Prupe.2G136300_v2.0.a1

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0011387
Physical Location & Seq
Forward (+)
19385533 .. 19389100
3568 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G136300.1

Sequence Viewer

Length: 1470 bp
ATGAACCAGTGTGTTCCCAGCTGGGATCTTGATGACATTTCTACTCCACCTGCTCCTAGGCTGTCTCTTCGCTCTTCCACTCCATCTGCTGATGTCCCCATGTTGGACTATGAAGTAGCAGAGCTGACATGGGAAAACGGCCAGGTAGCCATGCACGGCTTAGGTCTGCCGCGCCCGCCGGCGAAGCCCTCATTAACCACTGCGAAGTACACCACCTGGGACAAGCCCCGGGCAAGTGGCACCCTCGAGTCAATAGTCAACCAAGCCACCTCTACTTTGCCCCTTCCCAGTAAACCCCCCTTCGATTCTTCCGGTGGCGGCTCTAATGGGGAACTAGTAAGCTGGTTTGATCACCATCGCGCTGCTGCTGTTCGTTCAACAGAAGTAACGCCCTCCACCACTATGACTATGGACGCTTTGGTTCCTTGCAGAAACCAAAGCGATAACTCAAGTAGTCATATGATGGAGTCCATGTCCATGCCTGTTGTGATTTCAGGCTCGGACGTGGTTGGGTGTTCCACTGGAGTGGAGTCCTGCAGTGGCGCTACAGGCGCCGCCACCCAGGATGACGACACCATGCTTTCAGGGAAACACGGGAGTTTGTCACGTGTCCCCGAAACACCGGAGTGGAGCAGCAGATCCCAGAGCGTGAGCGGTAGCGCAACGTTTGGGATGGACAGTCACCCTGTCACACTTGACAGTACAAAGGCAAGCGACCATGACTCCGTTTGTCACAGTAGACCACAGAGGGAGGCAGGAGATGAAGATGACAGAAAGAAACGAAGTACTGGAAAATCCTCAGTTTCTACAAAGAGGAGTAGGGCTGCTGCTATTCATAACCAATCTGAACGTAAAAGGAGAGATAAGATCAACCAAAGGATGAAGACGCTGCAGAAACTGGTCCCAAATTCCAGTAAGGGAGGATGCATGTTCAAGGCTAGTGACAAAATAAAAAGCCACTTTCAAGGTAAAATTGGCCAGCAGGTTGTTCGCTATGGGGACAACTGCCTGCTTCCACATAAATCTTCCCAAGTGACTGATAAAGCTTCAATGCTAGACGAAGTGATTGAGTATTTGAAAAATTTGCAAGCACAAATCCAAATGATAAGCAGAATGAACATGCCAGCCATGATGTTGCCAATGGCCATGCAACAGCAACTTCAAATGTCCATGATGGCCGCAGCCCCAAGAAACATGGGAATGGGAATGGGAATGGGAATGGACATGAACACTATGGTCCGCCCCAACATCCCGGGCATCTCCCCGGTTCTTCACCCGGCTGCATTCATGCCCATGGCCTCATGGGATGGCTCCGGTGGGGATAGGTCTGCTTCAGCAACAGTAATGCCTGATCCCTTGTCCGCCTTCCTTGCATGCCAATCACAGCCCATGACTATGGATGCGTACAGCATGATGGCAGCCATGTATCAGCAATTCCATCAACCGCCAGCATCTAGTTCTAAGAGCTAA

Protein Analysis

490

Amino Acids

52.77

Weight (kDa)

7.65

Isoelectric Point (pI)

56.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011387)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00050 AT4G00050 AT4G00050
fragaria_vesca FvH4_7g10840
malus_domestica MD07G1113200.v1.1
prunus_persica Prupe.2G136300_v2.0.a1 Prupe.2G136300_v2.0.a1 Prupe.2G136300_v2.0.a1
pyrus_communis pycom07g09800
rosa_chinensis RchiOBHm_Chr1g0348781
rosa_laevigata RLG00000028624
rosa_multiflora Rmu_co8207186.1_g000001 Rmu_sc0002970.1_g000013
rosa_roxburghii Rroxscaffold_4G00306600
rosa_rugosa Rorug01G0197900
rosa_samantha Rh1AG215200 Rh1BG181500 Rh1CG199600 Rh1DG211400
rosa_wichuraiana Rw1G018230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 58
Acc36I ACCTGC 2 cut(s) 58, 973
AccB1I GGYRCC 2 cut(s) 239, 551
AccBSI CCGCTC 1 cut(s) 654
AccI GTMKAC 1 cut(s) 739
AccII CGCG 2 cut(s) 172, 360
AciI CCGC 9 cut(s) 170, 176, 318, 555, 654, 1179, 1240, 1362, 1445
AclI AACGTT 1 cut(s) 665
AclWI GGATC 3 cut(s) 33, 633, 1346
AcoI YGGCCR 4 cut(s) 139, 976, 1143, 1176
AcsI RAATTY 2 cut(s) 907, 1081
AcuI CTGAAG 1 cut(s) 1317
AcvI CACGTG 1 cut(s) 608
AcyI GRCGYC 1 cut(s) 552
AfaI GTAC 4 cut(s) 209, 703, 787, 1406
AfiI CCNNNNNNNGG 1 cut(s) 103
AflIII ACRYGT 1 cut(s) 607
AgsI TTSAA 6 cut(s) 378, 934, 965, 1050, 1078, 1163
AhlI ACTAGT 1 cut(s) 334
AjiI CACGTC 1 cut(s) 505
AjnI CCWGG 3 cut(s) 141, 215, 561
AleI CACNNNNGTG 2 cut(s) 524, 625
AluBI AGCT 5 cut(s) 21, 124, 342, 1046, 1467
AluI AGCT 5 cut(s) 21, 124, 342, 1046, 1467
Alw26I GTCTC 1 cut(s) 69
AlwI GGATC 3 cut(s) 33, 633, 1346
AlwNI CAGNNNCTG 1 cut(s) 898
Ama87I CYCGRG 3 cut(s) 228, 245, 1252
AoxI GGCC 5 cut(s) 139, 976, 1143, 1176, 1296
ApeKI GCWGC 9 cut(s) 362, 365, 633, 824, 827, 889, 1181, 1280, 1418
ApoI RAATTY 2 cut(s) 907, 1081
AspA2I CCTAGG 1 cut(s) 56
AspLEI GCGC 5 cut(s) 174, 362, 545, 554, 662
AspS9I GGNCC 2 cut(s) 901, 1237
AsuC2I CCSGG 6 cut(s) 229, 230, 1253, 1254, 1265, 1277
AsuHPI GGTGA 3 cut(s) 344, 674, 1265
AvaI CYCGRG 3 cut(s) 228, 245, 1252
AvaII GGWCC 2 cut(s) 901, 1237
AvrII CCTAGG 1 cut(s) 56
BalI TGGCCA 2 cut(s) 978, 1145
BanI GGYRCC 2 cut(s) 239, 551
BbrPI CACGTG 1 cut(s) 608
BbsI GAAGAC 1 cut(s) 890
BbvI GCAGC 9 cut(s) 349, 352, 645, 811, 814, 876, 1193, 1267, 1430
BccI CCATC 8 cut(s) 91, 363, 457, 667, 1168, 1301, 1408, 1446
BceAI ACGGC 2 cut(s) 154, 172
BcgI CGANNNNNNTGC 2 cut(s) 971, 1005
BciT130I CCWGG 3 cut(s) 143, 217, 563
BclI TGATCA 1 cut(s) 349
BcnI CCSGG 6 cut(s) 229, 230, 1253, 1254, 1265, 1277
BcoDI GTCTC 1 cut(s) 69
BcuI ACTAGT 1 cut(s) 334
BfaI CTAG 5 cut(s) 57, 335, 939, 1055, 1455
BfmI CTRYAG 3 cut(s) 535, 546, 890
BfoI RGCGCY 2 cut(s) 546, 555
BfuAI ACCTGC 2 cut(s) 58, 973
BlnI CCTAGG 1 cut(s) 56
BmcAI AGTACT 1 cut(s) 787
Bme1390I CCNGG 9 cut(s) 143, 217, 229, 230, 563, 1253, 1254, 1265, 1277
Bme18I GGWCC 2 cut(s) 901, 1237
BmeT110I CYCGRG 3 cut(s) 228, 245, 1252
BmgBI CACGTC 1 cut(s) 505
BmgT120I GGNCC 2 cut(s) 901, 1237
BmiI GGNNCC 5 cut(s) 241, 423, 553, 903, 1312
BmrFI CCNGG 9 cut(s) 143, 217, 229, 230, 563, 1253, 1254, 1265, 1277
BmrI ACTGGG 1 cut(s) 282
BmsI GCATC 4 cut(s) 914, 1266, 1390, 1460
BmuI ACTGGG 1 cut(s) 282
BpiI GAAGAC 1 cut(s) 890
BpmI CTGGAG 1 cut(s) 543
Bpu10I CCTNAGC 1 cut(s) 160
BpuEI CTTGAG 1 cut(s) 433
BpuMI CCSGG 6 cut(s) 229, 230, 1253, 1254, 1265, 1277
BsaAI YACGTR 1 cut(s) 608
BsaBI GATNNNNATC 1 cut(s) 354
BsaHI GRCGYC 1 cut(s) 552
BsaJI CCNNGG 8 cut(s) 56, 216, 227, 228, 561, 1252, 1263, 1293
BsaWI WCCGGW 3 cut(s) 311, 622, 1313
BsaXI ACNNNNNCTCC 4 cut(s) 458, 488, 707, 737
Bsc4I CCNNNNNNNGG 1 cut(s) 103
Bse118I RCCGGY 1 cut(s) 178
Bse1I ACTGG 6 cut(s) 7, 288, 526, 793, 903, 912
Bse8I GATNNNNATC 1 cut(s) 354
BseBI CCWGG 3 cut(s) 143, 217, 563
BseDI CCNNGG 8 cut(s) 56, 216, 227, 228, 561, 1252, 1263, 1293
BseGI GGATG 7 cut(s) 571, 678, 885, 929, 1248, 1312, 1405
BseJI GATNNNNATC 1 cut(s) 354
BseLI CCNNNNNNNGG 1 cut(s) 103
BseMII CTCAG 1 cut(s) 813
BseNI ACTGG 6 cut(s) 7, 288, 526, 793, 903, 912
BseRI GAGGAG 1 cut(s) 829
BseXI GCAGC 9 cut(s) 349, 352, 645, 811, 814, 876, 1193, 1267, 1430
BseYI CCCAGC 2 cut(s) 17, 21
Bsh1236I CGCG 2 cut(s) 172, 360
BshFI GGCC 5 cut(s) 141, 978, 1145, 1178, 1298
BshNI GGYRCC 2 cut(s) 239, 551
BsiHKCI CYCGRG 3 cut(s) 228, 245, 1252
BsiSI CCGG 8 cut(s) 179, 229, 312, 623, 1253, 1265, 1277, 1314
BslFI GGGAC 5 cut(s) 80, 233, 596, 887, 1013
BslI CCNNNNNNNGG 1 cut(s) 103
BsmAI GTCTC 1 cut(s) 69
BsmFI GGGAC 5 cut(s) 80, 233, 596, 887, 1013
BsmI GAATGC 1 cut(s) 1283
BsnI GGCC 5 cut(s) 141, 978, 1145, 1178, 1298
BsoBI CYCGRG 3 cut(s) 228, 245, 1252
Bsp143I GATC 5 cut(s) 25, 349, 638, 867, 1351
Bsp19I CCATGG 1 cut(s) 1293
BspACI CCGC 9 cut(s) 170, 176, 318, 555, 654, 1179, 1240, 1362, 1445
BspANI GGCC 5 cut(s) 141, 978, 1145, 1178, 1298
BspCNI CTCAG 1 cut(s) 812
BspFNI CGCG 2 cut(s) 172, 360
BspLI GGNNCC 5 cut(s) 241, 423, 553, 903, 1312
BspMAI CTGCAG 2 cut(s) 539, 894
BspMI ACCTGC 2 cut(s) 58, 973
BspPI GGATC 3 cut(s) 33, 633, 1346
BspQI GCTCTTC 1 cut(s) 79
BspT107I GGYRCC 2 cut(s) 239, 551
BsrBI CCGCTC 1 cut(s) 654
BsrFI RCCGGY 1 cut(s) 178
BsrI ACTGG 6 cut(s) 7, 288, 526, 793, 903, 912
BssAI RCCGGY 1 cut(s) 178
BssECI CCNNGG 8 cut(s) 56, 216, 227, 228, 561, 1252, 1263, 1293
BssMI GATC 5 cut(s) 25, 349, 638, 867, 1351
BssNI GRCGYC 1 cut(s) 552
BssT1I CCWWGG 2 cut(s) 56, 1293
Bst2UI CCWGG 3 cut(s) 143, 217, 563
Bst4CI ACNGT 4 cut(s) 680, 701, 737, 1342
Bst6I CTCTTC 2 cut(s) 72, 79
BstACI GRCGYC 1 cut(s) 552
BstBAI YACGTR 1 cut(s) 608
BstC8I GCNNGC 9 cut(s) 176, 180, 712, 980, 1010, 1089, 1125, 1375, 1449
BstDEI CTNAG 3 cut(s) 160, 799, 1461
BstDSI CCRYGG 1 cut(s) 1293
BstF5I GGATG 7 cut(s) 571, 678, 885, 929, 1248, 1312, 1405
BstFNI CGCG 2 cut(s) 172, 360
BstH2I RGCGCY 2 cut(s) 546, 555
BstHHI GCGC 5 cut(s) 174, 362, 545, 554, 662
BstKTI GATC 5 cut(s) 28, 352, 641, 870, 1354
BstMAI GTCTC 1 cut(s) 69
BstMBI GATC 5 cut(s) 25, 349, 638, 867, 1351
BstMWI GCNNNNNNNGC 5 cut(s) 175, 184, 549, 551, 1370
BstNI CCWGG 3 cut(s) 143, 217, 563
BstNSI RCATGY 3 cut(s) 931, 1123, 1377
BstSCI CCNGG 9 cut(s) 141, 215, 227, 228, 561, 1251, 1252, 1263, 1275
BstSFI CTRYAG 3 cut(s) 535, 546, 890
BstUI CGCG 2 cut(s) 172, 360
BstV1I GCAGC 9 cut(s) 349, 352, 645, 811, 814, 876, 1193, 1267, 1430
BstV2I GAAGAC 1 cut(s) 890
BstX2I RGATCY 2 cut(s) 25, 638
BstXI CCANNNNNNTGG 2 cut(s) 526, 1396
BstYI RGATCY 2 cut(s) 25, 638
BsuRI GGCC 5 cut(s) 141, 978, 1145, 1178, 1298
BtgI CCRYGG 1 cut(s) 1293
BtgZI GCGATG 1 cut(s) 341
BtrI CACGTC 1 cut(s) 505
BtsCI GGATG 7 cut(s) 571, 678, 885, 929, 1248, 1312, 1405
BtsI GCAGTG 2 cut(s) 198, 544
BtsIMutI CAGTG 4 cut(s) 14, 198, 519, 544
BveI ACCTGC 2 cut(s) 58, 973
Cac8I GCNNGC 9 cut(s) 176, 180, 712, 980, 1010, 1089, 1125, 1375, 1449
CaiI CAGNNNCTG 1 cut(s) 898
CfoI GCGC 5 cut(s) 174, 362, 545, 554, 662
Cfr10I RCCGGY 1 cut(s) 178
Cfr13I GGNCC 2 cut(s) 901, 1237
Cfr9I CCCGGG 2 cut(s) 228, 1252
CseI GACGC 2 cut(s) 422, 895
Csp6I GTAC 4 cut(s) 208, 702, 786, 1405
CviQI GTAC 4 cut(s) 208, 702, 786, 1405
DdeI CTNAG 3 cut(s) 160, 799, 1461
DinI GGCGCC 1 cut(s) 553
DpnI GATC 5 cut(s) 27, 351, 640, 869, 1353
DpnII GATC 5 cut(s) 25, 349, 638, 867, 1351
EaeI YGGCCR 4 cut(s) 139, 976, 1143, 1176
Eam1104I CTCTTC 2 cut(s) 72, 79
EarI CTCTTC 2 cut(s) 72, 79
EciI GGCGGA 2 cut(s) 1229, 1351
Eco130I CCWWGG 2 cut(s) 56, 1293
Eco47I GGWCC 2 cut(s) 901, 1237
Eco57I CTGAAG 1 cut(s) 1317
Eco72I CACGTG 1 cut(s) 608
Eco88I CYCGRG 3 cut(s) 228, 245, 1252
EcoRII CCWGG 3 cut(s) 141, 215, 561
EcoT14I CCWWGG 2 cut(s) 56, 1293
EcoT22I ATGCAT 1 cut(s) 929
EgeI GGCGCC 1 cut(s) 553
EheI GGCGCC 1 cut(s) 553
ErhI CCWWGG 2 cut(s) 56, 1293
FaqI GGGAC 5 cut(s) 80, 233, 596, 887, 1013
FauI CCCGC 1 cut(s) 183
FauNDI CATATG 1 cut(s) 459
FbaI TGATCA 1 cut(s) 349
FblI GTMKAC 1 cut(s) 739
FokI GGATG 7 cut(s) 578, 685, 892, 936, 1235, 1319, 1412
FspBI CTAG 5 cut(s) 57, 335, 939, 1055, 1455
GlaI GCGC 5 cut(s) 173, 361, 544, 553, 661
GsaI CCCAGC 2 cut(s) 21, 25
GsuI CTGGAG 1 cut(s) 543
HaeII RGCGCY 2 cut(s) 546, 555
HaeIII GGCC 5 cut(s) 141, 978, 1145, 1178, 1298
HapII CCGG 8 cut(s) 179, 229, 312, 623, 1253, 1265, 1277, 1314
HgaI GACGC 2 cut(s) 422, 895
HhaI GCGC 5 cut(s) 174, 362, 545, 554, 662
Hin1I GRCGYC 1 cut(s) 552
Hin6I GCGC 5 cut(s) 172, 360, 543, 552, 660
HinP1I GCGC 5 cut(s) 172, 360, 543, 552, 660
HincII GTYRAC 1 cut(s) 259
HindII GTYRAC 1 cut(s) 259
HindIII AAGCTT 1 cut(s) 1044
HinfI GANTC 5 cut(s) 248, 305, 467, 530, 722
HpaII CCGG 8 cut(s) 179, 229, 312, 623, 1253, 1265, 1277, 1314
HphI GGTGA 3 cut(s) 344, 674, 1265
Hpy166II GTNNAC 4 cut(s) 210, 259, 293, 740
Hpy188I TCNGA 2 cut(s) 502, 847
Hpy188III TCNNGA 1 cut(s) 29
Hpy8I GTNNAC 4 cut(s) 210, 259, 293, 740
HpyAV CCTTC 3 cut(s) 293, 310, 1375
HpyCH4III ACNGT 4 cut(s) 680, 701, 737, 1342
HpyCH4IV ACGT 4 cut(s) 504, 607, 665, 850
HpyCH4V TGCA 9 cut(s) 154, 429, 537, 892, 927, 1087, 1150, 1283, 1373
HpyF10VI GCNNNNNNNGC 5 cut(s) 175, 184, 549, 551, 1370
HpyF3I CTNAG 3 cut(s) 160, 799, 1461
HpySE526I ACGT 4 cut(s) 504, 607, 665, 850
Hsp92I GRCGYC 1 cut(s) 552
HspAI GCGC 5 cut(s) 172, 360, 543, 552, 660
KasI GGCGCC 1 cut(s) 551
KroI GCCGGC 1 cut(s) 178
KroNI GCCGGC 1 cut(s) 180
Ksp22I TGATCA 1 cut(s) 349
Kzo9I GATC 5 cut(s) 25, 349, 638, 867, 1351
LguI GCTCTTC 1 cut(s) 79
LmnI GCTCC 3 cut(s) 58, 630, 1316
Lsp1109I GCAGC 9 cut(s) 349, 352, 645, 811, 814, 876, 1193, 1267, 1430
LweI GCATC 4 cut(s) 914, 1266, 1390, 1460
MaeI CTAG 5 cut(s) 57, 335, 939, 1055, 1455
MaeII ACGT 4 cut(s) 504, 607, 665, 850
MaeIII GTNAC 7 cut(s) 385, 603, 680, 688, 731, 941, 1033
MalI GATC 5 cut(s) 27, 351, 640, 869, 1353
MbiI CCGCTC 1 cut(s) 654
MboI GATC 5 cut(s) 25, 349, 638, 867, 1351
MboII GAAGA 7 cut(s) 59, 66, 300, 776, 895, 1017, 1262
MflI RGATCY 2 cut(s) 25, 638
MlsI TGGCCA 2 cut(s) 978, 1145
MluCI AATT 4 cut(s) 907, 972, 1081, 1433
MluNI TGGCCA 2 cut(s) 978, 1145
Mly113I GGCGCC 1 cut(s) 552
MlyI GAGTC 4 cut(s) 257, 476, 539, 716
MmeI TCCRAC 1 cut(s) 84
Mox20I TGGCCA 2 cut(s) 978, 1145
Mph1103I ATGCAT 1 cut(s) 929
MreI CGCCGGCG 1 cut(s) 178
MroNI GCCGGC 1 cut(s) 178
MscI TGGCCA 2 cut(s) 978, 1145
MseI TTAA 1 cut(s) 194
MslI CAYNNNNRTG 7 cut(s) 401, 476, 524, 625, 1199, 1292, 1394
Msp20I TGGCCA 2 cut(s) 978, 1145
MspA1I CMGCKG 1 cut(s) 21
MspI CCGG 8 cut(s) 179, 229, 312, 623, 1253, 1265, 1277, 1314
MspR9I CCNGG 9 cut(s) 143, 217, 229, 230, 563, 1253, 1254, 1265, 1277
Mva1269I GAATGC 1 cut(s) 1283
MvaI CCWGG 3 cut(s) 143, 217, 563
MvnI CGCG 2 cut(s) 172, 360
MwoI GCNNNNNNNGC 5 cut(s) 175, 184, 549, 551, 1370
NaeI GCCGGC 1 cut(s) 180
NarI GGCGCC 1 cut(s) 552
NciI CCSGG 6 cut(s) 229, 230, 1253, 1254, 1265, 1277
NcoI CCATGG 1 cut(s) 1293
NdeI CATATG 1 cut(s) 459
NdeII GATC 5 cut(s) 25, 349, 638, 867, 1351
NgoMIV GCCGGC 1 cut(s) 178
NlaIV GGNNCC 5 cut(s) 241, 423, 553, 903, 1312
NmuCI GTSAC 6 cut(s) 603, 680, 688, 731, 941, 1033
NsiI ATGCAT 1 cut(s) 929
NspI RCATGY 3 cut(s) 931, 1123, 1377
OliI CACNNNNGTG 2 cut(s) 524, 625
PaeI GCATGC 1 cut(s) 1377
PaeR7I CTCGAG 1 cut(s) 245
PaqCI CACCTGC 1 cut(s) 58
PciSI GCTCTTC 1 cut(s) 79
PctI GAATGC 1 cut(s) 1283
PdiI GCCGGC 1 cut(s) 180
PfeI GAWTC 1 cut(s) 305
PleI GAGTC 4 cut(s) 256, 475, 538, 716
PluTI GGCGCC 1 cut(s) 555
PmaCI CACGTG 1 cut(s) 608
PmlI CACGTG 1 cut(s) 608
PpsI GAGTC 4 cut(s) 256, 475, 538, 716
Ppu21I YACGTR 1 cut(s) 608
Psp1406I AACGTT 1 cut(s) 665
Psp6I CCWGG 3 cut(s) 141, 215, 561
PspCI CACGTG 1 cut(s) 608
PspFI CCCAGC 2 cut(s) 17, 21
PspGI CCWGG 3 cut(s) 141, 215, 561
PspN4I GGNNCC 5 cut(s) 241, 423, 553, 903, 1312
PspPI GGNCC 2 cut(s) 901, 1237
PspXI VCTCGAGB 1 cut(s) 245
PstI CTGCAG 2 cut(s) 539, 894
PstNI CAGNNNCTG 1 cut(s) 898
PsuI RGATCY 2 cut(s) 25, 638
PvuII CAGCTG 1 cut(s) 21
RsaI GTAC 4 cut(s) 209, 703, 787, 1406
RsaNI GTAC 4 cut(s) 208, 702, 786, 1405
RseI CAYNNNNRTG 7 cut(s) 401, 476, 524, 625, 1199, 1292, 1394
SapI GCTCTTC 1 cut(s) 79
SaqAI TTAA 1 cut(s) 194
Sau3AI GATC 5 cut(s) 25, 349, 638, 867, 1351
Sau96I GGNCC 2 cut(s) 901, 1237
ScaI AGTACT 1 cut(s) 787
SchI GAGTC 4 cut(s) 257, 476, 539, 716
ScrFI CCNGG 9 cut(s) 143, 217, 229, 230, 563, 1253, 1254, 1265, 1277
SfaNI GCATC 4 cut(s) 914, 1266, 1390, 1460
SfcI CTRYAG 3 cut(s) 535, 546, 890
SfoI GGCGCC 1 cut(s) 553
Sfr274I CTCGAG 1 cut(s) 245
SgrAI CRCCGGYG 1 cut(s) 178
SinI GGWCC 2 cut(s) 901, 1237
SlaI CTCGAG 1 cut(s) 245
SmaI CCCGGG 2 cut(s) 230, 1254
SmiMI CAYNNNNRTG 7 cut(s) 401, 476, 524, 625, 1199, 1292, 1394
SmlI CTYRAG 2 cut(s) 245, 448
SmoI CTYRAG 2 cut(s) 245, 448
SpeI ACTAGT 1 cut(s) 334
SphI GCATGC 1 cut(s) 1377
Sse9I AATT 4 cut(s) 907, 972, 1081, 1433
SsiI CCGC 9 cut(s) 170, 176, 318, 555, 654, 1179, 1240, 1362, 1445
SspDI GGCGCC 1 cut(s) 551
SspMI CTAG 5 cut(s) 57, 335, 939, 1055, 1455
StyD4I CCNGG 9 cut(s) 141, 215, 227, 228, 561, 1251, 1252, 1263, 1275
StyI CCWWGG 2 cut(s) 56, 1293
TaaI ACNGT 4 cut(s) 680, 701, 737, 1342
TaiI ACGT 4 cut(s) 507, 610, 668, 853
TaqI TCGA 2 cut(s) 246, 303
TasI AATT 4 cut(s) 907, 972, 1081, 1433
TatI WGTACW 3 cut(s) 207, 701, 785
TauI GCSGC 4 cut(s) 172, 321, 557, 1181
TfiI GAWTC 1 cut(s) 305
Tru1I TTAA 1 cut(s) 194
Tru9I TTAA 1 cut(s) 194
TscAI CASTG 4 cut(s) 14, 205, 526, 544
TseFI GTSAC 6 cut(s) 603, 680, 688, 731, 941, 1033
TseI GCWGC 9 cut(s) 362, 365, 633, 824, 827, 889, 1181, 1280, 1418
Tsp45I GTSAC 6 cut(s) 603, 680, 688, 731, 941, 1033
TspDTI ATGAA 8 cut(s) 17, 126, 777, 824, 896, 1130, 1241, 1276
TspGWI ACGGA 1 cut(s) 715
TspMI CCCGGG 2 cut(s) 228, 1252
TspRI CASTG 4 cut(s) 14, 205, 526, 544
VpaK11BI GGWCC 2 cut(s) 901, 1237
XapI RAATTY 2 cut(s) 907, 1081
XceI RCATGY 3 cut(s) 931, 1123, 1377
XcmI CCANNNNNNNNNTGG 1 cut(s) 406
XhoI CTCGAG 1 cut(s) 245
XmaI CCCGGG 2 cut(s) 228, 1252
XmaJI CCTAGG 1 cut(s) 56
XmiI GTMKAC 1 cut(s) 739
XspI CTAG 5 cut(s) 57, 335, 939, 1055, 1455
ZrmI AGTACT 1 cut(s) 787
Zsp2I ATGCAT 1 cut(s) 929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.