Intron-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G38770 |
| fragaria_vesca | FvH4_7g02390 FvH4_7g02390 FvH4_7g02390 |
| malus_domestica | MD02G1293400.v1.1 MD07G1033300.v1.1 |
| prunus_persica | Prupe.2G030100_v2.0.a1 Prupe.2G030100_v2.0.a1 Prupe.2G030100_v2.0.a1 Prupe.2G030100_v2.0.a1 |
| pyrus_communis | pycom02g24750 pycom07g02350 pycom07g02360 |
| rosa_chinensis | RchiOBHm_Chr1g0319731 |
| rosa_laevigata | RLG00000030459 |
| rosa_multiflora | Rmu_sc0002539.1_g000116 |
| rosa_roxburghii | Rroxscaffold_4G00328150 |
| rosa_rugosa | Rorug01G0029800 |
| rosa_samantha | Rh1AG041700 Rh1BG039000 Rh1CG042600 Rh1DG027000 |
| rosa_wichuraiana | Rw1G003470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1803 |
| Acc65I | GGTACC | 1 cut(s) | 3870 |
| AccB1I | GGYRCC | 3 cut(s) | 1630, 3870, 4462 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1745 |
| AccI | GTMKAC | 3 cut(s) | 1077, 3045, 3862 |
| AccII | CGCG | 2 cut(s) | 1170, 3052 |
| AciI | CCGC | 9 cut(s) | 154, 160, 177, 1628, 1634, 2935, 3190, 4132, 4596 |
| AclWI | GGATC | 2 cut(s) | 1340, 1727 |
| AcoI | YGGCCR | 2 cut(s) | 2313, 3910 |
| AcsI | RAATTY | 8 cut(s) | 938, 1570, 2530, 2730, 3414, 3724, 4001, 4405 |
| AcuI | CTGAAG | 5 cut(s) | 1314, 3287, 3350, 4148, 4172 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 238, 493, 1745, 2042, 2585, 2705, 3457, 3817 |
| AflII | CTTAAG | 1 cut(s) | 3218 |
| AflIII | ACRYGT | 1 cut(s) | 471 |
| AjiI | CACGTC | 2 cut(s) | 472, 3330 |
| AjnI | CCWGG | 9 cut(s) | 810, 2302, 2482, 2584, 2671, 2698, 2793, 3621, 3632 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 4170, 4202 |
| AleI | CACNNNNGTG | 2 cut(s) | 1029, 4068 |
| Alw21I | GWGCWC | 6 cut(s) | 131, 390, 1036, 3335, 3412, 3955 |
| Alw26I | GTCTC | 7 cut(s) | 1416, 1592, 3573, 3675, 4104, 4121, 4186 |
| Alw44I | GTGCAC | 1 cut(s) | 3331 |
| AlwI | GGATC | 2 cut(s) | 1340, 1727 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1766 |
| Ama87I | CYCGRG | 3 cut(s) | 124, 2990, 4553 |
| AoxI | GGCC | 8 cut(s) | 102, 353, 986, 2313, 2518, 3635, 3910, 3970 |
| ApaLI | GTGCAC | 1 cut(s) | 3331 |
| ApoI | RAATTY | 8 cut(s) | 938, 1570, 2530, 2730, 3414, 3724, 4001, 4405 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1262, 1294 |
| AseI | ATTAAT | 4 cut(s) | 564, 1110, 1491, 1653 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3359 |
| Asp718I | GGTACC | 1 cut(s) | 3870 |
| AspLEI | GCGC | 4 cut(s) | 42, 1257, 2940, 3054 |
| AsuC2I | CCSGG | 5 cut(s) | 62, 84, 111, 368, 4417 |
| AsuII | TTCGAA | 2 cut(s) | 2437, 2789 |
| AsuNHI | GCTAGC | 1 cut(s) | 2881 |
| AvaI | CYCGRG | 3 cut(s) | 124, 2990, 4553 |
| AvaII | GGWCC | 7 cut(s) | 157, 189, 229, 2588, 2693, 3562, 4262 |
| BaeGI | GKGCMC | 3 cut(s) | 3335, 4108, 4465 |
| BaeI | ACNNNNGTAYC | 4 cut(s) | 2709, 2742, 3854, 3887 |
| BalI | TGGCCA | 2 cut(s) | 2315, 3912 |
| BanI | GGYRCC | 3 cut(s) | 1630, 3870, 4462 |
| BanII | GRGCYC | 1 cut(s) | 131 |
| BauI | CACGAG | 1 cut(s) | 4101 |
| BbsI | GAAGAC | 4 cut(s) | 545, 1928, 4260, 4509 |
| Bbv12I | GWGCWC | 6 cut(s) | 131, 390, 1036, 3335, 3412, 3955 |
| BceAI | ACGGC | 2 cut(s) | 3491, 4119 |
| BciT130I | CCWGG | 9 cut(s) | 812, 2304, 2484, 2586, 2673, 2700, 2795, 3623, 3634 |
| BciVI | GTATCC | 2 cut(s) | 2258, 4426 |
| BclI | TGATCA | 5 cut(s) | 690, 865, 1114, 2377, 3502 |
| BcnI | CCSGG | 5 cut(s) | 62, 84, 111, 368, 4417 |
| BcoDI | GTCTC | 7 cut(s) | 1416, 1592, 3573, 3675, 4104, 4121, 4186 |
| BfaI | CTAG | 3 cut(s) | 551, 1514, 2882 |
| BfoI | RGCGCY | 2 cut(s) | 43, 2941 |
| BfrI | CTTAAG | 1 cut(s) | 3218 |
| BfuI | GTATCC | 2 cut(s) | 2258, 4426 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 731, 1927 |
| BglII | AGATCT | 4 cut(s) | 249, 2209, 2975, 3673 |
| BmcAI | AGTACT | 1 cut(s) | 335 |
| Bme18I | GGWCC | 7 cut(s) | 157, 189, 229, 2588, 2693, 3562, 4262 |
| BmeT110I | CYCGRG | 3 cut(s) | 124, 2990, 4553 |
| BmgBI | CACGTC | 2 cut(s) | 472, 3330 |
| BmiI | GGNNCC | 7 cut(s) | 158, 231, 1206, 1632, 2694, 3872, 4464 |
| BmrI | ACTGGG | 1 cut(s) | 4121 |
| BmsI | GCATC | 8 cut(s) | 895, 1645, 2335, 3498, 3694, 4279, 4366, 4507 |
| BmtI | GCTAGC | 1 cut(s) | 2885 |
| BmuI | ACTGGG | 1 cut(s) | 4121 |
| BoxI | GACNNNNGTC | 2 cut(s) | 2586, 4260 |
| BpiI | GAAGAC | 4 cut(s) | 545, 1928, 4260, 4509 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 3122, 3154, 4547, 4579 |
| BpmI | CTGGAG | 8 cut(s) | 833, 911, 1070, 1521, 2966, 3434, 3682, 4562 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3198 |
| Bpu14I | TTCGAA | 2 cut(s) | 2437, 2789 |
| BpuEI | CTTGAG | 5 cut(s) | 509, 808, 976, 1003, 1048 |
| BpuMI | CCSGG | 5 cut(s) | 62, 84, 111, 368, 4417 |
| BsaBI | GATNNNNATC | 1 cut(s) | 4301 |
| BsaI | GGTCTC | 3 cut(s) | 3675, 4121, 4186 |
| BsaWI | WCCGGW | 1 cut(s) | 462 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1900, 1930 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 238, 493, 1745, 2042, 2585, 2705, 3457, 3817 |
| Bse118I | RCCGGY | 2 cut(s) | 94, 197 |
| Bse3DI | GCAATG | 2 cut(s) | 1264, 2106 |
| Bse8I | GATNNNNATC | 1 cut(s) | 4301 |
| BseBI | CCWGG | 9 cut(s) | 812, 2304, 2484, 2586, 2673, 2700, 2795, 3623, 3634 |
| BseJI | GATNNNNATC | 1 cut(s) | 4301 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 238, 493, 1745, 2042, 2585, 2705, 3457, 3817 |
| BseMI | GCAATG | 2 cut(s) | 1264, 2106 |
| BseRI | GAGGAG | 6 cut(s) | 759, 1553, 1913, 1994, 2565, 4400 |
| BseSI | GKGCMC | 3 cut(s) | 3335, 4108, 4465 |
| BseYI | CCCAGC | 3 cut(s) | 3054, 3977, 4479 |
| BsgI | GTGCAG | 3 cut(s) | 1914, 2268, 2826 |
| Bsh1236I | CGCG | 2 cut(s) | 1170, 3052 |
| Bsh1285I | CGRYCG | 1 cut(s) | 66 |
| BshFI | GGCC | 8 cut(s) | 104, 355, 988, 2315, 2520, 3637, 3912, 3972 |
| BshNI | GGYRCC | 3 cut(s) | 1630, 3870, 4462 |
| BsiEI | CGRYCG | 1 cut(s) | 66 |
| BsiHKAI | GWGCWC | 6 cut(s) | 131, 390, 1036, 3335, 3412, 3955 |
| BsiHKCI | CYCGRG | 3 cut(s) | 124, 2990, 4553 |
| BsiSI | CCGG | 8 cut(s) | 62, 84, 95, 111, 198, 368, 463, 4416 |
| BslFI | GGGAC | 4 cut(s) | 170, 1138, 2152, 4588 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 238, 493, 1745, 2042, 2585, 2705, 3457, 3817 |
| BsmAI | GTCTC | 7 cut(s) | 1416, 1592, 3573, 3675, 4104, 4121, 4186 |
| BsmBI | CGTCTC | 1 cut(s) | 1592 |
| BsmFI | GGGAC | 4 cut(s) | 170, 1138, 2152, 4588 |
| BsmI | GAATGC | 3 cut(s) | 1834, 3539, 3597 |
| BsnI | GGCC | 8 cut(s) | 104, 355, 988, 2315, 2520, 3637, 3912, 3972 |
| Bso31I | GGTCTC | 3 cut(s) | 3675, 4121, 4186 |
| BsoBI | CYCGRG | 3 cut(s) | 124, 2990, 4553 |
| Bsp119I | TTCGAA | 2 cut(s) | 2437, 2789 |
| Bsp1286I | GDGCHC | 8 cut(s) | 131, 390, 1036, 3335, 3412, 3955, 4108, 4465 |
| Bsp1407I | TGTACA | 1 cut(s) | 3654 |
| BspACI | CCGC | 9 cut(s) | 154, 160, 177, 1628, 1634, 2935, 3190, 4132, 4596 |
| BspANI | GGCC | 8 cut(s) | 104, 355, 988, 2315, 2520, 3637, 3912, 3972 |
| BspFNI | CGCG | 2 cut(s) | 1170, 3052 |
| BspHI | TCATGA | 2 cut(s) | 558, 1117 |
| BspLI | GGNNCC | 7 cut(s) | 158, 231, 1206, 1632, 2694, 3872, 4464 |
| BspOI | GCTAGC | 1 cut(s) | 2885 |
| BspPI | GGATC | 2 cut(s) | 1340, 1727 |
| BspQI | GCTCTTC | 2 cut(s) | 1440, 2484 |
| BspT104I | TTCGAA | 2 cut(s) | 2437, 2789 |
| BspT107I | GGYRCC | 3 cut(s) | 1630, 3870, 4462 |
| BspTI | CTTAAG | 1 cut(s) | 3218 |
| BspTNI | GGTCTC | 3 cut(s) | 3675, 4121, 4186 |
| BsrDI | GCAATG | 2 cut(s) | 1264, 2106 |
| BsrFI | RCCGGY | 2 cut(s) | 94, 197 |
| BsrGI | TGTACA | 1 cut(s) | 3654 |
| BssAI | RCCGGY | 2 cut(s) | 94, 197 |
| BssNAI | GTATAC | 1 cut(s) | 3046 |
| BssSI | CACGAG | 1 cut(s) | 4101 |
| BssT1I | CCWWGG | 6 cut(s) | 225, 726, 828, 1349, 2169, 3800 |
| Bst1107I | GTATAC | 1 cut(s) | 3046 |
| Bst2BI | CACGAG | 1 cut(s) | 4101 |
| Bst2UI | CCWGG | 9 cut(s) | 812, 2304, 2484, 2586, 2673, 2700, 2795, 3623, 3634 |
| Bst6I | CTCTTC | 6 cut(s) | 511, 798, 1440, 2484, 3237, 4641 |
| BstAFI | CTTAAG | 1 cut(s) | 3218 |
| BstAUI | TGTACA | 1 cut(s) | 3654 |
| BstBI | TTCGAA | 2 cut(s) | 2437, 2789 |
| BstC8I | GCNNGC | 8 cut(s) | 1224, 1761, 2841, 2845, 2883, 2970, 3192, 3309 |
| BstEII | GGTNACC | 1 cut(s) | 4061 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2583 |
| BstFNI | CGCG | 2 cut(s) | 1170, 3052 |
| BstH2I | RGCGCY | 2 cut(s) | 43, 2941 |
| BstHHI | GCGC | 4 cut(s) | 42, 1257, 2940, 3054 |
| BstMAI | GTCTC | 7 cut(s) | 1416, 1592, 3573, 3675, 4104, 4121, 4186 |
| BstMCI | CGRYCG | 1 cut(s) | 66 |
| BstNI | CCWGG | 9 cut(s) | 812, 2304, 2484, 2586, 2673, 2700, 2795, 3623, 3634 |
| BstNSI | RCATGY | 1 cut(s) | 899 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 2586, 4260 |
| BstPI | GGTNACC | 1 cut(s) | 4061 |
| BstSLI | GKGCMC | 3 cut(s) | 3335, 4108, 4465 |
| BstUI | CGCG | 2 cut(s) | 1170, 3052 |
| BstV2I | GAAGAC | 4 cut(s) | 545, 1928, 4260, 4509 |
| BstX2I | RGATCY | 4 cut(s) | 249, 2209, 2975, 3673 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 3801, 4568 |
| BstYI | RGATCY | 4 cut(s) | 249, 2209, 2975, 3673 |
| BstZ17I | GTATAC | 1 cut(s) | 3046 |
| BsuI | GTATCC | 2 cut(s) | 2258, 4426 |
| BsuRI | GGCC | 8 cut(s) | 104, 355, 988, 2315, 2520, 3637, 3912, 3972 |
| BtrI | CACGTC | 2 cut(s) | 472, 3330 |
| BtsI | GCAGTG | 2 cut(s) | 3273, 4288 |
| Cac8I | GCNNGC | 8 cut(s) | 1224, 1761, 2841, 2845, 2883, 2970, 3192, 3309 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1766 |
| CciI | TCATGA | 2 cut(s) | 558, 1117 |
| CfoI | GCGC | 4 cut(s) | 42, 1257, 2940, 3054 |
| Cfr10I | RCCGGY | 2 cut(s) | 94, 197 |
| CseI | GACGC | 2 cut(s) | 1159, 3848 |
| CsiI | ACCWGGT | 1 cut(s) | 2698 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2626, 2661, 2670, 2705 |
| DraI | TTTAAA | 2 cut(s) | 1198, 2185 |
| EaeI | YGGCCR | 2 cut(s) | 2313, 3910 |
| Eam1104I | CTCTTC | 6 cut(s) | 511, 798, 1440, 2484, 3237, 4641 |
| EarI | CTCTTC | 6 cut(s) | 511, 798, 1440, 2484, 3237, 4641 |
| Ecl136II | GAGCTC | 1 cut(s) | 129 |
| Eco130I | CCWWGG | 6 cut(s) | 225, 726, 828, 1349, 2169, 3800 |
| Eco147I | AGGCCT | 1 cut(s) | 988 |
| Eco24I | GRGCYC | 1 cut(s) | 131 |
| Eco31I | GGTCTC | 3 cut(s) | 3675, 4121, 4186 |
| Eco32I | GATATC | 2 cut(s) | 3888, 4413 |
| Eco47I | GGWCC | 7 cut(s) | 157, 189, 229, 2588, 2693, 3562, 4262 |
| Eco53kI | GAGCTC | 1 cut(s) | 129 |
| Eco57I | CTGAAG | 5 cut(s) | 1314, 3287, 3350, 4148, 4172 |
| Eco88I | CYCGRG | 3 cut(s) | 124, 2990, 4553 |
| Eco91I | GGTNACC | 1 cut(s) | 4061 |
| EcoICRI | GAGCTC | 1 cut(s) | 129 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2583 |
| EcoO109I | RGGNCCY | 2 cut(s) | 2588, 3971 |
| EcoO65I | GGTNACC | 1 cut(s) | 4061 |
| EcoRI | GAATTC | 1 cut(s) | 2530 |
| EcoRII | CCWGG | 9 cut(s) | 810, 2302, 2482, 2584, 2671, 2698, 2793, 3621, 3632 |
| EcoRV | GATATC | 2 cut(s) | 3888, 4413 |
| EcoT14I | CCWWGG | 6 cut(s) | 225, 726, 828, 1349, 2169, 3800 |
| EcoT22I | ATGCAT | 2 cut(s) | 4272, 4381 |
| EcoT38I | GRGCYC | 1 cut(s) | 131 |
| ErhI | CCWWGG | 6 cut(s) | 225, 726, 828, 1349, 2169, 3800 |
| Esp3I | CGTCTC | 1 cut(s) | 1592 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 209, 241, 2416, 2448, 3119, 3151, 3191, 3223 |
| FaqI | GGGAC | 4 cut(s) | 170, 1138, 2152, 4588 |
| FauI | CCCGC | 2 cut(s) | 147, 3183 |
| FauNDI | CATATG | 2 cut(s) | 649, 1600 |
| FbaI | TGATCA | 5 cut(s) | 690, 865, 1114, 2377, 3502 |
| FblI | GTMKAC | 3 cut(s) | 1077, 3045, 3862 |
| FriOI | GRGCYC | 1 cut(s) | 131 |
| FspBI | CTAG | 3 cut(s) | 551, 1514, 2882 |
| GlaI | GCGC | 4 cut(s) | 41, 1256, 2939, 3053 |
| GsaI | CCCAGC | 3 cut(s) | 3058, 3981, 4483 |
| GsuI | CTGGAG | 8 cut(s) | 833, 911, 1070, 1521, 2966, 3434, 3682, 4562 |
| HaeII | RGCGCY | 2 cut(s) | 43, 2941 |
| HaeIII | GGCC | 8 cut(s) | 104, 355, 988, 2315, 2520, 3637, 3912, 3972 |
| HapII | CCGG | 8 cut(s) | 62, 84, 95, 111, 198, 368, 463, 4416 |
| HgaI | GACGC | 2 cut(s) | 1159, 3848 |
| HhaI | GCGC | 4 cut(s) | 42, 1257, 2940, 3054 |
| Hin6I | GCGC | 4 cut(s) | 40, 1255, 2938, 3052 |
| HinP1I | GCGC | 4 cut(s) | 40, 1255, 2938, 3052 |
| HincII | GTYRAC | 1 cut(s) | 1078 |
| HindII | GTYRAC | 1 cut(s) | 1078 |
| HindIII | AAGCTT | 1 cut(s) | 3917 |
| HpaII | CCGG | 8 cut(s) | 62, 84, 95, 111, 198, 368, 463, 4416 |
| Hpy166II | GTNNAC | 8 cut(s) | 13, 1078, 2696, 3046, 3082, 3273, 3333, 3863 |
| Hpy8I | GTNNAC | 8 cut(s) | 13, 1078, 2696, 3046, 3082, 3273, 3333, 3863 |
| HpyCH4IV | ACGT | 7 cut(s) | 380, 390, 471, 614, 3329, 3834, 4248 |
| HpySE526I | ACGT | 7 cut(s) | 380, 390, 471, 614, 3329, 3834, 4248 |
| HspAI | GCGC | 4 cut(s) | 40, 1255, 2938, 3052 |
| KpnI | GGTACC | 1 cut(s) | 3874 |
| Ksp22I | TGATCA | 5 cut(s) | 690, 865, 1114, 2377, 3502 |
| LguI | GCTCTTC | 2 cut(s) | 1440, 2484 |
| LmnI | GCTCC | 9 cut(s) | 667, 892, 1089, 2648, 3058, 3453, 3796, 3958, 4369 |
| LweI | GCATC | 8 cut(s) | 895, 1645, 2335, 3498, 3694, 4279, 4366, 4507 |
| MabI | ACCWGGT | 1 cut(s) | 2698 |
| MaeI | CTAG | 3 cut(s) | 551, 1514, 2882 |
| MaeII | ACGT | 7 cut(s) | 380, 390, 471, 614, 3329, 3834, 4248 |
| MfeI | CAATTG | 2 cut(s) | 1070, 1245 |
| MflI | RGATCY | 4 cut(s) | 249, 2209, 2975, 3673 |
| MhlI | GDGCHC | 8 cut(s) | 131, 390, 1036, 3335, 3412, 3955, 4108, 4465 |
| MlsI | TGGCCA | 2 cut(s) | 2315, 3912 |
| MluNI | TGGCCA | 2 cut(s) | 2315, 3912 |
| MlyI | GAGTC | 4 cut(s) | 2670, 3179, 3794, 4553 |
| MmeI | TCCRAC | 4 cut(s) | 123, 2626, 3165, 4201 |
| Mox20I | TGGCCA | 2 cut(s) | 2315, 3912 |
| Mph1103I | ATGCAT | 2 cut(s) | 4272, 4381 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3359 |
| MscI | TGGCCA | 2 cut(s) | 2315, 3912 |
| MslI | CAYNNNNRTG | 9 cut(s) | 900, 1029, 2094, 2153, 2930, 3440, 4068, 4511, 4566 |
| Msp20I | TGGCCA | 2 cut(s) | 2315, 3912 |
| MspA1I | CMGCKG | 4 cut(s) | 154, 179, 1763, 2723 |
| MspCI | CTTAAG | 1 cut(s) | 3218 |
| MspI | CCGG | 8 cut(s) | 62, 84, 95, 111, 198, 368, 463, 4416 |
| MunI | CAATTG | 2 cut(s) | 1070, 1245 |
| Mva1269I | GAATGC | 3 cut(s) | 1834, 3539, 3597 |
| MvaI | CCWGG | 9 cut(s) | 812, 2304, 2484, 2586, 2673, 2700, 2795, 3623, 3634 |
| MvnI | CGCG | 2 cut(s) | 1170, 3052 |
| NciI | CCSGG | 5 cut(s) | 62, 84, 111, 368, 4417 |
| NdeI | CATATG | 2 cut(s) | 649, 1600 |
| NheI | GCTAGC | 1 cut(s) | 2881 |
| NlaIV | GGNNCC | 7 cut(s) | 158, 231, 1206, 1632, 2694, 3872, 4464 |
| NmeAIII | GCCGAG | 1 cut(s) | 79 |
| NmuCI | GTSAC | 5 cut(s) | 599, 1353, 2059, 4061, 4598 |
| NsiI | ATGCAT | 2 cut(s) | 4272, 4381 |
| NspI | RCATGY | 1 cut(s) | 899 |
| NspV | TTCGAA | 2 cut(s) | 2437, 2789 |
| OliI | CACNNNNGTG | 2 cut(s) | 1029, 4068 |
| PaeR7I | CTCGAG | 1 cut(s) | 4553 |
| PagI | TCATGA | 2 cut(s) | 558, 1117 |
| PasI | CCCWGGG | 1 cut(s) | 3622 |
| PceI | AGGCCT | 1 cut(s) | 988 |
| PciSI | GCTCTTC | 2 cut(s) | 1440, 2484 |
| PctI | GAATGC | 3 cut(s) | 1834, 3539, 3597 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3359 |
| PflFI | GACNNNGTC | 4 cut(s) | 605, 2862, 2910, 4113 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1745 |
| PfoI | TCCNGGA | 1 cut(s) | 810 |
| PleI | GAGTC | 4 cut(s) | 2670, 3178, 3793, 4552 |
| PpsI | GAGTC | 4 cut(s) | 2670, 3178, 3793, 4552 |
| PpuMI | RGGWCCY | 1 cut(s) | 2588 |
| PshAI | GACNNNNGTC | 2 cut(s) | 2586, 4260 |
| PshBI | ATTAAT | 4 cut(s) | 564, 1110, 1491, 1653 |
| PsiI | TTATAA | 1 cut(s) | 1803 |
| Psp124BI | GAGCTC | 1 cut(s) | 131 |
| Psp5II | RGGWCCY | 1 cut(s) | 2588 |
| Psp6I | CCWGG | 9 cut(s) | 810, 2302, 2482, 2584, 2671, 2698, 2793, 3621, 3632 |
| PspEI | GGTNACC | 1 cut(s) | 4061 |
| PspFI | CCCAGC | 3 cut(s) | 3054, 3977, 4479 |
| PspGI | CCWGG | 9 cut(s) | 810, 2302, 2482, 2584, 2671, 2698, 2793, 3621, 3632 |
| PspN4I | GGNNCC | 7 cut(s) | 158, 231, 1206, 1632, 2694, 3872, 4464 |
| PspPPI | RGGWCCY | 1 cut(s) | 2588 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1766 |
| PsuI | RGATCY | 4 cut(s) | 249, 2209, 2975, 3673 |
| PsyI | GACNNNGTC | 4 cut(s) | 605, 2862, 2910, 4113 |
| PvuII | CAGCTG | 2 cut(s) | 1763, 2723 |
| RseI | CAYNNNNRTG | 9 cut(s) | 900, 1029, 2094, 2153, 2930, 3440, 4068, 4511, 4566 |
| SacI | GAGCTC | 1 cut(s) | 131 |
| SalI | GTCGAC | 1 cut(s) | 1076 |
| SapI | GCTCTTC | 2 cut(s) | 1440, 2484 |
| ScaI | AGTACT | 1 cut(s) | 335 |
| SchI | GAGTC | 4 cut(s) | 2670, 3179, 3794, 4553 |
| SduI | GDGCHC | 8 cut(s) | 131, 390, 1036, 3335, 3412, 3955, 4108, 4465 |
| SexAI | ACCWGGT | 1 cut(s) | 2698 |
| SfaNI | GCATC | 8 cut(s) | 895, 1645, 2335, 3498, 3694, 4279, 4366, 4507 |
| Sfr274I | CTCGAG | 1 cut(s) | 4553 |
| SfuI | TTCGAA | 2 cut(s) | 2437, 2789 |
| SinI | GGWCC | 7 cut(s) | 157, 189, 229, 2588, 2693, 3562, 4262 |
| SlaI | CTCGAG | 1 cut(s) | 4553 |
| SmiMI | CAYNNNNRTG | 9 cut(s) | 900, 1029, 2094, 2153, 2930, 3440, 4068, 4511, 4566 |
| SmlI | CTYRAG | 7 cut(s) | 488, 787, 955, 982, 1027, 3218, 4553 |
| SmoI | CTYRAG | 7 cut(s) | 488, 787, 955, 982, 1027, 3218, 4553 |
| SseBI | AGGCCT | 1 cut(s) | 988 |
| SsiI | CCGC | 9 cut(s) | 154, 160, 177, 1628, 1634, 2935, 3190, 4132, 4596 |
| SspI | AATATT | 2 cut(s) | 1744, 2225 |
| SspMI | CTAG | 3 cut(s) | 551, 1514, 2882 |
| SstI | GAGCTC | 1 cut(s) | 131 |
| StuI | AGGCCT | 1 cut(s) | 988 |
| StyI | CCWWGG | 6 cut(s) | 225, 726, 828, 1349, 2169, 3800 |
| TaiI | ACGT | 7 cut(s) | 383, 393, 474, 617, 3332, 3837, 4251 |
| TatI | WGTACW | 5 cut(s) | 333, 1282, 3549, 3654, 4338 |
| TauI | GCSGC | 4 cut(s) | 179, 1636, 2938, 4134 |
| TseFI | GTSAC | 5 cut(s) | 599, 1353, 2059, 4061, 4598 |
| Tsp45I | GTSAC | 5 cut(s) | 599, 1353, 2059, 4061, 4598 |
| TspGWI | ACGGA | 4 cut(s) | 30, 275, 3578, 3917 |
| Tth111I | GACNNNGTC | 4 cut(s) | 605, 2862, 2910, 4113 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1745 |
| Vha464I | CTTAAG | 1 cut(s) | 3218 |
| VneI | GTGCAC | 1 cut(s) | 3331 |
| VpaK11BI | GGWCC | 7 cut(s) | 157, 189, 229, 2588, 2693, 3562, 4262 |
| VspI | ATTAAT | 4 cut(s) | 564, 1110, 1491, 1653 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2583 |
| XapI | RAATTY | 8 cut(s) | 938, 1570, 2530, 2730, 3414, 3724, 4001, 4405 |
| XceI | RCATGY | 1 cut(s) | 899 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 223 |
| XhoI | CTCGAG | 1 cut(s) | 4553 |
| XmiI | GTMKAC | 3 cut(s) | 1077, 3045, 3862 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3359 |
| XspI | CTAG | 3 cut(s) | 551, 1514, 2882 |
| ZrmI | AGTACT | 1 cut(s) | 335 |
| Zsp2I | ATGCAT | 2 cut(s) | 4272, 4381 |