Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0012289

Physical Location & Seq

Genomic Coordinates Forward (+)

18394960 .. 18397263

Gene Structure 2304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g20250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGAAAACTGGAAACTTGAGCAGTATAAGTTGCCGTACCAAAGAAGTTGTGTATCCGTTATTCTCAAAAGCTCTTTCCTCTGCTAAAAACTGCACTGAATTACAAAAAGTCCACTCACAGATTGTCACCTCAGGATTACACCATTCCGTCTTCTTCTCCGGCAAACTCATAAGCAAATATGCTCAGCTCAGAGACCCCATTTCCTCCCTCTCAGTTTTCCACCAAGCTCTTCCCAAAAGCAATGCCTACCTATGGAATTCAATCATCAGAGCGCTTATCCACAGTGGGTTTTACTCAAAAGCTCTTGACCACTACACTGAAATGGATAAATTGAATGTTCGACCTGATAGGTATACATTTCCTTCAGTGATCAATGCCTGTGCTGCGTTATGTGATCTGGAAATGGGCATGATTGTTCATCAGCGTGTTTCCGAAATGGGTTTTGGATCAGACCTGTACATTGGTAATGCAGTGATAGACATGTATTGTAGATTTGGAGAACTTGGCAAAGCACGGCAACTGTTTGAGCAAATGCCTGAAAGGGATATTGTGTCGTGGAATACTGTGATTTCGGGCTACAGTTCGAATGGATATTGGGAGGAAGCTTTGGAAATTTTTCGTAGGCTGAGAATGGATGGGTTGTTACCGGATTCTTTTTCCATATCTGGTGTTTTGCCTGCGTGCGGAGGCTTGGTTGATGTTAAAGAGGGTCAGATAGTTCATGCTTTGATTGAGAAGATTGGGGTCCATGCTGATGTTTTAGTAAGCAATGGACTTCTTTCAATGTACTTAAAATTTGGTTGGTTAAAAGATGCTCAAAGTCTTTTCGAGAAGATGGTAGTTAGGGACTCAGTTAGTTGGAACACTGTGATTTGTGGGTACTCTCAGTTGGGGTTGTTTAAAGACTCAATCAAATTGTTTAAGCAAATGGTGAATGAATTTACACCTGATTTGCTAACAATCACTTCTGTTCTCCGTGCTTGTGCTCATTTACGGGATCTGAGGCTTGCAAGATATGTTCATGACTACATGAAAAGAAGTGCTTTTCAATTTGATACTATGGCAAATAACATACTTATTGATATGTATGCAAAATGTGGAAACTTATTAGCTTCCCAAGAAGTATTTGATCATATGGAATGTAGGGATGCTGTGTCGTGGAATTCATTGATCAATGGTTATTTTCTTAATGGTTATTCTGATGAAGGGTTCAACCTTTTTAAGGCGATGAAGAGTAGTGTGAAACCCGACTCTGTGAGTTATGTGATGATCCTGTCAATTTCTACTCAGCTAGCAGATGTGGACAAGGGGAAAATGATCCACTGTGATACGGTAAAATTGGGATTCGATTTAGATGTTATCGTCAACAATGCTCTTGTAGATATATATGCTAAATGTGGCAAAATAAAGGATTCGCTACTGGTATTTGAGATTATGGAAGTTCGTGATGTAGTAACATGGAATACCATAATTGCTGCTTGCATTCACTATGACGATTGTAGTTTAGGGTTAAGAATGATTCGTAGAATGAGGAATGAGGGAGTGATGCCCGATGCAGCCACCATGTTAGGTATCTTGCCTGTATGTTCCTTGCTTGCCGCAAAGCAACAAGGAAAAGAGATCCATGGGTGCATTTTAAGGTTAGGATTTAATTCAGATGTCCCTGTTGGGAATGCACTAATAGAAATGTATTCTAGCTGTGGTAGTTTGGAAAACTCCATACGAGTATTTGAGCATATGAGAAAGAAGGATGTGGTGACGTGGACCTCCATGATCTCTGCCTATGGGACATATGGTGACGGAGTGAAAGCAGTAAGAACTTTTGCAGAAATGGAAGCAACAGGTGTCCTTCCTGATCATCTTGCTTTCCTTGCTGTCATATTTTCTTGTAGCCATTCAGGTTTAGTAGAAGAAGGTCTGGCTTACTTCAACCGGATGAAGAACTACAAACTTGAACCTAGGATCGAACACTTTGCTTGTGTAGTTGACCTCCTCTCACGGTGTGGCTTATTAGCTCAAGCAGAGGACTTTATCCATTCAATGCCAATGAAGGCAGATGCAAGTATATGGGGATCTTTACTTAGTGCTAGTCGAGCTAGTGGAGATACAGATATAGCTGCACGTGTCTCAGAACAGATAATTCAATTGAATTCTAATGATATGGGGTATCATGTTTTGGTCTCAAATGTATATGCAGCTTTAGGGAAGTGGGATCAAGTGAGAAGAATCCGGAAATGCATGCAAGCTAAAGGACTCACAAAAAATCCTGGATTTAGCTGGATGGAGATTCAAAAGAATGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

768

Amino Acids

85.73

Weight (kDa)

7.04

Isoelectric Point (pI)

36.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	81 - 128	7.8e-09	PPR repeat family
PPR_2	PF13041	181 - 228	4.6e-09	PPR repeat family
PPR	PF01535	184 - 214	1.1e-08	PPR repeat
PPR_2	PF13041	283 - 330	1.5e-08	PPR repeat family
PPR	PF01535	285 - 312	3.2e-06	PPR repeat
PPR_2	PF13041	383 - 425	1.3e-08	PPR repeat family
PPR	PF01535	385 - 412	2.2e-06	PPR repeat
PPR_2	PF13041	482 - 522	6.3e-06	PPR repeat family
PPR_2	PF13041	583 - 628	1.4e-07	PPR repeat family
E_motif	PF20431	703 - 762	3e-14	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03580
fragaria_vesca	FvH4_7g07570
malus_domestica	MD02G1235200.v1.1 MD02G1235800.v1.1
prunus_persica	Prupe.2G102800_v2.0.a1 Prupe.2G102800_v2.0.a1
pyrus_communis	pycom02g20250
rosa_chinensis	RchiOBHm_Chr1g0339001 RchiOBHm_Chr1g0343101
rosa_laevigata	RLG00000029204 RLG00000029208
rosa_multiflora	Rmu_sc0017585.1_g000006
rosa_roxburghii	Rroxscaffold_4G00313330
rosa_rugosa	Rorug01G0144200.1
rosa_samantha	Rh1AG160800 Rh1BG127800 Rh1CG150300 Rh1DG164000
rosa_wichuraiana	Rw1G013420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	353
AccIII	TCCGGA	1 cut(s)	2229
AciI	CCGC	2 cut(s)	684, 1599
AclWI	GGATC	8 cut(s)	454, 1005, 1264, 1312, 1615, 1970, 2080, 2220
AcsI	RAATTY	6 cut(s)	256, 612, 794, 938, 1162, 2149
AcuI	CTGAAG	1 cut(s)	348
AcvI	CACGTG	1 cut(s)	2123
AdeI	CACNNNGTG	1 cut(s)	2003
AfaI	GTAC	4 cut(s)	37, 458, 788, 881
AfeI	AGCGCT	1 cut(s)	273
AfiI	CCNNNNNNNGG	3 cut(s)	252, 683, 1222
AflIII	ACRYGT	2 cut(s)	480, 2122
AjiI	CACGTC	1 cut(s)	1761
AjnI	CCWGG	1 cut(s)	2266
AjuI	GAANNNNNNNTTGG	2 cut(s)	426, 458
Alw21I	GWGCWC	1 cut(s)	988
Alw26I	GTCTC	3 cut(s)	186, 2131, 2185
AlwI	GGATC	8 cut(s)	454, 1005, 1264, 1312, 1615, 1970, 2080, 2220
Aor13HI	TCCGGA	1 cut(s)	2229
Aor51HI	AGCGCT	1 cut(s)	273
ApeKI	GCWGC	5 cut(s)	383, 1475, 1556, 2117, 2195
ApoI	RAATTY	6 cut(s)	256, 612, 794, 938, 1162, 2149
Asp700I	GAANNNNTTC	1 cut(s)	615
AspA2I	CCTAGG	1 cut(s)	1958
AspLEI	GCGC	1 cut(s)	274
AspS9I	GGNCC	2 cut(s)	745, 1764
AsuHPI	GGTGA	4 cut(s)	118, 943, 1768, 1808
AsuII	TTCGAA	1 cut(s)	584
AsuNHI	GCTAGC	1 cut(s)	1291
AvaII	GGWCC	2 cut(s)	745, 1764
AvrII	CCTAGG	1 cut(s)	1958
AxyI	CCTNAGG	1 cut(s)	130
BbrPI	CACGTG	1 cut(s)	2123
BbsI	GAAGAC	1 cut(s)	142
Bbv12I	GWGCWC	1 cut(s)	988
BbvI	GCAGC	5 cut(s)	370, 1462, 1568, 2104, 2207
BccI	CCATC	3 cut(s)	629, 829, 2275
BceAI	ACGGC	2 cut(s)	18, 530
BcgI	CGANNNNNNTGC	2 cut(s)	1955, 1989
BciT130I	CCWGG	1 cut(s)	2268
BciVI	GTATCC	1 cut(s)	63
BclI	TGATCA	4 cut(s)	369, 1129, 1170, 1855
BcoDI	GTCTC	3 cut(s)	186, 2131, 2185
BfaI	CTAG	5 cut(s)	1292, 1695, 1959, 2088, 2097
BfmI	CTRYAG	1 cut(s)	577
BfoI	RGCGCY	1 cut(s)	275
BfuI	GTATCC	1 cut(s)	63
BisI	GCNGC	6 cut(s)	384, 1476, 1557, 1599, 2118, 2196
BlnI	CCTAGG	1 cut(s)	1958
BlpI	GCTNAGC	1 cut(s)	183
BlsI	GCNGC	6 cut(s)	385, 1477, 1558, 1600, 2119, 2197
Bme1390I	CCNGG	1 cut(s)	2268
Bme18I	GGWCC	2 cut(s)	745, 1764
BmgBI	CACGTC	1 cut(s)	1761
BmgT120I	GGNCC	2 cut(s)	745, 1764
BmiI	GGNNCC	1 cut(s)	746
BmrFI	CCNGG	1 cut(s)	2268
BmsI	GCATC	5 cut(s)	802, 1138, 1536, 1543, 2047
BmtI	GCTAGC	1 cut(s)	1295
BpiI	GAAGAC	1 cut(s)	142
Bpu1102I	GCTNAGC	1 cut(s)	183
Bpu14I	TTCGAA	1 cut(s)	584
BpuEI	CTTGAG	2 cut(s)	37, 2001
BsaAI	YACGTR	1 cut(s)	2123
BsaI	GGTCTC	2 cut(s)	186, 2185
BsaJI	CCNNGG	2 cut(s)	1624, 1958
BsaWI	WCCGGW	3 cut(s)	646, 1932, 2229
BsaXI	ACNNNNNCTCC	2 cut(s)	678, 708
Bsc4I	CCNNNNNNNGG	3 cut(s)	252, 683, 1222
Bse1I	ACTGG	2 cut(s)	13, 1425
Bse21I	CCTNAGG	1 cut(s)	130
Bse3DI	GCAATG	2 cut(s)	247, 775
BseAI	TCCGGA	1 cut(s)	2229
BseBI	CCWGG	1 cut(s)	2268
BseDI	CCNNGG	2 cut(s)	1624, 1958
BseGI	GGATG	5 cut(s)	640, 1153, 1756, 1941, 2286
BseLI	CCNNNNNNNGG	3 cut(s)	252, 683, 1222
BseMI	GCAATG	2 cut(s)	247, 775
BseNI	ACTGG	2 cut(s)	13, 1425
BseRI	GAGGAG	1 cut(s)	1982
BseXI	GCAGC	5 cut(s)	370, 1462, 1568, 2104, 2207
BsgI	GTGCAG	2 cut(s)	76, 2103
BsiHKAI	GWGCWC	1 cut(s)	988
BsiSI	CCGG	4 cut(s)	159, 647, 1933, 2230
BslFI	GGGAC	3 cut(s)	860, 1646, 1801
BslI	CCNNNNNNNGG	3 cut(s)	252, 683, 1222
BsmAI	GTCTC	3 cut(s)	186, 2131, 2185
BsmFI	GGGAC	3 cut(s)	860, 1646, 1801
BsmI	GAATGC	2 cut(s)	1482, 1678
Bso31I	GGTCTC	2 cut(s)	186, 2185
Bsp119I	TTCGAA	1 cut(s)	584
Bsp1286I	GDGCHC	1 cut(s)	988
Bsp13I	TCCGGA	1 cut(s)	2229
Bsp1407I	TGTACA	1 cut(s)	456
Bsp1720I	GCTNAGC	1 cut(s)	183
Bsp19I	CCATGG	1 cut(s)	1624
BspACI	CCGC	2 cut(s)	684, 1599
BspEI	TCCGGA	1 cut(s)	2229
BspHI	TCATGA	1 cut(s)	1021
BspLI	GGNNCC	1 cut(s)	746
BspOI	GCTAGC	1 cut(s)	1295
BspPI	GGATC	8 cut(s)	454, 1005, 1264, 1312, 1615, 1970, 2080, 2220
BspQI	GCTCTTC	1 cut(s)	234
BspT104I	TTCGAA	1 cut(s)	584
BspTNI	GGTCTC	2 cut(s)	186, 2185
BsrDI	GCAATG	2 cut(s)	247, 775
BsrGI	TGTACA	1 cut(s)	456
BsrI	ACTGG	2 cut(s)	13, 1425
BssECI	CCNNGG	2 cut(s)	1624, 1958
BssNAI	GTATAC	1 cut(s)	354
BssT1I	CCWWGG	2 cut(s)	1624, 1958
Bst1107I	GTATAC	1 cut(s)	354
Bst2UI	CCWGG	1 cut(s)	2268
Bst4CI	ACNGT	8 cut(s)	284, 522, 565, 581, 868, 1325, 1333, 2001
Bst6I	CTCTTC	2 cut(s)	234, 1226
BstAUI	TGTACA	1 cut(s)	456
BstBAI	YACGTR	1 cut(s)	2123
BstBI	TTCGAA	1 cut(s)	584
BstC8I	GCNNGC	8 cut(s)	678, 682, 1008, 1293, 1480, 1596, 2240, 2244
BstDSI	CCRYGG	1 cut(s)	1624
BstENI	CCTNNNNNAGG	1 cut(s)	1220
BstF5I	GGATG	5 cut(s)	640, 1153, 1756, 1941, 2286
BstH2I	RGCGCY	1 cut(s)	275
BstHHI	GCGC	1 cut(s)	274
BstMAI	GTCTC	3 cut(s)	186, 2131, 2185
BstMWI	GCNNNNNNNGC	3 cut(s)	383, 1871, 2093
BstNI	CCWGG	1 cut(s)	2268
BstNSI	RCATGY	2 cut(s)	484, 2242
BstSCI	CCNGG	1 cut(s)	2266
BstSFI	CTRYAG	1 cut(s)	577
BstV1I	GCAGC	5 cut(s)	370, 1462, 1568, 2104, 2207
BstV2I	GAAGAC	1 cut(s)	142
BstX2I	RGATCY	3 cut(s)	997, 1620, 2072
BstYI	RGATCY	3 cut(s)	997, 1620, 2072
BstZ17I	GTATAC	1 cut(s)	354
Bsu36I	CCTNAGG	1 cut(s)	130
BsuI	GTATCC	1 cut(s)	63
BtgI	CCRYGG	1 cut(s)	1624
BtgZI	GCGATG	1 cut(s)	1241
BtrI	CACGTC	1 cut(s)	1761
BtsCI	GGATG	5 cut(s)	640, 1153, 1756, 1941, 2286
BtsI	GCAGTG	1 cut(s)	477
BtsIMutI	CAGTG	7 cut(s)	93, 289, 315, 372, 477, 864, 1321
Cac8I	GCNNGC	8 cut(s)	678, 682, 1008, 1293, 1480, 1596, 2240, 2244
CciI	TCATGA	1 cut(s)	1021
CfoI	GCGC	1 cut(s)	274
Cfr13I	GGNCC	2 cut(s)	745, 1764
Csp6I	GTAC	4 cut(s)	36, 457, 787, 880
CviQI	GTAC	4 cut(s)	36, 457, 787, 880
DraI	TTTAAA	1 cut(s)	901
DraIII	CACNNNGTG	1 cut(s)	2003
Eam1104I	CTCTTC	2 cut(s)	234, 1226
EarI	CTCTTC	2 cut(s)	234, 1226
Eco130I	CCWWGG	2 cut(s)	1624, 1958
Eco31I	GGTCTC	2 cut(s)	186, 2185
Eco47I	GGWCC	2 cut(s)	745, 1764
Eco47III	AGCGCT	1 cut(s)	273
Eco57I	CTGAAG	1 cut(s)	348
Eco72I	CACGTG	1 cut(s)	2123
Eco81I	CCTNAGG	1 cut(s)	130
EcoNI	CCTNNNNNAGG	1 cut(s)	1220
EcoRI	GAATTC	3 cut(s)	256, 1162, 2149
EcoRII	CCWGG	1 cut(s)	2266
EcoT14I	CCWWGG	2 cut(s)	1624, 1958
EcoT22I	ATGCAT	1 cut(s)	2240
ErhI	CCWWGG	2 cut(s)	1624, 1958
FalI	AAGNNNNNCTT	2 cut(s)	1027, 1059
FaqI	GGGAC	3 cut(s)	860, 1646, 1801
FauNDI	CATATG	3 cut(s)	1134, 1737, 1792
FbaI	TGATCA	4 cut(s)	369, 1129, 1170, 1855
FblI	GTMKAC	1 cut(s)	353
Fnu4HI	GCNGC	6 cut(s)	384, 1476, 1557, 1599, 2118, 2196
FokI	GGATG	5 cut(s)	647, 1160, 1763, 1948, 2293
Fsp4HI	GCNGC	6 cut(s)	384, 1476, 1557, 1599, 2118, 2196
FspBI	CTAG	5 cut(s)	1292, 1695, 1959, 2088, 2097
GlaI	GCGC	1 cut(s)	273
GluI	GCNGC	6 cut(s)	384, 1476, 1557, 1599, 2118, 2196
HaeII	RGCGCY	1 cut(s)	275
HapII	CCGG	4 cut(s)	159, 647, 1933, 2230
HhaI	GCGC	1 cut(s)	274
Hin6I	GCGC	1 cut(s)	272
HinP1I	GCGC	1 cut(s)	272
HincII	GTYRAC	2 cut(s)	1366, 1987
HindII	GTYRAC	2 cut(s)	1366, 1987
HindIII	AAGCTT	1 cut(s)	603
HpaII	CCGG	4 cut(s)	159, 647, 1933, 2230
HphI	GGTGA	4 cut(s)	118, 943, 1768, 1808
Hpy166II	GTNNAC	6 cut(s)	112, 354, 1303, 1366, 1764, 1987
Hpy188I	TCNGA	9 cut(s)	191, 269, 433, 451, 714, 1002, 1201, 1657, 2131
Hpy188III	TCNNGA	8 cut(s)	132, 305, 398, 829, 1022, 1445, 1853, 2230
Hpy8I	GTNNAC	6 cut(s)	112, 354, 1303, 1366, 1764, 1987
HpyAV	CCTTC	6 cut(s)	372, 1199, 1741, 1859, 1907, 2044
HpyCH4III	ACNGT	8 cut(s)	284, 522, 565, 581, 868, 1325, 1333, 2001
HpyCH4IV	ACGT	2 cut(s)	1760, 2122
HpyF10VI	GCNNNNNNNGC	3 cut(s)	383, 1871, 2093
HpySE526I	ACGT	2 cut(s)	1760, 2122
HspAI	GCGC	1 cut(s)	272
Kpn2I	TCCGGA	1 cut(s)	2229
Ksp22I	TGATCA	4 cut(s)	369, 1129, 1170, 1855
LguI	GCTCTTC	1 cut(s)	234
Lsp1109I	GCAGC	5 cut(s)	370, 1462, 1568, 2104, 2207
LweI	GCATC	5 cut(s)	802, 1138, 1536, 1543, 2047
MaeI	CTAG	5 cut(s)	1292, 1695, 1959, 2088, 2097
MaeII	ACGT	2 cut(s)	1760, 2122
MaeIII	GTNAC	5 cut(s)	124, 642, 1453, 1756, 1796
MboII	GAAGA	9 cut(s)	142, 145, 221, 748, 844, 1243, 1922, 1951, 2235
MfeI	CAATTG	1 cut(s)	2144
MflI	RGATCY	3 cut(s)	997, 1620, 2072
MhlI	GDGCHC	1 cut(s)	988
MlyI	GAGTC	4 cut(s)	842, 899, 1244, 2247
MmeI	TCCRAC	1 cut(s)	839
Mph1103I	ATGCAT	1 cut(s)	2240
MroI	TCCGGA	1 cut(s)	2229
MroXI	GAANNNNTTC	1 cut(s)	615
MslI	CAYNNNNRTG	3 cut(s)	320, 423, 753
MspI	CCGG	4 cut(s)	159, 647, 1933, 2230
MspR9I	CCNGG	1 cut(s)	2268
MunI	CAATTG	1 cut(s)	2144
Mva1269I	GAATGC	2 cut(s)	1482, 1678
MvaI	CCWGG	1 cut(s)	2268
MwoI	GCNNNNNNNGC	3 cut(s)	383, 1871, 2093
NcoI	CCATGG	1 cut(s)	1624
NdeI	CATATG	3 cut(s)	1134, 1737, 1792
NheI	GCTAGC	1 cut(s)	1291
NlaIV	GGNNCC	1 cut(s)	746
NmuCI	GTSAC	3 cut(s)	124, 1756, 1796
NsiI	ATGCAT	1 cut(s)	2240
NspI	RCATGY	2 cut(s)	484, 2242
NspV	TTCGAA	1 cut(s)	584
PaeI	GCATGC	1 cut(s)	2242
PagI	TCATGA	1 cut(s)	1021
PciI	ACATGT	1 cut(s)	480
PciSI	GCTCTTC	1 cut(s)	234
PctI	GAATGC	2 cut(s)	1482, 1678
PdmI	GAANNNNTTC	1 cut(s)	615
PfeI	GAWTC	6 cut(s)	650, 1344, 1412, 1519, 2226, 2287
PfoI	TCCNGGA	1 cut(s)	2266
PkrI	GCNGC	6 cut(s)	385, 1477, 1558, 1600, 2119, 2197
PleI	GAGTC	4 cut(s)	842, 899, 1244, 2247
PmaCI	CACGTG	1 cut(s)	2123
PmlI	CACGTG	1 cut(s)	2123
PpsI	GAGTC	4 cut(s)	842, 899, 1244, 2247
Ppu21I	YACGTR	1 cut(s)	2123
PscI	ACATGT	1 cut(s)	480
Psp6I	CCWGG	1 cut(s)	2266
PspCI	CACGTG	1 cut(s)	2123
PspGI	CCWGG	1 cut(s)	2266
PspN4I	GGNNCC	1 cut(s)	746
PspPI	GGNCC	2 cut(s)	745, 1764
PsuI	RGATCY	3 cut(s)	997, 1620, 2072
RsaI	GTAC	4 cut(s)	37, 458, 788, 881
RsaNI	GTAC	4 cut(s)	36, 457, 787, 880
RseI	CAYNNNNRTG	3 cut(s)	320, 423, 753
SapI	GCTCTTC	1 cut(s)	234
SatI	GCNGC	6 cut(s)	384, 1476, 1557, 1599, 2118, 2196
Sau96I	GGNCC	2 cut(s)	745, 1764
SchI	GAGTC	4 cut(s)	842, 899, 1244, 2247
ScrFI	CCNGG	1 cut(s)	2268
SduI	GDGCHC	1 cut(s)	988
SfaNI	GCATC	5 cut(s)	802, 1138, 1536, 1543, 2047
SfcI	CTRYAG	1 cut(s)	577
SfuI	TTCGAA	1 cut(s)	584
SinI	GGWCC	2 cut(s)	745, 1764
SmiMI	CAYNNNNRTG	3 cut(s)	320, 423, 753
SmlI	CTYRAG	2 cut(s)	16, 2016
SmoI	CTYRAG	2 cut(s)	16, 2016
SphI	GCATGC	1 cut(s)	2242
SsiI	CCGC	2 cut(s)	684, 1599
SspMI	CTAG	5 cut(s)	1292, 1695, 1959, 2088, 2097
StyD4I	CCNGG	1 cut(s)	2266
StyI	CCWWGG	2 cut(s)	1624, 1958
TaaI	ACNGT	8 cut(s)	284, 522, 565, 581, 868, 1325, 1333, 2001
TaiI	ACGT	2 cut(s)	1763, 2125
TaqI	TCGA	6 cut(s)	340, 584, 828, 1347, 1965, 2092
TatI	WGTACW	2 cut(s)	456, 786
TauI	GCSGC	1 cut(s)	1601
TfiI	GAWTC	6 cut(s)	650, 1344, 1412, 1519, 2226, 2287
TscAI	CASTG	7 cut(s)	100, 289, 322, 372, 477, 871, 1328
TseFI	GTSAC	3 cut(s)	124, 1756, 1796
TseI	GCWGC	5 cut(s)	383, 1475, 1556, 2117, 2195
Tsp45I	GTSAC	3 cut(s)	124, 1756, 1796
TspGWI	ACGGA	4 cut(s)	45, 136, 965, 1815
TspRI	CASTG	7 cut(s)	100, 289, 322, 372, 477, 871, 1328
VpaK11BI	GGWCC	2 cut(s)	745, 1764
XagI	CCTNNNNNAGG	1 cut(s)	1220
XapI	RAATTY	6 cut(s)	256, 612, 794, 938, 1162, 2149
XceI	RCATGY	2 cut(s)	484, 2242
XmaJI	CCTAGG	1 cut(s)	1958
XmiI	GTMKAC	1 cut(s)	353
XmnI	GAANNNNTTC	1 cut(s)	615
XspI	CTAG	5 cut(s)	1292, 1695, 1959, 2088, 2097
Zsp2I	ATGCAT	1 cut(s)	2240

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.