Structure-specific endonuclease subunit
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G43210 |
| fragaria_vesca | FvH4_7g01930 |
| malus_domestica | MD02G1299300.v1.1 |
| prunus_persica | Prupe.2G025000_v2.0.a1 Prupe.2G025000_v2.0.a1 |
| pyrus_communis | pycom02g25170 |
| rosa_chinensis | RchiOBHm_Chr1g0318641 RchiOBHm_Chr1g0318771 |
| rosa_laevigata | RLG00000030521 |
| rosa_multiflora | Rmu_sc0001304.1_g000040 Rmu_sc0002545.1_g000016 |
| rosa_roxburghii | Rroxscaffold_4G00329010 |
| rosa_rugosa | Rorug01G0022400 Rorug01G0022400 |
| rosa_samantha | Rh1AG035500 Rh1AG238000 Rh1BG031100 Rh1CG034400 Rh1CG222400 Rh1DG036000 Rh5DG414300 |
| rosa_wichuraiana | Rw1G002770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 505 |
| AcsI | RAATTY | 1 cut(s) | 118 |
| AfaI | GTAC | 2 cut(s) | 165, 469 |
| AgsI | TTSAA | 2 cut(s) | 298, 326 |
| AleI | CACNNNNGTG | 1 cut(s) | 222 |
| AluBI | AGCT | 2 cut(s) | 40, 437 |
| AluI | AGCT | 2 cut(s) | 40, 437 |
| ApeKI | GCWGC | 1 cut(s) | 434 |
| ApoI | RAATTY | 1 cut(s) | 118 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 135, 167, 255, 287 |
| AspS9I | GGNCC | 1 cut(s) | 301 |
| AsuHPI | GGTGA | 2 cut(s) | 44, 236 |
| AvaII | GGWCC | 1 cut(s) | 301 |
| BbsI | GAAGAC | 1 cut(s) | 268 |
| BbvI | GCAGC | 1 cut(s) | 446 |
| BccI | CCATC | 1 cut(s) | 198 |
| BisI | GCNGC | 1 cut(s) | 435 |
| BlsI | GCNGC | 1 cut(s) | 436 |
| Bme18I | GGWCC | 1 cut(s) | 301 |
| BmgT120I | GGNCC | 1 cut(s) | 301 |
| BmsI | GCATC | 1 cut(s) | 257 |
| BpiI | GAAGAC | 1 cut(s) | 268 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 343, 375 |
| BpuEI | CTTGAG | 1 cut(s) | 46 |
| BsaJI | CCNNGG | 1 cut(s) | 266 |
| Bse1I | ACTGG | 1 cut(s) | 491 |
| BseDI | CCNNGG | 1 cut(s) | 266 |
| BseGI | GGATG | 2 cut(s) | 169, 248 |
| BseNI | ACTGG | 1 cut(s) | 491 |
| BseRI | GAGGAG | 1 cut(s) | 49 |
| BseXI | GCAGC | 1 cut(s) | 446 |
| BsrI | ACTGG | 1 cut(s) | 491 |
| BssECI | CCNNGG | 1 cut(s) | 266 |
| Bst4CI | ACNGT | 1 cut(s) | 267 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 254 |
| BstC8I | GCNNGC | 2 cut(s) | 280, 432 |
| BstDEI | CTNAG | 1 cut(s) | 475 |
| BstDSI | CCRYGG | 1 cut(s) | 266 |
| BstF5I | GGATG | 2 cut(s) | 169, 248 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 254 |
| BstNSI | RCATGY | 1 cut(s) | 318 |
| BstV1I | GCAGC | 1 cut(s) | 446 |
| BstV2I | GAAGAC | 1 cut(s) | 268 |
| BtgI | CCRYGG | 1 cut(s) | 266 |
| BtsCI | GGATG | 2 cut(s) | 169, 248 |
| Cac8I | GCNNGC | 2 cut(s) | 280, 432 |
| Cfr13I | GGNCC | 1 cut(s) | 301 |
| Csp6I | GTAC | 2 cut(s) | 164, 468 |
| CviAII | CATG | 3 cut(s) | 75, 290, 315 |
| CviJI | RGCY | 2 cut(s) | 40, 437 |
| CviKI_1 | RGCY | 2 cut(s) | 40, 437 |
| CviQI | GTAC | 2 cut(s) | 164, 468 |
| DdeI | CTNAG | 1 cut(s) | 475 |
| Eco47I | GGWCC | 1 cut(s) | 301 |
| EcoRI | GAATTC | 1 cut(s) | 118 |
| FaeI | CATG | 3 cut(s) | 78, 293, 318 |
| FaiI | YATR | 6 cut(s) | 76, 291, 316, 426, 458, 505 |
| FatI | CATG | 3 cut(s) | 74, 289, 314 |
| Fnu4HI | GCNGC | 1 cut(s) | 435 |
| FokI | GGATG | 2 cut(s) | 156, 235 |
| Fsp4HI | GCNGC | 1 cut(s) | 435 |
| GluI | GCNGC | 1 cut(s) | 435 |
| Hin1II | CATG | 3 cut(s) | 78, 293, 318 |
| HinfI | GANTC | 2 cut(s) | 12, 326 |
| HphI | GGTGA | 2 cut(s) | 44, 236 |
| Hpy166II | GTNNAC | 2 cut(s) | 164, 227 |
| Hpy188I | TCNGA | 2 cut(s) | 106, 210 |
| Hpy188III | TCNNGA | 2 cut(s) | 18, 194 |
| Hpy8I | GTNNAC | 2 cut(s) | 164, 227 |
| HpyAV | CCTTC | 1 cut(s) | 39 |
| HpyCH4III | ACNGT | 1 cut(s) | 267 |
| HpyCH4IV | ACGT | 1 cut(s) | 202 |
| HpyCH4V | TGCA | 2 cut(s) | 186, 320 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 254 |
| HpyF3I | CTNAG | 1 cut(s) | 475 |
| HpySE526I | ACGT | 1 cut(s) | 202 |
| Hsp92II | CATG | 3 cut(s) | 78, 293, 318 |
| LmnI | GCTCC | 1 cut(s) | 45 |
| LpnPI | CCDG | 3 cut(s) | 31, 243, 472 |
| Lsp1109I | GCAGC | 1 cut(s) | 446 |
| LweI | GCATC | 1 cut(s) | 257 |
| MaeII | ACGT | 1 cut(s) | 202 |
| MaeIII | GTNAC | 1 cut(s) | 405 |
| MboII | GAAGA | 1 cut(s) | 273 |
| MluCI | AATT | 2 cut(s) | 118, 480 |
| MlyI | GAGTC | 1 cut(s) | 6 |
| MnlI | CCTC | 8 cut(s) | 60, 67, 70, 136, 142, 177, 369, 423 |
| MseI | TTAA | 1 cut(s) | 450 |
| MslI | CAYNNNNRTG | 1 cut(s) | 222 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 254 |
| NlaIII | CATG | 3 cut(s) | 78, 293, 318 |
| NmuCI | GTSAC | 1 cut(s) | 405 |
| NspI | RCATGY | 1 cut(s) | 318 |
| OliI | CACNNNNGTG | 1 cut(s) | 222 |
| PfeI | GAWTC | 1 cut(s) | 326 |
| PkrI | GCNGC | 1 cut(s) | 436 |
| PleI | GAGTC | 1 cut(s) | 6 |
| PpsI | GAGTC | 1 cut(s) | 6 |
| PsiI | TTATAA | 1 cut(s) | 505 |
| PspPI | GGNCC | 1 cut(s) | 301 |
| RsaI | GTAC | 2 cut(s) | 165, 469 |
| RsaNI | GTAC | 2 cut(s) | 164, 468 |
| RseI | CAYNNNNRTG | 1 cut(s) | 222 |
| SaqAI | TTAA | 1 cut(s) | 450 |
| SatI | GCNGC | 1 cut(s) | 435 |
| Sau96I | GGNCC | 1 cut(s) | 301 |
| SchI | GAGTC | 1 cut(s) | 6 |
| SetI | ASST | 9 cut(s) | 42, 153, 169, 201, 205, 238, 387, 439, 457 |
| SfaNI | GCATC | 1 cut(s) | 257 |
| SinI | GGWCC | 1 cut(s) | 301 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 222 |
| SmlI | CTYRAG | 1 cut(s) | 61 |
| SmoI | CTYRAG | 1 cut(s) | 61 |
| Sse9I | AATT | 2 cut(s) | 118, 480 |
| TaaI | ACNGT | 1 cut(s) | 267 |
| TaiI | ACGT | 1 cut(s) | 205 |
| TaqI | TCGA | 3 cut(s) | 80, 116, 147 |
| TasI | AATT | 2 cut(s) | 118, 480 |
| TatI | WGTACW | 1 cut(s) | 467 |
| TfiI | GAWTC | 1 cut(s) | 326 |
| Tru1I | TTAA | 1 cut(s) | 450 |
| Tru9I | TTAA | 1 cut(s) | 450 |
| TseFI | GTSAC | 1 cut(s) | 405 |
| TseI | GCWGC | 1 cut(s) | 434 |
| Tsp45I | GTSAC | 1 cut(s) | 405 |
| TspDTI | ATGAA | 1 cut(s) | 324 |
| TspGWI | ACGGA | 1 cut(s) | 22 |
| VpaK11BI | GGWCC | 1 cut(s) | 301 |
| XapI | RAATTY | 1 cut(s) | 118 |
| XceI | RCATGY | 1 cut(s) | 318 |