RchiOBHm_Chr1g0339001

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0012289
Physical Location & Seq
Forward (+)
30267934 .. 30271584
3651 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56597

Sequence Viewer

Length: 2265 bp
ATGAGAACTGCGAACGTAAGCAGCTTCTATGGTCTTAGCAAACAAGTTGTCTATTCAATGTTCTCAAAATCTCTGTCTTCCAGTAAAACTAGAAGAGAAGTACACAAACTCAACTCACTGATCATCACTTTAGGATTACACCAATCTGTGTTGTTCTCTGGCAAGCTCATAAGCAAGTATGCCCAACTCAGATACCCCATTTCTTCCCTCTCAGTTTTCCACCAAGTTTGGCCCAAACACAATCCCTATCTATGGAACTCAATCATCAGAGCACTTATCCATAATGGGCTTCACTCAAAAGCTCTTGACCATTACAATGAAATGCATGGAATGAATGTTCAGCCTGATAGGTATACCTTTCCTTCAGTGATCAATGCCTGTGCTGGGTTGTGTGATCTGGAAATGGGTATGGTTGTGCATCACCGTATTCTGGAGAAGGGTTTCGGCTCAGACTTGTATATATGTAATGCATTGATAGATATGTATGCTAGATTTGGTGAACTTGGTAATGCACGCCATGTGTTCGATGAAATGCCTGAAAGAGATATTGTGTCGTGGAATAGTCTGATTTCGGGGTACGGTTCAAATGCATATTGGGAGGAAGCTTTGGAAATGTTTCGTAGATTAAGAATTGATGGGTTGTTACCGGATTGTTTTTCGATATCTAGTGTTCTGCCTGCGTGTGGAGGCTTGGTTGATGTTAAGGAGGGTCGGTTAGTTCATGCTATGGTTGAAAAGATTGGAGTGCATGCAGATGTTTTAGTAAGTAATGGGCTTCTCTCAATGTACTTCAAATTTGTTAGGGACTCTGTTAGTTGGAACACTGTGATTTGTGGGTACTCGCAGTTGGGATTATTTGAAGAGGCAATCAATTTGTTCAGGGTAATGATAAAGGAATTCACACCTGATTTGCTAACAATCACATCCGTGCTCCGTGCTTGTTCACATTTACAAGACTTGGAACTTGCAAAATATGTTCATGGCTACATGAAAAGAAGTGGTTTTGAATTTGATACAATGGCGAACAATGTACTTATTGATACGTATGCAAAATGTGGAAGTCTATTAGCTTCACGGGAAGTATTTGACTACATGGAATGCAGAGATTCTGTGTCATGGAATTCTATGATCAATGGTTACTTTCTTAATGGTTGTTTTGATGAAGGGTTAAATCTTTTTAAGATGATGCGGAGTAATATGAAACCTGATTCTGTGAGTTGTGTGACAATTCTGTCTGTCTATACTCAAATCAGACATGTGGACCAGGGGAAAATGATCCACTGTGATATAGTGAAGCTGGGATTTGATTCAGATGTTATTGTCAACAATGTTCTTGTCGATTTGTATGCTAAATGTGGCAAAATACAAGATGCACTAAAAGTATTTGACAGCATGACAGCACGTGATGTTGTAACATGGAATAGCATAATTTCTGCATGCACCCATAATGAAGACTGTAGTTTAGGTTTTAAAATGATTCTTAGAATGAGAAATGAGGGAGTGATGCCTGACACAGCAACAATGTTAGGCATCTTACCAGTGTGTTCCTTACTTGCTGCCAAGCAAAAAGGACAAGAGATCCATGGCTGCATTTTCAGGTTAGGATTTCATTCAGATGTTCCAGTTGGGAATGCACTAATCGAAATGTACTCTAGTTGTGGTAGCTTGGAAAGCTCCATACGAATATTTGAGCAAATGTACATAAAGGATGTGGTGACATGGACTTCGTTGATCTCTGCATATGGGACATATGGTGAAGGTGAGAAAGCATTGAGAGCATTTGAAGAAATGGAAGCAGCTGGTGTTCTTCCTGATCATCTAGCTTTTCTAGCCGTCATATATGCTTGTAGCCATTCAGGTTTGGTAGAAGACGGTCTGGCTTACTTTGACCGAATGAAGAAACACTACAAAGTTGAGCCTAGGATGGAGCACTATGCTTGTGTAGTTGACCTTCTATCCCGCTCTGGGCTATTAGCTCAAGCTGAGGACTTTATCCATACAATGCCGATGAAGGCTGATGCAAGTATATGGGGATCTTTACTTAGTGCTTGCCGAGAAAATGGAGAAGAAAAGATAGCTGCACATGTCTCAGAGCAGATTGTTCAATTGAATTCTTATGACACGGGGTATCATGTTTTGGTGTCGAATGTATATGCAGCTTTAGGGAAGTGGGATAAAGTGAGAACGATGAGGAAACACATGAAAGCTAAAGGACTCACAAAAGATCCTGGATTTAGCTGGATGGAGATTCAAAAGAAGGGCTGA

Protein Analysis

754

Amino Acids

84.81

Weight (kDa)

6.55

Isoelectric Point (pI)

40.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 83 - 128 7e-10 PPR repeat family
PPR_2 PF13041 181 - 228 1.6e-07 PPR repeat family
PPR PF01535 184 - 213 1e-06 PPR repeat
PPR_2 PF13041 269 - 315 1.1e-08 PPR repeat family
PPR PF01535 271 - 298 3.8e-07 PPR repeat
PPR_2 PF13041 369 - 412 3.1e-07 PPR repeat family
PPR PF01535 371 - 398 1.3e-07 PPR repeat
PPR_2 PF13041 468 - 508 2.8e-06 PPR repeat family
PPR_2 PF13041 569 - 617 4.2e-09 PPR repeat family
PPR PF01535 572 - 602 2.7e-06 PPR repeat
E_motif PF20431 691 - 749 2.8e-14 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012289)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G03580
fragaria_vesca FvH4_7g07570
malus_domestica MD02G1235200.v1.1 MD02G1235800.v1.1
prunus_persica Prupe.2G102800_v2.0.a1 Prupe.2G102800_v2.0.a1
pyrus_communis pycom02g20250
rosa_chinensis RchiOBHm_Chr1g0339001 RchiOBHm_Chr1g0343101
rosa_laevigata RLG00000029204 RLG00000029208
rosa_multiflora Rmu_sc0017585.1_g000006
rosa_roxburghii Rroxscaffold_4G00313330
rosa_rugosa Rorug01G0144200.1
rosa_samantha Rh1AG160800 Rh1BG127800 Rh1CG150300 Rh1DG164000
rosa_wichuraiana Rw1G013420

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1231
AccBSI CCGCTC 1 cut(s) 1962
AccI GTMKAC 1 cut(s) 353
AciI CCGC 2 cut(s) 1189, 1960
AclWI GGATC 4 cut(s) 1270, 1573, 2041, 2219
AcsI RAATTY 5 cut(s) 794, 896, 1007, 1120, 2110
AcuI CTGAAG 1 cut(s) 348
AcvI CACGTG 1 cut(s) 1403
AfaI GTAC 7 cut(s) 102, 578, 788, 839, 1032, 1649, 1700
AfiI CCNNNNNNNGG 5 cut(s) 252, 384, 430, 683, 1965
AflIII ACRYGT 2 cut(s) 1255, 2083
AjnI CCWGG 2 cut(s) 1263, 2227
AleI CACNNNNGTG 1 cut(s) 926
AloI GAACNNNNNNTCC 2 cut(s) 321, 353
Alw21I GWGCWC 3 cut(s) 274, 933, 1932
Alw26I GTCTC 1 cut(s) 2092
AlwI GGATC 4 cut(s) 1270, 1573, 2041, 2219
AoxI GGCC 1 cut(s) 230
ApeKI GCWGC 6 cut(s) 21, 1556, 1587, 1796, 2078, 2156
ApoI RAATTY 5 cut(s) 794, 896, 1007, 1120, 2110
ArsI GACNNNNNNTTYG 6 cut(s) 33, 59, 65, 91, 1708, 1740
Asp700I GAANNNNTTC 2 cut(s) 440, 615
AspA2I CCTAGG 1 cut(s) 1919
AspS9I GGNCC 2 cut(s) 231, 1261
AsuHPI GGTGA 5 cut(s) 413, 509, 1726, 1766, 1772
AvaII GGWCC 1 cut(s) 1261
AvrII CCTAGG 1 cut(s) 1919
BarI GAAGNNNNNNTAC 4 cut(s) 1889, 1921, 1935, 1967
BbrPI CACGTG 1 cut(s) 1403
BbsI GAAGAC 3 cut(s) 69, 1458, 1875
Bbv12I GWGCWC 3 cut(s) 274, 933, 1932
BbvCI CCTCAGC 1 cut(s) 1983
BbvI GCAGC 6 cut(s) 33, 1543, 1574, 1808, 2065, 2168
BccI CCATC 3 cut(s) 629, 1918, 2236
BceAI ACGGC 1 cut(s) 1817
BcgI CGANNNNNNTGC 2 cut(s) 1328, 1362
BciT130I CCWGG 2 cut(s) 1265, 2229
BclI TGATCA 4 cut(s) 120, 369, 1128, 1813
BcoDI GTCTC 1 cut(s) 2092
BfaI CTAG 7 cut(s) 90, 489, 666, 1653, 1820, 1829, 1920
BfmI CTRYAG 1 cut(s) 1456
BisI GCNGC 6 cut(s) 22, 1557, 1588, 1797, 2079, 2157
BlnI CCTAGG 1 cut(s) 1919
BlsI GCNGC 6 cut(s) 23, 1558, 1589, 1798, 2080, 2158
Bme1390I CCNGG 2 cut(s) 1265, 2229
Bme18I GGWCC 1 cut(s) 1261
BmgT120I GGNCC 2 cut(s) 231, 1261
BmrFI CCNGG 2 cut(s) 1265, 2229
BmsI GCATC 6 cut(s) 427, 1176, 1360, 1494, 1539, 2008
BpiI GAAGAC 3 cut(s) 69, 1458, 1875
BpmI CTGGAG 1 cut(s) 452
Bpu10I CCTNAGC 1 cut(s) 1983
BpuEI CTTGAG 1 cut(s) 1962
BsaAI YACGTR 2 cut(s) 1044, 1403
BsaJI CCNNGG 3 cut(s) 1264, 1582, 1919
BsaWI WCCGGW 1 cut(s) 646
BsaXI ACNNNNNCTCC 4 cut(s) 678, 698, 708, 728
Bsc4I CCNNNNNNNGG 5 cut(s) 252, 384, 430, 683, 1965
Bse1I ACTGG 3 cut(s) 81, 1538, 1622
BseBI CCWGG 2 cut(s) 1265, 2229
BseDI CCNNGG 3 cut(s) 1264, 1582, 1919
BseGI GGATG 4 cut(s) 923, 1714, 1929, 2247
BseLI CCNNNNNNNGG 5 cut(s) 252, 384, 430, 683, 1965
BseMII CTCAG 5 cut(s) 202, 225, 462, 1974, 2103
BseNI ACTGG 3 cut(s) 81, 1538, 1622
BseXI GCAGC 6 cut(s) 33, 1543, 1574, 1808, 2065, 2168
BseYI CCCAGC 2 cut(s) 383, 1297
BsgI GTGCAG 1 cut(s) 2064
BshFI GGCC 1 cut(s) 232
BsiHKAI GWGCWC 3 cut(s) 274, 933, 1932
BsiSI CCGG 1 cut(s) 647
BslFI GGGAC 2 cut(s) 818, 1759
BslI CCNNNNNNNGG 5 cut(s) 252, 384, 430, 683, 1965
BsmAI GTCTC 1 cut(s) 2092
BsmFI GGGAC 2 cut(s) 818, 1759
BsmI GAATGC 2 cut(s) 1103, 1636
BsnI GGCC 1 cut(s) 232
Bsp1286I GDGCHC 3 cut(s) 274, 933, 1932
Bsp1407I TGTACA 1 cut(s) 1698
Bsp19I CCATGG 1 cut(s) 1582
BspACI CCGC 2 cut(s) 1189, 1960
BspANI GGCC 1 cut(s) 232
BspCNI CTCAG 5 cut(s) 201, 224, 461, 1975, 2102
BspPI GGATC 4 cut(s) 1270, 1573, 2041, 2219
BsrBI CCGCTC 1 cut(s) 1962
BsrGI TGTACA 1 cut(s) 1698
BsrI ACTGG 3 cut(s) 81, 1538, 1622
BssECI CCNNGG 3 cut(s) 1264, 1582, 1919
BssNAI GTATAC 1 cut(s) 354
BssT1I CCWWGG 2 cut(s) 1582, 1919
Bst1107I GTATAC 1 cut(s) 354
Bst2UI CCWGG 2 cut(s) 1265, 2229
Bst4CI ACNGT 6 cut(s) 425, 581, 826, 1283, 1457, 1874
Bst6I CTCTTC 2 cut(s) 88, 855
BstAUI TGTACA 1 cut(s) 1698
BstBAI YACGTR 2 cut(s) 1044, 1403
BstC8I GCNNGC 6 cut(s) 164, 514, 678, 750, 1438, 2050
BstDEI CTNAG 8 cut(s) 35, 188, 211, 448, 1481, 1983, 2042, 2089
BstDSI CCRYGG 1 cut(s) 1582
BstF5I GGATG 4 cut(s) 923, 1714, 1929, 2247
BstMAI GTCTC 1 cut(s) 2092
BstMWI GCNNNNNNNGC 3 cut(s) 1671, 1775, 1829
BstNI CCWGG 2 cut(s) 1265, 2229
BstNSI RCATGY 4 cut(s) 752, 1259, 1440, 2087
BstSCI CCNGG 2 cut(s) 1263, 2227
BstSFI CTRYAG 1 cut(s) 1456
BstSNI TACGTA 1 cut(s) 1044
BstV1I GCAGC 6 cut(s) 33, 1543, 1574, 1808, 2065, 2168
BstV2I GAAGAC 3 cut(s) 69, 1458, 1875
BstX2I RGATCY 3 cut(s) 1578, 2033, 2224
BstYI RGATCY 3 cut(s) 1578, 2033, 2224
BstZ17I GTATAC 1 cut(s) 354
BsuRI GGCC 1 cut(s) 232
BtgI CCRYGG 1 cut(s) 1582
BtsCI GGATG 4 cut(s) 923, 1714, 1929, 2247
BtsIMutI CAGTG 5 cut(s) 116, 372, 822, 1279, 1545
Cac8I GCNNGC 6 cut(s) 164, 514, 678, 750, 1438, 2050
Cfr13I GGNCC 2 cut(s) 231, 1261
Csp6I GTAC 7 cut(s) 101, 577, 787, 838, 1031, 1648, 1699
CspCI CAANNNNNGTGG 2 cut(s) 209, 244
CviQI GTAC 7 cut(s) 101, 577, 787, 838, 1031, 1648, 1699
DdeI CTNAG 8 cut(s) 35, 188, 211, 448, 1481, 1983, 2042, 2089
DraI TTTAAA 1 cut(s) 1471
DrdI GACNNNNNNGTC 1 cut(s) 1231
DseDI GACNNNNNNGTC 1 cut(s) 1231
Eam1104I CTCTTC 2 cut(s) 88, 855
EarI CTCTTC 2 cut(s) 88, 855
Eco105I TACGTA 1 cut(s) 1044
Eco130I CCWWGG 2 cut(s) 1582, 1919
Eco32I GATATC 1 cut(s) 663
Eco47I GGWCC 1 cut(s) 1261
Eco57I CTGAAG 1 cut(s) 348
Eco72I CACGTG 1 cut(s) 1403
EcoRI GAATTC 3 cut(s) 896, 1120, 2110
EcoRII CCWGG 2 cut(s) 1263, 2227
EcoRV GATATC 1 cut(s) 663
EcoT14I CCWWGG 2 cut(s) 1582, 1919
EcoT22I ATGCAT 3 cut(s) 327, 472, 592
ErhI CCWWGG 2 cut(s) 1582, 1919
FaqI GGGAC 2 cut(s) 818, 1759
FauI CCCGC 1 cut(s) 1967
FauNDI CATATG 2 cut(s) 1741, 1750
FbaI TGATCA 4 cut(s) 120, 369, 1128, 1813
FblI GTMKAC 1 cut(s) 353
Fnu4HI GCNGC 6 cut(s) 22, 1557, 1588, 1797, 2079, 2157
FokI GGATG 4 cut(s) 910, 1721, 1936, 2254
Fsp4HI GCNGC 6 cut(s) 22, 1557, 1588, 1797, 2079, 2157
FspBI CTAG 7 cut(s) 90, 489, 666, 1653, 1820, 1829, 1920
GluI GCNGC 6 cut(s) 22, 1557, 1588, 1797, 2079, 2157
GsaI CCCAGC 2 cut(s) 387, 1301
GsuI CTGGAG 1 cut(s) 452
HaeIII GGCC 1 cut(s) 232
HapII CCGG 1 cut(s) 647
HincII GTYRAC 2 cut(s) 1324, 1948
HindII GTYRAC 2 cut(s) 1324, 1948
HindIII AAGCTT 1 cut(s) 603
HinfI GANTC 7 cut(s) 806, 1106, 1208, 1307, 1477, 2214, 2248
HpaII CCGG 1 cut(s) 647
HphI GGTGA 5 cut(s) 413, 509, 1726, 1766, 1772
Hpy166II GTNNAC 7 cut(s) 103, 354, 500, 944, 1261, 1324, 1948
Hpy188I TCNGA 8 cut(s) 191, 269, 451, 567, 1253, 1312, 1615, 2092
Hpy188III TCNNGA 4 cut(s) 305, 398, 431, 1811
Hpy8I GTNNAC 7 cut(s) 103, 354, 500, 944, 1261, 1324, 1948
HpyAV CCTTC 7 cut(s) 372, 430, 1157, 1751, 1961, 2005, 2251
HpyCH4III ACNGT 6 cut(s) 425, 581, 826, 1283, 1457, 1874
HpyCH4IV ACGT 3 cut(s) 15, 1043, 1402
HpyF10VI GCNNNNNNNGC 3 cut(s) 1671, 1775, 1829
HpyF3I CTNAG 8 cut(s) 35, 188, 211, 448, 1481, 1983, 2042, 2089
HpySE526I ACGT 3 cut(s) 15, 1043, 1402
Ksp22I TGATCA 4 cut(s) 120, 369, 1128, 1813
LmnI GCTCC 3 cut(s) 936, 1679, 1927
Lsp1109I GCAGC 6 cut(s) 33, 1543, 1574, 1808, 2065, 2168
LweI GCATC 6 cut(s) 427, 1176, 1360, 1494, 1539, 2008
MaeI CTAG 7 cut(s) 90, 489, 666, 1653, 1820, 1829, 1920
MaeII ACGT 3 cut(s) 15, 1043, 1402
MaeIII GTNAC 5 cut(s) 642, 1136, 1222, 1411, 1714
MbiI CCGCTC 1 cut(s) 1962
MfeI CAATTG 1 cut(s) 2105
MflI RGATCY 3 cut(s) 1578, 2033, 2224
MhlI GDGCHC 3 cut(s) 274, 933, 1932
MlyI GAGTC 2 cut(s) 800, 2208
MmeI TCCRAC 1 cut(s) 797
MnlI CCTC 8 cut(s) 218, 592, 680, 700, 856, 1489, 1978, 2184
Mph1103I ATGCAT 3 cut(s) 327, 472, 592
MroXI GAANNNNTTC 2 cut(s) 440, 615
MseI TTAA 6 cut(s) 626, 702, 1146, 1169, 1179, 1470
MslI CAYNNNNRTG 4 cut(s) 315, 753, 926, 1614
MspA1I CMGCKG 1 cut(s) 1799
MspI CCGG 1 cut(s) 647
MspR9I CCNGG 2 cut(s) 1265, 2229
MunI CAATTG 1 cut(s) 2105
Mva1269I GAATGC 2 cut(s) 1103, 1636
MvaI CCWGG 2 cut(s) 1265, 2229
MwoI GCNNNNNNNGC 3 cut(s) 1671, 1775, 1829
NcoI CCATGG 1 cut(s) 1582
NdeI CATATG 2 cut(s) 1741, 1750
NmeAIII GCCGAG 1 cut(s) 2078
NmuCI GTSAC 2 cut(s) 1222, 1714
NsiI ATGCAT 3 cut(s) 327, 472, 592
NspI RCATGY 4 cut(s) 752, 1259, 1440, 2087
OliI CACNNNNGTG 1 cut(s) 926
PaeI GCATGC 2 cut(s) 752, 1440
PciI ACATGT 2 cut(s) 1255, 2083
PctI GAATGC 2 cut(s) 1103, 1636
PdmI GAANNNNTTC 2 cut(s) 440, 615
PfeI GAWTC 5 cut(s) 1106, 1208, 1307, 1477, 2248
PfoI TCCNGGA 1 cut(s) 2227
PkrI GCNGC 6 cut(s) 23, 1558, 1589, 1798, 2080, 2158
PleI GAGTC 2 cut(s) 800, 2208
PmaCI CACGTG 1 cut(s) 1403
PmlI CACGTG 1 cut(s) 1403
PpsI GAGTC 2 cut(s) 800, 2208
Ppu21I YACGTR 2 cut(s) 1044, 1403
PscI ACATGT 2 cut(s) 1255, 2083
Psp6I CCWGG 2 cut(s) 1263, 2227
PspCI CACGTG 1 cut(s) 1403
PspFI CCCAGC 2 cut(s) 383, 1297
PspGI CCWGG 2 cut(s) 1263, 2227
PspPI GGNCC 2 cut(s) 231, 1261
PsuI RGATCY 3 cut(s) 1578, 2033, 2224
PvuII CAGCTG 1 cut(s) 1799
RsaI GTAC 7 cut(s) 102, 578, 788, 839, 1032, 1649, 1700
RsaNI GTAC 7 cut(s) 101, 577, 787, 838, 1031, 1648, 1699
RseI CAYNNNNRTG 4 cut(s) 315, 753, 926, 1614
SaqAI TTAA 6 cut(s) 626, 702, 1146, 1169, 1179, 1470
SatI GCNGC 6 cut(s) 22, 1557, 1588, 1797, 2079, 2157
Sau96I GGNCC 2 cut(s) 231, 1261
SchI GAGTC 2 cut(s) 800, 2208
ScrFI CCNGG 2 cut(s) 1265, 2229
SduI GDGCHC 3 cut(s) 274, 933, 1932
SfaNI GCATC 6 cut(s) 427, 1176, 1360, 1494, 1539, 2008
SfcI CTRYAG 1 cut(s) 1456
SinI GGWCC 1 cut(s) 1261
SmiMI CAYNNNNRTG 4 cut(s) 315, 753, 926, 1614
SmlI CTYRAG 1 cut(s) 1977
SmoI CTYRAG 1 cut(s) 1977
SnaBI TACGTA 1 cut(s) 1044
SphI GCATGC 2 cut(s) 752, 1440
SsiI CCGC 2 cut(s) 1189, 1960
SspI AATATT 1 cut(s) 1686
SspMI CTAG 7 cut(s) 90, 489, 666, 1653, 1820, 1829, 1920
StyD4I CCNGG 2 cut(s) 1263, 2227
StyI CCWWGG 2 cut(s) 1582, 1919
TaaI ACNGT 6 cut(s) 425, 581, 826, 1283, 1457, 1874
TaiI ACGT 3 cut(s) 18, 1046, 1405
TaqI TCGA 5 cut(s) 525, 659, 1338, 1641, 2144
TaqII GACCGA 1 cut(s) 1905
TatI WGTACW 5 cut(s) 100, 786, 1030, 1647, 1698
TfiI GAWTC 5 cut(s) 1106, 1208, 1307, 1477, 2248
Tru1I TTAA 6 cut(s) 626, 702, 1146, 1169, 1179, 1470
Tru9I TTAA 6 cut(s) 626, 702, 1146, 1169, 1179, 1470
TscAI CASTG 5 cut(s) 123, 372, 829, 1286, 1545
TseFI GTSAC 2 cut(s) 1222, 1714
TseI GCWGC 6 cut(s) 21, 1556, 1587, 1796, 2078, 2156
Tsp45I GTSAC 2 cut(s) 1222, 1714
TspGWI ACGGA 2 cut(s) 916, 923
TspRI CASTG 5 cut(s) 123, 372, 829, 1286, 1545
VpaK11BI GGWCC 1 cut(s) 1261
XapI RAATTY 5 cut(s) 794, 896, 1007, 1120, 2110
XceI RCATGY 4 cut(s) 752, 1259, 1440, 2087
XmaJI CCTAGG 1 cut(s) 1919
XmiI GTMKAC 1 cut(s) 353
XmnI GAANNNNTTC 2 cut(s) 440, 615
XspI CTAG 7 cut(s) 90, 489, 666, 1653, 1820, 1829, 1920
Zsp2I ATGCAT 3 cut(s) 327, 472, 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.