Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0011387

Physical Location & Seq

Genomic Coordinates Reverse (-)

27562436 .. 27565561

Gene Structure 3126 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00306600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1359 bp

ATGAGCCAGTGTGTTCCCAGCTGGGATCTTGATGACAGTAGTCCACCGCCGAGGCTCTCTCTTCGTTCTCACTCCAATTCCACCGCTCCTGATGTTCCCATGTTCGACTATGAAGTAGCAGAGCTGACATGGGAAAATGGCCAGGTGGCCATGCACGGCTTGGGTCTACCGCGCTTGCCTTCCAAACCTGCATCCTGGGACAAGCCACGCGCTACTGGTACTCTGGAGTCCATAGTCAACCAAGCCACCTGTACTTTGCCTCGGTTTTCCAAGCCTCCTTTTGATAACACCATCACTTCTGCCACTGGCGGTGGTGCTAACAAAGTAGTGACCTGGTTTGATCATCACTGTCGTGTTGCCACCTCCGGTGCTCCCACCAACACCATGACCATGGACGCGTTGGTCCCTTGCAGGAACAACCAACCTGATGAACCAAACAGTAGCCTTATGATAGACTCTGTAGTTGCCGTGCCAGGAGTGCTCGGCAGTTCTGGCACAGGCATGATCAATGGGTGCTCCACTCGAGTGGGGTCGTGCAGCGCTACCGCGACCCACACCGAGGACACCCGCCGACTGGGAAAACACAAGGCGGGCGTTGCACGCGTACCTGCTACACCCGAGTGCAGATCCCCCAGCGTGAGCGGTAGTGCCACGTTTGGGATGGATAGCCAGCAAGCCACACTTGATACTAAGGGAAGCGACCGTGACTCAGTTTGTCACAGTAGACCACAGAGAGAGGAAAGCGACGAGGAGGAGAGAAAGAAGCGAAATACTGGAAAATCCTCAGTTTCTACAAAAAGGAGTAGGGCTGCTGCTATACATAACCAATCTGAACGTAAAAGGAGAGATAAGATCAACCAGAGGATGAAGACGCTGCAGAAGCTGGTCCCAAATTCCAGTAAGACTGATAAAGCTTCAATGCTGGACGAAGTGATTGAATACTTGAAACAATTGCAAGCTCAAGTCCATGTGATAAGCAGAATGAACATGCCAGCCATGATGTTGCCGATGGCTATGCAGCAACATTTTCAAATGTCTATGATGGCCCCAAGAAATATGGGCATGGGGATTGGGATGGGAATGGGAATGGGAATGGACATGAACAACATCGGCCGCCCCAACATAGGGGGAGTTCCTCCGGTTCTTCACCCAACTGCTTTCATGCCCATGGCATCATGGGATGGCTCTGCCTGCGGCGCTGAGAGGTTACAAGCTGCTTCAACGACTGTGATGCCTGATCCCTCGCCAGCATTTCTTGCATGCCAATCGCAGCCGATGACCATGGATGCTTACAGCATGATGGCGGCCATGTATCAACAATTCCATCAGCAACCAGCAGCATCTAGTTCTAAGAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003700 GO:0005575 GO:0005911 GO:0006355 GO:0008150 GO:0009506 GO:0009566 GO:0009567 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0019953 GO:0022414 GO:0030054 GO:0031323 GO:0031326 GO:0044703 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0051704 GO:0055044 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

HLH

Protein Analysis

452

Amino Acids

48.94

Weight (kDa)

8.89

Isoelectric Point (pI)

62.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HLH	PF00010	274 - 319	4.3e-14	Helix-loop-helix DNA-binding domain
bHLH_SAC51	PF23173	277 - 324	1.9e-08	Transcription factor SAC51 bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011387)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00050 AT4G00050 AT4G00050
fragaria_vesca	FvH4_7g10840
malus_domestica	MD07G1113200.v1.1
prunus_persica	Prupe.2G136300_v2.0.a1 Prupe.2G136300_v2.0.a1 Prupe.2G136300_v2.0.a1
pyrus_communis	pycom07g09800
rosa_chinensis	RchiOBHm_Chr1g0348781
rosa_laevigata	RLG00000028624
rosa_multiflora	Rmu_co8207186.1_g000001 Rmu_sc0002970.1_g000013
rosa_roxburghii	Rroxscaffold_4G00306600
rosa_rugosa	Rorug01G0197900
rosa_samantha	Rh1AG215200 Rh1BG181500 Rh1CG199600 Rh1DG211400
rosa_wichuraiana	Rw1G018230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	401
Acc36I	ACCTGC	2 cut(s)	196, 616
AccBSI	CCGCTC	2 cut(s)	86, 642
AccI	GTMKAC	2 cut(s)	166, 724
AccII	CGCG	5 cut(s)	172, 210, 398, 548, 603
AclWI	GGATC	3 cut(s)	33, 621, 1232
AcoI	YGGCCR	4 cut(s)	139, 147, 1111, 1305
AcsI	RAATTY	1 cut(s)	892
AfaI	GTAC	3 cut(s)	220, 253, 606
AfeI	AGCGCT	1 cut(s)	541
AfiI	CCNNNNNNNGG	5 cut(s)	559, 574, 657, 1124, 1125
AflIII	ACRYGT	2 cut(s)	396, 601
AgsI	TTSAA	5 cut(s)	918, 938, 946, 1031, 1221
AjnI	CCWGG	4 cut(s)	141, 194, 332, 472
AleI	CACNNNNGTG	3 cut(s)	351, 524, 619
AluBI	AGCT	6 cut(s)	21, 124, 883, 914, 959, 1214
AluI	AGCT	6 cut(s)	21, 124, 883, 914, 959, 1214
Alw21I	GWGCWC	3 cut(s)	373, 483, 518
AlwI	GGATC	3 cut(s)	33, 621, 1232
AlwNI	CAGNNNCTG	1 cut(s)	883
Ama87I	CYCGRG	2 cut(s)	522, 617
Aor51HI	AGCGCT	1 cut(s)	541
AoxI	GGCC	5 cut(s)	139, 147, 1044, 1111, 1305
ApeKI	GCWGC	8 cut(s)	537, 809, 812, 874, 1018, 1214, 1270, 1337
ApoI	RAATTY	1 cut(s)	892
AspLEI	GCGC	4 cut(s)	174, 212, 542, 1199
AspS9I	GGNCC	3 cut(s)	403, 886, 1045
AsuHPI	GGTGA	1 cut(s)	1139
AvaI	CYCGRG	2 cut(s)	522, 617
AvaII	GGWCC	2 cut(s)	403, 886
BalI	TGGCCA	2 cut(s)	141, 149
BbsI	GAAGAC	1 cut(s)	875
Bbv12I	GWGCWC	3 cut(s)	373, 483, 518
BbvI	GCAGC	8 cut(s)	549, 796, 799, 861, 1030, 1201, 1282, 1349
BccI	CCATC	8 cut(s)	299, 655, 1003, 1036, 1069, 1175, 1294, 1332
BceAI	ACGGC	2 cut(s)	172, 452
BcgI	CGANNNNNNTGC	6 cut(s)	997, 1031, 1213, 1247, 1248, 1282
BciT130I	CCWGG	4 cut(s)	143, 196, 334, 474
BclI	TGATCA	2 cut(s)	340, 504
BfaI	CTAG	1 cut(s)	1344
BfmI	CTRYAG	2 cut(s)	459, 875
BfoI	RGCGCY	2 cut(s)	543, 1200
BfuAI	ACCTGC	2 cut(s)	196, 616
Bme1390I	CCNGG	4 cut(s)	143, 196, 334, 474
Bme18I	GGWCC	2 cut(s)	403, 886
BmeT110I	CYCGRG	2 cut(s)	522, 617
BmgT120I	GGNCC	3 cut(s)	403, 886, 1045
BmiI	GGNNCC	3 cut(s)	405, 888, 1047
BmrFI	CCNGG	4 cut(s)	143, 196, 334, 474
BmrI	ACTGGG	1 cut(s)	584
BmsI	GCATC	5 cut(s)	200, 1181, 1221, 1276, 1349
BmuI	ACTGGG	1 cut(s)	584
BoxI	GACNNNNGTC	1 cut(s)	39
BpiI	GAAGAC	1 cut(s)	875
BplI	GAGNNNNNCTC	2 cut(s)	43, 75
BpmI	CTGGAG	1 cut(s)	245
BpuEI	CTTGAG	1 cut(s)	945
BsaJI	CCNNGG	7 cut(s)	50, 195, 260, 390, 558, 1167, 1281
BsaWI	WCCGGW	2 cut(s)	365, 1138
Bsc4I	CCNNNNNNNGG	5 cut(s)	559, 574, 657, 1124, 1125
Bse1I	ACTGG	6 cut(s)	7, 220, 310, 579, 778, 897
BseBI	CCWGG	4 cut(s)	143, 196, 334, 474
BseDI	CCNNGG	7 cut(s)	50, 195, 260, 390, 558, 1167, 1281
BseGI	GGATG	6 cut(s)	191, 666, 870, 1080, 1186, 1291
BseLI	CCNNNNNNNGG	5 cut(s)	559, 574, 657, 1124, 1125
BseMII	CTCAG	3 cut(s)	723, 798, 1191
BseNI	ACTGG	6 cut(s)	7, 220, 310, 579, 778, 897
BseRI	GAGGAG	2 cut(s)	764, 767
BseX3I	CGGCCG	1 cut(s)	1111
BseXI	GCAGC	8 cut(s)	549, 796, 799, 861, 1030, 1201, 1282, 1349
BseYI	CCCAGC	3 cut(s)	17, 21, 632
BsgI	GTGCAG	2 cut(s)	556, 643
Bsh1236I	CGCG	5 cut(s)	172, 210, 398, 548, 603
Bsh1285I	CGRYCG	2 cut(s)	703, 1114
BshFI	GGCC	5 cut(s)	141, 149, 1046, 1113, 1307
BsiEI	CGRYCG	2 cut(s)	703, 1114
BsiHKAI	GWGCWC	3 cut(s)	373, 483, 518
BsiHKCI	CYCGRG	2 cut(s)	522, 617
BsiSI	CCGG	2 cut(s)	366, 1139
BslFI	GGGAC	3 cut(s)	212, 389, 872
BslI	CCNNNNNNNGG	5 cut(s)	559, 574, 657, 1124, 1125
BsmFI	GGGAC	3 cut(s)	212, 389, 872
BsnI	GGCC	5 cut(s)	141, 149, 1046, 1113, 1307
BsoBI	CYCGRG	2 cut(s)	522, 617
Bsp1286I	GDGCHC	3 cut(s)	373, 483, 518
Bsp143I	GATC	6 cut(s)	25, 340, 504, 626, 852, 1237
Bsp19I	CCATGG	3 cut(s)	390, 1167, 1281
BspANI	GGCC	5 cut(s)	141, 149, 1046, 1113, 1307
BspCNI	CTCAG	3 cut(s)	722, 797, 1192
BspFNI	CGCG	5 cut(s)	172, 210, 398, 548, 603
BspLI	GGNNCC	3 cut(s)	405, 888, 1047
BspMAI	CTGCAG	1 cut(s)	879
BspMI	ACCTGC	2 cut(s)	196, 616
BspPI	GGATC	3 cut(s)	33, 621, 1232
BsrBI	CCGCTC	2 cut(s)	86, 642
BsrI	ACTGG	6 cut(s)	7, 220, 310, 579, 778, 897
BssECI	CCNNGG	7 cut(s)	50, 195, 260, 390, 558, 1167, 1281
BssMI	GATC	6 cut(s)	25, 340, 504, 626, 852, 1237
BssT1I	CCWWGG	3 cut(s)	390, 1167, 1281
Bst2UI	CCWGG	4 cut(s)	143, 196, 334, 474
Bst4CI	ACNGT	6 cut(s)	38, 350, 440, 704, 722, 1228
Bst6I	CTCTTC	1 cut(s)	66
BstAPI	GCANNNNNTGC	1 cut(s)	1256
BstDEI	CTNAG	5 cut(s)	690, 709, 784, 1200, 1350
BstDSI	CCRYGG	3 cut(s)	390, 1167, 1281
BstF5I	GGATG	6 cut(s)	191, 666, 870, 1080, 1186, 1291
BstFNI	CGCG	5 cut(s)	172, 210, 398, 548, 603
BstH2I	RGCGCY	2 cut(s)	543, 1200
BstHHI	GCGC	4 cut(s)	174, 212, 542, 1199
BstKTI	GATC	6 cut(s)	28, 343, 507, 629, 855, 1240
BstMBI	GATC	6 cut(s)	25, 340, 504, 626, 852, 1237
BstMCI	CGRYCG	2 cut(s)	703, 1114
BstMWI	GCNNNNNNNGC	8 cut(s)	478, 492, 596, 600, 880, 1191, 1196, 1256
BstNI	CCWGG	4 cut(s)	143, 196, 334, 474
BstNSI	RCATGY	2 cut(s)	991, 1263
BstPAI	GACNNNNGTC	1 cut(s)	39
BstSCI	CCNGG	4 cut(s)	141, 194, 332, 472
BstSFI	CTRYAG	2 cut(s)	459, 875
BstUI	CGCG	5 cut(s)	172, 210, 398, 548, 603
BstV1I	GCAGC	8 cut(s)	549, 796, 799, 861, 1030, 1201, 1282, 1349
BstV2I	GAAGAC	1 cut(s)	875
BstX2I	RGATCY	2 cut(s)	25, 626
BstXI	CCANNNNNNTGG	2 cut(s)	391, 526
BstYI	RGATCY	2 cut(s)	25, 626
BstZI	CGGCCG	1 cut(s)	1111
BsuRI	GGCC	5 cut(s)	141, 149, 1046, 1113, 1307
BtgI	CCRYGG	3 cut(s)	390, 1167, 1281
BtsCI	GGATG	6 cut(s)	191, 666, 870, 1080, 1186, 1291
BtsIMutI	CAGTG	3 cut(s)	14, 303, 346
BveI	ACCTGC	2 cut(s)	196, 616
CaiI	CAGNNNCTG	1 cut(s)	883
CfoI	GCGC	4 cut(s)	174, 212, 542, 1199
Cfr13I	GGNCC	3 cut(s)	403, 886, 1045
CseI	GACGC	2 cut(s)	404, 880
CsiI	ACCWGGT	1 cut(s)	332
Csp6I	GTAC	3 cut(s)	219, 252, 605
CviQI	GTAC	3 cut(s)	219, 252, 605
DdeI	CTNAG	5 cut(s)	690, 709, 784, 1200, 1350
DpnI	GATC	6 cut(s)	27, 342, 506, 628, 854, 1239
DpnII	GATC	6 cut(s)	25, 340, 504, 626, 852, 1237
DrdI	GACNNNNNNGTC	1 cut(s)	401
DseDI	GACNNNNNNGTC	1 cut(s)	401
EaeI	YGGCCR	4 cut(s)	139, 147, 1111, 1305
EagI	CGGCCG	1 cut(s)	1111
Eam1104I	CTCTTC	1 cut(s)	66
EarI	CTCTTC	1 cut(s)	66
EclXI	CGGCCG	1 cut(s)	1111
Eco130I	CCWWGG	3 cut(s)	390, 1167, 1281
Eco47I	GGWCC	2 cut(s)	403, 886
Eco47III	AGCGCT	1 cut(s)	541
Eco52I	CGGCCG	1 cut(s)	1111
Eco88I	CYCGRG	2 cut(s)	522, 617
EcoRII	CCWGG	4 cut(s)	141, 194, 332, 472
EcoT14I	CCWWGG	3 cut(s)	390, 1167, 1281
ErhI	CCWWGG	3 cut(s)	390, 1167, 1281
FalI	AAGNNNNNCTT	2 cut(s)	666, 698
FaqI	GGGAC	3 cut(s)	212, 389, 872
FauI	CCCGC	2 cut(s)	575, 583
FbaI	TGATCA	2 cut(s)	340, 504
FblI	GTMKAC	2 cut(s)	166, 724
FokI	GGATG	6 cut(s)	178, 673, 877, 1087, 1193, 1298
FspBI	CTAG	1 cut(s)	1344
GlaI	GCGC	4 cut(s)	173, 211, 541, 1198
GsaI	CCCAGC	3 cut(s)	21, 25, 636
GsuI	CTGGAG	1 cut(s)	245
HaeII	RGCGCY	2 cut(s)	543, 1200
HaeIII	GGCC	5 cut(s)	141, 149, 1046, 1113, 1307
HapII	CCGG	2 cut(s)	366, 1139
HgaI	GACGC	2 cut(s)	404, 880
HhaI	GCGC	4 cut(s)	174, 212, 542, 1199
Hin6I	GCGC	4 cut(s)	172, 210, 540, 1197
HinP1I	GCGC	4 cut(s)	172, 210, 540, 1197
HincII	GTYRAC	1 cut(s)	238
HindII	GTYRAC	1 cut(s)	238
HindIII	AAGCTT	1 cut(s)	912
HinfI	GANTC	3 cut(s)	227, 455, 707
HpaII	CCGG	2 cut(s)	366, 1139
HphI	GGTGA	1 cut(s)	1139
Hpy166II	GTNNAC	4 cut(s)	44, 167, 238, 725
Hpy188I	TCNGA	1 cut(s)	832
Hpy188III	TCNNGA	3 cut(s)	29, 89, 224
Hpy8I	GTNNAC	4 cut(s)	44, 167, 238, 725
Hpy99I	CGWCG	1 cut(s)	749
HpyAV	CCTTC	1 cut(s)	189
HpyCH4III	ACNGT	6 cut(s)	38, 350, 440, 704, 722, 1228
HpyCH4IV	ACGT	2 cut(s)	653, 835
HpyF10VI	GCNNNNNNNGC	8 cut(s)	478, 492, 596, 600, 880, 1191, 1196, 1256
HpyF3I	CTNAG	5 cut(s)	690, 709, 784, 1200, 1350
HpySE526I	ACGT	2 cut(s)	653, 835
HspAI	GCGC	4 cut(s)	172, 210, 540, 1197
Ksp22I	TGATCA	2 cut(s)	340, 504
Kzo9I	GATC	6 cut(s)	25, 340, 504, 626, 852, 1237
LmnI	GCTCC	3 cut(s)	91, 376, 521
Lsp1109I	GCAGC	8 cut(s)	549, 796, 799, 861, 1030, 1201, 1282, 1349
LweI	GCATC	5 cut(s)	200, 1181, 1221, 1276, 1349
MabI	ACCWGGT	1 cut(s)	332
MaeI	CTAG	1 cut(s)	1344
MaeII	ACGT	2 cut(s)	653, 835
MaeIII	GTNAC	4 cut(s)	328, 704, 716, 1206
MalI	GATC	6 cut(s)	27, 342, 506, 628, 854, 1239
MbiI	CCGCTC	2 cut(s)	86, 642
MboI	GATC	6 cut(s)	25, 340, 504, 626, 852, 1237
MboII	GAAGA	3 cut(s)	53, 880, 1136
MfeI	CAATTG	1 cut(s)	950
MflI	RGATCY	2 cut(s)	25, 626
MhlI	GDGCHC	3 cut(s)	373, 483, 518
MlsI	TGGCCA	2 cut(s)	141, 149
MluCI	AATT	4 cut(s)	76, 892, 950, 1319
MluI	ACGCGT	2 cut(s)	396, 601
MluNI	TGGCCA	2 cut(s)	141, 149
MlyI	GAGTC	3 cut(s)	236, 449, 701
Mox20I	TGGCCA	2 cut(s)	141, 149
MscI	TGGCCA	2 cut(s)	141, 149
MslI	CAYNNNNRTG	6 cut(s)	351, 389, 500, 524, 619, 1166
Msp20I	TGGCCA	2 cut(s)	141, 149
MspA1I	CMGCKG	1 cut(s)	21
MspI	CCGG	2 cut(s)	366, 1139
MspR9I	CCNGG	4 cut(s)	143, 196, 334, 474
MunI	CAATTG	1 cut(s)	950
MvaI	CCWGG	4 cut(s)	143, 196, 334, 474
MvnI	CGCG	5 cut(s)	172, 210, 398, 548, 603
MwoI	GCNNNNNNNGC	8 cut(s)	478, 492, 596, 600, 880, 1191, 1196, 1256
NcoI	CCATGG	3 cut(s)	390, 1167, 1281
NdeII	GATC	6 cut(s)	25, 340, 504, 626, 852, 1237
NlaIV	GGNNCC	3 cut(s)	405, 888, 1047
NmeAIII	GCCGAG	2 cut(s)	75, 462
NmuCI	GTSAC	3 cut(s)	328, 704, 716
NspI	RCATGY	2 cut(s)	991, 1263
OliI	CACNNNNGTG	3 cut(s)	351, 524, 619
PaeI	GCATGC	1 cut(s)	1263
PaeR7I	CTCGAG	1 cut(s)	522
PleI	GAGTC	3 cut(s)	235, 449, 701
PpsI	GAGTC	3 cut(s)	235, 449, 701
PshAI	GACNNNNGTC	1 cut(s)	39
Psp6I	CCWGG	4 cut(s)	141, 194, 332, 472
PspFI	CCCAGC	3 cut(s)	17, 21, 632
PspGI	CCWGG	4 cut(s)	141, 194, 332, 472
PspN4I	GGNNCC	3 cut(s)	405, 888, 1047
PspPI	GGNCC	3 cut(s)	403, 886, 1045
PspXI	VCTCGAGB	1 cut(s)	522
PstI	CTGCAG	1 cut(s)	879
PstNI	CAGNNNCTG	1 cut(s)	883
PsuI	RGATCY	2 cut(s)	25, 626
PvuII	CAGCTG	1 cut(s)	21
RsaI	GTAC	3 cut(s)	220, 253, 606
RsaNI	GTAC	3 cut(s)	219, 252, 605
RseI	CAYNNNNRTG	6 cut(s)	351, 389, 500, 524, 619, 1166
Sau3AI	GATC	6 cut(s)	25, 340, 504, 626, 852, 1237
Sau96I	GGNCC	3 cut(s)	403, 886, 1045
SchI	GAGTC	3 cut(s)	236, 449, 701
ScrFI	CCNGG	4 cut(s)	143, 196, 334, 474
SduI	GDGCHC	3 cut(s)	373, 483, 518
SexAI	ACCWGGT	1 cut(s)	332
SfaNI	GCATC	5 cut(s)	200, 1181, 1221, 1276, 1349
SfcI	CTRYAG	2 cut(s)	459, 875
Sfr274I	CTCGAG	1 cut(s)	522
SinI	GGWCC	2 cut(s)	403, 886
SlaI	CTCGAG	1 cut(s)	522
SmiMI	CAYNNNNRTG	6 cut(s)	351, 389, 500, 524, 619, 1166
SmlI	CTYRAG	2 cut(s)	522, 960
SmoI	CTYRAG	2 cut(s)	522, 960
SphI	GCATGC	1 cut(s)	1263
Sse9I	AATT	4 cut(s)	76, 892, 950, 1319
SspMI	CTAG	1 cut(s)	1344
StyD4I	CCNGG	4 cut(s)	141, 194, 332, 472
StyI	CCWWGG	3 cut(s)	390, 1167, 1281
TaaI	ACNGT	6 cut(s)	38, 350, 440, 704, 722, 1228
TaiI	ACGT	2 cut(s)	656, 838
TaqI	TCGA	2 cut(s)	105, 523
TasI	AATT	4 cut(s)	76, 892, 950, 1319
TatI	WGTACW	1 cut(s)	251
TauI	GCSGC	3 cut(s)	1116, 1197, 1307
TscAI	CASTG	3 cut(s)	14, 310, 353
TseFI	GTSAC	3 cut(s)	328, 704, 716
TseI	GCWGC	8 cut(s)	537, 809, 812, 874, 1018, 1214, 1270, 1337
Tsp45I	GTSAC	3 cut(s)	328, 704, 716
TspDTI	ATGAA	6 cut(s)	126, 444, 881, 998, 1115, 1150
TspRI	CASTG	3 cut(s)	14, 310, 353
VpaK11BI	GGWCC	2 cut(s)	403, 886
XapI	RAATTY	1 cut(s)	892
XceI	RCATGY	2 cut(s)	991, 1263
XcmI	CCANNNNNNNNNTGG	3 cut(s)	157, 397, 658
XhoI	CTCGAG	1 cut(s)	522
XmiI	GTMKAC	2 cut(s)	166, 724
XspI	CTAG	1 cut(s)	1344

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.