Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0008763

Physical Location & Seq

Genomic Coordinates Forward (+)

13646428 .. 13647738

Gene Structure 1311 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G086100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 678 bp

ATGGCCATTTCTAAAACCAACAACACAAACGCTTCAAACACATTGAGATCAATTTGGAATTCTAAAAGCTCAGCAAATCTTTGTACAAGCAGCTCAATCTCATCCTTCTTTTCTTCTTCAATTCAGAATATCGGAAAATCGAGTGTTATATCCATGGAGAGGCCAGAAGGATATCCACAAGTAGATGATGTTTCTACATGCATCGAGGCACCAAGCACAAGCACAAGCACATCGTTTTTGGGCACCAAGAACGATATGTCACTTCTTGAAAGCGGTCTACTTAGAAGAAATTTTAGTGACGTAGGTGAGAATTACTACAGGTTCCAATCAAAAGTTGGTAAGTCAGTTGATCCAAGGTTGCTAGCGTTGGTAGAATTCTTTAGGGAGCTCTATTTTCGAAGGTTGGAACTATTCAAGAAAATCTTTCCGGGTGGTCATGATGATAAGTTTCTTGAGGTGCCAAAGAAATTGGGTTTGATATTAGCCAAAGTGAAACCAGATCAAACCAAAGCGGTTCAGACTATGCAACGGAGTTTAAGCATTGGTTCACCGCGAGATTTCAAAGGATACGAATCGGAAATGAGGCTTGAACGATTCAAGGTCAGAACTATTGATGTAGATGATGGTGGTGTACAAGGTGGCCAGGGTAATGAAATTAAGTCCAACGGTTCTAAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

226

Amino Acids

25.01

Weight (kDa)

9.39

Isoelectric Point (pI)

34.74

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008763)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38790
fragaria_vesca	FvH4_7g05940
malus_domestica	MD07G1068400.v1.1
prunus_persica	Prupe.2G086100_v2.0.a1
pyrus_communis	pycom02g21230 pycom07g05240 pycom07g05260
rosa_chinensis	RchiOBHm_Chr1g0333141 RchiOBHm_Chr1g0333151
rosa_laevigata	RLG00000029622
rosa_multiflora	Rmu_sc0001009.1_g000002 Rmu_sc0001214.1_g000015 Rmu_sc0001214.1_g000027
rosa_roxburghii	Rroxscaffold_4G00317740
rosa_rugosa	Rorug01G0107800
rosa_samantha	Rh1AG130700 Rh1AG130800 Rh1BG099900 Rh1CG124500 Rh1DG136100 Rh1DG136200
rosa_wichuraiana	Rw0G011820 Rw0G011840

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	208, 242, 457
AccI	GTMKAC	1 cut(s)	277
AccII	CGCG	1 cut(s)	553
AciI	CCGC	3 cut(s)	273, 512, 551
AclWI	GGATC	1 cut(s)	344
AcoI	YGGCCR	2 cut(s)	3, 640
AcsI	RAATTY	3 cut(s)	58, 289, 374
AfaI	GTAC	2 cut(s)	85, 633
AfiI	CCNNNNNNNGG	1 cut(s)	159
AgsI	TTSAA	7 cut(s)	36, 120, 269, 415, 562, 590, 598
AjnI	CCWGG	1 cut(s)	642
AluBI	AGCT	3 cut(s)	69, 93, 388
AluI	AGCT	3 cut(s)	69, 93, 388
Alw21I	GWGCWC	1 cut(s)	390
AlwI	GGATC	1 cut(s)	344
AoxI	GGCC	3 cut(s)	3, 161, 640
ApeKI	GCWGC	1 cut(s)	90
ApoI	RAATTY	3 cut(s)	58, 289, 374
AsuC2I	CCSGG	1 cut(s)	429
AsuHPI	GGTGA	2 cut(s)	317, 540
AsuII	TTCGAA	1 cut(s)	397
AsuNHI	GCTAGC	1 cut(s)	361
BaeGI	GKGCMC	1 cut(s)	245
BalI	TGGCCA	2 cut(s)	5, 642
BanI	GGYRCC	3 cut(s)	208, 242, 457
BanII	GRGCYC	1 cut(s)	390
Bbv12I	GWGCWC	1 cut(s)	390
BbvI	GCAGC	1 cut(s)	102
BccI	CCATC	1 cut(s)	617
BciT130I	CCWGG	1 cut(s)	644
BciVI	GTATCC	1 cut(s)	560
BcnI	CCSGG	1 cut(s)	429
BfaI	CTAG	1 cut(s)	362
BfmI	CTRYAG	1 cut(s)	316
BfuI	GTATCC	1 cut(s)	560
BisI	GCNGC	1 cut(s)	91
BlpI	GCTNAGC	1 cut(s)	70
BlsI	GCNGC	1 cut(s)	92
Bme1390I	CCNGG	2 cut(s)	429, 644
BmiI	GGNNCC	4 cut(s)	210, 244, 323, 459
BmrFI	CCNGG	2 cut(s)	429, 644
BmsI	GCATC	1 cut(s)	210
BmtI	GCTAGC	1 cut(s)	365
Bpu1102I	GCTNAGC	1 cut(s)	70
Bpu14I	TTCGAA	1 cut(s)	397
BpuEI	CTTGAG	1 cut(s)	473
BpuMI	CCSGG	1 cut(s)	429
BsaBI	GATNNNNATC	1 cut(s)	571
BsaJI	CCNNGG	3 cut(s)	153, 353, 643
Bsc4I	CCNNNNNNNGG	1 cut(s)	159
Bse8I	GATNNNNATC	1 cut(s)	571
BseBI	CCWGG	1 cut(s)	644
BseDI	CCNNGG	3 cut(s)	153, 353, 643
BseGI	GGATG	1 cut(s)	101
BseJI	GATNNNNATC	1 cut(s)	571
BseLI	CCNNNNNNNGG	1 cut(s)	159
BseMII	CTCAG	1 cut(s)	84
BseSI	GKGCMC	1 cut(s)	245
BseXI	GCAGC	1 cut(s)	102
Bsh1236I	CGCG	1 cut(s)	553
BshFI	GGCC	3 cut(s)	5, 163, 642
BshNI	GGYRCC	3 cut(s)	208, 242, 457
BsiHKAI	GWGCWC	1 cut(s)	390
BsiSI	CCGG	1 cut(s)	428
BslI	CCNNNNNNNGG	1 cut(s)	159
BsnI	GGCC	3 cut(s)	5, 163, 642
Bsp119I	TTCGAA	1 cut(s)	397
Bsp1286I	GDGCHC	2 cut(s)	245, 390
Bsp1407I	TGTACA	2 cut(s)	83, 631
Bsp143I	GATC	3 cut(s)	47, 349, 499
Bsp1720I	GCTNAGC	1 cut(s)	70
Bsp19I	CCATGG	1 cut(s)	153
BspACI	CCGC	3 cut(s)	273, 512, 551
BspANI	GGCC	3 cut(s)	5, 163, 642
BspCNI	CTCAG	1 cut(s)	83
BspFNI	CGCG	1 cut(s)	553
BspHI	TCATGA	1 cut(s)	436
BspLI	GGNNCC	4 cut(s)	210, 244, 323, 459
BspOI	GCTAGC	1 cut(s)	365
BspPI	GGATC	1 cut(s)	344
BspT104I	TTCGAA	1 cut(s)	397
BspT107I	GGYRCC	3 cut(s)	208, 242, 457
BsrGI	TGTACA	2 cut(s)	83, 631
BssECI	CCNNGG	3 cut(s)	153, 353, 643
BssMI	GATC	3 cut(s)	47, 349, 499
BssT1I	CCWWGG	2 cut(s)	153, 353
Bst2UI	CCWGG	1 cut(s)	644
Bst4CI	ACNGT	1 cut(s)	668
BstAUI	TGTACA	2 cut(s)	83, 631
BstBI	TTCGAA	1 cut(s)	397
BstC8I	GCNNGC	1 cut(s)	363
BstDEI	CTNAG	2 cut(s)	70, 281
BstDSI	CCRYGG	1 cut(s)	153
BstF5I	GGATG	1 cut(s)	101
BstFNI	CGCG	1 cut(s)	553
BstKTI	GATC	3 cut(s)	50, 352, 502
BstMBI	GATC	3 cut(s)	47, 349, 499
BstNI	CCWGG	1 cut(s)	644
BstNSI	RCATGY	1 cut(s)	201
BstSCI	CCNGG	2 cut(s)	427, 642
BstSFI	CTRYAG	1 cut(s)	316
BstSLI	GKGCMC	1 cut(s)	245
BstUI	CGCG	1 cut(s)	553
BstV1I	GCAGC	1 cut(s)	102
BsuI	GTATCC	1 cut(s)	560
BsuRI	GGCC	3 cut(s)	5, 163, 642
BtgI	CCRYGG	1 cut(s)	153
BtsCI	GGATG	1 cut(s)	101
Cac8I	GCNNGC	1 cut(s)	363
CciI	TCATGA	1 cut(s)	436
Csp6I	GTAC	2 cut(s)	84, 632
CviAII	CATG	3 cut(s)	154, 198, 437
CviJI	RGCY	8 cut(s)	5, 69, 93, 163, 388, 485, 586, 642
CviKI_1	RGCY	8 cut(s)	5, 69, 93, 163, 388, 485, 586, 642
CviQI	GTAC	2 cut(s)	84, 632
DdeI	CTNAG	2 cut(s)	70, 281
DpnI	GATC	3 cut(s)	49, 351, 501
DpnII	GATC	3 cut(s)	47, 349, 499
EaeI	YGGCCR	2 cut(s)	3, 640
Ecl136II	GAGCTC	1 cut(s)	388
Eco130I	CCWWGG	2 cut(s)	153, 353
Eco24I	GRGCYC	1 cut(s)	390
Eco32I	GATATC	1 cut(s)	173
Eco53kI	GAGCTC	1 cut(s)	388
EcoICRI	GAGCTC	1 cut(s)	388
EcoRI	GAATTC	2 cut(s)	58, 374
EcoRII	CCWGG	1 cut(s)	642
EcoRV	GATATC	1 cut(s)	173
EcoT14I	CCWWGG	2 cut(s)	153, 353
EcoT22I	ATGCAT	1 cut(s)	203
EcoT38I	GRGCYC	1 cut(s)	390
ErhI	CCWWGG	2 cut(s)	153, 353
FaeI	CATG	3 cut(s)	157, 201, 440
FaiI	YATR	6 cut(s)	149, 155, 199, 257, 438, 524
FalI	AAGNNNNNCTT	2 cut(s)	407, 439
FatI	CATG	3 cut(s)	153, 197, 436
FblI	GTMKAC	1 cut(s)	277
Fnu4HI	GCNGC	1 cut(s)	91
FokI	GGATG	1 cut(s)	88
FriOI	GRGCYC	1 cut(s)	390
Fsp4HI	GCNGC	1 cut(s)	91
FspBI	CTAG	1 cut(s)	362
GluI	GCNGC	1 cut(s)	91
HaeIII	GGCC	3 cut(s)	5, 163, 642
HapII	CCGG	1 cut(s)	428
Hin1II	CATG	3 cut(s)	157, 201, 440
HinfI	GANTC	2 cut(s)	572, 594
HpaII	CCGG	1 cut(s)	428
HphI	GGTGA	2 cut(s)	317, 540
Hpy166II	GTNNAC	3 cut(s)	278, 548, 632
Hpy188I	TCNGA	5 cut(s)	126, 134, 519, 577, 605
Hpy188III	TCNNGA	4 cut(s)	266, 415, 437, 452
Hpy8I	GTNNAC	3 cut(s)	278, 548, 632
HpyAV	CCTTC	3 cut(s)	115, 161, 393
HpyCH4III	ACNGT	1 cut(s)	668
HpyCH4IV	ACGT	1 cut(s)	300
HpyCH4V	TGCA	2 cut(s)	201, 526
HpyF3I	CTNAG	2 cut(s)	70, 281
HpySE526I	ACGT	1 cut(s)	300
Hsp92II	CATG	3 cut(s)	157, 201, 440
Kzo9I	GATC	3 cut(s)	47, 349, 499
LmnI	GCTCC	1 cut(s)	385
LpnPI	CCDG	6 cut(s)	177, 304, 441, 510, 629, 656
Lsp1109I	GCAGC	1 cut(s)	102
LweI	GCATC	1 cut(s)	210
MaeI	CTAG	1 cut(s)	362
MaeII	ACGT	1 cut(s)	300
MaeIII	GTNAC	2 cut(s)	258, 296
MalI	GATC	3 cut(s)	49, 351, 501
MboI	GATC	3 cut(s)	47, 349, 499
MboII	GAAGA	3 cut(s)	105, 108, 297
MhlI	GDGCHC	2 cut(s)	245, 390
MlsI	TGGCCA	2 cut(s)	5, 642
MluCI	AATT	8 cut(s)	51, 58, 120, 289, 310, 374, 467, 654
MluNI	TGGCCA	2 cut(s)	5, 642
MmeI	TCCRAC	1 cut(s)	384
MnlI	CCTC	4 cut(s)	153, 199, 448, 576
Mox20I	TGGCCA	2 cut(s)	5, 642
Mph1103I	ATGCAT	1 cut(s)	203
MscI	TGGCCA	2 cut(s)	5, 642
MseI	TTAA	2 cut(s)	536, 657
Msp20I	TGGCCA	2 cut(s)	5, 642
MspI	CCGG	1 cut(s)	428
MspR9I	CCNGG	2 cut(s)	429, 644
MvaI	CCWGG	1 cut(s)	644
MvnI	CGCG	1 cut(s)	553
NciI	CCSGG	1 cut(s)	429
NcoI	CCATGG	1 cut(s)	153
NdeII	GATC	3 cut(s)	47, 349, 499
NheI	GCTAGC	1 cut(s)	361
NlaIII	CATG	3 cut(s)	157, 201, 440
NlaIV	GGNNCC	4 cut(s)	210, 244, 323, 459
NmuCI	GTSAC	2 cut(s)	258, 296
NsiI	ATGCAT	1 cut(s)	203
NspI	RCATGY	1 cut(s)	201
NspV	TTCGAA	1 cut(s)	397
PagI	TCATGA	1 cut(s)	436
PfeI	GAWTC	2 cut(s)	572, 594
PkrI	GCNGC	1 cut(s)	92
Psp124BI	GAGCTC	1 cut(s)	390
Psp6I	CCWGG	1 cut(s)	642
PspGI	CCWGG	1 cut(s)	642
PspN4I	GGNNCC	4 cut(s)	210, 244, 323, 459
RsaI	GTAC	2 cut(s)	85, 633
RsaNI	GTAC	2 cut(s)	84, 632
SacI	GAGCTC	1 cut(s)	390
SaqAI	TTAA	2 cut(s)	536, 657
SatI	GCNGC	1 cut(s)	91
Sau3AI	GATC	3 cut(s)	47, 349, 499
ScrFI	CCNGG	2 cut(s)	429, 644
SduI	GDGCHC	2 cut(s)	245, 390
SfaNI	GCATC	1 cut(s)	210
SfcI	CTRYAG	1 cut(s)	316
SfuI	TTCGAA	1 cut(s)	397
SmlI	CTYRAG	1 cut(s)	452
SmoI	CTYRAG	1 cut(s)	452
Sse9I	AATT	8 cut(s)	51, 58, 120, 289, 310, 374, 467, 654
SsiI	CCGC	3 cut(s)	273, 512, 551
SspMI	CTAG	1 cut(s)	362
SstI	GAGCTC	1 cut(s)	390
StyD4I	CCNGG	2 cut(s)	427, 642
StyI	CCWWGG	2 cut(s)	153, 353
TaaI	ACNGT	1 cut(s)	668
TaiI	ACGT	1 cut(s)	303
TaqI	TCGA	3 cut(s)	140, 204, 397
TasI	AATT	8 cut(s)	51, 58, 120, 289, 310, 374, 467, 654
TatI	WGTACW	2 cut(s)	83, 631
TfiI	GAWTC	2 cut(s)	572, 594
Tru1I	TTAA	2 cut(s)	536, 657
Tru9I	TTAA	2 cut(s)	536, 657
TseFI	GTSAC	2 cut(s)	258, 296
TseI	GCWGC	1 cut(s)	90
Tsp45I	GTSAC	2 cut(s)	258, 296
TspDTI	ATGAA	1 cut(s)	666
TspGWI	ACGGA	1 cut(s)	544
XapI	RAATTY	3 cut(s)	58, 289, 374
XceI	RCATGY	1 cut(s)	201
XcmI	CCANNNNNNNNNTGG	1 cut(s)	332
XmiI	GTMKAC	1 cut(s)	277
XspI	CTAG	1 cut(s)	362
Zsp2I	ATGCAT	1 cut(s)	203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.