Prupe.2G134200_v2.0.a1

Nsp1-like C-terminal region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0013006
Physical Location & Seq
Forward (+)
19215497 .. 19221593
6097 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G134200.2

Sequence Viewer

Length: 2250 bp
AATAAAAAGACCCTCTCTGAAAATGAAAGCGTTAACCCAAAAACCCCAAATTTGAAAAACCTCGGTGACACTGTTACAGAAGAGAGCAGGGAAAAGAGAGAAGAGGGAAAACAATGTCGGGCTTCCCATTCGGATCCTCCTCCGCTGCTTCTTCTCAGTCCACTACGCCTTTCTCATTCACCAACCCTCCTGCCTCTTTCCCCGCCACCTCAATCGGTTTCTCACTTGGGTCCTCCGCTTCCCCATTCGGATCCACTACCGCACAGGCCGCCACCTCCACCTCTGGGTTCTCGTTCGGATCCTCCTTCAGTGCCTCCATTTCCTCCTCCTCATCTCCCTTCCGTTTCTCCCTCGACACCGCCTCCTCCCCCTCCGCCCCCTCCGCCCCCTCCGCCCCCTCCGCCCCTGCTTTTGGGTCCTCTAACCCTAGCTCCGGCCCGGGCCCCTTCTTTCGGATCCGGAGCCTCCACCGCCACCACAGCCTCCTCTGCTGCCGCCCCTTCTTTTGGATTCGGGTTCTCAGCAGCAATCTCGGCTCCATCATCCCTGTTTGGCTCCTCGGCTTCAACTCCGCTGTTTGGTTCATCTCCATCCCAACCCCTGTTTGGCTCATCCTCATCGGCGCCCGCGCCCGCTCCCGCTTCCGCGCCCGCGCCCGTTTCCGCTTCCGCTTCTACTTTATTCGGAGCACCGTCGTCCACCGCTTCGTCCTTGTTCGGAGCAACTGTATCGGCAGCCAGTTCACCTCTGATTGGCTCCGCTTCCGCTTCTGCTTCATCTCTGTTTAGCTCAACTTCCTTCACACACAGCGCACCCTCTTCCCTGTTTGGCTCATCTTCCACAGTTTCTTCAACACCCTTGTTCAGCTCTGCTTTGTCGTCTTCAGCTTCAACCACATCCTCATTCCCAAGCTTCACGAGTTCCTCTTCAGCTTTCTCTTTCCCAACAGCCTCACCTCTTTCAAAGCCACCAACAACCTCCACACCCACCAGTGTTACTTCATCAGCAACGGCTTCAACCGCTCCAAGCTTCTCGTTCGCACCACCCACTTCCTCTGCTTCACAACCGTCTTTCGGATTCTCCAATGCCGCCTTATCAGCTGCCCCCATTTCCACCGCAAAACCCACCTCGCAGTCCTTCTCAACTCCTTCTGCTCCCTTGTTTTCGACAGTCACCACCACAAGCGCTTCTTCGACTCCAGCTGCTAGCACTACAACCCAAGCCTCTTTCTCTATGCCGAGTTTCGGTGCGACTCCTTCTACTTCTGCAGTTTCGAGTACAGTTGCAACCGCTTCAATAGCAGCGCCTGCCAGCTCAGCTGCGCCTTCCAGCACAGCAGGTTTGTTTACAGGGTTTGGAGTGTCCTCCGCAGCTGCCTCTTTAGGGACTACTGCCGCTGCTTCTTATACTGGCTTTTCCTCGCTGACAAAAGGGTCGACGCCTGCTTCCTCATCACAAGCGCAACCTAGCACCACTTTGCCTGCATTTGGTGCCACTACTTCGGCACCTGTAGCTGCAGCGACAACCAGTACAAGTACCGCTGCAATTCAGACATCAACATCACTTATTGTGGCTTCCACTAGTGGGACAACTTCAACTGTCAGCACTACAGTATCTACTGCACCAAAATTACCTTCTGAGATCACAGGGAAGACTGTGGAGGAGATCATCAAGGAGTGGAATGCTGAGCTCCAAGAACGTACTGGAAAATTCCGAAAGCAGGCCAATGCAATAGCAGACTGGGACAAGAGGATTTTGCAGAACCGTGATGTTCTTCTTAGGCTCGAGATTGAAGTGGCAAAAGTGGTTGAAACCCAAGCTAACTTGGAGCGGCAGCTAGAGTTAATCGAGACTCATCAGCAAGAGGTTGATAAGGCTTTGCAAAGCATGGAAGAAGAAGCTGAGCGTATATACAAGGACGAGCGTGGATTGATTCTTGATGATGAAGCTGCATCGACAAGAGATGCGATGTATGAGCAAGCTGAGTTTATAGAGAGAGAACTGGAGCAGGTGACAGAACAGATCAAATCAATTATTCAGACCCTAAATGCCAACCAGGGAGGAGAACTTGATACAAATGATGGGATGGCTCCATTAGATGTGGTTGTACGAATCTTAAACAATCAGCTCAGTTCTTTAATGTGGATTGATGAAAAGGCTGAAGAGTTCTCTTCGCGAATTCAGAAGCTTGCCAATCAAGGTCCTGCTGCAGATCGTGAATTAATGAGTCCAAAATACTGGATGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0003674 GO:0005102 GO:0005198 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005642 GO:0005643 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006403 GO:0006405 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007049 GO:0007154 GO:0007165 GO:0007166 GO:0007276 GO:0007283 GO:0008092 GO:0008104 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008285 GO:0008289 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010648 GO:0010928 GO:0010930 GO:0010941 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016043 GO:0016070 GO:0017038 GO:0017056 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019894 GO:0019904 GO:0019953 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030159 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032182 GO:0032386 GO:0032501 GO:0032504 GO:0032774 GO:0032879 GO:0032880 GO:0032947 GO:0032991 GO:0033036 GO:0033157 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0035257 GO:0042127 GO:0042169 GO:0042175 GO:0042306 GO:0042886 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043122 GO:0043123 GO:0043130 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044613 GO:0044703 GO:0045184 GO:0045893 GO:0045935 GO:0046483 GO:0046822 GO:0046907 GO:0046966 GO:0048232 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048609 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051223 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051259 GO:0051291 GO:0051427 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0060255 GO:0060341 GO:0060548 GO:0065003 GO:0065007 GO:0070013 GO:0070201 GO:0070206 GO:0070208 GO:0070727 GO:0071166 GO:0071426 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090087 GO:0090304 GO:0097659 GO:0098589 GO:0098805 GO:1900180 GO:1901360 GO:1901362 GO:1901576 GO:1902531 GO:1902533 GO:1902680 GO:1903506 GO:1903508 GO:1903827 GO:1904589 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
Nsp1_C Nucleoporin_FG

Protein Analysis

750

Amino Acids

76.4

Weight (kDa)

5.31

Isoelectric Point (pI)

62.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013006)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G45000
fragaria_vesca FvH4_7g10470 FvH4_7g10470 FvH4_7g10470
malus_domestica MD07G1110700.v1.1
prunus_persica Prupe.2G134200_v2.0.a1 Prupe.2G134200_v2.0.a1
pyrus_communis pycom07g09560
rosa_chinensis RchiOBHm_Chr1g0348261
rosa_laevigata RLG00000028672 RLG00000028676
rosa_roxburghii Rroxscaffold_4G00307070
rosa_rugosa Rorug01G0194000
rosa_samantha Rh1AG211000 Rh1BG177500 Rh1CG195400 Rh1DG207000
rosa_wichuraiana Rw1G017820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1999
AasI GACNNNNNNGTC 1 cut(s) 1432
Acc36I ACCTGC 2 cut(s) 1328, 1999
AccB1I GGYRCC 3 cut(s) 622, 1490, 1504
AccBSI CCGCTC 3 cut(s) 635, 1022, 1831
AccI GTMKAC 1 cut(s) 1436
AccII CGCG 4 cut(s) 629, 647, 653, 2176
AccIII TCCGGA 1 cut(s) 458
AclWI GGATC 8 cut(s) 128, 141, 245, 258, 293, 306, 450, 463
AcsI RAATTY 3 cut(s) 49, 1709, 2178
AcuI CTGAAG 4 cut(s) 291, 867, 912, 2181
AcyI GRCGYC 2 cut(s) 623, 1439
AfaI GTAC 5 cut(s) 1279, 1531, 1537, 1702, 2109
AfeI AGCGCT 1 cut(s) 1186
AhlI ACTAGT 1 cut(s) 1580
AjnI CCWGG 1 cut(s) 2055
AjuI GAANNNNNNNTTGG 2 cut(s) 1618, 1650
Alw21I GWGCWC 2 cut(s) 691, 1692
Alw26I GTCTC 1 cut(s) 1844
AlwI GGATC 8 cut(s) 128, 141, 245, 258, 293, 306, 450, 463
AlwNI CAGNNNCTG 1 cut(s) 1307
Ama87I CYCGRG 2 cut(s) 438, 1784
Aor13HI TCCGGA 1 cut(s) 458
Aor51HI AGCGCT 1 cut(s) 1186
AoxI GGCC 4 cut(s) 266, 435, 441, 1722
ApaI GGGCCC 1 cut(s) 445
ApoI RAATTY 3 cut(s) 49, 1709, 2178
AseI ATTAAT 1 cut(s) 2222
AspLEI GCGC 9 cut(s) 625, 631, 649, 655, 812, 1187, 1306, 1324, 1462
AspS9I GGNCC 6 cut(s) 230, 416, 436, 441, 442, 2201
AsuC2I CCSGG 2 cut(s) 439, 440
AsuHPI GGTGA 6 cut(s) 77, 171, 735, 945, 1165, 2023
AsuNHI GCTAGC 1 cut(s) 1205
AvaI CYCGRG 2 cut(s) 438, 1784
AvaII GGWCC 3 cut(s) 230, 416, 2201
BaeGI GKGCMC 1 cut(s) 445
BaeI ACNNNNGTAYC 2 cut(s) 1596, 1629
BamHI GGATCC 4 cut(s) 133, 250, 298, 455
BanI GGYRCC 3 cut(s) 622, 1490, 1504
BanII GRGCYC 2 cut(s) 445, 1692
BauI CACGAG 1 cut(s) 916
BbsI GAAGAC 2 cut(s) 873, 1658
Bbv12I GWGCWC 2 cut(s) 691, 1692
BccI CCATC 4 cut(s) 547, 598, 2075, 2080
BceAI ACGGC 1 cut(s) 1026
BcgI CGANNNNNNTGC 4 cut(s) 513, 547, 711, 745
BciT130I CCWGG 1 cut(s) 2057
BcnI CCSGG 2 cut(s) 439, 440
BcoDI GTCTC 1 cut(s) 1844
BcuI ACTAGT 1 cut(s) 1580
BfaI CTAG 5 cut(s) 428, 1206, 1467, 1581, 1838
BfmI CTRYAG 5 cut(s) 1266, 1509, 1515, 1608, 2208
BfoI RGCGCY 3 cut(s) 626, 1188, 1307
BfuAI ACCTGC 2 cut(s) 1328, 1999
BlpI GCTNAGC 3 cut(s) 1315, 1686, 1902
Bme1390I CCNGG 3 cut(s) 439, 440, 2057
Bme18I GGWCC 3 cut(s) 230, 416, 2201
BmeT110I CYCGRG 2 cut(s) 438, 1784
BmgT120I GGNCC 6 cut(s) 230, 416, 436, 441, 442, 2201
BmrFI CCNGG 3 cut(s) 439, 440, 2057
BmrI ACTGGG 1 cut(s) 1750
BmsI GCATC 2 cut(s) 1954, 1961
BmtI GCTAGC 1 cut(s) 1209
BmuI ACTGGG 1 cut(s) 1750
BpiI GAAGAC 2 cut(s) 873, 1658
BpmI CTGGAG 2 cut(s) 1182, 2024
Bpu1102I GCTNAGC 3 cut(s) 1315, 1686, 1902
BpuMI CCSGG 2 cut(s) 439, 440
BsaHI GRCGYC 2 cut(s) 623, 1439
BsaJI CCNNGG 4 cut(s) 61, 438, 558, 2056
BsaWI WCCGGW 1 cut(s) 458
BsaXI ACNNNNNCTCC 8 cut(s) 171, 201, 346, 376, 415, 445, 711, 741
Bse1I ACTGG 8 cut(s) 738, 990, 1414, 1527, 1708, 1745, 2007, 2243
BseAI TCCGGA 1 cut(s) 458
BseBI CCWGG 1 cut(s) 2057
BseDI CCNNGG 4 cut(s) 61, 438, 558, 2056
BseGI GGATG 6 cut(s) 542, 590, 611, 896, 2091, 2247
BseMII CTCAG 8 cut(s) 169, 534, 1329, 1629, 1677, 1893, 1974, 2143
BseNI ACTGG 8 cut(s) 738, 990, 1414, 1527, 1708, 1745, 2007, 2243
BseRI GAGGAG 8 cut(s) 129, 315, 318, 354, 475, 547, 1676, 2076
BseSI GKGCMC 1 cut(s) 445
BsgI GTGCAG 1 cut(s) 1605
Bsh1236I CGCG 4 cut(s) 629, 647, 653, 2176
BshFI GGCC 4 cut(s) 268, 437, 443, 1724
BshNI GGYRCC 3 cut(s) 622, 1490, 1504
BsiHKAI GWGCWC 2 cut(s) 691, 1692
BsiHKCI CYCGRG 2 cut(s) 438, 1784
BsiSI CCGG 3 cut(s) 434, 439, 459
BslFI GGGAC 3 cut(s) 1399, 1600, 1757
BsmAI GTCTC 1 cut(s) 1844
BsmFI GGGAC 3 cut(s) 1399, 1600, 1757
BsmI GAATGC 1 cut(s) 1687
BsnI GGCC 4 cut(s) 268, 437, 443, 1724
BsoBI CYCGRG 2 cut(s) 438, 1784
Bsp120I GGGCCC 1 cut(s) 441
Bsp1286I GDGCHC 3 cut(s) 445, 691, 1692
Bsp13I TCCGGA 1 cut(s) 458
Bsp143I GATC 8 cut(s) 133, 250, 298, 455, 1641, 1665, 2022, 2212
Bsp1720I GCTNAGC 3 cut(s) 1315, 1686, 1902
Bsp68I TCGCGA 1 cut(s) 2176
BspANI GGCC 4 cut(s) 268, 437, 443, 1724
BspCNI CTCAG 8 cut(s) 168, 533, 1328, 1630, 1678, 1894, 1975, 2142
BspEI TCCGGA 1 cut(s) 458
BspFNI CGCG 4 cut(s) 629, 647, 653, 2176
BspMAI CTGCAG 3 cut(s) 1270, 1519, 2212
BspMI ACCTGC 2 cut(s) 1328, 1999
BspOI GCTAGC 1 cut(s) 1209
BspPI GGATC 8 cut(s) 128, 141, 245, 258, 293, 306, 450, 463
BspT107I GGYRCC 3 cut(s) 622, 1490, 1504
BsrBI CCGCTC 3 cut(s) 635, 1022, 1831
BsrI ACTGG 8 cut(s) 738, 990, 1414, 1527, 1708, 1745, 2007, 2243
BssECI CCNNGG 4 cut(s) 61, 438, 558, 2056
BssMI GATC 8 cut(s) 133, 250, 298, 455, 1641, 1665, 2022, 2212
BssNI GRCGYC 2 cut(s) 623, 1439
BssSI CACGAG 1 cut(s) 916
Bst2BI CACGAG 1 cut(s) 916
Bst2UI CCWGG 1 cut(s) 2057
Bst6I CTCTTC 6 cut(s) 75, 96, 823, 931, 2157, 2176
BstACI GRCGYC 2 cut(s) 623, 1439
BstAPI GCANNNNNTGC 2 cut(s) 1307, 1490
BstDEI CTNAG 9 cut(s) 155, 520, 1315, 1638, 1686, 1778, 1902, 1983, 2129
BstF5I GGATG 6 cut(s) 542, 590, 611, 896, 2091, 2247
BstFNI CGCG 4 cut(s) 629, 647, 653, 2176
BstH2I RGCGCY 3 cut(s) 626, 1188, 1307
BstHHI GCGC 9 cut(s) 625, 631, 649, 655, 812, 1187, 1306, 1324, 1462
BstKTI GATC 8 cut(s) 136, 253, 301, 458, 1644, 1668, 2025, 2215
BstMAI GTCTC 1 cut(s) 1844
BstMBI GATC 8 cut(s) 133, 250, 298, 455, 1641, 1665, 2022, 2212
BstNI CCWGG 1 cut(s) 2057
BstSCI CCNGG 3 cut(s) 437, 438, 2055
BstSFI CTRYAG 5 cut(s) 1266, 1509, 1515, 1608, 2208
BstSLI GKGCMC 1 cut(s) 445
BstUI CGCG 4 cut(s) 629, 647, 653, 2176
BstV2I GAAGAC 2 cut(s) 873, 1658
BstX2I RGATCY 4 cut(s) 133, 250, 298, 455
BstXI CCANNNNNNTGG 1 cut(s) 2238
BstYI RGATCY 4 cut(s) 133, 250, 298, 455
BsuRI GGCC 4 cut(s) 268, 437, 443, 1724
BtgZI GCGATG 1 cut(s) 1982
BtsCI GGATG 6 cut(s) 542, 590, 611, 896, 2091, 2247
BtsIMutI CAGTG 3 cut(s) 69, 315, 997
BtuMI TCGCGA 1 cut(s) 2176
BveI ACCTGC 2 cut(s) 1328, 1999
CaiI CAGNNNCTG 1 cut(s) 1307
CfoI GCGC 9 cut(s) 625, 631, 649, 655, 812, 1187, 1306, 1324, 1462
Cfr13I GGNCC 6 cut(s) 230, 416, 436, 441, 442, 2201
Cfr9I CCCGGG 1 cut(s) 438
CseI GACGC 1 cut(s) 1447
Csp6I GTAC 5 cut(s) 1278, 1530, 1536, 1701, 2108
CviAII CATG 1 cut(s) 1888
CviQI GTAC 5 cut(s) 1278, 1530, 1536, 1701, 2108
DdeI CTNAG 9 cut(s) 155, 520, 1315, 1638, 1686, 1778, 1902, 1983, 2129
DinI GGCGCC 1 cut(s) 624
DpnI GATC 8 cut(s) 135, 252, 300, 457, 1643, 1667, 2024, 2214
DpnII GATC 8 cut(s) 133, 250, 298, 455, 1641, 1665, 2022, 2212
DrdI GACNNNNNNGTC 1 cut(s) 1432
DseDI GACNNNNNNGTC 1 cut(s) 1432
Eam1104I CTCTTC 6 cut(s) 75, 96, 823, 931, 2157, 2176
EarI CTCTTC 6 cut(s) 75, 96, 823, 931, 2157, 2176
EciI GGCGGA 4 cut(s) 363, 372, 381, 390
Ecl136II GAGCTC 1 cut(s) 1690
Eco24I GRGCYC 2 cut(s) 445, 1692
Eco47I GGWCC 3 cut(s) 230, 416, 2201
Eco47III AGCGCT 1 cut(s) 1186
Eco53kI GAGCTC 1 cut(s) 1690
Eco57I CTGAAG 4 cut(s) 291, 867, 912, 2181
Eco88I CYCGRG 2 cut(s) 438, 1784
EcoICRI GAGCTC 1 cut(s) 1690
EcoO109I RGGNCCY 4 cut(s) 230, 416, 442, 2201
EcoRI GAATTC 1 cut(s) 2178
EcoRII CCWGG 1 cut(s) 2055
EcoT38I GRGCYC 2 cut(s) 445, 1692
EgeI GGCGCC 1 cut(s) 624
EheI GGCGCC 1 cut(s) 624
FaeI CATG 1 cut(s) 1891
FaiI YATR 7 cut(s) 1235, 1407, 1889, 1910, 1912, 1974, 1991
FalI AAGNNNNNCTT 2 cut(s) 1174, 1206
FaqI GGGAC 3 cut(s) 1399, 1600, 1757
FatI CATG 1 cut(s) 1887
FauI CCCGC 5 cut(s) 210, 634, 640, 646, 658
FblI GTMKAC 1 cut(s) 1436
FokI GGATG 5 cut(s) 529, 577, 598, 883, 2098
FriOI GRGCYC 2 cut(s) 445, 1692
FspBI CTAG 5 cut(s) 428, 1206, 1467, 1581, 1838
GlaI GCGC 9 cut(s) 624, 630, 648, 654, 811, 1186, 1305, 1323, 1461
GsuI CTGGAG 2 cut(s) 1182, 2024
HaeII RGCGCY 3 cut(s) 626, 1188, 1307
HaeIII GGCC 4 cut(s) 268, 437, 443, 1724
HapII CCGG 3 cut(s) 434, 439, 459
HgaI GACGC 1 cut(s) 1447
HhaI GCGC 9 cut(s) 625, 631, 649, 655, 812, 1187, 1306, 1324, 1462
Hin1I GRCGYC 2 cut(s) 623, 1439
Hin1II CATG 1 cut(s) 1891
Hin6I GCGC 9 cut(s) 623, 629, 647, 653, 810, 1185, 1304, 1322, 1460
HinP1I GCGC 9 cut(s) 623, 629, 647, 653, 810, 1185, 1304, 1322, 1460
HincII GTYRAC 2 cut(s) 34, 1437
HindII GTYRAC 2 cut(s) 34, 1437
HindIII AAGCTT 3 cut(s) 910, 1027, 2186
HinfI GANTC 8 cut(s) 510, 1077, 1195, 1252, 1852, 1933, 2112, 2227
HpaI GTTAAC 1 cut(s) 34
HpaII CCGG 3 cut(s) 434, 439, 459
HphI GGTGA 6 cut(s) 77, 171, 735, 945, 1165, 2023
Hpy166II GTNNAC 6 cut(s) 34, 161, 699, 743, 1347, 1437
Hpy188III TCNNGA 8 cut(s) 459, 916, 1786, 1849, 1937, 2175, 2216, 2247
Hpy8I GTNNAC 6 cut(s) 34, 161, 699, 743, 1347, 1437
Hpy99I CGWCG 2 cut(s) 697, 1441
HpyCH4IV ACGT 1 cut(s) 1699
HpyF3I CTNAG 9 cut(s) 155, 520, 1315, 1638, 1686, 1778, 1902, 1983, 2129
HpySE526I ACGT 1 cut(s) 1699
Hsp92I GRCGYC 2 cut(s) 623, 1439
Hsp92II CATG 1 cut(s) 1891
HspAI GCGC 9 cut(s) 623, 629, 647, 653, 810, 1185, 1304, 1322, 1460
KasI GGCGCC 1 cut(s) 622
Kpn2I TCCGGA 1 cut(s) 458
KspAI GTTAAC 1 cut(s) 34
Kzo9I GATC 8 cut(s) 133, 250, 298, 455, 1641, 1665, 2022, 2212
LweI GCATC 2 cut(s) 1954, 1961
MaeI CTAG 5 cut(s) 428, 1206, 1467, 1581, 1838
MaeII ACGT 1 cut(s) 1699
MaeIII GTNAC 5 cut(s) 65, 73, 994, 1171, 2011
MalI GATC 8 cut(s) 135, 252, 300, 457, 1643, 1667, 2024, 2214
MbiI CCGCTC 3 cut(s) 635, 1022, 1831
MboI GATC 8 cut(s) 133, 250, 298, 455, 1641, 1665, 2022, 2212
MflI RGATCY 4 cut(s) 133, 250, 298, 455
MhlI GDGCHC 3 cut(s) 445, 691, 1692
MluCI AATT 7 cut(s) 49, 1545, 1628, 1709, 2031, 2178, 2219
Mly113I GGCGCC 1 cut(s) 623
MlyI GAGTC 4 cut(s) 1189, 1246, 1846, 2236
MroI TCCGGA 1 cut(s) 458
MseI TTAA 5 cut(s) 33, 1844, 2117, 2138, 2222
MspA1I CMGCKG 8 cut(s) 145, 574, 1100, 1202, 1319, 1373, 1397, 1541
MspI CCGG 3 cut(s) 434, 439, 459
MspR9I CCNGG 3 cut(s) 439, 440, 2057
Mva1269I GAATGC 1 cut(s) 1687
MvaI CCWGG 1 cut(s) 2057
MvnI CGCG 4 cut(s) 629, 647, 653, 2176
NarI GGCGCC 1 cut(s) 623
NciI CCSGG 2 cut(s) 439, 440
NdeII GATC 8 cut(s) 133, 250, 298, 455, 1641, 1665, 2022, 2212
NheI GCTAGC 1 cut(s) 1205
NlaIII CATG 1 cut(s) 1891
NmeAIII GCCGAG 3 cut(s) 512, 539, 1263
NmuCI GTSAC 3 cut(s) 65, 1171, 2011
NruI TCGCGA 1 cut(s) 2176
PaeR7I CTCGAG 1 cut(s) 1784
PaqCI CACCTGC 1 cut(s) 1999
PctI GAATGC 1 cut(s) 1687
PfeI GAWTC 4 cut(s) 510, 1077, 1933, 2112
PleI GAGTC 4 cut(s) 1189, 1246, 1846, 2235
PluTI GGCGCC 1 cut(s) 626
PpsI GAGTC 4 cut(s) 1189, 1246, 1846, 2235
PpuMI RGGWCCY 3 cut(s) 230, 416, 2201
PshBI ATTAAT 1 cut(s) 2222
Psp124BI GAGCTC 1 cut(s) 1692
Psp5II RGGWCCY 3 cut(s) 230, 416, 2201
Psp6I CCWGG 1 cut(s) 2055
PspGI CCWGG 1 cut(s) 2055
PspOMI GGGCCC 1 cut(s) 441
PspPI GGNCC 6 cut(s) 230, 416, 436, 441, 442, 2201
PspPPI RGGWCCY 3 cut(s) 230, 416, 2201
PstI CTGCAG 3 cut(s) 1270, 1519, 2212
PstNI CAGNNNCTG 1 cut(s) 1307
PsuI RGATCY 4 cut(s) 133, 250, 298, 455
PvuII CAGCTG 4 cut(s) 1100, 1202, 1319, 1373
RruI TCGCGA 1 cut(s) 2176
RsaI GTAC 5 cut(s) 1279, 1531, 1537, 1702, 2109
RsaNI GTAC 5 cut(s) 1278, 1530, 1536, 1701, 2108
SacI GAGCTC 1 cut(s) 1692
SalI GTCGAC 1 cut(s) 1435
SaqAI TTAA 5 cut(s) 33, 1844, 2117, 2138, 2222
Sau3AI GATC 8 cut(s) 133, 250, 298, 455, 1641, 1665, 2022, 2212
Sau96I GGNCC 6 cut(s) 230, 416, 436, 441, 442, 2201
SchI GAGTC 4 cut(s) 1189, 1246, 1846, 2236
ScrFI CCNGG 3 cut(s) 439, 440, 2057
SduI GDGCHC 3 cut(s) 445, 691, 1692
SfaNI GCATC 2 cut(s) 1954, 1961
SfcI CTRYAG 5 cut(s) 1266, 1509, 1515, 1608, 2208
SfoI GGCGCC 1 cut(s) 624
Sfr274I CTCGAG 1 cut(s) 1784
SinI GGWCC 3 cut(s) 230, 416, 2201
SlaI CTCGAG 1 cut(s) 1784
SmaI CCCGGG 1 cut(s) 440
SmlI CTYRAG 1 cut(s) 1784
SmoI CTYRAG 1 cut(s) 1784
SpeI ACTAGT 1 cut(s) 1580
SrfI GCCCGGGC 1 cut(s) 440
Sse9I AATT 7 cut(s) 49, 1545, 1628, 1709, 2031, 2178, 2219
SspDI GGCGCC 1 cut(s) 622
SspMI CTAG 5 cut(s) 428, 1206, 1467, 1581, 1838
SstI GAGCTC 1 cut(s) 1692
StyD4I CCNGG 3 cut(s) 437, 438, 2055
TaiI ACGT 1 cut(s) 1702
TaqI TCGA 8 cut(s) 353, 1166, 1193, 1274, 1436, 1785, 1848, 1955
TasI AATT 7 cut(s) 49, 1545, 1628, 1709, 2031, 2178, 2219
TatI WGTACW 2 cut(s) 1277, 1529
TauI GCSGC 5 cut(s) 271, 497, 1091, 1397, 1834
TfiI GAWTC 4 cut(s) 510, 1077, 1933, 2112
Tru1I TTAA 5 cut(s) 33, 1844, 2117, 2138, 2222
Tru9I TTAA 5 cut(s) 33, 1844, 2117, 2138, 2222
TscAI CASTG 3 cut(s) 76, 315, 997
TseFI GTSAC 3 cut(s) 65, 1171, 2011
Tsp45I GTSAC 3 cut(s) 65, 1171, 2011
TspDTI ATGAA 6 cut(s) 39, 573, 765, 990, 1959, 2166
TspGWI ACGGA 1 cut(s) 331
TspMI CCCGGG 1 cut(s) 438
TspRI CASTG 3 cut(s) 76, 315, 997
VpaK11BI GGWCC 3 cut(s) 230, 416, 2201
VspI ATTAAT 1 cut(s) 2222
XapI RAATTY 3 cut(s) 49, 1709, 2178
XcmI CCANNNNNNNNNTGG 2 cut(s) 602, 1700
XhoI CTCGAG 1 cut(s) 1784
XmaI CCCGGG 1 cut(s) 438
XmiI GTMKAC 1 cut(s) 1436
XspI CTAG 5 cut(s) 428, 1206, 1467, 1581, 1838
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.