Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0012289

Physical Location & Seq

Genomic Coordinates Forward (+)

34535582 .. 34538378

Gene Structure 2797 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029208

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGTTCAATGCTGATCACATGTCAGTAGTCAAGAATGTTCTTGTAGACAAGCTCTTTGACGTTGCTACCTACAATTGCCCAGTTGGGTTCGTAGTGACAACTGCTCCCCAAGTCGACGGCGTTTTAAAAAAGCGAGAAGAGAGGGGGAAGTTGTACAAACCAGGGCCAAACCTCGGCATTCGTATTCGGACTCAAATGCGAACTACGAAAGTAATCAGTTTCTATGGTCTTAGCAAACAAGTTGTCTATTCAAAGTTCTCAAAATCTGTGTCTTCTAGAAAAACTAGAAGAGAAGTACACAAACTCCACTCACTGATCATCACTTTAGGATTACACCAATCTGTGTTGTTCTCTGGCAAACTCATAAGCAAGTATGCCCAACTCAGAGACCCCATTTCTTCCCTCTCAGTTTTCCACCAAGTTTGGCCCAAACACAATCCCTATCTATGGAACTCAATCATCAGAGCACTTATCCATAATGGGCTTCACTCAAAAGCTCTCGCCCATTACAATGAAATGCATGGAATGAATGTTCAACCTGATAGGTATACCTTTCCTTCAGTGATCAATGCCTGTGCTGGGTTGTGTGATCTGGAAATGGGTATGGTTGTACATCACCGTATTTTGGAGAAGGGTTTCGGTTCAGACTTGTATATATGTAATGCATTGATAGATATGTATGCTAGATTTGGTGAACTAAGTAATGCACGCCATGTGTTTGATGAAATGCCTCAAAGAGATATTGTGTCGTTGAATAGTCTGATTTCGGGGTACAGTTCAAATGGATATTGGGAGGAAGCTTTGGAAATGTTTCGTAGATTAAGAATTGATGGGTTGTTACCGGATTGTTTTTCAATATCTAGTGTTCTGCCTGCGTGTGGAGGCTTGGTTGATGTTAAAGAGGGTCAGTTAGTTCACGCTATGGTTGAAAAGATTGGAGTGCATGCAGATGTTTTAGTATGTAATGGGCTTCTCTCAATGTACTTCAAATTTGGTTGGTTTAAAGATGCTCAAATTCTTTTTGATGAGATGGTAGTAAGGGACTCTGTTAGTTGGAACACTGTGATTTGTGGGTACTCGCAGTTGGGGTTATTTGAAGAGGCAATCAATTTGTTCAGGGAAATGATAAAGGAATTCACACCTGATTTGCTAACAATCACATCCGTGCTCCGTGCTTGTTCACATTTACAGGACTTGGAACTTGCAAAATATGTTCACGGCAACATGAAAAGAAGTGGTTTTGAATTTGATATAATGGCAAACAATGTACTTATTGATACGTATGCAAAATGTGGAAGTCTATTAGCTTCACGGGAAGTATTTCACTATATGGAATTCAGAGATTCTGTGTCATGGAATTCTATGATCAATGGTTACTTTCATAATGGTTGTTTTGATGAAGGGTTAAATCTTTTTAAGATGATGCGGAGTAATATGAAACCTGATTCTGTGAGTTTTGTGACGATTCTGTCTGTCTATACTCAACTCAGACATGTGGACCAGGGGAAAATGATCCACTGTGATATAGTGAAGCTGGGATTTGATTCAGATGTTATTGTCAACAATGTTCTTGTCGATTTGTATGCTAAATGTGGCAAAATACAAGATGCACTAAAAGTATTTGACAGCATGACAGCACGTGATGTTGTAACATGGAATAGCATAATTTCTGCATGCACTCATAATGAAGACTGTAGTTTAGGTTTTAGAATGATTCTTAGAATGAGAAATGAGGGAGTGATGCCTGACGCAGCAACAATGTTAGGCATCTTACCAGTGTGTTCCTTACTTGCTGCCAAGCAAAAAGGACAAGAGATCCATGGCTGCATTTTCAGGTTAGGATTTCATTCAGATGTTCCGGTTGGGAATGCACTAATCGAAATGTACTCTAGTTGTGGTAGCTTGAAAAGCTCCATAAGAATATTTGAGCAAATGTATATAAGGGATGTGGTGACATGGACTTCGTTGATCTCTGCATATGGGACATATGGTGAAGGTGAGAAAGCATTGAGAGCTTTTGAAGAAATGGAAGCAACTGGTGTTCTTCCTGATCATCTAGCTTTTCTGGCCATCATATATGCTTGTAGCCATTCAGGTTTGGTAGAAGACGGTCTGGCTTACTATGACCGAATGAAGAAACACTACAAAGTTGAGCCTAGGATGGAGCACTATGCTTGTGTAGTTGACCTTCTATCCCGCTCTGGGCTATTAGCTCAAGCTGAGGACTTTATCCATACAATGCCGATGAAGGCAGATGCAAGTATATGGGGATCTTTACTTAGTGCTTGCCGAGAAAATGGAGAAGAAAAGATAGCTGCACATGTCTCAGAGCAGATTGTTCAATTGAATTCTTATGACACGGGGTATCATGTTTTGGTGTCGAATGTATATGCAGCTTTAGGGAAGTGGGATAAAGTGAGAATGATGAGGAAACACATGAAAGCTAAAGGACTCACAAAAGATCCCGGATTTAGCTGGATGGATATTCAAAAGAAGGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

834

Amino Acids

93.99

Weight (kDa)

7.57

Isoelectric Point (pI)

37.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	148 - 193	2e-09	PPR repeat family
PPR_2	PF13041	246 - 293	2.4e-07	PPR repeat family
PPR	PF01535	249 - 278	4.1e-07	PPR repeat
PPR_2	PF13041	348 - 394	6.5e-10	PPR repeat family
PPR	PF01535	350 - 377	1.7e-08	PPR repeat
PPR_2	PF13041	448 - 492	3.9e-09	PPR repeat family
PPR	PF01535	450 - 477	3e-08	PPR repeat
PPR_2	PF13041	547 - 587	5.1e-06	PPR repeat family
PPR_2	PF13041	648 - 696	4e-09	PPR repeat family
PPR	PF01535	651 - 680	1e-05	PPR repeat
E_motif	PF20431	770 - 827	6.6e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03580
fragaria_vesca	FvH4_7g07570
malus_domestica	MD02G1235200.v1.1 MD02G1235800.v1.1
prunus_persica	Prupe.2G102800_v2.0.a1 Prupe.2G102800_v2.0.a1
pyrus_communis	pycom02g20250
rosa_chinensis	RchiOBHm_Chr1g0339001 RchiOBHm_Chr1g0343101
rosa_laevigata	RLG00000029204 RLG00000029208
rosa_multiflora	Rmu_sc0017585.1_g000006
rosa_roxburghii	Rroxscaffold_4G00313330
rosa_rugosa	Rorug01G0144200.1
rosa_samantha	Rh1AG160800 Rh1BG127800 Rh1CG150300 Rh1DG164000
rosa_wichuraiana	Rw1G013420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1468
AccBSI	CCGCTC	1 cut(s)	2199
AccI	GTMKAC	3 cut(s)	45, 114, 548
AciI	CCGC	2 cut(s)	1426, 2197
AclWI	GGATC	4 cut(s)	1507, 1810, 2278, 2456
AcoI	YGGCCR	1 cut(s)	2067
AcsI	RAATTY	7 cut(s)	989, 1014, 1133, 1244, 1334, 1357, 2347
AcuI	CTGAAG	1 cut(s)	543
AcvI	CACGTG	1 cut(s)	1640
AfaI	GTAC	8 cut(s)	155, 297, 612, 773, 983, 1076, 1269, 1886
AfiI	CCNNNNNNNGG	6 cut(s)	173, 447, 579, 625, 878, 2202
AflIII	ACRYGT	3 cut(s)	18, 1492, 2320
AjnI	CCWGG	2 cut(s)	160, 1500
AleI	CACNNNNGTG	1 cut(s)	1163
AloI	GAACNNNNNNTCC	2 cut(s)	516, 548
Alw21I	GWGCWC	3 cut(s)	469, 1170, 2169
Alw26I	GTCTC	2 cut(s)	381, 2329
AlwI	GGATC	4 cut(s)	1507, 1810, 2278, 2456
AoxI	GGCC	3 cut(s)	164, 425, 2067
ApeKI	GCWGC	5 cut(s)	1751, 1793, 1824, 2315, 2393
ApoI	RAATTY	7 cut(s)	989, 1014, 1133, 1244, 1334, 1357, 2347
ArsI	GACNNNNNNTTYG	8 cut(s)	38, 70, 228, 254, 260, 286, 1945, 1977
Asp700I	GAANNNNTTC	3 cut(s)	635, 810, 1320
AspA2I	CCTAGG	1 cut(s)	2156
AspS9I	GGNCC	3 cut(s)	164, 426, 1498
AsuC2I	CCSGG	1 cut(s)	2466
AsuHPI	GGTGA	5 cut(s)	608, 704, 1963, 2003, 2009
AvaII	GGWCC	1 cut(s)	1498
AvrII	CCTAGG	1 cut(s)	2156
BalI	TGGCCA	1 cut(s)	2069
BarI	GAAGNNNNNNTAC	4 cut(s)	2126, 2158, 2172, 2204
BbrPI	CACGTG	1 cut(s)	1640
BbsI	GAAGAC	3 cut(s)	264, 1695, 2112
Bbv12I	GWGCWC	3 cut(s)	469, 1170, 2169
BbvCI	CCTCAGC	1 cut(s)	2220
BbvI	GCAGC	5 cut(s)	1763, 1780, 1811, 2302, 2405
BccI	CCATC	5 cut(s)	824, 1024, 2078, 2155, 2473
BceAI	ACGGC	2 cut(s)	133, 1234
BcgI	CGANNNNNNTGC	2 cut(s)	1565, 1599
BciT130I	CCWGG	2 cut(s)	162, 1502
BclI	TGATCA	5 cut(s)	13, 315, 564, 1365, 2050
BcnI	CCSGG	1 cut(s)	2466
BcoDI	GTCTC	2 cut(s)	381, 2329
BfaI	CTAG	7 cut(s)	276, 285, 684, 861, 1890, 2057, 2157
BfmI	CTRYAG	1 cut(s)	1693
BisI	GCNGC	5 cut(s)	1752, 1794, 1825, 2316, 2394
BlnI	CCTAGG	1 cut(s)	2156
BlsI	GCNGC	5 cut(s)	1753, 1795, 1826, 2317, 2395
Bme1390I	CCNGG	3 cut(s)	162, 1502, 2466
Bme18I	GGWCC	1 cut(s)	1498
BmgT120I	GGNCC	3 cut(s)	164, 426, 1498
BmrFI	CCNGG	3 cut(s)	162, 1502, 2466
BmrI	ACTGGG	1 cut(s)	74
BmsI	GCATC	6 cut(s)	997, 1413, 1597, 1731, 1776, 2245
BmuI	ACTGGG	1 cut(s)	74
BpiI	GAAGAC	3 cut(s)	264, 1695, 2112
Bpu10I	CCTNAGC	1 cut(s)	2220
BpuEI	CTTGAG	1 cut(s)	2199
BpuMI	CCSGG	1 cut(s)	2466
BsaAI	YACGTR	2 cut(s)	1281, 1640
BsaI	GGTCTC	1 cut(s)	381
BsaJI	CCNNGG	5 cut(s)	161, 172, 1501, 1819, 2156
BsaWI	WCCGGW	2 cut(s)	841, 1858
BsaXI	ACNNNNNCTCC	6 cut(s)	88, 118, 288, 318, 873, 903
Bsc4I	CCNNNNNNNGG	6 cut(s)	173, 447, 579, 625, 878, 2202
Bse1I	ACTGG	3 cut(s)	80, 1775, 2041
BseBI	CCWGG	2 cut(s)	162, 1502
BseDI	CCNNGG	5 cut(s)	161, 172, 1501, 1819, 2156
BseGI	GGATG	4 cut(s)	1160, 1951, 2166, 2484
BseLI	CCNNNNNNNGG	6 cut(s)	173, 447, 579, 625, 878, 2202
BseMII	CTCAG	5 cut(s)	397, 420, 1501, 2211, 2340
BseNI	ACTGG	3 cut(s)	80, 1775, 2041
BseXI	GCAGC	5 cut(s)	1763, 1780, 1811, 2302, 2405
BseYI	CCCAGC	2 cut(s)	578, 1534
BsgI	GTGCAG	1 cut(s)	2301
BshFI	GGCC	3 cut(s)	166, 427, 2069
BsiHKAI	GWGCWC	3 cut(s)	469, 1170, 2169
BsiSI	CCGG	3 cut(s)	842, 1859, 2466
BslFI	GGGAC	2 cut(s)	1055, 1996
BslI	CCNNNNNNNGG	6 cut(s)	173, 447, 579, 625, 878, 2202
BsmAI	GTCTC	2 cut(s)	381, 2329
BsmFI	GGGAC	2 cut(s)	1055, 1996
BsmI	GAATGC	2 cut(s)	177, 1873
BsnI	GGCC	3 cut(s)	166, 427, 2069
Bso31I	GGTCTC	1 cut(s)	381
Bsp1286I	GDGCHC	3 cut(s)	469, 1170, 2169
Bsp1407I	TGTACA	2 cut(s)	153, 610
Bsp19I	CCATGG	1 cut(s)	1819
BspACI	CCGC	2 cut(s)	1426, 2197
BspANI	GGCC	3 cut(s)	166, 427, 2069
BspCNI	CTCAG	5 cut(s)	396, 419, 1500, 2212, 2339
BspPI	GGATC	4 cut(s)	1507, 1810, 2278, 2456
BspTNI	GGTCTC	1 cut(s)	381
BsrBI	CCGCTC	1 cut(s)	2199
BsrGI	TGTACA	2 cut(s)	153, 610
BsrI	ACTGG	3 cut(s)	80, 1775, 2041
BssECI	CCNNGG	5 cut(s)	161, 172, 1501, 1819, 2156
BssNAI	GTATAC	1 cut(s)	549
BssT1I	CCWWGG	2 cut(s)	1819, 2156
Bst1107I	GTATAC	1 cut(s)	549
Bst2UI	CCWGG	2 cut(s)	162, 1502
Bst4CI	ACNGT	6 cut(s)	620, 776, 1063, 1520, 1694, 2111
Bst6I	CTCTTC	3 cut(s)	132, 283, 1092
BstAUI	TGTACA	2 cut(s)	153, 610
BstBAI	YACGTR	2 cut(s)	1281, 1640
BstC8I	GCNNGC	5 cut(s)	709, 873, 945, 1675, 2287
BstDEI	CTNAG	9 cut(s)	230, 383, 406, 698, 1487, 1718, 2220, 2279, 2326
BstDSI	CCRYGG	1 cut(s)	1819
BstF5I	GGATG	4 cut(s)	1160, 1951, 2166, 2484
BstMAI	GTCTC	2 cut(s)	381, 2329
BstMWI	GCNNNNNNNGC	3 cut(s)	1908, 2012, 2066
BstNI	CCWGG	2 cut(s)	162, 1502
BstNSI	RCATGY	5 cut(s)	22, 947, 1496, 1677, 2324
BstSCI	CCNGG	3 cut(s)	160, 1500, 2464
BstSFI	CTRYAG	1 cut(s)	1693
BstSNI	TACGTA	1 cut(s)	1281
BstV1I	GCAGC	5 cut(s)	1763, 1780, 1811, 2302, 2405
BstV2I	GAAGAC	3 cut(s)	264, 1695, 2112
BstX2I	RGATCY	3 cut(s)	1815, 2270, 2461
BstYI	RGATCY	3 cut(s)	1815, 2270, 2461
BstZ17I	GTATAC	1 cut(s)	549
BsuRI	GGCC	3 cut(s)	166, 427, 2069
BtgI	CCRYGG	1 cut(s)	1819
BtsCI	GGATG	4 cut(s)	1160, 1951, 2166, 2484
BtsIMutI	CAGTG	5 cut(s)	311, 567, 1059, 1516, 1782
Cac8I	GCNNGC	5 cut(s)	709, 873, 945, 1675, 2287
Cfr13I	GGNCC	3 cut(s)	164, 426, 1498
CseI	GACGC	1 cut(s)	1757
Csp6I	GTAC	8 cut(s)	154, 296, 611, 772, 982, 1075, 1268, 1885
CspCI	CAANNNNNGTGG	2 cut(s)	404, 439
CviQI	GTAC	8 cut(s)	154, 296, 611, 772, 982, 1075, 1268, 1885
DdeI	CTNAG	9 cut(s)	230, 383, 406, 698, 1487, 1718, 2220, 2279, 2326
DraI	TTTAAA	2 cut(s)	126, 1003
DrdI	GACNNNNNNGTC	1 cut(s)	1468
DseDI	GACNNNNNNGTC	1 cut(s)	1468
EaeI	YGGCCR	1 cut(s)	2067
Eam1104I	CTCTTC	3 cut(s)	132, 283, 1092
EarI	CTCTTC	3 cut(s)	132, 283, 1092
Eco105I	TACGTA	1 cut(s)	1281
Eco130I	CCWWGG	2 cut(s)	1819, 2156
Eco31I	GGTCTC	1 cut(s)	381
Eco47I	GGWCC	1 cut(s)	1498
Eco57I	CTGAAG	1 cut(s)	543
Eco72I	CACGTG	1 cut(s)	1640
EcoRI	GAATTC	4 cut(s)	1133, 1334, 1357, 2347
EcoRII	CCWGG	2 cut(s)	160, 1500
EcoT14I	CCWWGG	2 cut(s)	1819, 2156
EcoT22I	ATGCAT	2 cut(s)	522, 667
ErhI	CCWWGG	2 cut(s)	1819, 2156
FaqI	GGGAC	2 cut(s)	1055, 1996
FauI	CCCGC	1 cut(s)	2204
FauNDI	CATATG	2 cut(s)	1978, 1987
FbaI	TGATCA	5 cut(s)	13, 315, 564, 1365, 2050
FblI	GTMKAC	3 cut(s)	45, 114, 548
Fnu4HI	GCNGC	5 cut(s)	1752, 1794, 1825, 2316, 2394
FokI	GGATG	4 cut(s)	1147, 1958, 2173, 2491
Fsp4HI	GCNGC	5 cut(s)	1752, 1794, 1825, 2316, 2394
FspBI	CTAG	7 cut(s)	276, 285, 684, 861, 1890, 2057, 2157
GluI	GCNGC	5 cut(s)	1752, 1794, 1825, 2316, 2394
GsaI	CCCAGC	2 cut(s)	582, 1538
HaeIII	GGCC	3 cut(s)	166, 427, 2069
HapII	CCGG	3 cut(s)	842, 1859, 2466
HgaI	GACGC	1 cut(s)	1757
HincII	GTYRAC	3 cut(s)	115, 1561, 2185
HindII	GTYRAC	3 cut(s)	115, 1561, 2185
HindIII	AAGCTT	1 cut(s)	798
HinfI	GANTC	8 cut(s)	190, 1043, 1343, 1445, 1465, 1544, 1714, 2451
HpaII	CCGG	3 cut(s)	842, 1859, 2466
HphI	GGTGA	5 cut(s)	608, 704, 1963, 2003, 2009
Hpy188III	TCNNGA	4 cut(s)	31, 276, 593, 2048
Hpy99I	CGWCG	1 cut(s)	119
HpyAV	CCTTC	7 cut(s)	567, 625, 1394, 1988, 2198, 2242, 2488
HpyCH4III	ACNGT	6 cut(s)	620, 776, 1063, 1520, 1694, 2111
HpyCH4IV	ACGT	3 cut(s)	60, 1280, 1639
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1908, 2012, 2066
HpyF3I	CTNAG	9 cut(s)	230, 383, 406, 698, 1487, 1718, 2220, 2279, 2326
HpySE526I	ACGT	3 cut(s)	60, 1280, 1639
Ksp22I	TGATCA	5 cut(s)	13, 315, 564, 1365, 2050
LmnI	GCTCC	4 cut(s)	109, 1173, 1916, 2164
Lsp1109I	GCAGC	5 cut(s)	1763, 1780, 1811, 2302, 2405
LweI	GCATC	6 cut(s)	997, 1413, 1597, 1731, 1776, 2245
MaeI	CTAG	7 cut(s)	276, 285, 684, 861, 1890, 2057, 2157
MaeII	ACGT	3 cut(s)	60, 1280, 1639
MaeIII	GTNAC	6 cut(s)	94, 837, 1373, 1459, 1648, 1951
MbiI	CCGCTC	1 cut(s)	2199
MfeI	CAATTG	2 cut(s)	73, 2342
MflI	RGATCY	3 cut(s)	1815, 2270, 2461
MhlI	GDGCHC	3 cut(s)	469, 1170, 2169
MlsI	TGGCCA	1 cut(s)	2069
MluNI	TGGCCA	1 cut(s)	2069
MlyI	GAGTC	3 cut(s)	184, 1037, 2445
MmeI	TCCRAC	1 cut(s)	1034
Mox20I	TGGCCA	1 cut(s)	2069
Mph1103I	ATGCAT	2 cut(s)	522, 667
MroXI	GAANNNNTTC	3 cut(s)	635, 810, 1320
MscI	TGGCCA	1 cut(s)	2069
MseI	TTAA	6 cut(s)	125, 821, 897, 1002, 1406, 1416
MslI	CAYNNNNRTG	4 cut(s)	510, 948, 1163, 1851
Msp20I	TGGCCA	1 cut(s)	2069
MspI	CCGG	3 cut(s)	842, 1859, 2466
MspR9I	CCNGG	3 cut(s)	162, 1502, 2466
MunI	CAATTG	2 cut(s)	73, 2342
Mva1269I	GAATGC	2 cut(s)	177, 1873
MvaI	CCWGG	2 cut(s)	162, 1502
MwoI	GCNNNNNNNGC	3 cut(s)	1908, 2012, 2066
NciI	CCSGG	1 cut(s)	2466
NcoI	CCATGG	1 cut(s)	1819
NdeI	CATATG	2 cut(s)	1978, 1987
NmeAIII	GCCGAG	2 cut(s)	153, 2315
NmuCI	GTSAC	3 cut(s)	94, 1459, 1951
NsiI	ATGCAT	2 cut(s)	522, 667
NspI	RCATGY	5 cut(s)	22, 947, 1496, 1677, 2324
OliI	CACNNNNGTG	1 cut(s)	1163
PaeI	GCATGC	2 cut(s)	947, 1677
PciI	ACATGT	3 cut(s)	18, 1492, 2320
PctI	GAATGC	2 cut(s)	177, 1873
PdmI	GAANNNNTTC	3 cut(s)	635, 810, 1320
PfeI	GAWTC	5 cut(s)	1343, 1445, 1465, 1544, 1714
PfoI	TCCNGGA	1 cut(s)	2464
PkrI	GCNGC	5 cut(s)	1753, 1795, 1826, 2317, 2395
PleI	GAGTC	3 cut(s)	184, 1037, 2445
PmaCI	CACGTG	1 cut(s)	1640
PmlI	CACGTG	1 cut(s)	1640
PpsI	GAGTC	3 cut(s)	184, 1037, 2445
Ppu21I	YACGTR	2 cut(s)	1281, 1640
PscI	ACATGT	3 cut(s)	18, 1492, 2320
Psp6I	CCWGG	2 cut(s)	160, 1500
PspCI	CACGTG	1 cut(s)	1640
PspFI	CCCAGC	2 cut(s)	578, 1534
PspGI	CCWGG	2 cut(s)	160, 1500
PspPI	GGNCC	3 cut(s)	164, 426, 1498
PsuI	RGATCY	3 cut(s)	1815, 2270, 2461
RsaI	GTAC	8 cut(s)	155, 297, 612, 773, 983, 1076, 1269, 1886
RsaNI	GTAC	8 cut(s)	154, 296, 611, 772, 982, 1075, 1268, 1885
RseI	CAYNNNNRTG	4 cut(s)	510, 948, 1163, 1851
SalI	GTCGAC	1 cut(s)	113
SaqAI	TTAA	6 cut(s)	125, 821, 897, 1002, 1406, 1416
SatI	GCNGC	5 cut(s)	1752, 1794, 1825, 2316, 2394
Sau96I	GGNCC	3 cut(s)	164, 426, 1498
SchI	GAGTC	3 cut(s)	184, 1037, 2445
ScrFI	CCNGG	3 cut(s)	162, 1502, 2466
SduI	GDGCHC	3 cut(s)	469, 1170, 2169
SfaNI	GCATC	6 cut(s)	997, 1413, 1597, 1731, 1776, 2245
SfcI	CTRYAG	1 cut(s)	1693
SinI	GGWCC	1 cut(s)	1498
SmiMI	CAYNNNNRTG	4 cut(s)	510, 948, 1163, 1851
SmlI	CTYRAG	1 cut(s)	2214
SmoI	CTYRAG	1 cut(s)	2214
SnaBI	TACGTA	1 cut(s)	1281
SphI	GCATGC	2 cut(s)	947, 1677
SsiI	CCGC	2 cut(s)	1426, 2197
SspI	AATATT	1 cut(s)	1923
SspMI	CTAG	7 cut(s)	276, 285, 684, 861, 1890, 2057, 2157
StyD4I	CCNGG	3 cut(s)	160, 1500, 2464
StyI	CCWWGG	2 cut(s)	1819, 2156
TaaI	ACNGT	6 cut(s)	620, 776, 1063, 1520, 1694, 2111
TaiI	ACGT	3 cut(s)	63, 1283, 1642
TaqI	TCGA	4 cut(s)	114, 1575, 1878, 2381
TaqII	GACCGA	1 cut(s)	2142
TatI	WGTACW	6 cut(s)	153, 295, 610, 981, 1267, 1884
TfiI	GAWTC	5 cut(s)	1343, 1445, 1465, 1544, 1714
Tru1I	TTAA	6 cut(s)	125, 821, 897, 1002, 1406, 1416
Tru9I	TTAA	6 cut(s)	125, 821, 897, 1002, 1406, 1416
TscAI	CASTG	5 cut(s)	318, 567, 1066, 1523, 1782
TseFI	GTSAC	3 cut(s)	94, 1459, 1951
TseI	GCWGC	5 cut(s)	1751, 1793, 1824, 2315, 2393
Tsp45I	GTSAC	3 cut(s)	94, 1459, 1951
TspGWI	ACGGA	2 cut(s)	1153, 1160
TspRI	CASTG	5 cut(s)	318, 567, 1066, 1523, 1782
VpaK11BI	GGWCC	1 cut(s)	1498
XapI	RAATTY	7 cut(s)	989, 1014, 1133, 1244, 1334, 1357, 2347
XbaI	TCTAGA	1 cut(s)	275
XceI	RCATGY	5 cut(s)	22, 947, 1496, 1677, 2324
XmaJI	CCTAGG	1 cut(s)	2156
XmiI	GTMKAC	3 cut(s)	45, 114, 548
XmnI	GAANNNNTTC	3 cut(s)	635, 810, 1320
XspI	CTAG	7 cut(s)	276, 285, 684, 861, 1890, 2057, 2157
Zsp2I	ATGCAT	2 cut(s)	522, 667

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.