Structure-specific endonuclease subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G43210 |
| fragaria_vesca | FvH4_7g01930 |
| malus_domestica | MD02G1299300.v1.1 |
| prunus_persica | Prupe.2G025000_v2.0.a1 Prupe.2G025000_v2.0.a1 |
| pyrus_communis | pycom02g25170 |
| rosa_chinensis | RchiOBHm_Chr1g0318641 RchiOBHm_Chr1g0318771 |
| rosa_laevigata | RLG00000030521 |
| rosa_multiflora | Rmu_sc0001304.1_g000040 Rmu_sc0002545.1_g000016 |
| rosa_roxburghii | Rroxscaffold_4G00329010 |
| rosa_rugosa | Rorug01G0022400 Rorug01G0022400 |
| rosa_samantha | Rh1AG035500 Rh1AG238000 Rh1BG031100 Rh1CG034400 Rh1CG222400 Rh1DG036000 Rh5DG414300 |
| rosa_wichuraiana | Rw1G002770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 329 |
| AgsI | TTSAA | 4 cut(s) | 112, 220, 307, 335 |
| AluBI | AGCT | 3 cut(s) | 323, 363, 446 |
| AluI | AGCT | 3 cut(s) | 323, 363, 446 |
| AoxI | GGCC | 1 cut(s) | 505 |
| ApaI | GGGCCC | 1 cut(s) | 509 |
| ApeKI | GCWGC | 3 cut(s) | 82, 427, 443 |
| ApoI | RAATTY | 1 cut(s) | 329 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 264, 296 |
| AspS9I | GGNCC | 3 cut(s) | 310, 505, 506 |
| AsuHPI | GGTGA | 2 cut(s) | 187, 245 |
| AvaII | GGWCC | 1 cut(s) | 310 |
| BaeGI | GKGCMC | 1 cut(s) | 509 |
| BanII | GRGCYC | 1 cut(s) | 509 |
| BbsI | GAAGAC | 1 cut(s) | 277 |
| BbvI | GCAGC | 3 cut(s) | 69, 414, 455 |
| BccI | CCATC | 1 cut(s) | 127 |
| BceAI | ACGGC | 1 cut(s) | 198 |
| BfaI | CTAG | 1 cut(s) | 369 |
| BisI | GCNGC | 3 cut(s) | 83, 428, 444 |
| BlsI | GCNGC | 3 cut(s) | 84, 429, 445 |
| Bme18I | GGWCC | 1 cut(s) | 310 |
| BmgT120I | GGNCC | 3 cut(s) | 310, 505, 506 |
| BmiI | GGNNCC | 1 cut(s) | 507 |
| BmrI | ACTGGG | 1 cut(s) | 512 |
| BmsI | GCATC | 1 cut(s) | 266 |
| BmuI | ACTGGG | 1 cut(s) | 512 |
| BpiI | GAAGAC | 1 cut(s) | 277 |
| BsaJI | CCNNGG | 1 cut(s) | 275 |
| Bse1I | ACTGG | 1 cut(s) | 507 |
| Bse3DI | GCAATG | 1 cut(s) | 422 |
| BseDI | CCNNGG | 1 cut(s) | 275 |
| BseGI | GGATG | 2 cut(s) | 153, 257 |
| BseMI | GCAATG | 1 cut(s) | 422 |
| BseNI | ACTGG | 1 cut(s) | 507 |
| BseSI | GKGCMC | 1 cut(s) | 509 |
| BseXI | GCAGC | 3 cut(s) | 69, 414, 455 |
| Bsh1285I | CGRYCG | 1 cut(s) | 80 |
| BshFI | GGCC | 1 cut(s) | 507 |
| BsiEI | CGRYCG | 1 cut(s) | 80 |
| BsnI | GGCC | 1 cut(s) | 507 |
| Bsp120I | GGGCCC | 1 cut(s) | 505 |
| Bsp1286I | GDGCHC | 1 cut(s) | 509 |
| Bsp143I | GATC | 1 cut(s) | 77 |
| Bsp19I | CCATGG | 1 cut(s) | 275 |
| BspANI | GGCC | 1 cut(s) | 507 |
| BspLI | GGNNCC | 1 cut(s) | 507 |
| BsrDI | GCAATG | 1 cut(s) | 422 |
| BsrI | ACTGG | 1 cut(s) | 507 |
| BssECI | CCNNGG | 1 cut(s) | 275 |
| BssMI | GATC | 1 cut(s) | 77 |
| BssT1I | CCWWGG | 1 cut(s) | 275 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 263 |
| BstC8I | GCNNGC | 2 cut(s) | 289, 441 |
| BstDSI | CCRYGG | 1 cut(s) | 275 |
| BstF5I | GGATG | 2 cut(s) | 153, 257 |
| BstKTI | GATC | 1 cut(s) | 80 |
| BstMBI | GATC | 1 cut(s) | 77 |
| BstMCI | CGRYCG | 1 cut(s) | 80 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 263, 436 |
| BstNSI | RCATGY | 1 cut(s) | 291 |
| BstSLI | GKGCMC | 1 cut(s) | 509 |
| BstV1I | GCAGC | 3 cut(s) | 69, 414, 455 |
| BstV2I | GAAGAC | 1 cut(s) | 277 |
| BsuRI | GGCC | 1 cut(s) | 507 |
| BtgI | CCRYGG | 1 cut(s) | 275 |
| BtsCI | GGATG | 2 cut(s) | 153, 257 |
| BtsIMutI | CAGTG | 1 cut(s) | 198 |
| Cac8I | GCNNGC | 2 cut(s) | 289, 441 |
| Cfr13I | GGNCC | 3 cut(s) | 310, 505, 506 |
| CviAII | CATG | 4 cut(s) | 138, 276, 288, 299 |
| CviJI | RGCY | 4 cut(s) | 323, 363, 446, 507 |
| CviKI_1 | RGCY | 4 cut(s) | 323, 363, 446, 507 |
| DpnI | GATC | 1 cut(s) | 79 |
| DpnII | GATC | 1 cut(s) | 77 |
| Eco130I | CCWWGG | 1 cut(s) | 275 |
| Eco24I | GRGCYC | 1 cut(s) | 509 |
| Eco47I | GGWCC | 1 cut(s) | 310 |
| EcoO109I | RGGNCCY | 1 cut(s) | 506 |
| EcoT14I | CCWWGG | 1 cut(s) | 275 |
| EcoT38I | GRGCYC | 1 cut(s) | 509 |
| ErhI | CCWWGG | 1 cut(s) | 275 |
| FaeI | CATG | 4 cut(s) | 141, 279, 291, 302 |
| FaiI | YATR | 6 cut(s) | 139, 176, 228, 277, 289, 300 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 307, 339 |
| FatI | CATG | 4 cut(s) | 137, 275, 287, 298 |
| Fnu4HI | GCNGC | 3 cut(s) | 83, 428, 444 |
| FokI | GGATG | 2 cut(s) | 140, 244 |
| FriOI | GRGCYC | 1 cut(s) | 509 |
| Fsp4HI | GCNGC | 3 cut(s) | 83, 428, 444 |
| FspBI | CTAG | 1 cut(s) | 369 |
| GluI | GCNGC | 3 cut(s) | 83, 428, 444 |
| HaeIII | GGCC | 1 cut(s) | 507 |
| Hin1II | CATG | 4 cut(s) | 141, 279, 291, 302 |
| HindIII | AAGCTT | 2 cut(s) | 321, 361 |
| HinfI | GANTC | 2 cut(s) | 9, 335 |
| HphI | GGTGA | 2 cut(s) | 187, 245 |
| Hpy166II | GTNNAC | 1 cut(s) | 236 |
| Hpy188I | TCNGA | 1 cut(s) | 97 |
| Hpy188III | TCNNGA | 2 cut(s) | 129, 357 |
| Hpy8I | GTNNAC | 1 cut(s) | 236 |
| HpyAV | CCTTC | 2 cut(s) | 36, 126 |
| HpyCH4IV | ACGT | 1 cut(s) | 186 |
| HpyCH4V | TGCA | 5 cut(s) | 4, 251, 287, 430, 477 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 263, 436 |
| HpySE526I | ACGT | 1 cut(s) | 186 |
| Hsp92II | CATG | 4 cut(s) | 141, 279, 291, 302 |
| Kzo9I | GATC | 1 cut(s) | 77 |
| LmnI | GCTCC | 1 cut(s) | 397 |
| LpnPI | CCDG | 5 cut(s) | 252, 274, 421, 455, 488 |
| Lsp1109I | GCAGC | 3 cut(s) | 69, 414, 455 |
| LweI | GCATC | 1 cut(s) | 266 |
| MaeI | CTAG | 1 cut(s) | 369 |
| MaeII | ACGT | 1 cut(s) | 186 |
| MaeIII | GTNAC | 2 cut(s) | 193, 414 |
| MalI | GATC | 1 cut(s) | 79 |
| MboI | GATC | 1 cut(s) | 77 |
| MboII | GAAGA | 2 cut(s) | 110, 282 |
| MhlI | GDGCHC | 1 cut(s) | 509 |
| MluCI | AATT | 2 cut(s) | 329, 489 |
| MlyI | GAGTC | 1 cut(s) | 3 |
| MseI | TTAA | 1 cut(s) | 459 |
| MslI | CAYNNNNRTG | 1 cut(s) | 231 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 263, 436 |
| NcoI | CCATGG | 1 cut(s) | 275 |
| NdeII | GATC | 1 cut(s) | 77 |
| NlaIII | CATG | 4 cut(s) | 141, 279, 291, 302 |
| NlaIV | GGNNCC | 1 cut(s) | 507 |
| NmuCI | GTSAC | 2 cut(s) | 193, 414 |
| NspI | RCATGY | 1 cut(s) | 291 |
| PaeI | GCATGC | 1 cut(s) | 291 |
| PfeI | GAWTC | 1 cut(s) | 335 |
| PkrI | GCNGC | 3 cut(s) | 84, 429, 445 |
| Ple19I | CGATCG | 1 cut(s) | 80 |
| PleI | GAGTC | 1 cut(s) | 3 |
| PpsI | GAGTC | 1 cut(s) | 3 |
| PspN4I | GGNNCC | 1 cut(s) | 507 |
| PspOMI | GGGCCC | 1 cut(s) | 505 |
| PspPI | GGNCC | 3 cut(s) | 310, 505, 506 |
| PvuI | CGATCG | 1 cut(s) | 80 |
| RseI | CAYNNNNRTG | 1 cut(s) | 231 |
| SaqAI | TTAA | 1 cut(s) | 459 |
| SatI | GCNGC | 3 cut(s) | 83, 428, 444 |
| Sau3AI | GATC | 1 cut(s) | 77 |
| Sau96I | GGNCC | 3 cut(s) | 310, 505, 506 |
| SchI | GAGTC | 1 cut(s) | 3 |
| SduI | GDGCHC | 1 cut(s) | 509 |
| SetI | ASST | 8 cut(s) | 137, 185, 189, 325, 365, 396, 448, 466 |
| SfaNI | GCATC | 1 cut(s) | 266 |
| SinI | GGWCC | 1 cut(s) | 310 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 231 |
| SmlI | CTYRAG | 1 cut(s) | 13 |
| SmoI | CTYRAG | 1 cut(s) | 13 |
| SphI | GCATGC | 1 cut(s) | 291 |
| Sse9I | AATT | 2 cut(s) | 329, 489 |
| SspMI | CTAG | 1 cut(s) | 369 |
| StyI | CCWWGG | 1 cut(s) | 275 |
| TaiI | ACGT | 1 cut(s) | 189 |
| TasI | AATT | 2 cut(s) | 329, 489 |
| TfiI | GAWTC | 1 cut(s) | 335 |
| Tru1I | TTAA | 1 cut(s) | 459 |
| Tru9I | TTAA | 1 cut(s) | 459 |
| TscAI | CASTG | 1 cut(s) | 205 |
| TseFI | GTSAC | 2 cut(s) | 193, 414 |
| TseI | GCWGC | 3 cut(s) | 82, 427, 443 |
| Tsp45I | GTSAC | 2 cut(s) | 193, 414 |
| TspRI | CASTG | 1 cut(s) | 205 |
| VpaK11BI | GGWCC | 1 cut(s) | 310 |
| XapI | RAATTY | 1 cut(s) | 329 |
| XceI | RCATGY | 1 cut(s) | 291 |
| XspI | CTAG | 1 cut(s) | 369 |