RLG00000028676

Nsp1-like C-terminal region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0013006
Physical Location & Seq
Reverse (-)
25973230 .. 25976278
3049 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028676

Sequence Viewer

Length: 1470 bp
ATGTCGGGTTTCAATTTCGGATCCTCCGCGGCCTCCGCTTCACAATCCACTTCCCCTTTTGGAACCTCCACCCCTGCTTTCTCATTCGCCTCCTCCCCTTCCCTCTTCGGATCCTCCGCGCCCGCCACCACCTCCACCGGGTTCGGACTCAGATCCTCCCCTTTCGGTTCCGCTCCCTCAAAACCTTCCACCTCCTCCTCCCCTTTCAGCTTCTTATCCAACGCCGCCTCCTCCCCTGCTTTCGGTACCCCATCCTTATTCGGGTCAACTGCATCTGCCTCCACTTCCGGCGCTTCTAGCTCTCCTCTATTCAGCTCGGCTTCAGCTTTGTTTGGGACTACTACTTCTTCTTTCGCTCCCAGCACAGGCTCGGCTATCTTTGGCTCGTCCTCTTCATCGGCGGCGCCGCCTTCCTCCACCACTCAGAACTTGTTTGGCTCTGCTCCATCGTCCGCGGCTCCAACCACTCCCTCATTCCCAAGCTTTCTGAGCTCTTCCTCTGCAGCCTCAACCGCTCCTGCATTCCCCAGCTTTTTGAGCGCTTCTTCTGCAGCCTCAACCACTCCCACTCCCGCATTCCCATCCTTTTCGAGCTCTTCCGCTGCAGCCTCAACCACTTCTCCTTTCGCAGGCTTTTCGAGCTCTTCTTCTGCAGCTCCGGCCGCTTCCTCGTTCGCAAGCTCTTCGGGTTTCTCATCATTCTCGAGTTCAGCTTCTGCTAGGCCCACAGCAGCATCCACACCTGCTACTACTACTGTGCCTTCATCAGGCAGCAGTTTCAGCCTCTCATTTGGAGCGCCGACATCCTCGGCTTCTCAACCTTCTTTTGGATTCAGCAATGCCGCCTCATCAGCCGTTGTGGCTTCCACCGCATTGTCATTTTCAAAGTCTTCATCGCCATTGTTTTCAACCGTCACGACCACCACGGCTTCTTCAACTCCGGCTGCAAGTAGTACTACACAAGCTCCTTTCTCTTTGCCGGCTTTCAATGTGACTCCTACTGCTTCTCCTGCTGCGAGCACCACTGCACTGACTTCAACGGCAGTGCCTGCCAGCTCAGCTGCTGCTTCATCAAGCACTACTACGAGTTCCTTTATAGGTTTCTCCATAACACCTGCTTCTTCAGCGGCTACTGCTTCTTCATCTGGCCTTTCATTGTTTTCCAGTGCCTCTGTGCCCGCCTCGTCATCACAAGCACAACCAAGCACCACTCTGCCCGCATTTGGTCTCGCTACTTCAGCAACTGCAACTACAACGGCAACTGGTACCAGTACCCCTGCAGCTCAGACATCAAGTGCACTTGCTGTGGCTTCTACTAATGGGACAACCTCAAATGTTAATGGCAGCCGGGTGGAACCCCTTGAAGATGAGGGTTACATGGATAATGACGATAAGGGCAATCCTACTGCAGCCTCGATAGAGGAGGATAACTGCGGTGATATCCAAATAAAGCAGAAAAGGTTTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000278 GO:0003674 GO:0005102 GO:0005198 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005642 GO:0005643 GO:0005737 GO:0005829 GO:0006139 GO:0006351 GO:0006355 GO:0006403 GO:0006405 GO:0006606 GO:0006611 GO:0006725 GO:0006807 GO:0006810 GO:0006886 GO:0006913 GO:0007049 GO:0007154 GO:0007165 GO:0007166 GO:0007276 GO:0007283 GO:0008092 GO:0008104 GO:0008134 GO:0008150 GO:0008152 GO:0008219 GO:0008285 GO:0008289 GO:0009058 GO:0009059 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009967 GO:0009968 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010648 GO:0010928 GO:0010930 GO:0010941 GO:0012505 GO:0015031 GO:0015833 GO:0015931 GO:0016020 GO:0016043 GO:0016070 GO:0017038 GO:0017056 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019894 GO:0019904 GO:0019953 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023056 GO:0023057 GO:0030159 GO:0031090 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031503 GO:0031965 GO:0031967 GO:0031974 GO:0031975 GO:0031981 GO:0032182 GO:0032386 GO:0032501 GO:0032504 GO:0032774 GO:0032879 GO:0032880 GO:0032947 GO:0032991 GO:0033036 GO:0033157 GO:0033365 GO:0034399 GO:0034504 GO:0034613 GO:0034641 GO:0034645 GO:0034654 GO:0035257 GO:0042127 GO:0042169 GO:0042175 GO:0042306 GO:0042886 GO:0042981 GO:0043066 GO:0043067 GO:0043069 GO:0043122 GO:0043123 GO:0043130 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044425 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0044613 GO:0044703 GO:0045184 GO:0045893 GO:0045935 GO:0046483 GO:0046822 GO:0046907 GO:0046966 GO:0048232 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048609 GO:0050657 GO:0050658 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051168 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051179 GO:0051223 GO:0051234 GO:0051236 GO:0051252 GO:0051254 GO:0051259 GO:0051291 GO:0051427 GO:0051641 GO:0051649 GO:0051704 GO:0051716 GO:0060255 GO:0060341 GO:0060548 GO:0065003 GO:0065007 GO:0070013 GO:0070201 GO:0070206 GO:0070208 GO:0070727 GO:0071166 GO:0071426 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0080090 GO:0090087 GO:0090304 GO:0097659 GO:0098589 GO:0098805 GO:1900180 GO:1901360 GO:1901362 GO:1901576 GO:1902531 GO:1902533 GO:1902680 GO:1903506 GO:1903508 GO:1903827 GO:1904589 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03013 map03013
Pfam Domains
Protein Families
Nsp1_C Nucleoporin_FG

Protein Analysis

490

Amino Acids

46.76

Weight (kDa)

4.92

Isoelectric Point (pI)

65.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013006)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G45000
fragaria_vesca FvH4_7g10470 FvH4_7g10470 FvH4_7g10470
malus_domestica MD07G1110700.v1.1
prunus_persica Prupe.2G134200_v2.0.a1 Prupe.2G134200_v2.0.a1
pyrus_communis pycom07g09560
rosa_chinensis RchiOBHm_Chr1g0348261
rosa_laevigata RLG00000028672 RLG00000028676
rosa_roxburghii Rroxscaffold_4G00307070
rosa_rugosa Rorug01G0194000
rosa_samantha Rh1AG211000 Rh1BG177500 Rh1CG195400 Rh1DG207000
rosa_wichuraiana Rw1G017820

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 751, 1123
Acc36I ACCTGC 2 cut(s) 751, 1123
Acc65I GGTACC 2 cut(s) 245, 1265
AccB1I GGYRCC 3 cut(s) 245, 403, 1265
AccBSI CCGCTC 2 cut(s) 173, 515
AccII CGCG 3 cut(s) 29, 119, 455
AclWI GGATC 5 cut(s) 15, 28, 105, 118, 147
AcoI YGGCCR 1 cut(s) 660
AcuI CTGAAG 3 cut(s) 306, 1107, 1221
AcyI GRCGYC 1 cut(s) 404
AfaI GTAC 4 cut(s) 247, 955, 1267, 1273
AfeI AGCGCT 1 cut(s) 541
AfiI CCNNNNNNNGG 8 cut(s) 138, 242, 261, 365, 629, 767, 827, 1223
AgsI TTSAA 8 cut(s) 13, 885, 909, 936, 988, 1038, 1364, 1466
Alw21I GWGCWC 5 cut(s) 494, 596, 644, 1022, 1300
Alw26I GTCTC 1 cut(s) 1232
Alw44I GTGCAC 1 cut(s) 1296
AlwI GGATC 5 cut(s) 15, 28, 105, 118, 147
AlwNI CAGNNNCTG 4 cut(s) 716, 1049, 1064, 1244
Ama87I CYCGRG 1 cut(s) 703
Aor51HI AGCGCT 1 cut(s) 541
AoxI GGCC 4 cut(s) 30, 660, 722, 1147
ApaLI GTGCAC 1 cut(s) 1296
Asp718I GGTACC 2 cut(s) 245, 1265
AspLEI GCGC 5 cut(s) 121, 293, 406, 542, 799
AspS9I GGNCC 1 cut(s) 723
AsuC2I CCSGG 2 cut(s) 139, 1349
AsuHPI GGTGA 1 cut(s) 1448
AvaI CYCGRG 1 cut(s) 703
BaeGI GKGCMC 2 cut(s) 1179, 1300
BamHI GGATCC 2 cut(s) 20, 110
BanI GGYRCC 3 cut(s) 245, 403, 1265
BanII GRGCYC 3 cut(s) 494, 596, 644
BbsI GAAGAC 1 cut(s) 882
Bbv12I GWGCWC 5 cut(s) 494, 596, 644, 1022, 1300
BccI CCATC 3 cut(s) 259, 454, 589
BceAI ACGGC 4 cut(s) 839, 942, 1056, 1272
BcgI CGANNNNNNTGC 4 cut(s) 618, 652, 666, 700
BcnI CCSGG 2 cut(s) 139, 1349
BcoDI GTCTC 1 cut(s) 1232
BfaI CTAG 2 cut(s) 297, 720
BfmI CTRYAG 6 cut(s) 501, 549, 603, 651, 1278, 1407
BfoI RGCGCY 4 cut(s) 294, 407, 543, 800
BfuAI ACCTGC 2 cut(s) 751, 1123
BglI GCCNNNNNGGC 1 cut(s) 860
BlpI GCTNAGC 1 cut(s) 1057
BmcAI AGTACT 1 cut(s) 955
Bme1390I CCNGG 2 cut(s) 139, 1349
BmeT110I CYCGRG 1 cut(s) 703
BmgT120I GGNCC 1 cut(s) 723
BmiI GGNNCC 9 cut(s) 22, 64, 112, 169, 247, 405, 459, 1267, 1356
BmrFI CCNGG 2 cut(s) 139, 1349
BmsI GCATC 2 cut(s) 281, 743
BpiI GAAGAC 1 cut(s) 882
Bpu1102I GCTNAGC 1 cut(s) 1057
BpuMI CCSGG 2 cut(s) 139, 1349
BsaHI GRCGYC 1 cut(s) 404
BsaI GGTCTC 1 cut(s) 1232
BsaJI CCNNGG 4 cut(s) 27, 453, 807, 924
Bsc4I CCNNNNNNNGG 8 cut(s) 138, 242, 261, 365, 629, 767, 827, 1223
Bse118I RCCGGY 1 cut(s) 979
Bse1I ACTGG 3 cut(s) 1164, 1267, 1269
Bse3DI GCAATG 1 cut(s) 844
BseDI CCNNGG 4 cut(s) 27, 453, 807, 924
BseGI GGATG 4 cut(s) 251, 581, 734, 803
BseLI CCNNNNNNNGG 8 cut(s) 138, 242, 261, 365, 629, 767, 827, 1223
BseMI GCAATG 1 cut(s) 844
BseMII CTCAG 5 cut(s) 163, 437, 479, 1071, 1298
BseNI ACTGG 3 cut(s) 1164, 1267, 1269
BseRI GAGGAG 6 cut(s) 82, 184, 187, 220, 294, 1436
BseSI GKGCMC 2 cut(s) 1179, 1300
BseX3I CGGCCG 1 cut(s) 660
BseYI CCCAGC 2 cut(s) 359, 527
BsgI GTGCAG 1 cut(s) 1011
Bsh1236I CGCG 3 cut(s) 29, 119, 455
Bsh1285I CGRYCG 1 cut(s) 663
BshFI GGCC 4 cut(s) 32, 662, 724, 1149
BshNI GGYRCC 3 cut(s) 245, 403, 1265
BsiEI CGRYCG 1 cut(s) 663
BsiHKAI GWGCWC 5 cut(s) 494, 596, 644, 1022, 1300
BsiHKCI CYCGRG 1 cut(s) 703
BsiSI CCGG 6 cut(s) 138, 288, 659, 941, 980, 1348
BslFI GGGAC 2 cut(s) 349, 1336
BslI CCNNNNNNNGG 8 cut(s) 138, 242, 261, 365, 629, 767, 827, 1223
BsmAI GTCTC 1 cut(s) 1232
BsmFI GGGAC 2 cut(s) 349, 1336
BsmI GAATGC 2 cut(s) 521, 575
BsnI GGCC 4 cut(s) 32, 662, 724, 1149
Bso31I GGTCTC 1 cut(s) 1232
BsoBI CYCGRG 1 cut(s) 703
Bsp1286I GDGCHC 6 cut(s) 494, 596, 644, 1022, 1179, 1300
Bsp143I GATC 3 cut(s) 20, 110, 152
Bsp1720I GCTNAGC 1 cut(s) 1057
BspANI GGCC 4 cut(s) 32, 662, 724, 1149
BspCNI CTCAG 5 cut(s) 162, 436, 480, 1070, 1297
BspFNI CGCG 3 cut(s) 29, 119, 455
BspLI GGNNCC 9 cut(s) 22, 64, 112, 169, 247, 405, 459, 1267, 1356
BspMAI CTGCAG 6 cut(s) 505, 553, 607, 655, 1282, 1411
BspMI ACCTGC 2 cut(s) 751, 1123
BspPI GGATC 5 cut(s) 15, 28, 105, 118, 147
BspQI GCTCTTC 4 cut(s) 499, 601, 649, 688
BspT107I GGYRCC 3 cut(s) 245, 403, 1265
BspTNI GGTCTC 1 cut(s) 1232
BsrBI CCGCTC 2 cut(s) 173, 515
BsrDI GCAATG 1 cut(s) 844
BsrFI RCCGGY 1 cut(s) 979
BsrI ACTGG 3 cut(s) 1164, 1267, 1269
BssAI RCCGGY 1 cut(s) 979
BssECI CCNNGG 4 cut(s) 27, 453, 807, 924
BssMI GATC 3 cut(s) 20, 110, 152
BssNI GRCGYC 1 cut(s) 404
Bst4CI ACNGT 2 cut(s) 757, 913
Bst6I CTCTTC 6 cut(s) 110, 397, 499, 601, 649, 688
BstACI GRCGYC 1 cut(s) 404
BstAPI GCANNNNNTGC 1 cut(s) 1049
BstC8I GCNNGC 9 cut(s) 123, 631, 679, 981, 1018, 1050, 1054, 1179, 1218
BstDEI CTNAG 5 cut(s) 149, 423, 488, 1057, 1284
BstDSI CCRYGG 3 cut(s) 27, 453, 924
BstENI CCTNNNNNAGG 2 cut(s) 627, 765
BstF5I GGATG 4 cut(s) 251, 581, 734, 803
BstFNI CGCG 3 cut(s) 29, 119, 455
BstH2I RGCGCY 4 cut(s) 294, 407, 543, 800
BstHHI GCGC 5 cut(s) 121, 293, 406, 542, 799
BstKTI GATC 3 cut(s) 23, 113, 155
BstMAI GTCTC 1 cut(s) 1232
BstMBI GATC 3 cut(s) 20, 110, 152
BstMCI CGRYCG 1 cut(s) 663
BstSCI CCNGG 2 cut(s) 137, 1347
BstSFI CTRYAG 6 cut(s) 501, 549, 603, 651, 1278, 1407
BstSLI GKGCMC 2 cut(s) 1179, 1300
BstUI CGCG 3 cut(s) 29, 119, 455
BstV2I GAAGAC 1 cut(s) 882
BstX2I RGATCY 3 cut(s) 20, 110, 152
BstYI RGATCY 3 cut(s) 20, 110, 152
BstZI CGGCCG 1 cut(s) 660
BsuRI GGCC 4 cut(s) 32, 662, 724, 1149
BtgI CCRYGG 3 cut(s) 27, 453, 924
BtgZI GCGATG 1 cut(s) 879
BtsCI GGATG 4 cut(s) 251, 581, 734, 803
BtsI GCAGTG 2 cut(s) 1023, 1050
BtsIMutI CAGTG 4 cut(s) 1023, 1028, 1050, 1171
BveI ACCTGC 2 cut(s) 751, 1123
Cac8I GCNNGC 9 cut(s) 123, 631, 679, 981, 1018, 1050, 1054, 1179, 1218
CaiI CAGNNNCTG 4 cut(s) 716, 1049, 1064, 1244
CfoI GCGC 5 cut(s) 121, 293, 406, 542, 799
Cfr10I RCCGGY 1 cut(s) 979
Cfr13I GGNCC 1 cut(s) 723
Cfr42I CCGCGG 2 cut(s) 30, 456
Csp6I GTAC 4 cut(s) 246, 954, 1266, 1272
CviAII CATG 1 cut(s) 1378
CviQI GTAC 4 cut(s) 246, 954, 1266, 1272
DdeI CTNAG 5 cut(s) 149, 423, 488, 1057, 1284
DinI GGCGCC 1 cut(s) 405
DpnI GATC 3 cut(s) 22, 112, 154
DpnII GATC 3 cut(s) 20, 110, 152
EaeI YGGCCR 1 cut(s) 660
EagI CGGCCG 1 cut(s) 660
Eam1104I CTCTTC 6 cut(s) 110, 397, 499, 601, 649, 688
EarI CTCTTC 6 cut(s) 110, 397, 499, 601, 649, 688
Ecl136II GAGCTC 3 cut(s) 492, 594, 642
EclXI CGGCCG 1 cut(s) 660
Eco24I GRGCYC 3 cut(s) 494, 596, 644
Eco31I GGTCTC 1 cut(s) 1232
Eco32I GATATC 1 cut(s) 1441
Eco47III AGCGCT 1 cut(s) 541
Eco52I CGGCCG 1 cut(s) 660
Eco53kI GAGCTC 3 cut(s) 492, 594, 642
Eco57I CTGAAG 3 cut(s) 306, 1107, 1221
Eco88I CYCGRG 1 cut(s) 703
EcoICRI GAGCTC 3 cut(s) 492, 594, 642
EcoNI CCTNNNNNAGG 2 cut(s) 627, 765
EcoRV GATATC 1 cut(s) 1441
EcoT38I GRGCYC 3 cut(s) 494, 596, 644
EgeI GGCGCC 1 cut(s) 405
EheI GGCGCC 1 cut(s) 405
FaeI CATG 1 cut(s) 1381
FaiI YATR 3 cut(s) 1097, 1109, 1379
FaqI GGGAC 2 cut(s) 349, 1336
FatI CATG 1 cut(s) 1377
FauI CCCGC 4 cut(s) 130, 580, 1186, 1225
FokI GGATG 4 cut(s) 238, 568, 721, 790
FriOI GRGCYC 3 cut(s) 494, 596, 644
FspBI CTAG 2 cut(s) 297, 720
GlaI GCGC 5 cut(s) 120, 292, 405, 541, 798
GsaI CCCAGC 2 cut(s) 363, 531
HaeII RGCGCY 4 cut(s) 294, 407, 543, 800
HaeIII GGCC 4 cut(s) 32, 662, 724, 1149
HapII CCGG 6 cut(s) 138, 288, 659, 941, 980, 1348
HhaI GCGC 5 cut(s) 121, 293, 406, 542, 799
Hin1I GRCGYC 1 cut(s) 404
Hin1II CATG 1 cut(s) 1381
Hin6I GCGC 5 cut(s) 119, 291, 404, 540, 797
HinP1I GCGC 5 cut(s) 119, 291, 404, 540, 797
HincII GTYRAC 1 cut(s) 267
HindII GTYRAC 1 cut(s) 267
HindIII AAGCTT 1 cut(s) 481
HinfI GANTC 3 cut(s) 147, 831, 994
HpaII CCGG 6 cut(s) 138, 288, 659, 941, 980, 1348
HphI GGTGA 1 cut(s) 1448
Hpy166II GTNNAC 2 cut(s) 267, 1298
Hpy188I TCNGA 7 cut(s) 20, 110, 146, 152, 426, 489, 1287
Hpy188III TCNNGA 2 cut(s) 703, 916
Hpy8I GTNNAC 2 cut(s) 267, 1298
HpyAV CCTTC 5 cut(s) 108, 195, 420, 771, 831
HpyCH4III ACNGT 2 cut(s) 757, 913
HpyF3I CTNAG 5 cut(s) 149, 423, 488, 1057, 1284
Hsp92I GRCGYC 1 cut(s) 404
Hsp92II CATG 1 cut(s) 1381
HspAI GCGC 5 cut(s) 119, 291, 404, 540, 797
KasI GGCGCC 1 cut(s) 403
KpnI GGTACC 2 cut(s) 249, 1269
KroI GCCGGC 1 cut(s) 979
KroNI GCCGGC 1 cut(s) 981
KspI CCGCGG 2 cut(s) 30, 456
Kzo9I GATC 3 cut(s) 20, 110, 152
LguI GCTCTTC 4 cut(s) 499, 601, 649, 688
LmnI GCTCC 8 cut(s) 178, 361, 448, 463, 520, 661, 794, 970
LweI GCATC 2 cut(s) 281, 743
MaeI CTAG 2 cut(s) 297, 720
MaeIII GTNAC 3 cut(s) 913, 991, 1373
MalI GATC 3 cut(s) 22, 112, 154
MbiI CCGCTC 2 cut(s) 173, 515
MboI GATC 3 cut(s) 20, 110, 152
MflI RGATCY 3 cut(s) 20, 110, 152
MhlI GDGCHC 6 cut(s) 494, 596, 644, 1022, 1179, 1300
MluCI AATT 1 cut(s) 13
Mly113I GGCGCC 1 cut(s) 404
MlyI GAGTC 2 cut(s) 141, 988
MmeI TCCRAC 2 cut(s) 243, 485
MroNI GCCGGC 1 cut(s) 979
MseI TTAA 1 cut(s) 1338
MspA1I CMGCKG 5 cut(s) 29, 455, 602, 1061, 1127
MspI CCGG 6 cut(s) 138, 288, 659, 941, 980, 1348
MspR9I CCNGG 2 cut(s) 139, 1349
Mva1269I GAATGC 2 cut(s) 521, 575
MvnI CGCG 3 cut(s) 29, 119, 455
NaeI GCCGGC 1 cut(s) 981
NarI GGCGCC 1 cut(s) 404
NciI CCSGG 2 cut(s) 139, 1349
NdeII GATC 3 cut(s) 20, 110, 152
NgoMIV GCCGGC 1 cut(s) 979
NlaIII CATG 1 cut(s) 1381
NlaIV GGNNCC 9 cut(s) 22, 64, 112, 169, 247, 405, 459, 1267, 1356
NmeAIII GCCGAG 3 cut(s) 296, 350, 788
NmuCI GTSAC 2 cut(s) 913, 991
PaeR7I CTCGAG 1 cut(s) 703
PaqCI CACCTGC 2 cut(s) 751, 1123
PciSI GCTCTTC 4 cut(s) 499, 601, 649, 688
PctI GAATGC 2 cut(s) 521, 575
PdiI GCCGGC 1 cut(s) 981
PfeI GAWTC 1 cut(s) 831
PleI GAGTC 2 cut(s) 141, 988
PluTI GGCGCC 1 cut(s) 407
PpsI GAGTC 2 cut(s) 141, 988
Psp124BI GAGCTC 3 cut(s) 494, 596, 644
PspFI CCCAGC 2 cut(s) 359, 527
PspN4I GGNNCC 9 cut(s) 22, 64, 112, 169, 247, 405, 459, 1267, 1356
PspPI GGNCC 1 cut(s) 723
PstI CTGCAG 6 cut(s) 505, 553, 607, 655, 1282, 1411
PstNI CAGNNNCTG 4 cut(s) 716, 1049, 1064, 1244
PsuI RGATCY 3 cut(s) 20, 110, 152
PvuII CAGCTG 1 cut(s) 1061
RsaI GTAC 4 cut(s) 247, 955, 1267, 1273
RsaNI GTAC 4 cut(s) 246, 954, 1266, 1272
SacI GAGCTC 3 cut(s) 494, 596, 644
SacII CCGCGG 2 cut(s) 30, 456
SapI GCTCTTC 4 cut(s) 499, 601, 649, 688
SaqAI TTAA 1 cut(s) 1338
Sau3AI GATC 3 cut(s) 20, 110, 152
Sau96I GGNCC 1 cut(s) 723
ScaI AGTACT 1 cut(s) 955
SchI GAGTC 2 cut(s) 141, 988
ScrFI CCNGG 2 cut(s) 139, 1349
SduI GDGCHC 6 cut(s) 494, 596, 644, 1022, 1179, 1300
SfaNI GCATC 2 cut(s) 281, 743
SfcI CTRYAG 6 cut(s) 501, 549, 603, 651, 1278, 1407
SfoI GGCGCC 1 cut(s) 405
Sfr274I CTCGAG 1 cut(s) 703
Sfr303I CCGCGG 2 cut(s) 30, 456
SgrBI CCGCGG 2 cut(s) 30, 456
SlaI CTCGAG 1 cut(s) 703
SmlI CTYRAG 1 cut(s) 703
SmoI CTYRAG 1 cut(s) 703
Sse9I AATT 1 cut(s) 13
SspDI GGCGCC 1 cut(s) 403
SspMI CTAG 2 cut(s) 297, 720
SstI GAGCTC 3 cut(s) 494, 596, 644
StyD4I CCNGG 2 cut(s) 137, 1347
TaaI ACNGT 2 cut(s) 757, 913
TaqI TCGA 4 cut(s) 590, 638, 704, 1415
TasI AATT 1 cut(s) 13
TatI WGTACW 1 cut(s) 953
TauI GCSGC 8 cut(s) 32, 227, 404, 409, 458, 665, 845, 1130
TfiI GAWTC 1 cut(s) 831
Tru1I TTAA 1 cut(s) 1338
Tru9I TTAA 1 cut(s) 1338
TscAI CASTG 4 cut(s) 1030, 1035, 1050, 1171
TseFI GTSAC 2 cut(s) 913, 991
Tsp45I GTSAC 2 cut(s) 913, 991
TspDTI ATGAA 6 cut(s) 384, 753, 882, 1059, 1131, 1143
TspRI CASTG 4 cut(s) 1030, 1035, 1050, 1171
VneI GTGCAC 1 cut(s) 1296
XagI CCTNNNNNAGG 2 cut(s) 627, 765
XhoI CTCGAG 1 cut(s) 703
XspI CTAG 2 cut(s) 297, 720
ZrmI AGTACT 1 cut(s) 955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.