Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0012289

Physical Location & Seq

Genomic Coordinates Forward (+)

36666250 .. 36668556

Gene Structure 2307 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00313330.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2307 bp

ATGAGAACTGCGAACGTAAGCAGCTTCTATGGTCTTAGCAAACAAGTTGTCTATTCAATGTTCTCAAAATCTCTGTCTTCCAGTAAAACTAGGAGAGAAGTACACAAACTCCACTCACTGATCGTCACTTTAGGATTACACCAATCTGTGTTGTTCTCTGGCAAACTCATAAGCAAGTATGCCCAACTCAGAGACCCCATTTCATCCCTCTCAGTTTTCCACCAGGTTTGGCCCAAACACAATCCCTATCTATGGAACTCAATCATCAGAGCACTTATCCATAATGGGCTTCACTCAAAAGCTCTCGCCCATTACAATGAAATGCATGGAATGAATGTTGAGCCTGATAGGTATACCTTTCCTTCAGTGATCAATGCCTGTGCTGGGTTGTGTGATCTGGAAATGGGTATGGTTGTGCATCACCGTATTTTGGAGAAGGGTTTCGGCTCAGACCTCTATATATGTAATGCATTGATAGATATGTTTGCTAGATTTGGTGAACTTGGTAATGCACGTCATGTGTTCGATGAAATGCCTCAAAGAGATATTGTGTCGTGGAATAGTCTGATTTCGGGGTACAGTTCAAATGGATATTGGGAGGAAGCTTTGGAAATGTTTCGTAGATTAAGAATTGATGGGTTGTTACCGGATTGTTTTTCAATATCTAGTGTTCTCCCTGCGTGTGGAGGCTTGGTTGACGTTAGAGAGGGTCAGTTAGTTCATGCTATGGTTGAAAAGATTGGAGTGCATGCAGATGTTTTAGTAAGTAATGGGCTTCTTTCAATGTACTTCAAATTTGGTTGGTCTGAAGATGCTCAAATTTTTTTTGATGAGATGGTAGTTAGGGACTCTGTTAGTTGGAACACTGTGATTTGTGGGTACTCGCAGTTGGGGTTATTTGAAGAGGCAATCAATTTGTTCAGGGAAATGATAAAGGAATTCACACCTGATTTGCTAACAATCACATCCGTGCTCCGTGCTTGTTCACATTTACGGGACTTGGAACTTGCAAAATATGTTCATGGCTACATGAAAAGAAGTGGTTTTGAATTTGATACAATGGCGAACAATGTACTTATTGATACGTATGCAAAATGTGGAAGTCTATTAGCTTCACGGGAAGTATTTGACTACATGGAATGCAGAGATTCTGTGTCATGGAATTCTATGATCAATGGTTACTTTCTTAATGGTTGTTTTGATGAAGGGTTAAATCATTTTAAGATGATGCGGAGTAACGTGACACCTGATTCTGTGAGTTGTGTGACGATCCTGTCTGTCTATACTCAACTCAGACATGTGGACCAGGGGAAAATGATCCACTGTGATATAGTGAAACTGGGATTTGATTCAGATGTTATTGTCAACAATGTTCTTGTCGATTTTTATGCTAAATGTGGCAAAATACAAGATGCACTAATAGTATTTGACAACATGACAGCACGTGATGTTGTGACATGGAATAGCATAATTTCTGCATGCATTCATAATGAAGACTGTAGTTTAGGTTTCCGAATGATTTGTAGAATGAGAAATGAGGGAGTGATGCCTGATACGGCAACAATGCTAGGTATCTTACCAGTGTGTTCCTTACTTACTGCCAAGCAAAAAGGACAAGAGATCCATGGCTGCATTTTCAGGTTAGGATTTCATTCAGATGTTCCAGTTGGGAATGCACTAATAGAAATGTACTCTAGTTGTGGTAGCTTGGAAACCTCCATACGAGTATTCGAGCAAATGTACATAAAGGATGTGGTGACATGGACTTCGTTGATCTCTGCATATGGGACATATGGTGAAGGTGAGAAAGCATTGAGAGCTTTTGAAGAAATGGAAGCAACTGGTGTTCTTCCTGATCATCTAGCTTTTCTGGCCGTCATATATGCTTGTAGCCATTCAGGTTTGGTAGAAGACGGTCTGGCTTACTTTGACCGAATGAAGAAACGCTACAAAGTTGAGCCTAGGATGGAGCACTATGCTTGTGTAGTTGACCTCCTATCCCGCTCTGGGCTATTAGCTCAAGCCGAGGACTTTATCCATACAATGCCGATGAAGGCAGATGCAAGTATATGGGGATCTTTACTTAGTGCTTGCCGAGAAAATGGAGAAGAAAAGATAGCTGCACATGTCTCAGAGCAGATAGTTCAATTGAATTCTTATGACACGGGGTATCATGTTTTGGTGTCAAATGTATATGCAGCTTTAGGGAAGTGGGATAAAGTGAGAATGATGAGGAAATACATGAAAGATAAAGGACTCACAAAAGATCCTGGATTTAGCTGGATGGAGATTCAAAAGAAGGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

768

Amino Acids

86.66

Weight (kDa)

6.11

Isoelectric Point (pI)

37.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	83 - 128	1.6e-09	PPR repeat family
PPR_2	PF13041	181 - 228	6.8e-09	PPR repeat family
PPR	PF01535	184 - 213	8.4e-09	PPR repeat
PPR_2	PF13041	283 - 329	5.9e-10	PPR repeat family
PPR	PF01535	285 - 312	1.6e-08	PPR repeat
PPR_2	PF13041	383 - 426	7.2e-06	PPR repeat family
PPR	PF01535	385 - 412	3.9e-06	PPR repeat
PPR_2	PF13041	482 - 522	6.9e-07	PPR repeat family
PPR_2	PF13041	583 - 631	4.9e-09	PPR repeat family
PPR	PF01535	586 - 615	9.2e-06	PPR repeat
E_motif	PF20431	705 - 763	1.1e-13	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03580
fragaria_vesca	FvH4_7g07570
malus_domestica	MD02G1235200.v1.1 MD02G1235800.v1.1
prunus_persica	Prupe.2G102800_v2.0.a1 Prupe.2G102800_v2.0.a1
pyrus_communis	pycom02g20250
rosa_chinensis	RchiOBHm_Chr1g0339001 RchiOBHm_Chr1g0343101
rosa_laevigata	RLG00000029204 RLG00000029208
rosa_multiflora	Rmu_sc0017585.1_g000006
rosa_roxburghii	Rroxscaffold_4G00313330
rosa_rugosa	Rorug01G0144200.1
rosa_samantha	Rh1AG160800 Rh1BG127800 Rh1CG150300 Rh1DG164000
rosa_wichuraiana	Rw1G013420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1273
AccBSI	CCGCTC	1 cut(s)	2004
AccI	GTMKAC	1 cut(s)	353
AciI	CCGC	2 cut(s)	1231, 2002
AclWI	GGATC	5 cut(s)	1264, 1312, 1615, 2083, 2261
AcoI	YGGCCR	1 cut(s)	1872
AcsI	RAATTY	6 cut(s)	794, 819, 938, 1049, 1162, 2152
AcuI	CTGAAG	2 cut(s)	348, 828
AcvI	CACGTG	1 cut(s)	1445
AfaI	GTAC	7 cut(s)	102, 578, 788, 881, 1074, 1691, 1742
AfiI	CCNNNNNNNGG	5 cut(s)	252, 384, 430, 683, 2007
AflIII	ACRYGT	2 cut(s)	1297, 2125
AjiI	CACGTC	1 cut(s)	515
AjnI	CCWGG	3 cut(s)	222, 1305, 2269
AleI	CACNNNNGTG	1 cut(s)	968
Alw21I	GWGCWC	3 cut(s)	274, 975, 1974
Alw26I	GTCTC	2 cut(s)	186, 2134
AlwI	GGATC	5 cut(s)	1264, 1312, 1615, 2083, 2261
AoxI	GGCC	2 cut(s)	230, 1872
ApeKI	GCWGC	4 cut(s)	21, 1629, 2120, 2198
ApoI	RAATTY	6 cut(s)	794, 819, 938, 1049, 1162, 2152
ArsI	GACNNNNNNTTYG	6 cut(s)	33, 59, 65, 91, 1750, 1782
Asp700I	GAANNNNTTC	2 cut(s)	440, 615
AspA2I	CCTAGG	1 cut(s)	1961
AspS9I	GGNCC	2 cut(s)	231, 1303
AsuHPI	GGTGA	5 cut(s)	413, 509, 1768, 1808, 1814
AvaII	GGWCC	1 cut(s)	1303
AvrII	CCTAGG	1 cut(s)	1961
BarI	GAAGNNNNNNTAC	2 cut(s)	1931, 1963
BbrPI	CACGTG	1 cut(s)	1445
BbsI	GAAGAC	3 cut(s)	69, 1500, 1917
Bbv12I	GWGCWC	3 cut(s)	274, 975, 1974
BbvI	GCAGC	4 cut(s)	33, 1616, 2107, 2210
BccI	CCATC	4 cut(s)	629, 829, 1960, 2278
BceAI	ACGGC	2 cut(s)	1572, 1859
BcgI	CGANNNNNNTGC	2 cut(s)	1370, 1404
BciT130I	CCWGG	3 cut(s)	224, 1307, 2271
BclI	TGATCA	3 cut(s)	369, 1170, 1855
BcoDI	GTCTC	2 cut(s)	186, 2134
BfaI	CTAG	7 cut(s)	90, 489, 666, 1568, 1695, 1862, 1962
BfmI	CTRYAG	1 cut(s)	1498
BisI	GCNGC	4 cut(s)	22, 1630, 2121, 2199
BlnI	CCTAGG	1 cut(s)	1961
BlsI	GCNGC	4 cut(s)	23, 1631, 2122, 2200
Bme1390I	CCNGG	3 cut(s)	224, 1307, 2271
Bme18I	GGWCC	1 cut(s)	1303
BmgBI	CACGTC	1 cut(s)	515
BmgT120I	GGNCC	2 cut(s)	231, 1303
BmrFI	CCNGG	3 cut(s)	224, 1307, 2271
BmrI	ACTGGG	1 cut(s)	1349
BmsI	GCATC	6 cut(s)	427, 802, 1218, 1402, 1536, 2050
BmuI	ACTGGG	1 cut(s)	1349
BpiI	GAAGAC	3 cut(s)	69, 1500, 1917
BpuEI	CTTGAG	1 cut(s)	2004
BsaAI	YACGTR	2 cut(s)	1086, 1445
BsaI	GGTCTC	1 cut(s)	186
BsaJI	CCNNGG	4 cut(s)	1306, 1624, 1961, 2025
BsaWI	WCCGGW	1 cut(s)	646
BsaXI	ACNNNNNCTCC	4 cut(s)	93, 123, 678, 708
Bsc4I	CCNNNNNNNGG	5 cut(s)	252, 384, 430, 683, 2007
Bse1I	ACTGG	5 cut(s)	81, 1344, 1580, 1664, 1846
BseBI	CCWGG	3 cut(s)	224, 1307, 2271
BseDI	CCNNGG	4 cut(s)	1306, 1624, 1961, 2025
BseGI	GGATG	5 cut(s)	203, 965, 1756, 1971, 2289
BseLI	CCNNNNNNNGG	5 cut(s)	252, 384, 430, 683, 2007
BseMII	CTCAG	5 cut(s)	202, 225, 462, 1306, 2145
BseNI	ACTGG	5 cut(s)	81, 1344, 1580, 1664, 1846
BseXI	GCAGC	4 cut(s)	33, 1616, 2107, 2210
BseYI	CCCAGC	1 cut(s)	383
BsgI	GTGCAG	1 cut(s)	2106
BshFI	GGCC	2 cut(s)	232, 1874
BsiHKAI	GWGCWC	3 cut(s)	274, 975, 1974
BsiSI	CCGG	1 cut(s)	647
BslFI	GGGAC	3 cut(s)	860, 1010, 1801
BslI	CCNNNNNNNGG	5 cut(s)	252, 384, 430, 683, 2007
BsmAI	GTCTC	2 cut(s)	186, 2134
BsmFI	GGGAC	3 cut(s)	860, 1010, 1801
BsmI	GAATGC	3 cut(s)	1145, 1482, 1678
BsnI	GGCC	2 cut(s)	232, 1874
Bso31I	GGTCTC	1 cut(s)	186
Bsp1286I	GDGCHC	3 cut(s)	274, 975, 1974
Bsp1407I	TGTACA	1 cut(s)	1740
Bsp19I	CCATGG	1 cut(s)	1624
BspACI	CCGC	2 cut(s)	1231, 2002
BspANI	GGCC	2 cut(s)	232, 1874
BspCNI	CTCAG	5 cut(s)	201, 224, 461, 1305, 2144
BspPI	GGATC	5 cut(s)	1264, 1312, 1615, 2083, 2261
BspTNI	GGTCTC	1 cut(s)	186
BsrBI	CCGCTC	1 cut(s)	2004
BsrGI	TGTACA	1 cut(s)	1740
BsrI	ACTGG	5 cut(s)	81, 1344, 1580, 1664, 1846
BssECI	CCNNGG	4 cut(s)	1306, 1624, 1961, 2025
BssNAI	GTATAC	1 cut(s)	354
BssT1I	CCWWGG	2 cut(s)	1624, 1961
Bst1107I	GTATAC	1 cut(s)	354
Bst2UI	CCWGG	3 cut(s)	224, 1307, 2271
Bst4CI	ACNGT	6 cut(s)	425, 581, 868, 1325, 1499, 1916
Bst6I	CTCTTC	1 cut(s)	897
BstAUI	TGTACA	1 cut(s)	1740
BstBAI	YACGTR	2 cut(s)	1086, 1445
BstC8I	GCNNGC	3 cut(s)	750, 1480, 2092
BstDEI	CTNAG	7 cut(s)	35, 188, 211, 448, 1292, 2084, 2131
BstDSI	CCRYGG	1 cut(s)	1624
BstF5I	GGATG	5 cut(s)	203, 965, 1756, 1971, 2289
BstMAI	GTCTC	2 cut(s)	186, 2134
BstMWI	GCNNNNNNNGC	2 cut(s)	1817, 1871
BstNI	CCWGG	3 cut(s)	224, 1307, 2271
BstNSI	RCATGY	4 cut(s)	752, 1301, 1482, 2129
BstSCI	CCNGG	3 cut(s)	222, 1305, 2269
BstSFI	CTRYAG	1 cut(s)	1498
BstSNI	TACGTA	1 cut(s)	1086
BstV1I	GCAGC	4 cut(s)	33, 1616, 2107, 2210
BstV2I	GAAGAC	3 cut(s)	69, 1500, 1917
BstX2I	RGATCY	3 cut(s)	1620, 2075, 2266
BstYI	RGATCY	3 cut(s)	1620, 2075, 2266
BstZ17I	GTATAC	1 cut(s)	354
BsuRI	GGCC	2 cut(s)	232, 1874
BtgI	CCRYGG	1 cut(s)	1624
BtrI	CACGTC	1 cut(s)	515
BtsCI	GGATG	5 cut(s)	203, 965, 1756, 1971, 2289
BtsIMutI	CAGTG	5 cut(s)	116, 372, 864, 1321, 1587
Cac8I	GCNNGC	3 cut(s)	750, 1480, 2092
Cfr13I	GGNCC	2 cut(s)	231, 1303
CsiI	ACCWGGT	1 cut(s)	222
Csp6I	GTAC	7 cut(s)	101, 577, 787, 880, 1073, 1690, 1741
CspCI	CAANNNNNGTGG	2 cut(s)	209, 244
CviQI	GTAC	7 cut(s)	101, 577, 787, 880, 1073, 1690, 1741
DdeI	CTNAG	7 cut(s)	35, 188, 211, 448, 1292, 2084, 2131
DrdI	GACNNNNNNGTC	1 cut(s)	1273
DseDI	GACNNNNNNGTC	1 cut(s)	1273
EaeI	YGGCCR	1 cut(s)	1872
Eam1104I	CTCTTC	1 cut(s)	897
EarI	CTCTTC	1 cut(s)	897
Eco105I	TACGTA	1 cut(s)	1086
Eco130I	CCWWGG	2 cut(s)	1624, 1961
Eco31I	GGTCTC	1 cut(s)	186
Eco47I	GGWCC	1 cut(s)	1303
Eco57I	CTGAAG	2 cut(s)	348, 828
Eco72I	CACGTG	1 cut(s)	1445
EcoRI	GAATTC	3 cut(s)	938, 1162, 2152
EcoRII	CCWGG	3 cut(s)	222, 1305, 2269
EcoT14I	CCWWGG	2 cut(s)	1624, 1961
EcoT22I	ATGCAT	3 cut(s)	327, 472, 1484
ErhI	CCWWGG	2 cut(s)	1624, 1961
FaqI	GGGAC	3 cut(s)	860, 1010, 1801
FauI	CCCGC	1 cut(s)	2009
FauNDI	CATATG	2 cut(s)	1783, 1792
FbaI	TGATCA	3 cut(s)	369, 1170, 1855
FblI	GTMKAC	1 cut(s)	353
Fnu4HI	GCNGC	4 cut(s)	22, 1630, 2121, 2199
FokI	GGATG	5 cut(s)	190, 952, 1763, 1978, 2296
Fsp4HI	GCNGC	4 cut(s)	22, 1630, 2121, 2199
FspBI	CTAG	7 cut(s)	90, 489, 666, 1568, 1695, 1862, 1962
GluI	GCNGC	4 cut(s)	22, 1630, 2121, 2199
GsaI	CCCAGC	1 cut(s)	387
HaeIII	GGCC	2 cut(s)	232, 1874
HapII	CCGG	1 cut(s)	647
HincII	GTYRAC	3 cut(s)	697, 1366, 1990
HindII	GTYRAC	3 cut(s)	697, 1366, 1990
HindIII	AAGCTT	1 cut(s)	603
HinfI	GANTC	6 cut(s)	848, 1148, 1250, 1349, 2256, 2290
HpaII	CCGG	1 cut(s)	647
HphI	GGTGA	5 cut(s)	413, 509, 1768, 1808, 1814
Hpy166II	GTNNAC	8 cut(s)	103, 354, 500, 697, 986, 1303, 1366, 1990
Hpy188III	TCNNGA	2 cut(s)	398, 1853
Hpy8I	GTNNAC	8 cut(s)	103, 354, 500, 697, 986, 1303, 1366, 1990
HpyAV	CCTTC	6 cut(s)	372, 430, 1199, 1793, 2047, 2293
HpyCH4III	ACNGT	6 cut(s)	425, 581, 868, 1325, 1499, 1916
HpyCH4IV	ACGT	6 cut(s)	15, 514, 699, 1085, 1239, 1444
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1817, 1871
HpyF3I	CTNAG	7 cut(s)	35, 188, 211, 448, 1292, 2084, 2131
HpySE526I	ACGT	6 cut(s)	15, 514, 699, 1085, 1239, 1444
Ksp22I	TGATCA	3 cut(s)	369, 1170, 1855
LmnI	GCTCC	2 cut(s)	978, 1969
Lsp1109I	GCAGC	4 cut(s)	33, 1616, 2107, 2210
LweI	GCATC	6 cut(s)	427, 802, 1218, 1402, 1536, 2050
MabI	ACCWGGT	1 cut(s)	222
MaeI	CTAG	7 cut(s)	90, 489, 666, 1568, 1695, 1862, 1962
MaeII	ACGT	6 cut(s)	15, 514, 699, 1085, 1239, 1444
MaeIII	GTNAC	8 cut(s)	124, 642, 1178, 1235, 1240, 1264, 1453, 1756
MbiI	CCGCTC	1 cut(s)	2004
MboII	GAAGA	9 cut(s)	69, 821, 914, 1505, 1838, 1841, 1922, 1951, 2120
MfeI	CAATTG	1 cut(s)	2147
MflI	RGATCY	3 cut(s)	1620, 2075, 2266
MhlI	GDGCHC	3 cut(s)	274, 975, 1974
MlyI	GAGTC	2 cut(s)	842, 2250
MmeI	TCCRAC	1 cut(s)	839
Mph1103I	ATGCAT	3 cut(s)	327, 472, 1484
MroXI	GAANNNNTTC	2 cut(s)	440, 615
MseI	TTAA	4 cut(s)	626, 1188, 1211, 1221
MslI	CAYNNNNRTG	4 cut(s)	315, 753, 968, 1656
MspI	CCGG	1 cut(s)	647
MspR9I	CCNGG	3 cut(s)	224, 1307, 2271
MunI	CAATTG	1 cut(s)	2147
Mva1269I	GAATGC	3 cut(s)	1145, 1482, 1678
MvaI	CCWGG	3 cut(s)	224, 1307, 2271
MwoI	GCNNNNNNNGC	2 cut(s)	1817, 1871
NcoI	CCATGG	1 cut(s)	1624
NdeI	CATATG	2 cut(s)	1783, 1792
NmeAIII	GCCGAG	2 cut(s)	2050, 2120
NmuCI	GTSAC	5 cut(s)	124, 1240, 1264, 1453, 1756
NsiI	ATGCAT	3 cut(s)	327, 472, 1484
NspI	RCATGY	4 cut(s)	752, 1301, 1482, 2129
OliI	CACNNNNGTG	1 cut(s)	968
PaeI	GCATGC	2 cut(s)	752, 1482
PciI	ACATGT	2 cut(s)	1297, 2125
PctI	GAATGC	3 cut(s)	1145, 1482, 1678
PdmI	GAANNNNTTC	2 cut(s)	440, 615
PfeI	GAWTC	4 cut(s)	1148, 1250, 1349, 2290
PfoI	TCCNGGA	1 cut(s)	2269
PkrI	GCNGC	4 cut(s)	23, 1631, 2122, 2200
PleI	GAGTC	2 cut(s)	842, 2250
PmaCI	CACGTG	1 cut(s)	1445
PmlI	CACGTG	1 cut(s)	1445
PpsI	GAGTC	2 cut(s)	842, 2250
Ppu21I	YACGTR	2 cut(s)	1086, 1445
PscI	ACATGT	2 cut(s)	1297, 2125
Psp6I	CCWGG	3 cut(s)	222, 1305, 2269
PspCI	CACGTG	1 cut(s)	1445
PspFI	CCCAGC	1 cut(s)	383
PspGI	CCWGG	3 cut(s)	222, 1305, 2269
PspPI	GGNCC	2 cut(s)	231, 1303
PsuI	RGATCY	3 cut(s)	1620, 2075, 2266
RsaI	GTAC	7 cut(s)	102, 578, 788, 881, 1074, 1691, 1742
RsaNI	GTAC	7 cut(s)	101, 577, 787, 880, 1073, 1690, 1741
RseI	CAYNNNNRTG	4 cut(s)	315, 753, 968, 1656
SaqAI	TTAA	4 cut(s)	626, 1188, 1211, 1221
SatI	GCNGC	4 cut(s)	22, 1630, 2121, 2199
Sau96I	GGNCC	2 cut(s)	231, 1303
SchI	GAGTC	2 cut(s)	842, 2250
ScrFI	CCNGG	3 cut(s)	224, 1307, 2271
SduI	GDGCHC	3 cut(s)	274, 975, 1974
SexAI	ACCWGGT	1 cut(s)	222
SfaNI	GCATC	6 cut(s)	427, 802, 1218, 1402, 1536, 2050
SfcI	CTRYAG	1 cut(s)	1498
SinI	GGWCC	1 cut(s)	1303
SmiMI	CAYNNNNRTG	4 cut(s)	315, 753, 968, 1656
SmlI	CTYRAG	1 cut(s)	2019
SmoI	CTYRAG	1 cut(s)	2019
SnaBI	TACGTA	1 cut(s)	1086
SphI	GCATGC	2 cut(s)	752, 1482
SsiI	CCGC	2 cut(s)	1231, 2002
SspMI	CTAG	7 cut(s)	90, 489, 666, 1568, 1695, 1862, 1962
StyD4I	CCNGG	3 cut(s)	222, 1305, 2269
StyI	CCWWGG	2 cut(s)	1624, 1961
TaaI	ACNGT	6 cut(s)	425, 581, 868, 1325, 1499, 1916
TaiI	ACGT	6 cut(s)	18, 517, 702, 1088, 1242, 1447
TaqI	TCGA	3 cut(s)	525, 1380, 1731
TaqII	GACCGA	1 cut(s)	1947
TatI	WGTACW	5 cut(s)	100, 786, 1072, 1689, 1740
TfiI	GAWTC	4 cut(s)	1148, 1250, 1349, 2290
Tru1I	TTAA	4 cut(s)	626, 1188, 1211, 1221
Tru9I	TTAA	4 cut(s)	626, 1188, 1211, 1221
TscAI	CASTG	5 cut(s)	123, 372, 871, 1328, 1587
TseFI	GTSAC	5 cut(s)	124, 1240, 1264, 1453, 1756
TseI	GCWGC	4 cut(s)	21, 1629, 2120, 2198
Tsp45I	GTSAC	5 cut(s)	124, 1240, 1264, 1453, 1756
TspGWI	ACGGA	2 cut(s)	958, 965
TspRI	CASTG	5 cut(s)	123, 372, 871, 1328, 1587
VpaK11BI	GGWCC	1 cut(s)	1303
XapI	RAATTY	6 cut(s)	794, 819, 938, 1049, 1162, 2152
XceI	RCATGY	4 cut(s)	752, 1301, 1482, 2129
XmaJI	CCTAGG	1 cut(s)	1961
XmiI	GTMKAC	1 cut(s)	353
XmnI	GAANNNNTTC	2 cut(s)	440, 615
XspI	CTAG	7 cut(s)	90, 489, 666, 1568, 1695, 1862, 1962
Zsp2I	ATGCAT	3 cut(s)	327, 472, 1484

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.