
PaeI	GCATGC	1 cut(s)	1484
PceI	AGGCCT	1 cut(s)	1299
PdiI	GCCGGC	1 cut(s)	1093
PdmI	GAANNNNTTC	4 cut(s)	1002, 1865, 2100, 2463
PfeI	GAWTC	3 cut(s)	908, 2056, 2319
PflMI	CCANNNNNTGG	2 cut(s)	475, 1061
PfoI	TCCNGGA	1 cut(s)	1054
PkrI	GCNGC	8 cut(s)	735, 783, 843, 1120, 1162, 1415, 1750, 2086
PleI	GAGTC	2 cut(s)	179, 2423
PpsI	GAGTC	2 cut(s)	179, 2423
PpuMI	RGGWCCY	1 cut(s)	2515
PsiI	TTATAA	1 cut(s)	1430
Psp5II	RGGWCCY	1 cut(s)	2515
Psp6I	CCWGG	6 cut(s)	30, 836, 942, 1054, 1610, 2359
PspFI	CCCAGC	1 cut(s)	2306
PspGI	CCWGG	6 cut(s)	30, 836, 942, 1054, 1610, 2359
PspN4I	GGNNCC	3 cut(s)	405, 2293, 2517
PspPI	GGNCC	7 cut(s)	109, 176, 360, 1049, 1259, 1411, 2515
PspPPI	RGGWCCY	1 cut(s)	2515
PstI	CTGCAG	4 cut(s)	718, 969, 2019, 2269
PstNI	CAGNNNCTG	3 cut(s)	106, 686, 1061
PsuI	RGATCY	2 cut(s)	403, 1962
PvuII	CAGCTG	2 cut(s)	1751, 2168
RsaI	GTAC	7 cut(s)	482, 684, 1038, 1702, 1890, 2148, 2159
RsaNI	GTAC	7 cut(s)	481, 683, 1037, 1701, 1889, 2147, 2158
Rsr2I	CGGWCCG	1 cut(s)	176
RsrII	CGGWCCG	1 cut(s)	176
SaqAI	TTAA	7 cut(s)	386, 800, 986, 1332, 2211, 2475, 2528
SatI	GCNGC	8 cut(s)	734, 782, 842, 1119, 1161, 1414, 1749, 2085
Sau3AI	GATC	8 cut(s)	392, 403, 866, 972, 1390, 1780, 1962, 2065
Sau96I	GGNCC	7 cut(s)	109, 176, 360, 1049, 1259, 1411, 2515
ScaI	AGTACT	2 cut(s)	482, 1702
SchI	GAGTC	2 cut(s)	180, 2424
ScrFI	CCNGG	9 cut(s)	32, 838, 884, 944, 1056, 1612, 2340, 2341, 2361
SduI	GDGCHC	6 cut(s)	38, 65, 862, 1676, 1915, 2296
SfaNI	GCATC	7 cut(s)	253, 591, 649, 768, 1026, 1172, 1225
SfcI	CTRYAG	7 cut(s)	714, 965, 1896, 2015, 2050, 2169, 2265
SinI	GGWCC	4 cut(s)	176, 1049, 1259, 2515
SmaI	CCCGGG	1 cut(s)	2341
SmlI	CTYRAG	2 cut(s)	848, 1870
SmoI	CTYRAG	2 cut(s)	848, 1870
SphI	GCATGC	1 cut(s)	1484
SseBI	AGGCCT	1 cut(s)	1299
SsiI	CCGC	5 cut(s)	179, 733, 781, 958, 1414
SspMI	CTAG	5 cut(s)	825, 1188, 1355, 1485, 1917
StuI	AGGCCT	1 cut(s)	1299
StyD4I	CCNGG	9 cut(s)	30, 836, 882, 942, 1054, 1610, 2338, 2339, 2359
StyI	CCWWGG	2 cut(s)	80, 2323
TaaI	ACNGT	3 cut(s)	614, 682, 706
TaiI	ACGT	6 cut(s)	30, 119, 468, 1255, 1639, 1679
TaqI	TCGA	4 cut(s)	213, 1741, 1991, 2104
TaqII	GACCGA	1 cut(s)	223
TatI	WGTACW	5 cut(s)	480, 1036, 1700, 1888, 2146
TauI	GCSGC	3 cut(s)	736, 784, 1416
TfiI	GAWTC	3 cut(s)	908, 2056, 2319
Tru1I	TTAA	7 cut(s)	386, 800, 986, 1332, 2211, 2475, 2528
Tru9I	TTAA	7 cut(s)	386, 800, 986, 1332, 2211, 2475, 2528
TscAI	CASTG	7 cut(s)	43, 439, 513, 1135, 1804, 1852, 2274
TseFI	GTSAC	2 cut(s)	434, 2329
TseI	GCWGC	5 cut(s)	841, 1118, 1160, 1748, 2084
Tsp45I	GTSAC	2 cut(s)	434, 2329
TspDTI	ATGAA	9 cut(s)	42, 1011, 1034, 1605, 1618, 2124, 2130, 2298, 2472
TspGWI	ACGGA	2 cut(s)	1565, 1811
TspMI	CCCGGG	1 cut(s)	2339
TspRI	CASTG	7 cut(s)	43, 439, 513, 1135, 1804, 1852, 2274
Van91I	CCANNNNNTGG	2 cut(s)	475, 1061
VneI	GTGCAC	1 cut(s)	858
VpaK11BI	GGWCC	4 cut(s)	176, 1049, 1259, 2515
XceI	RCATGY	2 cut(s)	1484, 1911
XcmI	CCANNNNNNNNNTGG	1 cut(s)	612
XmaI	CCCGGG	1 cut(s)	2339
XmiI	GTMKAC	1 cut(s)	1459
XmnI	GAANNNNTTC	4 cut(s)	1002, 1865, 2100, 2463
XspI	CTAG	5 cut(s)	825, 1188, 1355, 1485, 1917
ZrmI	AGTACT	2 cut(s)	482, 1702

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.