RchiOBHm_Chr1g0348781

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0011387
Physical Location & Seq
Forward (+)
41770117 .. 41772993
2877 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57478

Sequence Viewer

Length: 1404 bp
ATGAGCCAGTGTGTTCCCAGCTGGGATCTTGATGACAGTAGTCCACCGCCGAGGCTCTCTCTTCGTTCTCACTCCAATTCCACCGCTCCTGATGTTCCCATGTTCGACTATGAAGTAGCAGAGCTGACATGGGAAAATGGCCAGGTGGCCATGCACGGCTTGGGTCTACCGCGCTTGCCTTCCAAACCTGCATCCTGGGACAAGCCACGCGCTACTGGTACTCTGGAGTCCATAGTCAACCAAGCCACCTGTACTTTGCCTCGGTTTTCCAAGCCTCCCTTTGATAACACCATCACTTCTGCCACTGGCGGTGGTGCTAACAAAGTAGTGACCTGGTTCGATCATCACTGTCGTGTTGCCACCTCCGGTGCTCCCTCCAACACCATGACCATGGACGCGTTGGTCCCTTGCAGGAACAACCAACCTGACGAACCAAACAGTAGCCTTATGATAGACTCTGTAGATACCGTGCCAGGAGTGCTCGGCAGTTCTGGCACGGGCGTGATCAATGGGTGCTCCACTCGAGTGGGGTCGTGCAGCGCTACCGCGACCCACAACGAGGACACCCGCCGACTGGGAAAACACAAGGCGGGCGTTGCACGTGTACCTGCTACACCCGAGTGCAGATCCCCCAGCGTGAGCGGTAGTGCCACGTTTGGGATGGATAGCCAGCAAGCCACACTTGATACTAAGGGAAGCGACCGTGACTCAGTTTGTCACAGCAGACCACAGGCAAGCTCTCAGGCTTTACTCCATAAATTAATGCAAAAGATAATGGATAACGACGAGGAGGAGAGAAAGAAGCGAAGTACTGGAAAATCCTCAGTTTCTACAAAAAGGAGTAGGGCTGCTGCTATACATAACCAATCTGAACGTAAAAGGAGAGATAAGATCAACCAGAGGATGAAGACGCTGCAGAAGCTGGTCCCAAATTCCAGTAAGACTGATAAAGCTTCAATGCTGGACGAAGTGATTGAATACTTGAAACAATTGCAAGCTCAAGTCCATGTGATAAGCAGAATGAACATGCCAGCCATGATGTTGCCTATGGCTATGCAGCAACAACTTCAAATGTCTATGATGGCCCCAAGAAATATGGGCATGGGGATTGGGATGGGAATGGGAATGGGAATGGGAATGGACATGAACAACATCGGCCGCCCCAACATAGGGGGAGTCCCTCCGGTTCTTCACCCAACTGCATTCATGCCCATGGCTTCATGGGATGGCTCTGCCTGCGGCGCTGAGAGGTTACAAGCTGCTTCAACGACTGTGATGCCTGATCCCTTGCCAGCATTTCTTGCATGCCAATCGCAGCCGATGACCATGGATGCTTACAGCATGATGGCGGCCATGTATCAGCAATTCCATCAGCAACCAGCAGCATCTAGTTCTAAGAGCTAA

Protein Analysis

467

Amino Acids

50.43

Weight (kDa)

8.87

Isoelectric Point (pI)

61.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 287 - 332 4.5e-14 Helix-loop-helix DNA-binding domain
bHLH_SAC51 PF23173 290 - 337 2e-08 Transcription factor SAC51 bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011387)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G00050 AT4G00050 AT4G00050
fragaria_vesca FvH4_7g10840
malus_domestica MD07G1113200.v1.1
prunus_persica Prupe.2G136300_v2.0.a1 Prupe.2G136300_v2.0.a1 Prupe.2G136300_v2.0.a1
pyrus_communis pycom07g09800
rosa_chinensis RchiOBHm_Chr1g0348781
rosa_laevigata RLG00000028624
rosa_multiflora Rmu_co8207186.1_g000001 Rmu_sc0002970.1_g000013
rosa_roxburghii Rroxscaffold_4G00306600
rosa_rugosa Rorug01G0197900
rosa_samantha Rh1AG215200 Rh1BG181500 Rh1CG199600 Rh1DG211400
rosa_wichuraiana Rw1G018230

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 401
Acc36I ACCTGC 2 cut(s) 196, 616
AccBSI CCGCTC 2 cut(s) 86, 642
AccI GTMKAC 1 cut(s) 166
AccII CGCG 4 cut(s) 172, 210, 398, 548
AclWI GGATC 3 cut(s) 33, 621, 1277
AcoI YGGCCR 4 cut(s) 139, 147, 1156, 1350
AcsI RAATTY 1 cut(s) 931
AcvI CACGTG 1 cut(s) 602
AfaI GTAC 4 cut(s) 220, 253, 606, 811
AfeI AGCGCT 1 cut(s) 541
AfiI CCNNNNNNNGG 5 cut(s) 559, 574, 657, 1169, 1170
AflIII ACRYGT 2 cut(s) 396, 601
AgsI TTSAA 5 cut(s) 957, 977, 985, 1070, 1266
AjnI CCWGG 4 cut(s) 141, 194, 332, 472
AleI CACNNNNGTG 4 cut(s) 351, 500, 524, 619
AluBI AGCT 8 cut(s) 21, 124, 738, 922, 953, 998, 1259, 1401
AluI AGCT 8 cut(s) 21, 124, 738, 922, 953, 998, 1259, 1401
Alw21I GWGCWC 3 cut(s) 373, 483, 518
AlwI GGATC 3 cut(s) 33, 621, 1277
AlwNI CAGNNNCTG 1 cut(s) 922
Ama87I CYCGRG 2 cut(s) 522, 617
Aor51HI AGCGCT 1 cut(s) 541
AoxI GGCC 5 cut(s) 139, 147, 1083, 1156, 1350
ApeKI GCWGC 8 cut(s) 537, 848, 851, 913, 1057, 1259, 1315, 1382
ApoI RAATTY 1 cut(s) 931
AseI ATTAAT 1 cut(s) 761
AspLEI GCGC 4 cut(s) 174, 212, 542, 1244
AspS9I GGNCC 3 cut(s) 403, 925, 1084
AsuHPI GGTGA 1 cut(s) 1184
AvaI CYCGRG 2 cut(s) 522, 617
AvaII GGWCC 2 cut(s) 403, 925
BalI TGGCCA 2 cut(s) 141, 149
BbrPI CACGTG 1 cut(s) 602
BbsI GAAGAC 1 cut(s) 914
Bbv12I GWGCWC 3 cut(s) 373, 483, 518
BbvI GCAGC 8 cut(s) 549, 835, 838, 900, 1069, 1246, 1327, 1394
BccI CCATC 7 cut(s) 299, 655, 1075, 1108, 1220, 1339, 1377
BceAI ACGGC 1 cut(s) 172
BcgI CGANNNNNNTGC 4 cut(s) 1258, 1292, 1293, 1327
BciT130I CCWGG 4 cut(s) 143, 196, 334, 474
BclI TGATCA 1 cut(s) 504
BfaI CTAG 1 cut(s) 1389
BfmI CTRYAG 2 cut(s) 459, 914
BfoI RGCGCY 2 cut(s) 543, 1245
BfuAI ACCTGC 2 cut(s) 196, 616
BmcAI AGTACT 1 cut(s) 811
Bme1390I CCNGG 4 cut(s) 143, 196, 334, 474
Bme18I GGWCC 2 cut(s) 403, 925
BmeT110I CYCGRG 2 cut(s) 522, 617
BmgT120I GGNCC 3 cut(s) 403, 925, 1084
BmiI GGNNCC 3 cut(s) 405, 927, 1086
BmrFI CCNGG 4 cut(s) 143, 196, 334, 474
BmrI ACTGGG 1 cut(s) 584
BmsI GCATC 4 cut(s) 200, 1266, 1321, 1394
BmuI ACTGGG 1 cut(s) 584
BoxI GACNNNNGTC 1 cut(s) 39
BpiI GAAGAC 1 cut(s) 914
BplI GAGNNNNNCTC 2 cut(s) 43, 75
BpmI CTGGAG 1 cut(s) 245
BpuEI CTTGAG 1 cut(s) 984
BsaAI YACGTR 1 cut(s) 602
BsaJI CCNNGG 6 cut(s) 50, 195, 260, 390, 1212, 1326
BsaWI WCCGGW 2 cut(s) 365, 1183
Bsc4I CCNNNNNNNGG 5 cut(s) 559, 574, 657, 1169, 1170
Bse1I ACTGG 6 cut(s) 7, 220, 310, 579, 817, 936
BseBI CCWGG 4 cut(s) 143, 196, 334, 474
BseDI CCNNGG 6 cut(s) 50, 195, 260, 390, 1212, 1326
BseGI GGATG 6 cut(s) 191, 666, 909, 1119, 1231, 1336
BseLI CCNNNNNNNGG 5 cut(s) 559, 574, 657, 1169, 1170
BseMII CTCAG 4 cut(s) 723, 755, 837, 1236
BseNI ACTGG 6 cut(s) 7, 220, 310, 579, 817, 936
BseRI GAGGAG 2 cut(s) 803, 806
BseX3I CGGCCG 1 cut(s) 1156
BseXI GCAGC 8 cut(s) 549, 835, 838, 900, 1069, 1246, 1327, 1394
BseYI CCCAGC 3 cut(s) 17, 21, 632
BsgI GTGCAG 2 cut(s) 556, 643
Bsh1236I CGCG 4 cut(s) 172, 210, 398, 548
Bsh1285I CGRYCG 2 cut(s) 703, 1159
BshFI GGCC 5 cut(s) 141, 149, 1085, 1158, 1352
BsiEI CGRYCG 2 cut(s) 703, 1159
BsiHKAI GWGCWC 3 cut(s) 373, 483, 518
BsiHKCI CYCGRG 2 cut(s) 522, 617
BsiSI CCGG 2 cut(s) 366, 1184
BslFI GGGAC 4 cut(s) 212, 389, 911, 1163
BslI CCNNNNNNNGG 5 cut(s) 559, 574, 657, 1169, 1170
BsmFI GGGAC 4 cut(s) 212, 389, 911, 1163
BsmI GAATGC 1 cut(s) 1202
BsnI GGCC 5 cut(s) 141, 149, 1085, 1158, 1352
BsoBI CYCGRG 2 cut(s) 522, 617
Bsp1286I GDGCHC 3 cut(s) 373, 483, 518
Bsp143I GATC 6 cut(s) 25, 340, 504, 626, 891, 1282
Bsp19I CCATGG 3 cut(s) 390, 1212, 1326
BspANI GGCC 5 cut(s) 141, 149, 1085, 1158, 1352
BspCNI CTCAG 4 cut(s) 722, 754, 836, 1237
BspFNI CGCG 4 cut(s) 172, 210, 398, 548
BspLI GGNNCC 3 cut(s) 405, 927, 1086
BspMAI CTGCAG 1 cut(s) 918
BspMI ACCTGC 2 cut(s) 196, 616
BspPI GGATC 3 cut(s) 33, 621, 1277
BsrBI CCGCTC 2 cut(s) 86, 642
BsrI ACTGG 6 cut(s) 7, 220, 310, 579, 817, 936
BssECI CCNNGG 6 cut(s) 50, 195, 260, 390, 1212, 1326
BssMI GATC 6 cut(s) 25, 340, 504, 626, 891, 1282
BssT1I CCWWGG 3 cut(s) 390, 1212, 1326
Bst2UI CCWGG 4 cut(s) 143, 196, 334, 474
Bst4CI ACNGT 6 cut(s) 38, 350, 440, 469, 704, 1273
Bst6I CTCTTC 1 cut(s) 66
BstAPI GCANNNNNTGC 1 cut(s) 1301
BstBAI YACGTR 1 cut(s) 602
BstDEI CTNAG 6 cut(s) 690, 709, 741, 823, 1245, 1395
BstDSI CCRYGG 3 cut(s) 390, 1212, 1326
BstF5I GGATG 6 cut(s) 191, 666, 909, 1119, 1231, 1336
BstFNI CGCG 4 cut(s) 172, 210, 398, 548
BstH2I RGCGCY 2 cut(s) 543, 1245
BstHHI GCGC 4 cut(s) 174, 212, 542, 1244
BstKTI GATC 6 cut(s) 28, 343, 507, 629, 894, 1285
BstMBI GATC 6 cut(s) 25, 340, 504, 626, 891, 1282
BstMCI CGRYCG 2 cut(s) 703, 1159
BstMWI GCNNNNNNNGC 7 cut(s) 478, 492, 596, 919, 1236, 1241, 1301
BstNI CCWGG 4 cut(s) 143, 196, 334, 474
BstNSI RCATGY 2 cut(s) 1030, 1308
BstPAI GACNNNNGTC 1 cut(s) 39
BstSCI CCNGG 4 cut(s) 141, 194, 332, 472
BstSFI CTRYAG 2 cut(s) 459, 914
BstUI CGCG 4 cut(s) 172, 210, 398, 548
BstV1I GCAGC 8 cut(s) 549, 835, 838, 900, 1069, 1246, 1327, 1394
BstV2I GAAGAC 1 cut(s) 914
BstX2I RGATCY 2 cut(s) 25, 626
BstXI CCANNNNNNTGG 2 cut(s) 391, 526
BstYI RGATCY 2 cut(s) 25, 626
BstZI CGGCCG 1 cut(s) 1156
BsuRI GGCC 5 cut(s) 141, 149, 1085, 1158, 1352
BtgI CCRYGG 3 cut(s) 390, 1212, 1326
BtsCI GGATG 6 cut(s) 191, 666, 909, 1119, 1231, 1336
BtsIMutI CAGTG 3 cut(s) 14, 303, 346
BveI ACCTGC 2 cut(s) 196, 616
CaiI CAGNNNCTG 1 cut(s) 922
CfoI GCGC 4 cut(s) 174, 212, 542, 1244
Cfr13I GGNCC 3 cut(s) 403, 925, 1084
CseI GACGC 2 cut(s) 404, 919
CsiI ACCWGGT 1 cut(s) 332
Csp6I GTAC 4 cut(s) 219, 252, 605, 810
CviQI GTAC 4 cut(s) 219, 252, 605, 810
DdeI CTNAG 6 cut(s) 690, 709, 741, 823, 1245, 1395
DpnI GATC 6 cut(s) 27, 342, 506, 628, 893, 1284
DpnII GATC 6 cut(s) 25, 340, 504, 626, 891, 1282
DrdI GACNNNNNNGTC 1 cut(s) 401
DseDI GACNNNNNNGTC 1 cut(s) 401
EaeI YGGCCR 4 cut(s) 139, 147, 1156, 1350
EagI CGGCCG 1 cut(s) 1156
Eam1104I CTCTTC 1 cut(s) 66
EarI CTCTTC 1 cut(s) 66
EclXI CGGCCG 1 cut(s) 1156
Eco130I CCWWGG 3 cut(s) 390, 1212, 1326
Eco47I GGWCC 2 cut(s) 403, 925
Eco47III AGCGCT 1 cut(s) 541
Eco52I CGGCCG 1 cut(s) 1156
Eco72I CACGTG 1 cut(s) 602
Eco88I CYCGRG 2 cut(s) 522, 617
EcoRII CCWGG 4 cut(s) 141, 194, 332, 472
EcoT14I CCWWGG 3 cut(s) 390, 1212, 1326
ErhI CCWWGG 3 cut(s) 390, 1212, 1326
FalI AAGNNNNNCTT 4 cut(s) 263, 295, 666, 698
FaqI GGGAC 4 cut(s) 212, 389, 911, 1163
FauI CCCGC 2 cut(s) 575, 583
FbaI TGATCA 1 cut(s) 504
FblI GTMKAC 1 cut(s) 166
FokI GGATG 6 cut(s) 178, 673, 916, 1126, 1238, 1343
FspBI CTAG 1 cut(s) 1389
GlaI GCGC 4 cut(s) 173, 211, 541, 1243
GsaI CCCAGC 3 cut(s) 21, 25, 636
GsuI CTGGAG 1 cut(s) 245
HaeII RGCGCY 2 cut(s) 543, 1245
HaeIII GGCC 5 cut(s) 141, 149, 1085, 1158, 1352
HapII CCGG 2 cut(s) 366, 1184
HgaI GACGC 2 cut(s) 404, 919
HhaI GCGC 4 cut(s) 174, 212, 542, 1244
Hin6I GCGC 4 cut(s) 172, 210, 540, 1242
HinP1I GCGC 4 cut(s) 172, 210, 540, 1242
HincII GTYRAC 1 cut(s) 238
HindII GTYRAC 1 cut(s) 238
HindIII AAGCTT 1 cut(s) 951
HinfI GANTC 4 cut(s) 227, 455, 707, 1176
HpaII CCGG 2 cut(s) 366, 1184
HphI GGTGA 1 cut(s) 1184
Hpy166II GTNNAC 4 cut(s) 44, 167, 238, 605
Hpy188I TCNGA 1 cut(s) 871
Hpy188III TCNNGA 3 cut(s) 29, 89, 224
Hpy8I GTNNAC 4 cut(s) 44, 167, 238, 605
Hpy99I CGWCG 1 cut(s) 788
HpyAV CCTTC 1 cut(s) 189
HpyCH4III ACNGT 6 cut(s) 38, 350, 440, 469, 704, 1273
HpyCH4IV ACGT 3 cut(s) 601, 653, 874
HpyF10VI GCNNNNNNNGC 7 cut(s) 478, 492, 596, 919, 1236, 1241, 1301
HpyF3I CTNAG 6 cut(s) 690, 709, 741, 823, 1245, 1395
HpySE526I ACGT 3 cut(s) 601, 653, 874
HspAI GCGC 4 cut(s) 172, 210, 540, 1242
Ksp22I TGATCA 1 cut(s) 504
Kzo9I GATC 6 cut(s) 25, 340, 504, 626, 891, 1282
LmnI GCTCC 3 cut(s) 91, 376, 521
Lsp1109I GCAGC 8 cut(s) 549, 835, 838, 900, 1069, 1246, 1327, 1394
LweI GCATC 4 cut(s) 200, 1266, 1321, 1394
MabI ACCWGGT 1 cut(s) 332
MaeI CTAG 1 cut(s) 1389
MaeII ACGT 3 cut(s) 601, 653, 874
MaeIII GTNAC 4 cut(s) 328, 704, 716, 1251
MalI GATC 6 cut(s) 27, 342, 506, 628, 893, 1284
MbiI CCGCTC 2 cut(s) 86, 642
MboI GATC 6 cut(s) 25, 340, 504, 626, 891, 1282
MboII GAAGA 3 cut(s) 53, 919, 1181
MfeI CAATTG 1 cut(s) 989
MflI RGATCY 2 cut(s) 25, 626
MhlI GDGCHC 3 cut(s) 373, 483, 518
MlsI TGGCCA 2 cut(s) 141, 149
MluCI AATT 5 cut(s) 76, 758, 931, 989, 1364
MluI ACGCGT 1 cut(s) 396
MluNI TGGCCA 2 cut(s) 141, 149
MlyI GAGTC 4 cut(s) 236, 449, 701, 1185
MmeI TCCRAC 1 cut(s) 402
Mox20I TGGCCA 2 cut(s) 141, 149
MscI TGGCCA 2 cut(s) 141, 149
MseI TTAA 1 cut(s) 761
MslI CAYNNNNRTG 6 cut(s) 351, 389, 500, 524, 619, 1211
Msp20I TGGCCA 2 cut(s) 141, 149
MspA1I CMGCKG 1 cut(s) 21
MspI CCGG 2 cut(s) 366, 1184
MspR9I CCNGG 4 cut(s) 143, 196, 334, 474
MunI CAATTG 1 cut(s) 989
Mva1269I GAATGC 1 cut(s) 1202
MvaI CCWGG 4 cut(s) 143, 196, 334, 474
MvnI CGCG 4 cut(s) 172, 210, 398, 548
MwoI GCNNNNNNNGC 7 cut(s) 478, 492, 596, 919, 1236, 1241, 1301
NcoI CCATGG 3 cut(s) 390, 1212, 1326
NdeII GATC 6 cut(s) 25, 340, 504, 626, 891, 1282
NlaIV GGNNCC 3 cut(s) 405, 927, 1086
NmeAIII GCCGAG 2 cut(s) 75, 462
NmuCI GTSAC 3 cut(s) 328, 704, 716
NspI RCATGY 2 cut(s) 1030, 1308
OliI CACNNNNGTG 4 cut(s) 351, 500, 524, 619
PaeI GCATGC 1 cut(s) 1308
PaeR7I CTCGAG 1 cut(s) 522
PctI GAATGC 1 cut(s) 1202
PleI GAGTC 4 cut(s) 235, 449, 701, 1184
PmaCI CACGTG 1 cut(s) 602
PmlI CACGTG 1 cut(s) 602
PpsI GAGTC 4 cut(s) 235, 449, 701, 1184
Ppu21I YACGTR 1 cut(s) 602
PshAI GACNNNNGTC 1 cut(s) 39
PshBI ATTAAT 1 cut(s) 761
Psp6I CCWGG 4 cut(s) 141, 194, 332, 472
PspCI CACGTG 1 cut(s) 602
PspFI CCCAGC 3 cut(s) 17, 21, 632
PspGI CCWGG 4 cut(s) 141, 194, 332, 472
PspN4I GGNNCC 3 cut(s) 405, 927, 1086
PspPI GGNCC 3 cut(s) 403, 925, 1084
PspXI VCTCGAGB 1 cut(s) 522
PstI CTGCAG 1 cut(s) 918
PstNI CAGNNNCTG 1 cut(s) 922
PsuI RGATCY 2 cut(s) 25, 626
PvuII CAGCTG 1 cut(s) 21
RsaI GTAC 4 cut(s) 220, 253, 606, 811
RsaNI GTAC 4 cut(s) 219, 252, 605, 810
RseI CAYNNNNRTG 6 cut(s) 351, 389, 500, 524, 619, 1211
SaqAI TTAA 1 cut(s) 761
Sau3AI GATC 6 cut(s) 25, 340, 504, 626, 891, 1282
Sau96I GGNCC 3 cut(s) 403, 925, 1084
ScaI AGTACT 1 cut(s) 811
SchI GAGTC 4 cut(s) 236, 449, 701, 1185
ScrFI CCNGG 4 cut(s) 143, 196, 334, 474
SduI GDGCHC 3 cut(s) 373, 483, 518
SexAI ACCWGGT 1 cut(s) 332
SfaNI GCATC 4 cut(s) 200, 1266, 1321, 1394
SfcI CTRYAG 2 cut(s) 459, 914
Sfr274I CTCGAG 1 cut(s) 522
SinI GGWCC 2 cut(s) 403, 925
SlaI CTCGAG 1 cut(s) 522
SmiMI CAYNNNNRTG 6 cut(s) 351, 389, 500, 524, 619, 1211
SmlI CTYRAG 2 cut(s) 522, 999
SmoI CTYRAG 2 cut(s) 522, 999
SphI GCATGC 1 cut(s) 1308
Sse9I AATT 5 cut(s) 76, 758, 931, 989, 1364
SspMI CTAG 1 cut(s) 1389
StyD4I CCNGG 4 cut(s) 141, 194, 332, 472
StyI CCWWGG 3 cut(s) 390, 1212, 1326
TaaI ACNGT 6 cut(s) 38, 350, 440, 469, 704, 1273
TaiI ACGT 3 cut(s) 604, 656, 877
TaqI TCGA 3 cut(s) 105, 339, 523
TasI AATT 5 cut(s) 76, 758, 931, 989, 1364
TatI WGTACW 2 cut(s) 251, 809
TauI GCSGC 3 cut(s) 1161, 1242, 1352
Tru1I TTAA 1 cut(s) 761
Tru9I TTAA 1 cut(s) 761
TscAI CASTG 3 cut(s) 14, 310, 353
TseFI GTSAC 3 cut(s) 328, 704, 716
TseI GCWGC 8 cut(s) 537, 848, 851, 913, 1057, 1259, 1315, 1382
Tsp45I GTSAC 3 cut(s) 328, 704, 716
TspDTI ATGAA 6 cut(s) 126, 920, 1037, 1160, 1195, 1209
TspRI CASTG 3 cut(s) 14, 310, 353
VpaK11BI GGWCC 2 cut(s) 403, 925
VspI ATTAAT 1 cut(s) 761
XapI RAATTY 1 cut(s) 931
XceI RCATGY 2 cut(s) 1030, 1308
XcmI CCANNNNNNNNNTGG 3 cut(s) 157, 397, 658
XhoI CTCGAG 1 cut(s) 522
XmiI GTMKAC 1 cut(s) 166
XspI CTAG 1 cut(s) 1389
ZrmI AGTACT 1 cut(s) 811
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.