Transcription factor
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G00050 AT4G00050 AT4G00050 |
| fragaria_vesca | FvH4_7g10840 |
| malus_domestica | MD07G1113200.v1.1 |
| prunus_persica | Prupe.2G136300_v2.0.a1 Prupe.2G136300_v2.0.a1 Prupe.2G136300_v2.0.a1 |
| pyrus_communis | pycom07g09800 |
| rosa_chinensis | RchiOBHm_Chr1g0348781 |
| rosa_laevigata | RLG00000028624 |
| rosa_multiflora | Rmu_co8207186.1_g000001 Rmu_sc0002970.1_g000013 |
| rosa_roxburghii | Rroxscaffold_4G00306600 |
| rosa_rugosa | Rorug01G0197900 |
| rosa_samantha | Rh1AG215200 Rh1BG181500 Rh1CG199600 Rh1DG211400 |
| rosa_wichuraiana | Rw1G018230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 61 |
| Acc36I | ACCTGC | 1 cut(s) | 61 |
| AccB1I | GGYRCC | 4 cut(s) | 251, 545, 554, 1199 |
| AccI | GTMKAC | 1 cut(s) | 742 |
| AccII | CGCG | 1 cut(s) | 184 |
| AclWI | GGATC | 2 cut(s) | 33, 683 |
| AcoI | YGGCCR | 3 cut(s) | 1029, 1059, 1132 |
| AcsI | RAATTY | 1 cut(s) | 910 |
| AcvI | CACGTG | 1 cut(s) | 611 |
| AfaI | GTAC | 2 cut(s) | 221, 790 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 115, 486, 672 |
| AflIII | ACRYGT | 2 cut(s) | 610, 688 |
| AgsI | TTSAA | 6 cut(s) | 260, 936, 956, 964, 1046, 1230 |
| AjnI | CCWGG | 3 cut(s) | 227, 362, 484 |
| AleI | CACNNNNGTG | 2 cut(s) | 404, 628 |
| AluBI | AGCT | 7 cut(s) | 21, 290, 603, 901, 932, 1223, 1353 |
| AluI | AGCT | 7 cut(s) | 21, 290, 603, 901, 932, 1223, 1353 |
| AlwI | GGATC | 2 cut(s) | 33, 683 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 901 |
| Ama87I | CYCGRG | 2 cut(s) | 240, 525 |
| AoxI | GGCC | 3 cut(s) | 1029, 1059, 1132 |
| ApeKI | GCWGC | 6 cut(s) | 339, 636, 827, 892, 1223, 1313 |
| ApoI | RAATTY | 1 cut(s) | 910 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 799 |
| AspA2I | CCTAGG | 1 cut(s) | 59 |
| AspLEI | GCGC | 2 cut(s) | 186, 347 |
| AspS9I | GGNCC | 2 cut(s) | 176, 904 |
| AsuC2I | CCSGG | 3 cut(s) | 241, 242, 1140 |
| AsuHPI | GGTGA | 3 cut(s) | 502, 1151, 1220 |
| AvaI | CYCGRG | 2 cut(s) | 240, 525 |
| AvaII | GGWCC | 2 cut(s) | 176, 904 |
| AvrII | CCTAGG | 1 cut(s) | 59 |
| BalI | TGGCCA | 1 cut(s) | 1031 |
| BanI | GGYRCC | 4 cut(s) | 251, 545, 554, 1199 |
| BbrPI | CACGTG | 1 cut(s) | 611 |
| BbsI | GAAGAC | 1 cut(s) | 893 |
| BbvI | GCAGC | 6 cut(s) | 351, 648, 814, 879, 1210, 1325 |
| BccI | CCATC | 7 cut(s) | 1051, 1078, 1096, 1171, 1190, 1303, 1341 |
| BceAI | ACGGC | 2 cut(s) | 166, 184 |
| BciT130I | CCWGG | 3 cut(s) | 229, 364, 486 |
| BclI | TGATCA | 1 cut(s) | 1246 |
| BcnI | CCSGG | 3 cut(s) | 241, 242, 1140 |
| BfaI | CTAG | 4 cut(s) | 18, 60, 941, 1350 |
| BfmI | CTRYAG | 3 cut(s) | 99, 384, 893 |
| BfoI | RGCGCY | 1 cut(s) | 348 |
| BfuAI | ACCTGC | 1 cut(s) | 61 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1140 |
| BlnI | CCTAGG | 1 cut(s) | 59 |
| BmcAI | AGTACT | 1 cut(s) | 790 |
| Bme1390I | CCNGG | 6 cut(s) | 229, 241, 242, 364, 486, 1140 |
| Bme18I | GGWCC | 2 cut(s) | 176, 904 |
| BmeT110I | CYCGRG | 2 cut(s) | 240, 525 |
| BmgT120I | GGNCC | 2 cut(s) | 176, 904 |
| BmiI | GGNNCC | 7 cut(s) | 253, 426, 437, 547, 556, 906, 1201 |
| BmrFI | CCNGG | 6 cut(s) | 229, 241, 242, 364, 486, 1140 |
| BmsI | GCATC | 3 cut(s) | 506, 1285, 1355 |
| BpiI | GAAGAC | 1 cut(s) | 893 |
| BpmI | CTGGAG | 1 cut(s) | 1326 |
| Bpu10I | CCTNAGC | 2 cut(s) | 172, 348 |
| BpuEI | CTTGAG | 1 cut(s) | 290 |
| BpuMI | CCSGG | 3 cut(s) | 241, 242, 1140 |
| Bsa29I | ATCGAT | 1 cut(s) | 678 |
| BsaAI | YACGTR | 1 cut(s) | 611 |
| BsaJI | CCNNGG | 8 cut(s) | 59, 228, 239, 240, 485, 1138, 1179, 1290 |
| BsaWI | WCCGGW | 1 cut(s) | 1150 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 710, 740 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 115, 486, 672 |
| Bse118I | RCCGGY | 1 cut(s) | 1202 |
| Bse1I | ACTGG | 4 cut(s) | 556, 796, 844, 915 |
| BseBI | CCWGG | 3 cut(s) | 229, 364, 486 |
| BseCI | ATCGAT | 1 cut(s) | 678 |
| BseDI | CCNNGG | 8 cut(s) | 59, 228, 239, 240, 485, 1138, 1179, 1290 |
| BseGI | GGATG | 8 cut(s) | 281, 521, 888, 1089, 1107, 1163, 1201, 1300 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 115, 486, 672 |
| BseMII | CTCAG | 1 cut(s) | 618 |
| BseNI | ACTGG | 4 cut(s) | 556, 796, 844, 915 |
| BseXI | GCAGC | 6 cut(s) | 351, 648, 814, 879, 1210, 1325 |
| BseYI | CCCAGC | 1 cut(s) | 21 |
| BsgI | GTGCAG | 1 cut(s) | 559 |
| Bsh1236I | CGCG | 1 cut(s) | 184 |
| BshFI | GGCC | 3 cut(s) | 1031, 1061, 1134 |
| BshNI | GGYRCC | 4 cut(s) | 251, 545, 554, 1199 |
| BshVI | ATCGAT | 1 cut(s) | 678 |
| BsiHKCI | CYCGRG | 2 cut(s) | 240, 525 |
| BsiSI | CCGG | 4 cut(s) | 241, 1140, 1151, 1203 |
| BslFI | GGGAC | 3 cut(s) | 245, 599, 890 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 115, 486, 672 |
| BsmFI | GGGAC | 3 cut(s) | 245, 599, 890 |
| BsmI | GAATGC | 2 cut(s) | 1143, 1169 |
| BsnI | GGCC | 3 cut(s) | 1031, 1061, 1134 |
| BsoBI | CYCGRG | 2 cut(s) | 240, 525 |
| Bsp143I | GATC | 7 cut(s) | 25, 370, 465, 641, 675, 870, 1246 |
| Bsp19I | CCATGG | 2 cut(s) | 1179, 1290 |
| BspANI | GGCC | 3 cut(s) | 1031, 1061, 1134 |
| BspCNI | CTCAG | 1 cut(s) | 619 |
| BspDI | ATCGAT | 1 cut(s) | 678 |
| BspFNI | CGCG | 1 cut(s) | 184 |
| BspLI | GGNNCC | 7 cut(s) | 253, 426, 437, 547, 556, 906, 1201 |
| BspMAI | CTGCAG | 1 cut(s) | 897 |
| BspMI | ACCTGC | 1 cut(s) | 61 |
| BspPI | GGATC | 2 cut(s) | 33, 683 |
| BspT107I | GGYRCC | 4 cut(s) | 251, 545, 554, 1199 |
| BsrFI | RCCGGY | 1 cut(s) | 1202 |
| BsrI | ACTGG | 4 cut(s) | 556, 796, 844, 915 |
| BssAI | RCCGGY | 1 cut(s) | 1202 |
| BssECI | CCNNGG | 8 cut(s) | 59, 228, 239, 240, 485, 1138, 1179, 1290 |
| BssMI | GATC | 7 cut(s) | 25, 370, 465, 641, 675, 870, 1246 |
| BssT1I | CCWWGG | 3 cut(s) | 59, 1179, 1290 |
| Bst2UI | CCWGG | 3 cut(s) | 229, 364, 486 |
| Bst4CI | ACNGT | 3 cut(s) | 380, 406, 740 |
| Bst6I | CTCTTC | 1 cut(s) | 73 |
| BstBAI | YACGTR | 1 cut(s) | 611 |
| BstC8I | GCNNGC | 6 cut(s) | 8, 505, 715, 975, 1011, 1270 |
| BstDEI | CTNAG | 5 cut(s) | 172, 216, 348, 627, 1356 |
| BstDSI | CCRYGG | 2 cut(s) | 1179, 1290 |
| BstF5I | GGATG | 8 cut(s) | 281, 521, 888, 1089, 1107, 1163, 1201, 1300 |
| BstFNI | CGCG | 1 cut(s) | 184 |
| BstH2I | RGCGCY | 1 cut(s) | 348 |
| BstHHI | GCGC | 2 cut(s) | 186, 347 |
| BstKTI | GATC | 7 cut(s) | 28, 373, 468, 644, 678, 873, 1249 |
| BstMBI | GATC | 7 cut(s) | 25, 370, 465, 641, 675, 870, 1246 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 342, 898, 1140, 1265, 1359 |
| BstNI | CCWGG | 3 cut(s) | 229, 364, 486 |
| BstNSI | RCATGY | 3 cut(s) | 692, 1009, 1272 |
| BstSCI | CCNGG | 6 cut(s) | 227, 239, 240, 362, 484, 1138 |
| BstSFI | CTRYAG | 3 cut(s) | 99, 384, 893 |
| BstUI | CGCG | 1 cut(s) | 184 |
| BstV1I | GCAGC | 6 cut(s) | 351, 648, 814, 879, 1210, 1325 |
| BstV2I | GAAGAC | 1 cut(s) | 893 |
| BstX2I | RGATCY | 1 cut(s) | 25 |
| BstYI | RGATCY | 1 cut(s) | 25 |
| Bsu15I | ATCGAT | 1 cut(s) | 678 |
| BsuRI | GGCC | 3 cut(s) | 1031, 1061, 1134 |
| BsuTUI | ATCGAT | 1 cut(s) | 678 |
| BtgI | CCRYGG | 2 cut(s) | 1179, 1290 |
| BtsCI | GGATG | 8 cut(s) | 281, 521, 888, 1089, 1107, 1163, 1201, 1300 |
| BtsI | GCAGTG | 1 cut(s) | 547 |
| BtsIMutI | CAGTG | 3 cut(s) | 402, 547, 549 |
| BveI | ACCTGC | 1 cut(s) | 61 |
| Cac8I | GCNNGC | 6 cut(s) | 8, 505, 715, 975, 1011, 1270 |
| CaiI | CAGNNNCTG | 1 cut(s) | 901 |
| CfoI | GCGC | 2 cut(s) | 186, 347 |
| Cfr10I | RCCGGY | 1 cut(s) | 1202 |
| Cfr13I | GGNCC | 2 cut(s) | 176, 904 |
| Cfr9I | CCCGGG | 1 cut(s) | 240 |
| ClaI | ATCGAT | 1 cut(s) | 678 |
| CseI | GACGC | 2 cut(s) | 425, 898 |
| CsiI | ACCWGGT | 1 cut(s) | 362 |
| Csp6I | GTAC | 2 cut(s) | 220, 789 |
| CviQI | GTAC | 2 cut(s) | 220, 789 |
| DdeI | CTNAG | 5 cut(s) | 172, 216, 348, 627, 1356 |
| DpnI | GATC | 7 cut(s) | 27, 372, 467, 643, 677, 872, 1248 |
| DpnII | GATC | 7 cut(s) | 25, 370, 465, 641, 675, 870, 1246 |
| EaeI | YGGCCR | 3 cut(s) | 1029, 1059, 1132 |
| Eam1104I | CTCTTC | 1 cut(s) | 73 |
| EarI | CTCTTC | 1 cut(s) | 73 |
| Eco130I | CCWWGG | 3 cut(s) | 59, 1179, 1290 |
| Eco32I | GATATC | 1 cut(s) | 106 |
| Eco47I | GGWCC | 2 cut(s) | 176, 904 |
| Eco72I | CACGTG | 1 cut(s) | 611 |
| Eco88I | CYCGRG | 2 cut(s) | 240, 525 |
| EcoRII | CCWGG | 3 cut(s) | 227, 362, 484 |
| EcoRV | GATATC | 1 cut(s) | 106 |
| EcoT14I | CCWWGG | 3 cut(s) | 59, 1179, 1290 |
| ErhI | CCWWGG | 3 cut(s) | 59, 1179, 1290 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 299, 331 |
| FaqI | GGGAC | 3 cut(s) | 245, 599, 890 |
| FauI | CCCGC | 1 cut(s) | 496 |
| FbaI | TGATCA | 1 cut(s) | 1246 |
| FblI | GTMKAC | 1 cut(s) | 742 |
| FokI | GGATG | 8 cut(s) | 268, 528, 895, 1096, 1114, 1150, 1208, 1307 |
| FspBI | CTAG | 4 cut(s) | 18, 60, 941, 1350 |
| GlaI | GCGC | 2 cut(s) | 185, 346 |
| GsaI | CCCAGC | 1 cut(s) | 25 |
| GsuI | CTGGAG | 1 cut(s) | 1326 |
| HaeII | RGCGCY | 1 cut(s) | 348 |
| HaeIII | GGCC | 3 cut(s) | 1031, 1061, 1134 |
| HapII | CCGG | 4 cut(s) | 241, 1140, 1151, 1203 |
| HgaI | GACGC | 2 cut(s) | 425, 898 |
| HhaI | GCGC | 2 cut(s) | 186, 347 |
| Hin6I | GCGC | 2 cut(s) | 184, 345 |
| HinP1I | GCGC | 2 cut(s) | 184, 345 |
| HincII | GTYRAC | 2 cut(s) | 138, 271 |
| HindII | GTYRAC | 2 cut(s) | 138, 271 |
| HindIII | AAGCTT | 1 cut(s) | 930 |
| HinfI | GANTC | 5 cut(s) | 260, 320, 470, 533, 725 |
| HpaII | CCGG | 4 cut(s) | 241, 1140, 1151, 1203 |
| HphI | GGTGA | 3 cut(s) | 502, 1151, 1220 |
| Hpy166II | GTNNAC | 4 cut(s) | 138, 222, 271, 743 |
| Hpy188I | TCNGA | 1 cut(s) | 850 |
| Hpy188III | TCNNGA | 2 cut(s) | 29, 588 |
| Hpy8I | GTNNAC | 4 cut(s) | 138, 222, 271, 743 |
| Hpy99I | CGWCG | 1 cut(s) | 572 |
| HpyAV | CCTTC | 2 cut(s) | 95, 590 |
| HpyCH4III | ACNGT | 3 cut(s) | 380, 406, 740 |
| HpyCH4IV | ACGT | 2 cut(s) | 610, 668 |
| HpyCH4V | TGCA | 6 cut(s) | 166, 432, 540, 895, 973, 1036 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 342, 898, 1140, 1265, 1359 |
| HpyF3I | CTNAG | 5 cut(s) | 172, 216, 348, 627, 1356 |
| HpySE526I | ACGT | 2 cut(s) | 610, 668 |
| HspAI | GCGC | 2 cut(s) | 184, 345 |
| Ksp22I | TGATCA | 1 cut(s) | 1246 |
| Kzo9I | GATC | 7 cut(s) | 25, 370, 465, 641, 675, 870, 1246 |
| LmnI | GCTCC | 4 cut(s) | 61, 80, 524, 633 |
| Lsp1109I | GCAGC | 6 cut(s) | 351, 648, 814, 879, 1210, 1325 |
| LweI | GCATC | 3 cut(s) | 506, 1285, 1355 |
| MabI | ACCWGGT | 1 cut(s) | 362 |
| MaeI | CTAG | 4 cut(s) | 18, 60, 941, 1350 |
| MaeII | ACGT | 2 cut(s) | 610, 668 |
| MaeIII | GTNAC | 5 cut(s) | 406, 691, 734, 1020, 1208 |
| MalI | GATC | 7 cut(s) | 27, 372, 467, 643, 677, 872, 1248 |
| MboI | GATC | 7 cut(s) | 25, 370, 465, 641, 675, 870, 1246 |
| MboII | GAAGA | 6 cut(s) | 60, 315, 779, 792, 898, 1148 |
| MfeI | CAATTG | 1 cut(s) | 968 |
| MflI | RGATCY | 1 cut(s) | 25 |
| MlsI | TGGCCA | 1 cut(s) | 1031 |
| MluCI | AATT | 2 cut(s) | 910, 968 |
| MluNI | TGGCCA | 1 cut(s) | 1031 |
| MlyI | GAGTC | 2 cut(s) | 479, 719 |
| MmeI | TCCRAC | 1 cut(s) | 96 |
| Mox20I | TGGCCA | 1 cut(s) | 1031 |
| MroXI | GAANNNNTTC | 1 cut(s) | 799 |
| MscI | TGGCCA | 1 cut(s) | 1031 |
| MslI | CAYNNNNRTG | 6 cut(s) | 404, 479, 570, 628, 1082, 1178 |
| Msp20I | TGGCCA | 1 cut(s) | 1031 |
| MspA1I | CMGCKG | 2 cut(s) | 342, 1223 |
| MspI | CCGG | 4 cut(s) | 241, 1140, 1151, 1203 |
| MspR9I | CCNGG | 6 cut(s) | 229, 241, 242, 364, 486, 1140 |
| MunI | CAATTG | 1 cut(s) | 968 |
| Mva1269I | GAATGC | 2 cut(s) | 1143, 1169 |
| MvaI | CCWGG | 3 cut(s) | 229, 364, 486 |
| MvnI | CGCG | 1 cut(s) | 184 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 342, 898, 1140, 1265, 1359 |
| NciI | CCSGG | 3 cut(s) | 241, 242, 1140 |
| NcoI | CCATGG | 2 cut(s) | 1179, 1290 |
| NdeII | GATC | 7 cut(s) | 25, 370, 465, 641, 675, 870, 1246 |
| NlaIV | GGNNCC | 7 cut(s) | 253, 426, 437, 547, 556, 906, 1201 |
| NmuCI | GTSAC | 3 cut(s) | 406, 734, 1208 |
| NspI | RCATGY | 3 cut(s) | 692, 1009, 1272 |
| OliI | CACNNNNGTG | 2 cut(s) | 404, 628 |
| PaeI | GCATGC | 1 cut(s) | 1272 |
| PaeR7I | CTCGAG | 1 cut(s) | 525 |
| PaqCI | CACCTGC | 1 cut(s) | 61 |
| PciI | ACATGT | 1 cut(s) | 688 |
| PctI | GAATGC | 2 cut(s) | 1143, 1169 |
| PdmI | GAANNNNTTC | 1 cut(s) | 799 |
| PfeI | GAWTC | 3 cut(s) | 260, 320, 533 |
| PleI | GAGTC | 2 cut(s) | 478, 719 |
| PmaCI | CACGTG | 1 cut(s) | 611 |
| PmlI | CACGTG | 1 cut(s) | 611 |
| PpsI | GAGTC | 2 cut(s) | 478, 719 |
| Ppu21I | YACGTR | 1 cut(s) | 611 |
| PscI | ACATGT | 1 cut(s) | 688 |
| Psp6I | CCWGG | 3 cut(s) | 227, 362, 484 |
| PspCI | CACGTG | 1 cut(s) | 611 |
| PspFI | CCCAGC | 1 cut(s) | 21 |
| PspGI | CCWGG | 3 cut(s) | 227, 362, 484 |
| PspN4I | GGNNCC | 7 cut(s) | 253, 426, 437, 547, 556, 906, 1201 |
| PspPI | GGNCC | 2 cut(s) | 176, 904 |
| PspXI | VCTCGAGB | 1 cut(s) | 525 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1313, 1345 |
| PstI | CTGCAG | 1 cut(s) | 897 |
| PstNI | CAGNNNCTG | 1 cut(s) | 901 |
| PsuI | RGATCY | 1 cut(s) | 25 |
| PvuII | CAGCTG | 1 cut(s) | 1223 |
| RsaI | GTAC | 2 cut(s) | 221, 790 |
| RsaNI | GTAC | 2 cut(s) | 220, 789 |
| RseI | CAYNNNNRTG | 6 cut(s) | 404, 479, 570, 628, 1082, 1178 |
| Sau3AI | GATC | 7 cut(s) | 25, 370, 465, 641, 675, 870, 1246 |
| Sau96I | GGNCC | 2 cut(s) | 176, 904 |
| ScaI | AGTACT | 1 cut(s) | 790 |
| SchI | GAGTC | 2 cut(s) | 479, 719 |
| ScrFI | CCNGG | 6 cut(s) | 229, 241, 242, 364, 486, 1140 |
| SexAI | ACCWGGT | 1 cut(s) | 362 |
| SfaNI | GCATC | 3 cut(s) | 506, 1285, 1355 |
| SfcI | CTRYAG | 3 cut(s) | 99, 384, 893 |
| Sfr274I | CTCGAG | 1 cut(s) | 525 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1202 |
| SinI | GGWCC | 2 cut(s) | 176, 904 |
| SlaI | CTCGAG | 1 cut(s) | 525 |
| SmaI | CCCGGG | 1 cut(s) | 242 |
| SmiMI | CAYNNNNRTG | 6 cut(s) | 404, 479, 570, 628, 1082, 1178 |
| SmlI | CTYRAG | 2 cut(s) | 305, 525 |
| SmoI | CTYRAG | 2 cut(s) | 305, 525 |
| SphI | GCATGC | 1 cut(s) | 1272 |
| Sse9I | AATT | 2 cut(s) | 910, 968 |
| SspI | AATATT | 1 cut(s) | 959 |
| SspMI | CTAG | 4 cut(s) | 18, 60, 941, 1350 |
| StyD4I | CCNGG | 6 cut(s) | 227, 239, 240, 362, 484, 1138 |
| StyI | CCWWGG | 3 cut(s) | 59, 1179, 1290 |
| TaaI | ACNGT | 3 cut(s) | 380, 406, 740 |
| TaiI | ACGT | 2 cut(s) | 613, 671 |
| TaqI | TCGA | 5 cut(s) | 373, 468, 526, 678, 803 |
| TasI | AATT | 2 cut(s) | 910, 968 |
| TatI | WGTACW | 2 cut(s) | 219, 788 |
| TauI | GCSGC | 8 cut(s) | 339, 345, 560, 833, 1064, 1067, 1137, 1187 |
| TfiI | GAWTC | 3 cut(s) | 260, 320, 533 |
| TscAI | CASTG | 3 cut(s) | 409, 547, 556 |
| TseFI | GTSAC | 3 cut(s) | 406, 734, 1208 |
| TseI | GCWGC | 6 cut(s) | 339, 636, 827, 892, 1223, 1313 |
| Tsp45I | GTSAC | 3 cut(s) | 406, 734, 1208 |
| TspDTI | ATGAA | 7 cut(s) | 48, 780, 827, 899, 1016, 1136, 1162 |
| TspGWI | ACGGA | 1 cut(s) | 718 |
| TspMI | CCCGGG | 1 cut(s) | 240 |
| TspRI | CASTG | 3 cut(s) | 409, 547, 556 |
| VpaK11BI | GGWCC | 2 cut(s) | 176, 904 |
| XapI | RAATTY | 1 cut(s) | 910 |
| XceI | RCATGY | 3 cut(s) | 692, 1009, 1272 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 409 |
| XhoI | CTCGAG | 1 cut(s) | 525 |
| XmaI | CCCGGG | 1 cut(s) | 240 |
| XmaJI | CCTAGG | 1 cut(s) | 59 |
| XmiI | GTMKAC | 1 cut(s) | 742 |
| XmnI | GAANNNNTTC | 1 cut(s) | 799 |
| XspI | CTAG | 4 cut(s) | 18, 60, 941, 1350 |
| ZrmI | AGTACT | 1 cut(s) | 790 |