Rw1G018230

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0011387
Physical Location & Seq
Forward (+)
40025179 .. 40028285
3107 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G018230.1

Sequence Viewer

Length: 1305 bp
ATGAGCCAGTGTGTTCCCAGCTGGGATCTGGATGACAGTAGTCCACCGCCGAGGCTCTCTCTTCGTTCTCACTCCAATTCCACCTCTCCTGATGTTCCCATGTTCGACTATGAAGTAGCAGAGCTGACATGGGAAAATGGCCAGGTGGCCATGCACGGCTTGGGTCTACCGCGCTTGCTTTCCAAACCTGCATCCTGGGACAAGCCACGCGCTACTGGTACTCTGGAGTCCATAGTCAACCAAGCCACCTGTACTTTGCCTCGGTTTTCCAAGCCTCCCTTTGATAACACCATCACTTCTGCCACTGGCGGTGGTGCTAACAAAGTAGTGACCTGGTTCGATCATCACTGTCGTGTTGCCACCTCCGGTGCTCCCTCCAACACCATGACCATGGACGCGTTGGTCCCTTGCAGGAACAACCAACCTGATGAACCAAACAGTAGCCTTATGATAGACTCTGTAGATACCGTGCCAGGAGTGCTCGGCAGTTCTGGCACGGGTGTGATCAATGGGCGCTCCACTCGAGTGGGGTCGTGCAGCGCTACCGCGACCCACAACGAGGACACCCGCCGACTGGGAAAACACAAGGCGGGCGTTGCACGTGTACCTGCTACACCCGAGTGCAGATCCCCCAGCGTGAGCGGTAGTGCCACGTTTGGGATGGATAGCCAGCAAGCCACACTTGATACTAAGGGAAGCGACCGTGACTCAGTTTGTCACAGCAGACCACAGAGAGAGGAAAGCGACGAGGAGGAAAGAAAGAAGCGAAGTACTGGAAAATCCTCAGTTTCTACAAAAAGGAGTAGGGCTGCTGCTATACATAACCAATCTGAACGTAAAAGGAGAGATAAGATCAACCAGAGGATGAAGACGCTGCAGAAGCTGGTCCCAAATTCCAGTAAGACTGATAAAGCTTCAATGCTGGACGAAGTGATTGAATACTTGAAACAATTGCAAGCTCAAGTCCATGTGATAAGCAGAATGAACATGCCAGCCATGATGTTGCCTATGGCTATGCAGCAACAACTTCAAATGTCTATGATGGCCCCAAGAAATATGGGCATGGGGATTGGGATGGGAATGGGAATGGGAATGGGAATGGACATGAACAACATCGGCCGCCCCAACATAGGGGGAGTCCCTCCGGTTCTTCACCCAACTGCATTCATGCCCATGGCTTCATGGGATGGCTCTGCCTGCGGCGCTGAGAGGTTACAAGCTGCTTCAACGACTGTGATGCCTGATCCCTTGCCAGCATTTCTTGCATGCCAATCGCAGGTAAGGTTTAATATCCGTGCATCGTAG

Protein Analysis

434

Amino Acids

46.95

Weight (kDa)

9.07

Isoelectric Point (pI)

63.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 274 - 319 4.1e-14 Helix-loop-helix DNA-binding domain
bHLH_SAC51 PF23173 277 - 324 1.8e-08 Transcription factor SAC51 bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011387)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00050 AT4G00050 AT4G00050
fragaria_vesca FvH4_7g10840
malus_domestica MD07G1113200.v1.1
prunus_persica Prupe.2G136300_v2.0.a1 Prupe.2G136300_v2.0.a1 Prupe.2G136300_v2.0.a1
pyrus_communis pycom07g09800
rosa_chinensis RchiOBHm_Chr1g0348781
rosa_laevigata RLG00000028624
rosa_multiflora Rmu_co8207186.1_g000001 Rmu_sc0002970.1_g000013
rosa_roxburghii Rroxscaffold_4G00306600
rosa_rugosa Rorug01G0197900
rosa_samantha Rh1AG215200 Rh1BG181500 Rh1CG199600 Rh1DG211400
rosa_wichuraiana Rw1G018230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 401
Acc36I ACCTGC 3 cut(s) 196, 616, 1267
AccBSI CCGCTC 1 cut(s) 642
AccI GTMKAC 1 cut(s) 166
AccII CGCG 4 cut(s) 172, 210, 398, 548
AciI CCGC 9 cut(s) 47, 170, 309, 546, 568, 590, 642, 1120, 1200
AclWI GGATC 3 cut(s) 33, 621, 1238
AcoI YGGCCR 3 cut(s) 139, 147, 1117
AcsI RAATTY 1 cut(s) 892
AcvI CACGTG 1 cut(s) 602
AfaI GTAC 4 cut(s) 220, 253, 606, 772
AfeI AGCGCT 1 cut(s) 541
AfiI CCNNNNNNNGG 6 cut(s) 559, 574, 657, 1130, 1131, 1276
AflIII ACRYGT 2 cut(s) 396, 601
AgsI TTSAA 5 cut(s) 918, 938, 946, 1031, 1227
AjnI CCWGG 4 cut(s) 141, 194, 332, 472
AleI CACNNNNGTG 4 cut(s) 351, 500, 524, 619
AluBI AGCT 6 cut(s) 21, 124, 883, 914, 959, 1220
AluI AGCT 6 cut(s) 21, 124, 883, 914, 959, 1220
Alw21I GWGCWC 2 cut(s) 373, 483
AlwI GGATC 3 cut(s) 33, 621, 1238
AlwNI CAGNNNCTG 1 cut(s) 883
Ama87I CYCGRG 2 cut(s) 522, 617
Aor51HI AGCGCT 1 cut(s) 541
AoxI GGCC 4 cut(s) 139, 147, 1044, 1117
ApeKI GCWGC 6 cut(s) 537, 809, 812, 874, 1018, 1220
ApoI RAATTY 1 cut(s) 892
AspLEI GCGC 5 cut(s) 174, 212, 516, 542, 1205
AspS9I GGNCC 3 cut(s) 403, 886, 1045
AsuHPI GGTGA 1 cut(s) 1145
AvaI CYCGRG 2 cut(s) 522, 617
AvaII GGWCC 2 cut(s) 403, 886
BalI TGGCCA 2 cut(s) 141, 149
BbrPI CACGTG 1 cut(s) 602
BbsI GAAGAC 1 cut(s) 875
Bbv12I GWGCWC 2 cut(s) 373, 483
BbvI GCAGC 6 cut(s) 549, 796, 799, 861, 1030, 1207
BccI CCATC 5 cut(s) 299, 655, 1036, 1069, 1181
BceAI ACGGC 1 cut(s) 172
BcgI CGANNNNNNTGC 4 cut(s) 1219, 1253, 1254, 1288
BciT130I CCWGG 4 cut(s) 143, 196, 334, 474
BclI TGATCA 1 cut(s) 504
BfmI CTRYAG 2 cut(s) 459, 875
BfoI RGCGCY 3 cut(s) 517, 543, 1206
BfuAI ACCTGC 3 cut(s) 196, 616, 1267
BisI GCNGC 8 cut(s) 538, 810, 813, 875, 1019, 1120, 1201, 1221
BlsI GCNGC 8 cut(s) 539, 811, 814, 876, 1020, 1121, 1202, 1222
BmcAI AGTACT 1 cut(s) 772
Bme1390I CCNGG 4 cut(s) 143, 196, 334, 474
Bme18I GGWCC 2 cut(s) 403, 886
BmeT110I CYCGRG 2 cut(s) 522, 617
BmgT120I GGNCC 3 cut(s) 403, 886, 1045
BmiI GGNNCC 3 cut(s) 405, 888, 1047
BmrFI CCNGG 4 cut(s) 143, 196, 334, 474
BmrI ACTGGG 1 cut(s) 584
BmsI GCATC 2 cut(s) 200, 1227
BmuI ACTGGG 1 cut(s) 584
BoxI GACNNNNGTC 1 cut(s) 39
BpiI GAAGAC 1 cut(s) 875
BplI GAGNNNNNCTC 2 cut(s) 43, 75
BpmI CTGGAG 1 cut(s) 245
BpuEI CTTGAG 1 cut(s) 945
BsaAI YACGTR 1 cut(s) 602
BsaJI CCNNGG 5 cut(s) 50, 195, 260, 390, 1173
BsaWI WCCGGW 2 cut(s) 365, 1144
Bsc4I CCNNNNNNNGG 6 cut(s) 559, 574, 657, 1130, 1131, 1276
Bse1I ACTGG 6 cut(s) 7, 220, 310, 579, 778, 897
BseBI CCWGG 4 cut(s) 143, 196, 334, 474
BseDI CCNNGG 5 cut(s) 50, 195, 260, 390, 1173
BseGI GGATG 6 cut(s) 37, 191, 666, 870, 1080, 1192
BseLI CCNNNNNNNGG 6 cut(s) 559, 574, 657, 1130, 1131, 1276
BseMII CTCAG 3 cut(s) 723, 798, 1197
BseNI ACTGG 6 cut(s) 7, 220, 310, 579, 778, 897
BseRI GAGGAG 1 cut(s) 764
BseX3I CGGCCG 1 cut(s) 1117
BseXI GCAGC 6 cut(s) 549, 796, 799, 861, 1030, 1207
BseYI CCCAGC 3 cut(s) 17, 21, 632
BsgI GTGCAG 2 cut(s) 556, 643
Bsh1236I CGCG 4 cut(s) 172, 210, 398, 548
Bsh1285I CGRYCG 2 cut(s) 703, 1120
BshFI GGCC 4 cut(s) 141, 149, 1046, 1119
BsiEI CGRYCG 2 cut(s) 703, 1120
BsiHKAI GWGCWC 2 cut(s) 373, 483
BsiHKCI CYCGRG 2 cut(s) 522, 617
BsiSI CCGG 2 cut(s) 366, 1145
BslFI GGGAC 4 cut(s) 212, 389, 872, 1124
BslI CCNNNNNNNGG 6 cut(s) 559, 574, 657, 1130, 1131, 1276
BsmFI GGGAC 4 cut(s) 212, 389, 872, 1124
BsmI GAATGC 1 cut(s) 1163
BsnI GGCC 4 cut(s) 141, 149, 1046, 1119
BsoBI CYCGRG 2 cut(s) 522, 617
Bsp1286I GDGCHC 2 cut(s) 373, 483
Bsp143I GATC 6 cut(s) 25, 340, 504, 626, 852, 1243
Bsp19I CCATGG 2 cut(s) 390, 1173
BspACI CCGC 9 cut(s) 47, 170, 309, 546, 568, 590, 642, 1120, 1200
BspANI GGCC 4 cut(s) 141, 149, 1046, 1119
BspCNI CTCAG 3 cut(s) 722, 797, 1198
BspFNI CGCG 4 cut(s) 172, 210, 398, 548
BspLI GGNNCC 3 cut(s) 405, 888, 1047
BspMAI CTGCAG 1 cut(s) 879
BspMI ACCTGC 3 cut(s) 196, 616, 1267
BspPI GGATC 3 cut(s) 33, 621, 1238
BsrBI CCGCTC 1 cut(s) 642
BsrI ACTGG 6 cut(s) 7, 220, 310, 579, 778, 897
BssECI CCNNGG 5 cut(s) 50, 195, 260, 390, 1173
BssMI GATC 6 cut(s) 25, 340, 504, 626, 852, 1243
BssT1I CCWWGG 2 cut(s) 390, 1173
Bst2UI CCWGG 4 cut(s) 143, 196, 334, 474
Bst4CI ACNGT 6 cut(s) 38, 350, 440, 469, 704, 1234
Bst6I CTCTTC 1 cut(s) 66
BstAPI GCANNNNNTGC 1 cut(s) 1262
BstBAI YACGTR 1 cut(s) 602
BstC8I GCNNGC 9 cut(s) 176, 592, 671, 675, 957, 993, 1198, 1254, 1267
BstDEI CTNAG 4 cut(s) 690, 709, 784, 1206
BstDSI CCRYGG 2 cut(s) 390, 1173
BstF5I GGATG 6 cut(s) 37, 191, 666, 870, 1080, 1192
BstFNI CGCG 4 cut(s) 172, 210, 398, 548
BstH2I RGCGCY 3 cut(s) 517, 543, 1206
BstHHI GCGC 5 cut(s) 174, 212, 516, 542, 1205
BstKTI GATC 6 cut(s) 28, 343, 507, 629, 855, 1246
BstMBI GATC 6 cut(s) 25, 340, 504, 626, 852, 1243
BstMCI CGRYCG 2 cut(s) 703, 1120
BstMWI GCNNNNNNNGC 7 cut(s) 478, 492, 596, 880, 1197, 1202, 1262
BstNI CCWGG 4 cut(s) 143, 196, 334, 474
BstNSI RCATGY 2 cut(s) 991, 1269
BstPAI GACNNNNGTC 1 cut(s) 39
BstSCI CCNGG 4 cut(s) 141, 194, 332, 472
BstSFI CTRYAG 2 cut(s) 459, 875
BstUI CGCG 4 cut(s) 172, 210, 398, 548
BstV1I GCAGC 6 cut(s) 549, 796, 799, 861, 1030, 1207
BstV2I GAAGAC 1 cut(s) 875
BstX2I RGATCY 2 cut(s) 25, 626
BstXI CCANNNNNNTGG 2 cut(s) 391, 526
BstYI RGATCY 2 cut(s) 25, 626
BstZI CGGCCG 1 cut(s) 1117
BsuRI GGCC 4 cut(s) 141, 149, 1046, 1119
BtgI CCRYGG 2 cut(s) 390, 1173
BtsCI GGATG 6 cut(s) 37, 191, 666, 870, 1080, 1192
BtsIMutI CAGTG 3 cut(s) 14, 303, 346
BveI ACCTGC 3 cut(s) 196, 616, 1267
Cac8I GCNNGC 9 cut(s) 176, 592, 671, 675, 957, 993, 1198, 1254, 1267
CaiI CAGNNNCTG 1 cut(s) 883
CfoI GCGC 5 cut(s) 174, 212, 516, 542, 1205
Cfr13I GGNCC 3 cut(s) 403, 886, 1045
CseI GACGC 2 cut(s) 404, 880
CsiI ACCWGGT 1 cut(s) 332
Csp6I GTAC 4 cut(s) 219, 252, 605, 771
CviQI GTAC 4 cut(s) 219, 252, 605, 771
DdeI CTNAG 4 cut(s) 690, 709, 784, 1206
DpnI GATC 6 cut(s) 27, 342, 506, 628, 854, 1245
DpnII GATC 6 cut(s) 25, 340, 504, 626, 852, 1243
DrdI GACNNNNNNGTC 1 cut(s) 401
DseDI GACNNNNNNGTC 1 cut(s) 401
EaeI YGGCCR 3 cut(s) 139, 147, 1117
EagI CGGCCG 1 cut(s) 1117
Eam1104I CTCTTC 1 cut(s) 66
EarI CTCTTC 1 cut(s) 66
EclXI CGGCCG 1 cut(s) 1117
Eco130I CCWWGG 2 cut(s) 390, 1173
Eco47I GGWCC 2 cut(s) 403, 886
Eco47III AGCGCT 1 cut(s) 541
Eco52I CGGCCG 1 cut(s) 1117
Eco72I CACGTG 1 cut(s) 602
Eco88I CYCGRG 2 cut(s) 522, 617
EcoRII CCWGG 4 cut(s) 141, 194, 332, 472
EcoT14I CCWWGG 2 cut(s) 390, 1173
ErhI CCWWGG 2 cut(s) 390, 1173
FalI AAGNNNNNCTT 4 cut(s) 263, 295, 666, 698
FaqI GGGAC 4 cut(s) 212, 389, 872, 1124
FauI CCCGC 2 cut(s) 575, 583
FbaI TGATCA 1 cut(s) 504
FblI GTMKAC 1 cut(s) 166
Fnu4HI GCNGC 8 cut(s) 538, 810, 813, 875, 1019, 1120, 1201, 1221
FokI GGATG 6 cut(s) 44, 178, 673, 877, 1087, 1199
Fsp4HI GCNGC 8 cut(s) 538, 810, 813, 875, 1019, 1120, 1201, 1221
GlaI GCGC 5 cut(s) 173, 211, 515, 541, 1204
GluI GCNGC 8 cut(s) 538, 810, 813, 875, 1019, 1120, 1201, 1221
GsaI CCCAGC 3 cut(s) 21, 25, 636
GsuI CTGGAG 1 cut(s) 245
HaeII RGCGCY 3 cut(s) 517, 543, 1206
HaeIII GGCC 4 cut(s) 141, 149, 1046, 1119
HapII CCGG 2 cut(s) 366, 1145
HgaI GACGC 2 cut(s) 404, 880
HhaI GCGC 5 cut(s) 174, 212, 516, 542, 1205
Hin6I GCGC 5 cut(s) 172, 210, 514, 540, 1203
HinP1I GCGC 5 cut(s) 172, 210, 514, 540, 1203
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HindIII AAGCTT 1 cut(s) 912
HinfI GANTC 4 cut(s) 227, 455, 707, 1137
HpaII CCGG 2 cut(s) 366, 1145
HphI GGTGA 1 cut(s) 1145
Hpy166II GTNNAC 4 cut(s) 44, 167, 238, 605
Hpy188I TCNGA 1 cut(s) 832
Hpy188III TCNNGA 3 cut(s) 29, 89, 224
Hpy8I GTNNAC 4 cut(s) 44, 167, 238, 605
Hpy99I CGWCG 1 cut(s) 749
HpyCH4III ACNGT 6 cut(s) 38, 350, 440, 469, 704, 1234
HpyCH4IV ACGT 3 cut(s) 601, 653, 835
HpyF10VI GCNNNNNNNGC 7 cut(s) 478, 492, 596, 880, 1197, 1202, 1262
HpyF3I CTNAG 4 cut(s) 690, 709, 784, 1206
HpySE526I ACGT 3 cut(s) 601, 653, 835
HspAI GCGC 5 cut(s) 172, 210, 514, 540, 1203
Ksp22I TGATCA 1 cut(s) 504
Kzo9I GATC 6 cut(s) 25, 340, 504, 626, 852, 1243
LmnI GCTCC 2 cut(s) 376, 521
Lsp1109I GCAGC 6 cut(s) 549, 796, 799, 861, 1030, 1207
LweI GCATC 2 cut(s) 200, 1227
MabI ACCWGGT 1 cut(s) 332
MaeII ACGT 3 cut(s) 601, 653, 835
MaeIII GTNAC 4 cut(s) 328, 704, 716, 1212
MalI GATC 6 cut(s) 27, 342, 506, 628, 854, 1245
MbiI CCGCTC 1 cut(s) 642
MboI GATC 6 cut(s) 25, 340, 504, 626, 852, 1243
MboII GAAGA 3 cut(s) 53, 880, 1142
MfeI CAATTG 1 cut(s) 950
MflI RGATCY 2 cut(s) 25, 626
MhlI GDGCHC 2 cut(s) 373, 483
MlsI TGGCCA 2 cut(s) 141, 149
MluCI AATT 3 cut(s) 76, 892, 950
MluI ACGCGT 1 cut(s) 396
MluNI TGGCCA 2 cut(s) 141, 149
MlyI GAGTC 4 cut(s) 236, 449, 701, 1146
MmeI TCCRAC 1 cut(s) 402
Mox20I TGGCCA 2 cut(s) 141, 149
MscI TGGCCA 2 cut(s) 141, 149
MseI TTAA 1 cut(s) 1287
MslI CAYNNNNRTG 6 cut(s) 351, 389, 500, 524, 619, 1172
Msp20I TGGCCA 2 cut(s) 141, 149
MspA1I CMGCKG 1 cut(s) 21
MspI CCGG 2 cut(s) 366, 1145
MspR9I CCNGG 4 cut(s) 143, 196, 334, 474
MunI CAATTG 1 cut(s) 950
Mva1269I GAATGC 1 cut(s) 1163
MvaI CCWGG 4 cut(s) 143, 196, 334, 474
MvnI CGCG 4 cut(s) 172, 210, 398, 548
MwoI GCNNNNNNNGC 7 cut(s) 478, 492, 596, 880, 1197, 1202, 1262
NcoI CCATGG 2 cut(s) 390, 1173
NdeII GATC 6 cut(s) 25, 340, 504, 626, 852, 1243
NlaIV GGNNCC 3 cut(s) 405, 888, 1047
NmeAIII GCCGAG 2 cut(s) 75, 462
NmuCI GTSAC 3 cut(s) 328, 704, 716
NspI RCATGY 2 cut(s) 991, 1269
OliI CACNNNNGTG 4 cut(s) 351, 500, 524, 619
PaeI GCATGC 1 cut(s) 1269
PaeR7I CTCGAG 1 cut(s) 522
PctI GAATGC 1 cut(s) 1163
PkrI GCNGC 8 cut(s) 539, 811, 814, 876, 1020, 1121, 1202, 1222
PleI GAGTC 4 cut(s) 235, 449, 701, 1145
PmaCI CACGTG 1 cut(s) 602
PmlI CACGTG 1 cut(s) 602
PpsI GAGTC 4 cut(s) 235, 449, 701, 1145
Ppu21I YACGTR 1 cut(s) 602
PshAI GACNNNNGTC 1 cut(s) 39
Psp6I CCWGG 4 cut(s) 141, 194, 332, 472
PspCI CACGTG 1 cut(s) 602
PspFI CCCAGC 3 cut(s) 17, 21, 632
PspGI CCWGG 4 cut(s) 141, 194, 332, 472
PspN4I GGNNCC 3 cut(s) 405, 888, 1047
PspPI GGNCC 3 cut(s) 403, 886, 1045
PspXI VCTCGAGB 1 cut(s) 522
PstI CTGCAG 1 cut(s) 879
PstNI CAGNNNCTG 1 cut(s) 883
PsuI RGATCY 2 cut(s) 25, 626
PvuII CAGCTG 1 cut(s) 21
RsaI GTAC 4 cut(s) 220, 253, 606, 772
RsaNI GTAC 4 cut(s) 219, 252, 605, 771
RseI CAYNNNNRTG 6 cut(s) 351, 389, 500, 524, 619, 1172
SaqAI TTAA 1 cut(s) 1287
SatI GCNGC 8 cut(s) 538, 810, 813, 875, 1019, 1120, 1201, 1221
Sau3AI GATC 6 cut(s) 25, 340, 504, 626, 852, 1243
Sau96I GGNCC 3 cut(s) 403, 886, 1045
ScaI AGTACT 1 cut(s) 772
SchI GAGTC 4 cut(s) 236, 449, 701, 1146
ScrFI CCNGG 4 cut(s) 143, 196, 334, 474
SduI GDGCHC 2 cut(s) 373, 483
SexAI ACCWGGT 1 cut(s) 332
SfaNI GCATC 2 cut(s) 200, 1227
SfcI CTRYAG 2 cut(s) 459, 875
Sfr274I CTCGAG 1 cut(s) 522
SinI GGWCC 2 cut(s) 403, 886
SlaI CTCGAG 1 cut(s) 522
SmiMI CAYNNNNRTG 6 cut(s) 351, 389, 500, 524, 619, 1172
SmlI CTYRAG 2 cut(s) 522, 960
SmoI CTYRAG 2 cut(s) 522, 960
SphI GCATGC 1 cut(s) 1269
Sse9I AATT 3 cut(s) 76, 892, 950
SsiI CCGC 9 cut(s) 47, 170, 309, 546, 568, 590, 642, 1120, 1200
StyD4I CCNGG 4 cut(s) 141, 194, 332, 472
StyI CCWWGG 2 cut(s) 390, 1173
TaaI ACNGT 6 cut(s) 38, 350, 440, 469, 704, 1234
TaiI ACGT 3 cut(s) 604, 656, 838
TaqI TCGA 3 cut(s) 105, 339, 523
TasI AATT 3 cut(s) 76, 892, 950
TatI WGTACW 2 cut(s) 251, 770
TauI GCSGC 2 cut(s) 1122, 1203
Tru1I TTAA 1 cut(s) 1287
Tru9I TTAA 1 cut(s) 1287
TscAI CASTG 3 cut(s) 14, 310, 353
TseFI GTSAC 3 cut(s) 328, 704, 716
TseI GCWGC 6 cut(s) 537, 809, 812, 874, 1018, 1220
Tsp45I GTSAC 3 cut(s) 328, 704, 716
TspDTI ATGAA 7 cut(s) 126, 444, 881, 998, 1121, 1156, 1170
TspGWI ACGGA 1 cut(s) 1283
TspRI CASTG 3 cut(s) 14, 310, 353
VpaK11BI GGWCC 2 cut(s) 403, 886
XapI RAATTY 1 cut(s) 892
XceI RCATGY 2 cut(s) 991, 1269
XcmI CCANNNNNNNNNTGG 4 cut(s) 25, 157, 397, 658
XhoI CTCGAG 1 cut(s) 522
XmiI GTMKAC 1 cut(s) 166
ZrmI AGTACT 1 cut(s) 772
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.