Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G03580 |
| fragaria_vesca | FvH4_7g07570 |
| malus_domestica | MD02G1235200.v1.1 MD02G1235800.v1.1 |
| prunus_persica | Prupe.2G102800_v2.0.a1 Prupe.2G102800_v2.0.a1 |
| pyrus_communis | pycom02g20250 |
| rosa_chinensis | RchiOBHm_Chr1g0339001 RchiOBHm_Chr1g0343101 |
| rosa_laevigata | RLG00000029204 RLG00000029208 |
| rosa_multiflora | Rmu_sc0017585.1_g000006 |
| rosa_roxburghii | Rroxscaffold_4G00313330 |
| rosa_rugosa | Rorug01G0144200.1 |
| rosa_samantha | Rh1AG160800 Rh1BG127800 Rh1CG150300 Rh1DG164000 |
| rosa_wichuraiana | Rw1G013420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 816 |
| AccI | GTMKAC | 1 cut(s) | 353 |
| AccII | CGCG | 1 cut(s) | 680 |
| AciI | CCGC | 5 cut(s) | 517, 678, 684, 1556, 2103 |
| AclWI | GGATC | 8 cut(s) | 1264, 1312, 1513, 1615, 1973, 2083, 2223, 2261 |
| AcoI | YGGCCR | 2 cut(s) | 307, 1557 |
| AcsI | RAATTY | 7 cut(s) | 256, 500, 612, 794, 938, 1102, 1162 |
| AcvI | CACGTG | 1 cut(s) | 2126 |
| AdeI | CACNNNGTG | 1 cut(s) | 2006 |
| AfaI | GTAC | 6 cut(s) | 37, 485, 788, 881, 1088, 1722 |
| AfeI | AGCGCT | 1 cut(s) | 273 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 252, 384, 403, 683, 1222 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1996 |
| AhlI | ACTAGT | 1 cut(s) | 1723 |
| AjnI | CCWGG | 3 cut(s) | 396, 1917, 2269 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 426, 458 |
| Alw26I | GTCTC | 2 cut(s) | 186, 556 |
| AlwI | GGATC | 8 cut(s) | 1264, 1312, 1513, 1615, 1973, 2083, 2223, 2261 |
| Aor51HI | AGCGCT | 1 cut(s) | 273 |
| AoxI | GGCC | 3 cut(s) | 307, 1557, 1915 |
| ApeKI | GCWGC | 3 cut(s) | 1598, 2120, 2198 |
| ApoI | RAATTY | 7 cut(s) | 256, 500, 612, 794, 938, 1102, 1162 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1750, 1782 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 615 |
| AspLEI | GCGC | 3 cut(s) | 274, 817, 986 |
| AspS9I | GGNCC | 1 cut(s) | 745 |
| AsuC2I | CCSGG | 1 cut(s) | 1145 |
| AsuHPI | GGTGA | 3 cut(s) | 509, 1237, 1808 |
| AsuNHI | GCTAGC | 1 cut(s) | 1291 |
| AvaII | GGWCC | 1 cut(s) | 745 |
| BalI | TGGCCA | 1 cut(s) | 309 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1931, 1963 |
| BauI | CACGAG | 1 cut(s) | 553 |
| BbrPI | CACGTG | 1 cut(s) | 2126 |
| BbsI | GAAGAC | 3 cut(s) | 69, 142, 2034 |
| BbvI | GCAGC | 3 cut(s) | 1585, 2107, 2210 |
| BccI | CCATC | 2 cut(s) | 629, 2278 |
| BceAI | ACGGC | 1 cut(s) | 530 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1370, 1404, 1958, 1992 |
| BciT130I | CCWGG | 3 cut(s) | 398, 1919, 2271 |
| BclI | TGATCA | 4 cut(s) | 369, 1129, 1170, 1855 |
| BcnI | CCSGG | 1 cut(s) | 1145 |
| BcoDI | GTCTC | 2 cut(s) | 186, 556 |
| BcuI | ACTAGT | 1 cut(s) | 1723 |
| BfaI | CTAG | 4 cut(s) | 489, 1292, 1695, 1724 |
| BfmI | CTRYAG | 1 cut(s) | 577 |
| BfoI | RGCGCY | 1 cut(s) | 275 |
| BisI | GCNGC | 4 cut(s) | 1557, 1599, 2121, 2199 |
| BlsI | GCNGC | 4 cut(s) | 1558, 1600, 2122, 2200 |
| Bme1390I | CCNGG | 4 cut(s) | 398, 1145, 1919, 2271 |
| Bme18I | GGWCC | 1 cut(s) | 745 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1996 |
| BmgT120I | GGNCC | 1 cut(s) | 745 |
| BmiI | GGNNCC | 1 cut(s) | 746 |
| BmrFI | CCNGG | 4 cut(s) | 398, 1145, 1919, 2271 |
| BmrI | ACTGGG | 2 cut(s) | 1349, 2175 |
| BmsI | GCATC | 6 cut(s) | 802, 1536, 1543, 1581, 1619, 2050 |
| BmtI | GCTAGC | 1 cut(s) | 1295 |
| BmuI | ACTGGG | 2 cut(s) | 1349, 2175 |
| BpiI | GAAGAC | 3 cut(s) | 69, 142, 2034 |
| BpuEI | CTTGAG | 1 cut(s) | 2004 |
| BpuMI | CCSGG | 1 cut(s) | 1145 |
| BsaAI | YACGTR | 2 cut(s) | 1264, 2126 |
| BsaI | GGTCTC | 1 cut(s) | 186 |
| BsaJI | CCNNGG | 2 cut(s) | 1624, 1961 |
| BsaWI | WCCGGW | 4 cut(s) | 90, 646, 1246, 1932 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 252, 384, 403, 683, 1222 |
| Bse1I | ACTGG | 3 cut(s) | 1344, 1664, 2170 |
| Bse3DI | GCAATG | 2 cut(s) | 142, 775 |
| BseBI | CCWGG | 3 cut(s) | 398, 1919, 2271 |
| BseDI | CCNNGG | 2 cut(s) | 1624, 1961 |
| BseGI | GGATG | 6 cut(s) | 525, 640, 1634, 1756, 1941, 2289 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 252, 384, 403, 683, 1222 |
| BseMI | GCAATG | 2 cut(s) | 142, 775 |
| BseMII | CTCAG | 7 cut(s) | 202, 225, 462, 899, 1301, 1537, 2145 |
| BseNI | ACTGG | 3 cut(s) | 1344, 1664, 2170 |
| BseXI | GCAGC | 3 cut(s) | 1585, 2107, 2210 |
| BseYI | CCCAGC | 1 cut(s) | 383 |
| BsgI | GTGCAG | 1 cut(s) | 2106 |
| Bsh1236I | CGCG | 1 cut(s) | 680 |
| BshFI | GGCC | 3 cut(s) | 309, 1559, 1917 |
| BsiSI | CCGG | 5 cut(s) | 91, 647, 1144, 1247, 1933 |
| BslFI | GGGAC | 5 cut(s) | 190, 860, 1010, 1017, 1801 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 252, 384, 403, 683, 1222 |
| BsmAI | GTCTC | 2 cut(s) | 186, 556 |
| BsmBI | CGTCTC | 1 cut(s) | 556 |
| BsmFI | GGGAC | 5 cut(s) | 190, 860, 1010, 1017, 1801 |
| BsmI | GAATGC | 3 cut(s) | 1145, 1482, 1678 |
| BsnI | GGCC | 3 cut(s) | 309, 1559, 1917 |
| Bso31I | GGTCTC | 1 cut(s) | 186 |
| Bsp19I | CCATGG | 1 cut(s) | 1624 |
| BspACI | CCGC | 5 cut(s) | 517, 678, 684, 1556, 2103 |
| BspANI | GGCC | 3 cut(s) | 309, 1559, 1917 |
| BspCNI | CTCAG | 7 cut(s) | 201, 224, 461, 898, 1300, 1536, 2144 |
| BspFNI | CGCG | 1 cut(s) | 680 |
| BspLI | GGNNCC | 1 cut(s) | 746 |
| BspOI | GCTAGC | 1 cut(s) | 1295 |
| BspPI | GGATC | 8 cut(s) | 1264, 1312, 1513, 1615, 1973, 2083, 2223, 2261 |
| BspTNI | GGTCTC | 1 cut(s) | 186 |
| BsrDI | GCAATG | 2 cut(s) | 142, 775 |
| BsrI | ACTGG | 3 cut(s) | 1344, 1664, 2170 |
| BssECI | CCNNGG | 2 cut(s) | 1624, 1961 |
| BssNAI | GTATAC | 1 cut(s) | 354 |
| BssSI | CACGAG | 1 cut(s) | 553 |
| BssT1I | CCWWGG | 2 cut(s) | 1624, 1961 |
| Bst1107I | GTATAC | 1 cut(s) | 354 |
| Bst2BI | CACGAG | 1 cut(s) | 553 |
| Bst2UI | CCWGG | 3 cut(s) | 398, 1919, 2271 |
| Bst4CI | ACNGT | 5 cut(s) | 581, 838, 868, 1325, 2004 |
| Bst6I | CTCTTC | 1 cut(s) | 1226 |
| BstBAI | YACGTR | 2 cut(s) | 1264, 2126 |
| BstC8I | GCNNGC | 7 cut(s) | 678, 682, 982, 1293, 1480, 2101, 2247 |
| BstDEI | CTNAG | 9 cut(s) | 188, 211, 448, 539, 885, 1287, 1523, 2084, 2131 |
| BstDSI | CCRYGG | 1 cut(s) | 1624 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1220 |
| BstF5I | GGATG | 6 cut(s) | 525, 640, 1634, 1756, 1941, 2289 |
| BstFNI | CGCG | 1 cut(s) | 680 |
| BstH2I | RGCGCY | 1 cut(s) | 275 |
| BstHHI | GCGC | 3 cut(s) | 274, 817, 986 |
| BstMAI | GTCTC | 2 cut(s) | 186, 556 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 1704, 1871, 2053, 2096, 2117, 2126 |
| BstNI | CCWGG | 3 cut(s) | 398, 1919, 2271 |
| BstNSI | RCATGY | 2 cut(s) | 1482, 2245 |
| BstSCI | CCNGG | 4 cut(s) | 396, 1143, 1917, 2269 |
| BstSFI | CTRYAG | 1 cut(s) | 577 |
| BstUI | CGCG | 1 cut(s) | 680 |
| BstV1I | GCAGC | 3 cut(s) | 1585, 2107, 2210 |
| BstV2I | GAAGAC | 3 cut(s) | 69, 142, 2034 |
| BstX2I | RGATCY | 3 cut(s) | 1620, 2075, 2266 |
| BstYI | RGATCY | 3 cut(s) | 1620, 2075, 2266 |
| BstZ17I | GTATAC | 1 cut(s) | 354 |
| BsuRI | GGCC | 3 cut(s) | 309, 1559, 1917 |
| BtgI | CCRYGG | 1 cut(s) | 1624 |
| BtsCI | GGATG | 6 cut(s) | 525, 640, 1634, 1756, 1941, 2289 |
| BtsI | GCAGTG | 1 cut(s) | 28 |
| BtsIMutI | CAGTG | 5 cut(s) | 28, 315, 470, 864, 1321 |
| Cac8I | GCNNGC | 7 cut(s) | 678, 682, 982, 1293, 1480, 2101, 2247 |
| CfoI | GCGC | 3 cut(s) | 274, 817, 986 |
| Cfr13I | GGNCC | 1 cut(s) | 745 |
| CseI | GACGC | 3 cut(s) | 136, 192, 1834 |
| Csp6I | GTAC | 6 cut(s) | 36, 484, 787, 880, 1087, 1721 |
| CviQI | GTAC | 6 cut(s) | 36, 484, 787, 880, 1087, 1721 |
| DdeI | CTNAG | 9 cut(s) | 188, 211, 448, 539, 885, 1287, 1523, 2084, 2131 |
| DraIII | CACNNNGTG | 1 cut(s) | 2006 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1996 |
| EaeI | YGGCCR | 2 cut(s) | 307, 1557 |
| Eam1104I | CTCTTC | 1 cut(s) | 1226 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1996 |
| EarI | CTCTTC | 1 cut(s) | 1226 |
| EciI | GGCGGA | 1 cut(s) | 532 |
| Eco130I | CCWWGG | 2 cut(s) | 1624, 1961 |
| Eco147I | AGGCCT | 1 cut(s) | 1917 |
| Eco31I | GGTCTC | 1 cut(s) | 186 |
| Eco32I | GATATC | 1 cut(s) | 547 |
| Eco47I | GGWCC | 1 cut(s) | 745 |
| Eco47III | AGCGCT | 1 cut(s) | 273 |
| Eco72I | CACGTG | 1 cut(s) | 2126 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1220 |
| EcoRI | GAATTC | 3 cut(s) | 256, 500, 1162 |
| EcoRII | CCWGG | 3 cut(s) | 396, 1917, 2269 |
| EcoRV | GATATC | 1 cut(s) | 547 |
| EcoT14I | CCWWGG | 2 cut(s) | 1624, 1961 |
| EcoT22I | ATGCAT | 2 cut(s) | 1484, 1634 |
| ErhI | CCWWGG | 2 cut(s) | 1624, 1961 |
| Esp3I | CGTCTC | 1 cut(s) | 556 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1027, 1059 |
| FaqI | GGGAC | 5 cut(s) | 190, 860, 1010, 1017, 1801 |
| FauI | CCCGC | 1 cut(s) | 685 |
| FauNDI | CATATG | 3 cut(s) | 1134, 1737, 1792 |
| FbaI | TGATCA | 4 cut(s) | 369, 1129, 1170, 1855 |
| FblI | GTMKAC | 1 cut(s) | 353 |
| Fnu4HI | GCNGC | 4 cut(s) | 1557, 1599, 2121, 2199 |
| FokI | GGATG | 6 cut(s) | 532, 647, 1641, 1763, 1948, 2296 |
| Fsp4HI | GCNGC | 4 cut(s) | 1557, 1599, 2121, 2199 |
| FspBI | CTAG | 4 cut(s) | 489, 1292, 1695, 1724 |
| FspI | TGCGCA | 1 cut(s) | 816 |
| GlaI | GCGC | 3 cut(s) | 273, 816, 985 |
| GluI | GCNGC | 4 cut(s) | 1557, 1599, 2121, 2199 |
| GsaI | CCCAGC | 1 cut(s) | 387 |
| HaeII | RGCGCY | 1 cut(s) | 275 |
| HaeIII | GGCC | 3 cut(s) | 309, 1559, 1917 |
| HapII | CCGG | 5 cut(s) | 91, 647, 1144, 1247, 1933 |
| HgaI | GACGC | 3 cut(s) | 136, 192, 1834 |
| HhaI | GCGC | 3 cut(s) | 274, 817, 986 |
| Hin6I | GCGC | 3 cut(s) | 272, 815, 984 |
| HinP1I | GCGC | 3 cut(s) | 272, 815, 984 |
| HincII | GTYRAC | 2 cut(s) | 1366, 1990 |
| HindII | GTYRAC | 2 cut(s) | 1366, 1990 |
| HindIII | AAGCTT | 4 cut(s) | 69, 225, 603, 688 |
| HpaII | CCGG | 5 cut(s) | 91, 647, 1144, 1247, 1933 |
| HphI | GGTGA | 3 cut(s) | 509, 1237, 1808 |
| Hpy166II | GTNNAC | 4 cut(s) | 354, 1021, 1366, 1990 |
| Hpy188I | TCNGA | 9 cut(s) | 191, 433, 451, 567, 714, 831, 1526, 1657, 2134 |
| Hpy188III | TCNNGA | 5 cut(s) | 1022, 1445, 1756, 1853, 2260 |
| Hpy8I | GTNNAC | 4 cut(s) | 354, 1021, 1366, 1990 |
| HpyAV | CCTTC | 7 cut(s) | 372, 1199, 1741, 1793, 1859, 1907, 2293 |
| HpyCH4III | ACNGT | 5 cut(s) | 581, 838, 868, 1325, 2004 |
| HpyCH4IV | ACGT | 2 cut(s) | 1263, 2125 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 1704, 1871, 2053, 2096, 2117, 2126 |
| HpyF3I | CTNAG | 9 cut(s) | 188, 211, 448, 539, 885, 1287, 1523, 2084, 2131 |
| HpySE526I | ACGT | 2 cut(s) | 1263, 2125 |
| HspAI | GCGC | 3 cut(s) | 272, 815, 984 |
| Ksp22I | TGATCA | 4 cut(s) | 369, 1129, 1170, 1855 |
| Lsp1109I | GCAGC | 3 cut(s) | 1585, 2107, 2210 |
| LweI | GCATC | 6 cut(s) | 802, 1536, 1543, 1581, 1619, 2050 |
| MaeI | CTAG | 4 cut(s) | 489, 1292, 1695, 1724 |
| MaeII | ACGT | 2 cut(s) | 1263, 2125 |
| MaeIII | GTNAC | 8 cut(s) | 124, 392, 642, 1235, 1259, 1453, 1756, 1998 |
| MfeI | CAATTG | 2 cut(s) | 198, 2147 |
| MflI | RGATCY | 3 cut(s) | 1620, 2075, 2266 |
| MlsI | TGGCCA | 1 cut(s) | 309 |
| MluNI | TGGCCA | 1 cut(s) | 309 |
| MlyI | GAGTC | 3 cut(s) | 842, 1244, 2250 |
| MmeI | TCCRAC | 1 cut(s) | 839 |
| Mox20I | TGGCCA | 1 cut(s) | 309 |
| Mph1103I | ATGCAT | 2 cut(s) | 1484, 1634 |
| MroXI | GAANNNNTTC | 1 cut(s) | 615 |
| MscI | TGGCCA | 1 cut(s) | 309 |
| MseI | TTAA | 6 cut(s) | 626, 806, 1188, 1211, 1221, 1511 |
| MslI | CAYNNNNRTG | 5 cut(s) | 320, 753, 1491, 1656, 1769 |
| Msp20I | TGGCCA | 1 cut(s) | 309 |
| MspI | CCGG | 5 cut(s) | 91, 647, 1144, 1247, 1933 |
| MspR9I | CCNGG | 4 cut(s) | 398, 1145, 1919, 2271 |
| MunI | CAATTG | 2 cut(s) | 198, 2147 |
| Mva1269I | GAATGC | 3 cut(s) | 1145, 1482, 1678 |
| MvaI | CCWGG | 3 cut(s) | 398, 1919, 2271 |
| MvnI | CGCG | 1 cut(s) | 680 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 1704, 1871, 2053, 2096, 2117, 2126 |
| NciI | CCSGG | 1 cut(s) | 1145 |
| NcoI | CCATGG | 1 cut(s) | 1624 |
| NdeI | CATATG | 3 cut(s) | 1134, 1737, 1792 |
| NheI | GCTAGC | 1 cut(s) | 1291 |
| NlaIV | GGNNCC | 1 cut(s) | 746 |
| NmuCI | GTSAC | 4 cut(s) | 124, 392, 1756, 1998 |
| NsbI | TGCGCA | 1 cut(s) | 816 |
| NsiI | ATGCAT | 2 cut(s) | 1484, 1634 |
| NspI | RCATGY | 2 cut(s) | 1482, 2245 |
| PaeI | GCATGC | 1 cut(s) | 1482 |
| PceI | AGGCCT | 1 cut(s) | 1917 |
| PctI | GAATGC | 3 cut(s) | 1145, 1482, 1678 |
| PdmI | GAANNNNTTC | 1 cut(s) | 615 |
| PfeI | GAWTC | 7 cut(s) | 650, 905, 1148, 1344, 1412, 2153, 2290 |
| PfoI | TCCNGGA | 1 cut(s) | 2269 |
| PkrI | GCNGC | 4 cut(s) | 1558, 1600, 2122, 2200 |
| PleI | GAGTC | 3 cut(s) | 842, 1244, 2250 |
| PmaCI | CACGTG | 1 cut(s) | 2126 |
| PmlI | CACGTG | 1 cut(s) | 2126 |
| PpsI | GAGTC | 3 cut(s) | 842, 1244, 2250 |
| Ppu21I | YACGTR | 2 cut(s) | 1264, 2126 |
| Psp6I | CCWGG | 3 cut(s) | 396, 1917, 2269 |
| PspCI | CACGTG | 1 cut(s) | 2126 |
| PspFI | CCCAGC | 1 cut(s) | 383 |
| PspGI | CCWGG | 3 cut(s) | 396, 1917, 2269 |
| PspN4I | GGNNCC | 1 cut(s) | 746 |
| PspPI | GGNCC | 1 cut(s) | 745 |
| PsuI | RGATCY | 3 cut(s) | 1620, 2075, 2266 |
| RsaI | GTAC | 6 cut(s) | 37, 485, 788, 881, 1088, 1722 |
| RsaNI | GTAC | 6 cut(s) | 36, 484, 787, 880, 1087, 1721 |
| RseI | CAYNNNNRTG | 5 cut(s) | 320, 753, 1491, 1656, 1769 |
| SaqAI | TTAA | 6 cut(s) | 626, 806, 1188, 1211, 1221, 1511 |
| SatI | GCNGC | 4 cut(s) | 1557, 1599, 2121, 2199 |
| Sau96I | GGNCC | 1 cut(s) | 745 |
| SchI | GAGTC | 3 cut(s) | 842, 1244, 2250 |
| ScrFI | CCNGG | 4 cut(s) | 398, 1145, 1919, 2271 |
| SfaNI | GCATC | 6 cut(s) | 802, 1536, 1543, 1581, 1619, 2050 |
| SfcI | CTRYAG | 1 cut(s) | 577 |
| SinI | GGWCC | 1 cut(s) | 745 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 320, 753, 1491, 1656, 1769 |
| SmlI | CTYRAG | 1 cut(s) | 2019 |
| SmoI | CTYRAG | 1 cut(s) | 2019 |
| SpeI | ACTAGT | 1 cut(s) | 1723 |
| SphI | GCATGC | 1 cut(s) | 1482 |
| SseBI | AGGCCT | 1 cut(s) | 1917 |
| SsiI | CCGC | 5 cut(s) | 517, 678, 684, 1556, 2103 |
| SspMI | CTAG | 4 cut(s) | 489, 1292, 1695, 1724 |
| StuI | AGGCCT | 1 cut(s) | 1917 |
| StyD4I | CCNGG | 4 cut(s) | 396, 1143, 1917, 2269 |
| StyI | CCWWGG | 2 cut(s) | 1624, 1961 |
| TaaI | ACNGT | 5 cut(s) | 581, 838, 868, 1325, 2004 |
| TaiI | ACGT | 2 cut(s) | 1266, 2128 |
| TaqI | TCGA | 5 cut(s) | 1347, 1769, 1968, 2095, 2261 |
| TatI | WGTACW | 1 cut(s) | 786 |
| TauI | GCSGC | 1 cut(s) | 1559 |
| TfiI | GAWTC | 7 cut(s) | 650, 905, 1148, 1344, 1412, 2153, 2290 |
| Tru1I | TTAA | 6 cut(s) | 626, 806, 1188, 1211, 1221, 1511 |
| Tru9I | TTAA | 6 cut(s) | 626, 806, 1188, 1211, 1221, 1511 |
| TscAI | CASTG | 5 cut(s) | 28, 322, 477, 871, 1328 |
| TseFI | GTSAC | 4 cut(s) | 124, 392, 1756, 1998 |
| TseI | GCWGC | 3 cut(s) | 1598, 2120, 2198 |
| Tsp45I | GTSAC | 4 cut(s) | 124, 392, 1756, 1998 |
| TspGWI | ACGGA | 3 cut(s) | 45, 1708, 2248 |
| TspRI | CASTG | 5 cut(s) | 28, 322, 477, 871, 1328 |
| VpaK11BI | GGWCC | 1 cut(s) | 745 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1220 |
| XapI | RAATTY | 7 cut(s) | 256, 500, 612, 794, 938, 1102, 1162 |
| XceI | RCATGY | 2 cut(s) | 1482, 2245 |
| XmiI | GTMKAC | 1 cut(s) | 353 |
| XmnI | GAANNNNTTC | 1 cut(s) | 615 |
| XspI | CTAG | 4 cut(s) | 489, 1292, 1695, 1724 |
| Zsp2I | ATGCAT | 2 cut(s) | 1484, 1634 |