Gene Detail - Rorug01G0144200

Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0012289

Physical Location & Seq

Genomic Coordinates Forward (+)

22355694 .. 22355806

Gene Structure 113 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 22 bp

Sequence not available

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Genomic Context

Gene Family Tree

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Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0012289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03580
fragaria_vesca	FvH4_7g07570
malus_domestica	MD02G1235200.v1.1 MD02G1235800.v1.1
prunus_persica	Prupe.2G102800_v2.0.a1 Prupe.2G102800_v2.0.a1
pyrus_communis	pycom02g20250
rosa_chinensis	RchiOBHm_Chr1g0339001 RchiOBHm_Chr1g0343101
rosa_laevigata	RLG00000029204 RLG00000029208
rosa_multiflora	Rmu_sc0017585.1_g000006
rosa_roxburghii	Rroxscaffold_4G00313330
rosa_rugosa	Rorug01G0144200.1
rosa_samantha	Rh1AG160800 Rh1BG127800 Rh1CG150300 Rh1DG164000
rosa_wichuraiana	Rw1G013420

Restriction Enzyme Sites

1 / 10

No common restriction sites found or sequence not available.