Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0012289

Physical Location & Seq

Genomic Coordinates Forward (+)

34430625 .. 34432590

Gene Structure 1966 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000029204

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1839 bp

ATGTTCTCAAAATCTCTGTCTTCCAGCAAAACTAGAAGAGAAGTACACAAACTCCACTCACTGATCATCACTTCAGGATTACACCATTCTGTGTTGTTCTCTGGCAAACTCATAAGCAAGAATGCCCAACTCAAAGACCCCATTACTTCCCTCTCAGTTTTCCACCAAGTTTGGCCCAAACACAATCCCTATCTATGGAACTCAATCATCAGAGCACTTATCCATAATGGGCTTCACTCAAAAGCTCTTGACCATTACATTGAAATGCATCGAATGAATGTTCAGCCCGATAGGTATACCTTTCCTTCAGTGATCAATGCCTGTACTGGGTTGTGTGATCTGGAAATGGGTATGGTTGTGCATCACCGTATTTTGGAGAAGGGTTTCGGCTCAGACTTGTATATATGTAATGCATTGATAGATATGTATGCTAGATTTGGTGAACTTGGTAATGCACGCCATATGTTTGATGAAATGCCTCAAAGAGGTATTGCGTCGTGGAATAGTCTGATTTCGGGGTACAGTTCAAATGAATATTGGGAGGAAGCTTTGGAAATGTTTCGTAGATTAAGAATTGATGGGTTGTTACCGGATTGTTTTTTGATATCTAGTGTTCTGCCTGCGTGTGGAGGCTTGGTTGATGTTAAAGAGGGTCAGTTAGTTCATGCTATGGTTGAAAAGATTGGAGTGCATGCAGATGTTTTATTGGGGTTATTTGAAGAGGCAATCAATTTGTTCAGGGAAATGATAAAGGAATTCACACCTGATTTGCTAAAAATCACATCCGTGCTCCGTGCTTGTTCACATTTACGGGACTTGGAACTTACAAAATATGTTCCTGGCTACATGAAAAGAAGTGGTTTTGAATTTGATACAATGGCGAACAATGTTCTTATTGATACGTATGCAAAATGTGGAAGTCTATTAGCTTCACGGGAAGTATTTGACTATATGGAATGCAGAGATTCTGTGTCATGGAATTCTATGATCAATGGTTACTTTCTTAATGGTTGTTTTGATGAAGGGTTAAATCATTTTAAGATGATGCGGAGTAACATGACACCTGATTCTGTGAGTTGTGTGACGATCCTGTCTGTCTATACTCAACTCAGACATGTGGACCAGGGGAAAATGATCCACTGTGATATAGTGAAACTGGGATTTGATTCAGATGTTATTGTCAACAATGTTCTTGTCGATTATTATGCTAAATGTGGCAAAATACAAGATGCACTAATAGTATCTGACAACATGACAGCACGTGATGTTGTGACATGGAATAGCATAATTTCTGCATGCATTCATAATGAAGACTGTAGTTTAAGTTTCAGAATGATTTTTAGAATGAGAAATGAGGGAGTGATGCCTGATACGGCAACAATGTTAGGTATCTTACCAATGTGTTCCTTACTTACTGCCAAGCGAAAAGGACAAGGGATCCATGGCTGCATTTTCAGGTTAGGATTTCATTCAGATGTTCCAGTTGGGAATGCACTGATAGAAATGTACTCTAGTTGTGGTAGCTTGGAAACCTCCATACGAGTATTTGAGCAAATGTACATAAAGGATGTGGTGACATGGACTTTGTTGATCTCTGCATATGGGACATATGGTGAAGGTGAGAAAGCATTGAGAGCTTTCGAAGAAATGGAAGCAACTGGTGTTCTTCCTGATCATCTAGCTTTTCTGGCCATCATATATGCTTGTAGCCATTCAGGTTTGGTAGAAGACGGTCTGGCTTACTTTGACCGAATGAAGAAACACTACAAAGTTGAGCCTAGGATGAAGCACTATGCTTGTGTAGTTGACCTCCTATCCCGCTCTGGGCTATTAGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

613

Amino Acids

69.14

Weight (kDa)

6.36

Isoelectric Point (pI)

40.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	64 - 108	2.2e-09	PPR repeat family
PPR	PF01535	166 - 194	3.5e-07	PPR repeat
PPR	PF01535	324 - 352	3.5e-06	PPR repeat
PPR_2	PF13041	421 - 461	8.6e-06	PPR repeat family
PPR_2	PF13041	522 - 570	7.2e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012289)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G03580
fragaria_vesca	FvH4_7g07570
malus_domestica	MD02G1235200.v1.1 MD02G1235800.v1.1
prunus_persica	Prupe.2G102800_v2.0.a1 Prupe.2G102800_v2.0.a1
pyrus_communis	pycom02g20250
rosa_chinensis	RchiOBHm_Chr1g0339001 RchiOBHm_Chr1g0343101
rosa_laevigata	RLG00000029204 RLG00000029208
rosa_multiflora	Rmu_sc0017585.1_g000006
rosa_roxburghii	Rroxscaffold_4G00313330
rosa_rugosa	Rorug01G0144200.1
rosa_samantha	Rh1AG160800 Rh1BG127800 Rh1CG150300 Rh1DG164000
rosa_wichuraiana	Rw1G013420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1090
AccBSI	CCGCTC	1 cut(s)	1821
AccI	GTMKAC	1 cut(s)	296
AciI	CCGC	2 cut(s)	1048, 1819
AclWI	GGATC	4 cut(s)	1081, 1129, 1432, 1445
AcoI	YGGCCR	1 cut(s)	1689
AcsI	RAATTY	3 cut(s)	755, 866, 979
AcuI	CTGAAG	2 cut(s)	57, 291
AcvI	CACGTG	1 cut(s)	1262
AfaI	GTAC	5 cut(s)	45, 325, 521, 1508, 1559
AfiI	CCNNNNNNNGG	6 cut(s)	195, 327, 373, 485, 626, 1824
AflIII	ACRYGT	1 cut(s)	1114
AgsI	TTSAA	5 cut(s)	263, 528, 677, 719, 866
AjnI	CCWGG	2 cut(s)	838, 1122
AleI	CACNNNNGTG	1 cut(s)	785
AluBI	AGCT	7 cut(s)	245, 548, 929, 1524, 1637, 1682, 1835
AluI	AGCT	7 cut(s)	245, 548, 929, 1524, 1637, 1682, 1835
Alw21I	GWGCWC	2 cut(s)	217, 792
AlwI	GGATC	4 cut(s)	1081, 1129, 1432, 1445
AoxI	GGCC	2 cut(s)	173, 1689
ApeKI	GCWGC	1 cut(s)	1446
ApoI	RAATTY	3 cut(s)	755, 866, 979
ArsI	GACNNNNNNTTYG	3 cut(s)	34, 1567, 1599
Asp700I	GAANNNNTTC	2 cut(s)	383, 558
AspA2I	CCTAGG	1 cut(s)	1778
AspS9I	GGNCC	2 cut(s)	174, 1120
AsuHPI	GGTGA	5 cut(s)	356, 452, 1585, 1625, 1631
AsuII	TTCGAA	1 cut(s)	1641
AvaII	GGWCC	1 cut(s)	1120
AvrII	CCTAGG	1 cut(s)	1778
BalI	TGGCCA	1 cut(s)	1691
BamHI	GGATCC	1 cut(s)	1437
BarI	GAAGNNNNNNTAC	2 cut(s)	1748, 1780
BbrPI	CACGTG	1 cut(s)	1262
BbsI	GAAGAC	3 cut(s)	12, 1317, 1734
Bbv12I	GWGCWC	2 cut(s)	217, 792
BbvI	GCAGC	1 cut(s)	1433
BccI	CCATC	2 cut(s)	572, 1700
BceAI	ACGGC	1 cut(s)	1389
BcgI	CGANNNNNNTGC	2 cut(s)	1187, 1221
BciT130I	CCWGG	2 cut(s)	840, 1124
BclI	TGATCA	4 cut(s)	63, 312, 987, 1672
BfaI	CTAG	6 cut(s)	33, 432, 609, 1512, 1679, 1779
BfmI	CTRYAG	1 cut(s)	1315
BisI	GCNGC	1 cut(s)	1447
BlnI	CCTAGG	1 cut(s)	1778
BlsI	GCNGC	1 cut(s)	1448
Bme1390I	CCNGG	2 cut(s)	840, 1124
Bme18I	GGWCC	1 cut(s)	1120
BmgT120I	GGNCC	2 cut(s)	174, 1120
BmiI	GGNNCC	1 cut(s)	1439
BmrFI	CCNGG	2 cut(s)	840, 1124
BmrI	ACTGGG	2 cut(s)	336, 1166
BmsI	GCATC	5 cut(s)	277, 370, 1035, 1219, 1353
BmuI	ACTGGG	2 cut(s)	336, 1166
BpiI	GAAGAC	3 cut(s)	12, 1317, 1734
Bpu14I	TTCGAA	1 cut(s)	1641
BsaAI	YACGTR	2 cut(s)	903, 1262
BsaJI	CCNNGG	3 cut(s)	1123, 1441, 1778
BsaWI	WCCGGW	1 cut(s)	589
BsaXI	ACNNNNNCTCC	4 cut(s)	36, 66, 621, 651
Bsc4I	CCNNNNNNNGG	6 cut(s)	195, 327, 373, 485, 626, 1824
Bse1I	ACTGG	4 cut(s)	331, 1161, 1481, 1663
BseBI	CCWGG	2 cut(s)	840, 1124
BseDI	CCNNGG	3 cut(s)	1123, 1441, 1778
BseGI	GGATG	3 cut(s)	782, 1573, 1788
BseLI	CCNNNNNNNGG	6 cut(s)	195, 327, 373, 485, 626, 1824
BseMII	CTCAG	3 cut(s)	168, 405, 1123
BseNI	ACTGG	4 cut(s)	331, 1161, 1481, 1663
BseXI	GCAGC	1 cut(s)	1433
BshFI	GGCC	2 cut(s)	175, 1691
BsiHKAI	GWGCWC	2 cut(s)	217, 792
BsiSI	CCGG	1 cut(s)	590
BslFI	GGGAC	2 cut(s)	827, 1618
BslI	CCNNNNNNNGG	6 cut(s)	195, 327, 373, 485, 626, 1824
BsmFI	GGGAC	2 cut(s)	827, 1618
BsmI	GAATGC	4 cut(s)	127, 962, 1299, 1495
BsnI	GGCC	2 cut(s)	175, 1691
Bsp119I	TTCGAA	1 cut(s)	1641
Bsp1286I	GDGCHC	2 cut(s)	217, 792
Bsp1407I	TGTACA	1 cut(s)	1557
Bsp143I	GATC	9 cut(s)	63, 312, 337, 987, 1086, 1134, 1437, 1590, 1672
Bsp19I	CCATGG	1 cut(s)	1441
BspACI	CCGC	2 cut(s)	1048, 1819
BspANI	GGCC	2 cut(s)	175, 1691
BspCNI	CTCAG	3 cut(s)	167, 404, 1122
BspLI	GGNNCC	1 cut(s)	1439
BspPI	GGATC	4 cut(s)	1081, 1129, 1432, 1445
BspT104I	TTCGAA	1 cut(s)	1641
BsrBI	CCGCTC	1 cut(s)	1821
BsrGI	TGTACA	1 cut(s)	1557
BsrI	ACTGG	4 cut(s)	331, 1161, 1481, 1663
BssECI	CCNNGG	3 cut(s)	1123, 1441, 1778
BssMI	GATC	9 cut(s)	63, 312, 337, 987, 1086, 1134, 1437, 1590, 1672
BssNAI	GTATAC	1 cut(s)	297
BssT1I	CCWWGG	2 cut(s)	1441, 1778
Bst1107I	GTATAC	1 cut(s)	297
Bst2UI	CCWGG	2 cut(s)	840, 1124
Bst4CI	ACNGT	5 cut(s)	368, 524, 1142, 1316, 1733
Bst6I	CTCTTC	2 cut(s)	31, 714
BstAUI	TGTACA	1 cut(s)	1557
BstBAI	YACGTR	2 cut(s)	903, 1262
BstBI	TTCGAA	1 cut(s)	1641
BstC8I	GCNNGC	4 cut(s)	457, 621, 693, 1297
BstDEI	CTNAG	3 cut(s)	154, 391, 1109
BstDSI	CCRYGG	1 cut(s)	1441
BstENI	CCTNNNNNAGG	1 cut(s)	483
BstF5I	GGATG	3 cut(s)	782, 1573, 1788
BstKTI	GATC	9 cut(s)	66, 315, 340, 990, 1089, 1137, 1440, 1593, 1675
BstMBI	GATC	9 cut(s)	63, 312, 337, 987, 1086, 1134, 1437, 1590, 1672
BstMWI	GCNNNNNNNGC	2 cut(s)	1634, 1688
BstNI	CCWGG	2 cut(s)	840, 1124
BstNSI	RCATGY	3 cut(s)	695, 1118, 1299
BstSCI	CCNGG	2 cut(s)	838, 1122
BstSFI	CTRYAG	1 cut(s)	1315
BstSNI	TACGTA	1 cut(s)	903
BstV1I	GCAGC	1 cut(s)	1433
BstV2I	GAAGAC	3 cut(s)	12, 1317, 1734
BstX2I	RGATCY	1 cut(s)	1437
BstYI	RGATCY	1 cut(s)	1437
BstZ17I	GTATAC	1 cut(s)	297
BsuRI	GGCC	2 cut(s)	175, 1691
BtgI	CCRYGG	1 cut(s)	1441
BtsCI	GGATG	3 cut(s)	782, 1573, 1788
BtsIMutI	CAGTG	4 cut(s)	59, 315, 1138, 1493
Cac8I	GCNNGC	4 cut(s)	457, 621, 693, 1297
Cfr13I	GGNCC	2 cut(s)	174, 1120
CseI	GACGC	1 cut(s)	483
Csp6I	GTAC	5 cut(s)	44, 324, 520, 1507, 1558
CspCI	CAANNNNNGTGG	2 cut(s)	152, 187
CviQI	GTAC	5 cut(s)	44, 324, 520, 1507, 1558
DdeI	CTNAG	3 cut(s)	154, 391, 1109
DpnI	GATC	9 cut(s)	65, 314, 339, 989, 1088, 1136, 1439, 1592, 1674
DpnII	GATC	9 cut(s)	63, 312, 337, 987, 1086, 1134, 1437, 1590, 1672
DrdI	GACNNNNNNGTC	1 cut(s)	1090
DseDI	GACNNNNNNGTC	1 cut(s)	1090
EaeI	YGGCCR	1 cut(s)	1689
Eam1104I	CTCTTC	2 cut(s)	31, 714
EarI	CTCTTC	2 cut(s)	31, 714
Eco105I	TACGTA	1 cut(s)	903
Eco130I	CCWWGG	2 cut(s)	1441, 1778
Eco32I	GATATC	1 cut(s)	606
Eco47I	GGWCC	1 cut(s)	1120
Eco57I	CTGAAG	2 cut(s)	57, 291
Eco72I	CACGTG	1 cut(s)	1262
EcoNI	CCTNNNNNAGG	1 cut(s)	483
EcoRI	GAATTC	2 cut(s)	755, 979
EcoRII	CCWGG	2 cut(s)	838, 1122
EcoRV	GATATC	1 cut(s)	606
EcoT14I	CCWWGG	2 cut(s)	1441, 1778
EcoT22I	ATGCAT	3 cut(s)	270, 415, 1301
ErhI	CCWWGG	2 cut(s)	1441, 1778
FaqI	GGGAC	2 cut(s)	827, 1618
FauI	CCCGC	1 cut(s)	1826
FauNDI	CATATG	3 cut(s)	462, 1600, 1609
FbaI	TGATCA	4 cut(s)	63, 312, 987, 1672
FblI	GTMKAC	1 cut(s)	296
Fnu4HI	GCNGC	1 cut(s)	1447
FokI	GGATG	3 cut(s)	769, 1580, 1795
Fsp4HI	GCNGC	1 cut(s)	1447
FspBI	CTAG	6 cut(s)	33, 432, 609, 1512, 1679, 1779
GluI	GCNGC	1 cut(s)	1447
HaeIII	GGCC	2 cut(s)	175, 1691
HapII	CCGG	1 cut(s)	590
HgaI	GACGC	1 cut(s)	483
HincII	GTYRAC	2 cut(s)	1183, 1807
HindII	GTYRAC	2 cut(s)	1183, 1807
HindIII	AAGCTT	1 cut(s)	546
HinfI	GANTC	3 cut(s)	965, 1067, 1166
HpaII	CCGG	1 cut(s)	590
HphI	GGTGA	5 cut(s)	356, 452, 1585, 1625, 1631
Hpy166II	GTNNAC	7 cut(s)	46, 297, 443, 803, 1120, 1183, 1807
Hpy188I	TCNGA	8 cut(s)	212, 394, 510, 1112, 1171, 1246, 1331, 1474
Hpy188III	TCNNGA	4 cut(s)	75, 248, 341, 1670
Hpy8I	GTNNAC	7 cut(s)	46, 297, 443, 803, 1120, 1183, 1807
Hpy99I	CGWCG	1 cut(s)	499
HpyAV	CCTTC	4 cut(s)	315, 373, 1016, 1610
HpyCH4III	ACNGT	5 cut(s)	368, 524, 1142, 1316, 1733
HpyCH4IV	ACGT	2 cut(s)	902, 1261
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1634, 1688
HpyF3I	CTNAG	3 cut(s)	154, 391, 1109
HpySE526I	ACGT	2 cut(s)	902, 1261
Ksp22I	TGATCA	4 cut(s)	63, 312, 987, 1672
Kzo9I	GATC	9 cut(s)	63, 312, 337, 987, 1086, 1134, 1437, 1590, 1672
LmnI	GCTCC	1 cut(s)	795
Lsp1109I	GCAGC	1 cut(s)	1433
LweI	GCATC	5 cut(s)	277, 370, 1035, 1219, 1353
MaeI	CTAG	6 cut(s)	33, 432, 609, 1512, 1679, 1779
MaeII	ACGT	2 cut(s)	902, 1261
MaeIII	GTNAC	6 cut(s)	585, 995, 1052, 1081, 1270, 1573
MalI	GATC	9 cut(s)	65, 314, 339, 989, 1088, 1136, 1439, 1592, 1674
MbiI	CCGCTC	1 cut(s)	1821
MboI	GATC	9 cut(s)	63, 312, 337, 987, 1086, 1134, 1437, 1590, 1672
MboII	GAAGA	8 cut(s)	12, 48, 731, 1322, 1655, 1658, 1739, 1768
MflI	RGATCY	1 cut(s)	1437
MhlI	GDGCHC	2 cut(s)	217, 792
MlsI	TGGCCA	1 cut(s)	1691
MluCI	AATT	6 cut(s)	573, 730, 755, 866, 979, 1287
MluNI	TGGCCA	1 cut(s)	1691
Mox20I	TGGCCA	1 cut(s)	1691
Mph1103I	ATGCAT	3 cut(s)	270, 415, 1301
MroXI	GAANNNNTTC	2 cut(s)	383, 558
MscI	TGGCCA	1 cut(s)	1691
MseI	TTAA	7 cut(s)	569, 645, 1005, 1028, 1038, 1322, 1837
MslI	CAYNNNNRTG	4 cut(s)	263, 696, 785, 1473
Msp20I	TGGCCA	1 cut(s)	1691
MspI	CCGG	1 cut(s)	590
MspR9I	CCNGG	2 cut(s)	840, 1124
Mva1269I	GAATGC	4 cut(s)	127, 962, 1299, 1495
MvaI	CCWGG	2 cut(s)	840, 1124
MwoI	GCNNNNNNNGC	2 cut(s)	1634, 1688
NcoI	CCATGG	1 cut(s)	1441
NdeI	CATATG	3 cut(s)	462, 1600, 1609
NdeII	GATC	9 cut(s)	63, 312, 337, 987, 1086, 1134, 1437, 1590, 1672
NlaIV	GGNNCC	1 cut(s)	1439
NmuCI	GTSAC	3 cut(s)	1081, 1270, 1573
NsiI	ATGCAT	3 cut(s)	270, 415, 1301
NspI	RCATGY	3 cut(s)	695, 1118, 1299
NspV	TTCGAA	1 cut(s)	1641
OliI	CACNNNNGTG	1 cut(s)	785
PaeI	GCATGC	2 cut(s)	695, 1299
PciI	ACATGT	1 cut(s)	1114
PctI	GAATGC	4 cut(s)	127, 962, 1299, 1495
PdmI	GAANNNNTTC	2 cut(s)	383, 558
PfeI	GAWTC	3 cut(s)	965, 1067, 1166
PkrI	GCNGC	1 cut(s)	1448
PmaCI	CACGTG	1 cut(s)	1262
PmlI	CACGTG	1 cut(s)	1262
Ppu21I	YACGTR	2 cut(s)	903, 1262
PscI	ACATGT	1 cut(s)	1114
Psp6I	CCWGG	2 cut(s)	838, 1122
PspCI	CACGTG	1 cut(s)	1262
PspGI	CCWGG	2 cut(s)	838, 1122
PspN4I	GGNNCC	1 cut(s)	1439
PspPI	GGNCC	2 cut(s)	174, 1120
PsuI	RGATCY	1 cut(s)	1437
RsaI	GTAC	5 cut(s)	45, 325, 521, 1508, 1559
RsaNI	GTAC	5 cut(s)	44, 324, 520, 1507, 1558
RseI	CAYNNNNRTG	4 cut(s)	263, 696, 785, 1473
SaqAI	TTAA	7 cut(s)	569, 645, 1005, 1028, 1038, 1322, 1837
SatI	GCNGC	1 cut(s)	1447
Sau3AI	GATC	9 cut(s)	63, 312, 337, 987, 1086, 1134, 1437, 1590, 1672
Sau96I	GGNCC	2 cut(s)	174, 1120
ScrFI	CCNGG	2 cut(s)	840, 1124
SduI	GDGCHC	2 cut(s)	217, 792
SfaNI	GCATC	5 cut(s)	277, 370, 1035, 1219, 1353
SfcI	CTRYAG	1 cut(s)	1315
SfuI	TTCGAA	1 cut(s)	1641
SinI	GGWCC	1 cut(s)	1120
SmiMI	CAYNNNNRTG	4 cut(s)	263, 696, 785, 1473
SnaBI	TACGTA	1 cut(s)	903
SphI	GCATGC	2 cut(s)	695, 1299
Sse9I	AATT	6 cut(s)	573, 730, 755, 866, 979, 1287
SsiI	CCGC	2 cut(s)	1048, 1819
SspI	AATATT	1 cut(s)	536
SspMI	CTAG	6 cut(s)	33, 432, 609, 1512, 1679, 1779
StyD4I	CCNGG	2 cut(s)	838, 1122
StyI	CCWWGG	2 cut(s)	1441, 1778
TaaI	ACNGT	5 cut(s)	368, 524, 1142, 1316, 1733
TaiI	ACGT	2 cut(s)	905, 1264
TaqI	TCGA	3 cut(s)	271, 1197, 1641
TaqII	GACCGA	1 cut(s)	1764
TasI	AATT	6 cut(s)	573, 730, 755, 866, 979, 1287
TatI	WGTACW	4 cut(s)	43, 323, 1506, 1557
TfiI	GAWTC	3 cut(s)	965, 1067, 1166
Tru1I	TTAA	7 cut(s)	569, 645, 1005, 1028, 1038, 1322, 1837
Tru9I	TTAA	7 cut(s)	569, 645, 1005, 1028, 1038, 1322, 1837
TscAI	CASTG	4 cut(s)	66, 315, 1145, 1500
TseFI	GTSAC	3 cut(s)	1081, 1270, 1573
TseI	GCWGC	1 cut(s)	1446
Tsp45I	GTSAC	3 cut(s)	1081, 1270, 1573
TspGWI	ACGGA	2 cut(s)	775, 782
TspRI	CASTG	4 cut(s)	66, 315, 1145, 1500
VpaK11BI	GGWCC	1 cut(s)	1120
XagI	CCTNNNNNAGG	1 cut(s)	483
XapI	RAATTY	3 cut(s)	755, 866, 979
XceI	RCATGY	3 cut(s)	695, 1118, 1299
XmaJI	CCTAGG	1 cut(s)	1778
XmiI	GTMKAC	1 cut(s)	296
XmnI	GAANNNNTTC	2 cut(s)	383, 558
XspI	CTAG	6 cut(s)	33, 432, 609, 1512, 1679, 1779
Zsp2I	ATGCAT	3 cut(s)	270, 415, 1301

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.