Prupe.2G148300_v2.0.a1

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
20409727 .. 20415649
5923 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G148300.2

Sequence Viewer

Length: 1491 bp
ATGAGTTTCCTCAAAGGGATCATCGATTCTTTTGGTTCGGTCTTCTCCGCCGCCTCCTCCTCATACGAGTCTCACCCAAACTCTGATTCTCCCCCAAATTCGTCAACCATGGAAGGCGTAGCTGGACCTGGAGCTTCGGTCTCCAACGAGCGTGTTGCGTACAAGCTTAGGGGGTACTTCGATTTGGCAAAGGATGAGATCGCCAAGGCTGTTAGGGCTGAAGAGTGGGGCTTAGTCGACGACGCCATTGCTCACTATAACAACGCCCAGAGAGTTCTCGTTGAAGCAACGTCCACTCCCGTGCCTTCCTATATCAGCCACAGTGAGCGAGAGAAGGTCAAATCTTATCGCCAAAAAATATCAAAATGGCAGGGTGAAGTTTCTGAAAGGTTACAGGCCTTAAGTAGGCGAGCAGGTGGCACGTCTGTAAGCAATAGTACCTTAGCTCATGCGCAGACTGCTGTAGTTAGACCAACGACATCAAATGCCAGAAAGCATGTGTTACCCAAGTCTCCTCGTCCCACTACAAACAGACCCGAAACGAGGAATCAGATTCAGACCAATAATATTGTAAGCTCAAAACCTGTGCAAGAGACTGGTGGTGGTTATGATGCAAAATTGGTGGAAATGATAAATAGTGCTATAGTGGATAGAAGCCCTTCAGTTAAGTGGGAAGATGTAGCCGGTCTTGAGAAGGTTAAGAAAACTTTGATGGAGATGGTTATTTTACCAACTAAGAGAAGAGACTTGTTCACTGGTCTTCGAAGGCCAGCTAGAGGTCTGCTTTTGTTCGGTCCACCTGGTAATGGGAAGACCATGCTTGCTAAGGCAGTTGCTTCAGAGTCCGAGGCAACATTTTTTAATGTATCTGCTTCTTCACTGACATCAAAATGGGTAGGAGAGGCTGAAAAGCTTGTGCGAACCCTTTTCATGGTTGCTATATCCAAACAGCCGTCAGTAATTTTCATGGATGAAATTGATAGTATCATGTCAACAAGGCTTGCAAATGAACATGATGCAAGCAGAAGGCTGAAGTCAGAGTTTTTAATACAGTTTGATGGGGTGACATCTAATCCTAATGATCTGGTAATTGTGATTGGTGCTACTAATAAGCCACAAGAACTGGATGATGCGGTTCTTAGAAGACTGGTGAAGAGAGTGTACATACCTTTACCAGATTTAACAGCAAGGAGACTGCTTCTAAGGCACAAACTCAAGGGCCAAGCGTTTTCCTTACCAAGTGGAGATCTTGAAAGACTTGCAAGAGAGACAGAAGGATATTCAGGAAGTGATCTGCAAGCGCTGTGTGAAGAAGCTGCAATGATGCCTATTAGGGAACTGGGTGAAAACATTCTCACCGTCAAGGCAAATCAGGTAAGACCACTAAGATATGAAGATTTTGAGAAGGCAATGACCGTAATCAGGCCAAGCTTAAGCAAAAGCAAGTGGGAAGAGCTTGAACAGTGGAACAAGGACTTCGGCTCTAATTGA

Protein Analysis

497

Amino Acids

54.88

Weight (kDa)

9.32

Isoelectric Point (pI)

45.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 404
Acc16I TGCGCA 1 cut(s) 453
Acc36I ACCTGC 1 cut(s) 404
AccI GTMKAC 1 cut(s) 237
AciI CCGC 3 cut(s) 48, 51, 1133
AclWI GGATC 1 cut(s) 26
AcsI RAATTY 1 cut(s) 97
AcuI CTGAAG 4 cut(s) 240, 645, 822, 1052
AcyI GRCGYC 1 cut(s) 243
AfaI GTAC 4 cut(s) 161, 176, 439, 1163
AfeI AGCGCT 1 cut(s) 1302
AfiI CCNNNNNNNGG 6 cut(s) 405, 543, 776, 806, 931, 1422
AflII CTTAAG 2 cut(s) 400, 1432
AgsI TTSAA 3 cut(s) 284, 1253, 1460
AjiI CACGTC 1 cut(s) 423
AjnI CCWGG 2 cut(s) 127, 799
AjuI GAANNNNNNNTTGG 2 cut(s) 70, 102
AleI CACNNNNGTG 1 cut(s) 299
Alw26I GTCTC 7 cut(s) 75, 145, 516, 587, 738, 1186, 1262
AlwI GGATC 1 cut(s) 26
Aor51HI AGCGCT 1 cut(s) 1302
AoxI GGCC 4 cut(s) 396, 767, 1219, 1424
ApeKI GCWGC 1 cut(s) 1316
ApoI RAATTY 1 cut(s) 97
Asp700I GAANNNNTTC 2 cut(s) 658, 1350
AspLEI GCGC 2 cut(s) 454, 1303
AspS9I GGNCC 3 cut(s) 125, 794, 1219
AsuHPI GGTGA 6 cut(s) 65, 386, 1075, 1162, 1348, 1355
AsuII TTCGAA 1 cut(s) 763
AvaII GGWCC 2 cut(s) 125, 794
BarI GAAGNNNNNNTAC 2 cut(s) 1145, 1177
BbsI GAAGAC 4 cut(s) 34, 752, 818, 1150
BbvI GCAGC 1 cut(s) 1303
BccI CCATC 3 cut(s) 706, 712, 1052
BceAI ACGGC 1 cut(s) 937
BcgI CGANNNNNNTGC 4 cut(s) 137, 171, 230, 264
BciT130I CCWGG 2 cut(s) 129, 801
BcoDI GTCTC 7 cut(s) 75, 145, 516, 587, 738, 1186, 1262
BfaI CTAG 1 cut(s) 774
BfmI CTRYAG 2 cut(s) 462, 642
BfoI RGCGCY 1 cut(s) 1304
BfrI CTTAAG 2 cut(s) 400, 1432
BfuAI ACCTGC 1 cut(s) 404
BglII AGATCT 1 cut(s) 1246
BisI GCNGC 2 cut(s) 51, 1317
BlsI GCNGC 2 cut(s) 52, 1318
Bme1390I CCNGG 2 cut(s) 129, 801
Bme18I GGWCC 2 cut(s) 125, 794
BmgBI CACGTC 1 cut(s) 423
BmgT120I GGNCC 3 cut(s) 125, 794, 1219
BmrFI CCNGG 2 cut(s) 129, 801
BmrI ACTGGG 1 cut(s) 1349
BmsI GCATC 4 cut(s) 601, 1006, 1120, 1314
BmuI ACTGGG 1 cut(s) 1349
BpiI GAAGAC 4 cut(s) 34, 752, 818, 1150
BpmI CTGGAG 1 cut(s) 150
Bpu10I CCTNAGC 3 cut(s) 167, 442, 825
Bpu14I TTCGAA 1 cut(s) 763
BpuEI CTTGAG 2 cut(s) 710, 1199
Bsa29I ATCGAT 1 cut(s) 24
BsaHI GRCGYC 1 cut(s) 243
BsaI GGTCTC 1 cut(s) 145
BsaJI CCNNGG 3 cut(s) 108, 204, 846
BsaXI ACNNNNNCTCC 4 cut(s) 123, 153, 280, 310
Bsc4I CCNNNNNNNGG 6 cut(s) 405, 543, 776, 806, 931, 1422
Bse118I RCCGGY 1 cut(s) 683
Bse1I ACTGG 5 cut(s) 601, 760, 1128, 1152, 1344
Bse3DI GCAATG 3 cut(s) 246, 1326, 1416
BseBI CCWGG 2 cut(s) 129, 801
BseCI ATCGAT 1 cut(s) 24
BseDI CCNNGG 3 cut(s) 108, 204, 846
BseGI GGATG 3 cut(s) 199, 976, 1132
BseLI CCNNNNNNNGG 6 cut(s) 405, 543, 776, 806, 931, 1422
BseMI GCAATG 3 cut(s) 246, 1326, 1416
BseNI ACTGG 5 cut(s) 601, 760, 1128, 1152, 1344
BseRI GAGGAG 3 cut(s) 46, 49, 504
BseXI GCAGC 1 cut(s) 1303
BshFI GGCC 4 cut(s) 398, 769, 1221, 1426
BshVI ATCGAT 1 cut(s) 24
BsiSI CCGG 1 cut(s) 684
BslFI GGGAC 1 cut(s) 504
BslI CCNNNNNNNGG 6 cut(s) 405, 543, 776, 806, 931, 1422
BsmAI GTCTC 7 cut(s) 75, 145, 516, 587, 738, 1186, 1262
BsmFI GGGAC 1 cut(s) 504
BsnI GGCC 4 cut(s) 398, 769, 1221, 1426
Bso31I GGTCTC 1 cut(s) 145
Bsp119I TTCGAA 1 cut(s) 763
Bsp1407I TGTACA 1 cut(s) 1161
Bsp143I GATC 5 cut(s) 18, 198, 1081, 1246, 1291
Bsp19I CCATGG 1 cut(s) 108
BspACI CCGC 3 cut(s) 48, 51, 1133
BspANI GGCC 4 cut(s) 398, 769, 1221, 1426
BspDI ATCGAT 1 cut(s) 24
BspMI ACCTGC 1 cut(s) 404
BspPI GGATC 1 cut(s) 26
BspQI GCTCTTC 1 cut(s) 1446
BspT104I TTCGAA 1 cut(s) 763
BspTI CTTAAG 2 cut(s) 400, 1432
BspTNI GGTCTC 1 cut(s) 145
BsrDI GCAATG 3 cut(s) 246, 1326, 1416
BsrFI RCCGGY 1 cut(s) 683
BsrGI TGTACA 1 cut(s) 1161
BsrI ACTGG 5 cut(s) 601, 760, 1128, 1152, 1344
BssAI RCCGGY 1 cut(s) 683
BssECI CCNNGG 3 cut(s) 108, 204, 846
BssMI GATC 5 cut(s) 18, 198, 1081, 1246, 1291
BssNI GRCGYC 1 cut(s) 243
BssT1I CCWWGG 2 cut(s) 108, 204
Bst2UI CCWGG 2 cut(s) 129, 801
Bst4CI ACNGT 5 cut(s) 323, 1053, 1360, 1417, 1464
Bst6I CTCTTC 4 cut(s) 216, 736, 1148, 1446
BstACI GRCGYC 1 cut(s) 243
BstAFI CTTAAG 2 cut(s) 400, 1432
BstAUI TGTACA 1 cut(s) 1161
BstBI TTCGAA 1 cut(s) 763
BstC8I GCNNGC 6 cut(s) 411, 771, 822, 1002, 1021, 1299
BstDEI CTNAG 8 cut(s) 167, 232, 442, 735, 825, 1139, 1202, 1385
BstDSI CCRYGG 1 cut(s) 108
BstENI CCTNNNNNAGG 1 cut(s) 403
BstF5I GGATG 3 cut(s) 199, 976, 1132
BstH2I RGCGCY 1 cut(s) 1304
BstHHI GCGC 2 cut(s) 454, 1303
BstKTI GATC 5 cut(s) 21, 201, 1084, 1249, 1294
BstMAI GTCTC 7 cut(s) 75, 145, 516, 587, 738, 1186, 1262
BstMBI GATC 5 cut(s) 18, 198, 1081, 1246, 1291
BstMWI GCNNNNNNNGC 3 cut(s) 215, 458, 1204
BstNI CCWGG 2 cut(s) 129, 801
BstNSI RCATGY 1 cut(s) 500
BstSCI CCNGG 2 cut(s) 127, 799
BstSFI CTRYAG 2 cut(s) 462, 642
BstV1I GCAGC 1 cut(s) 1303
BstV2I GAAGAC 4 cut(s) 34, 752, 818, 1150
BstX2I RGATCY 1 cut(s) 1246
BstYI RGATCY 1 cut(s) 1246
Bsu15I ATCGAT 1 cut(s) 24
BsuRI GGCC 4 cut(s) 398, 769, 1221, 1426
BsuTUI ATCGAT 1 cut(s) 24
BtgI CCRYGG 1 cut(s) 108
BtrI CACGTC 1 cut(s) 423
BtsCI GGATG 3 cut(s) 199, 976, 1132
BtsIMutI CAGTG 4 cut(s) 328, 753, 878, 1469
BveI ACCTGC 1 cut(s) 404
Cac8I GCNNGC 6 cut(s) 411, 771, 822, 1002, 1021, 1299
CfoI GCGC 2 cut(s) 454, 1303
Cfr10I RCCGGY 1 cut(s) 683
Cfr13I GGNCC 3 cut(s) 125, 794, 1219
ClaI ATCGAT 1 cut(s) 24
CseI GACGC 1 cut(s) 251
CsiI ACCWGGT 1 cut(s) 799
Csp6I GTAC 4 cut(s) 160, 175, 438, 1162
CspCI CAANNNNNGTGG 2 cut(s) 603, 638
CviAII CATG 8 cut(s) 109, 449, 497, 817, 931, 967, 988, 1013
CviQI GTAC 4 cut(s) 160, 175, 438, 1162
DdeI CTNAG 8 cut(s) 167, 232, 442, 735, 825, 1139, 1202, 1385
DpnI GATC 5 cut(s) 20, 200, 1083, 1248, 1293
DpnII GATC 5 cut(s) 18, 198, 1081, 1246, 1291
Eam1104I CTCTTC 4 cut(s) 216, 736, 1148, 1446
EarI CTCTTC 4 cut(s) 216, 736, 1148, 1446
EciI GGCGGA 1 cut(s) 37
Eco130I CCWWGG 2 cut(s) 108, 204
Eco147I AGGCCT 1 cut(s) 398
Eco31I GGTCTC 1 cut(s) 145
Eco47I GGWCC 2 cut(s) 125, 794
Eco47III AGCGCT 1 cut(s) 1302
Eco57I CTGAAG 4 cut(s) 240, 645, 822, 1052
EcoNI CCTNNNNNAGG 1 cut(s) 403
EcoRII CCWGG 2 cut(s) 127, 799
EcoT14I CCWWGG 2 cut(s) 108, 204
ErhI CCWWGG 2 cut(s) 108, 204
FaeI CATG 8 cut(s) 112, 452, 500, 820, 934, 970, 991, 1016
FaqI GGGAC 1 cut(s) 504
FatI CATG 8 cut(s) 108, 448, 496, 816, 930, 966, 987, 1012
FblI GTMKAC 1 cut(s) 237
Fnu4HI GCNGC 2 cut(s) 51, 1317
FokI GGATG 3 cut(s) 206, 983, 1139
Fsp4HI GCNGC 2 cut(s) 51, 1317
FspBI CTAG 1 cut(s) 774
FspI TGCGCA 1 cut(s) 453
GlaI GCGC 2 cut(s) 453, 1302
GluI GCNGC 2 cut(s) 51, 1317
GsuI CTGGAG 1 cut(s) 150
HaeII RGCGCY 1 cut(s) 1304
HaeIII GGCC 4 cut(s) 398, 769, 1221, 1426
HapII CCGG 1 cut(s) 684
HgaI GACGC 1 cut(s) 251
HhaI GCGC 2 cut(s) 454, 1303
Hin1I GRCGYC 1 cut(s) 243
Hin1II CATG 8 cut(s) 112, 452, 500, 820, 934, 970, 991, 1016
Hin6I GCGC 2 cut(s) 452, 1301
HinP1I GCGC 2 cut(s) 452, 1301
HincII GTYRAC 3 cut(s) 105, 238, 993
HindII GTYRAC 3 cut(s) 105, 238, 993
HindIII AAGCTT 3 cut(s) 164, 911, 1429
HinfI GANTC 6 cut(s) 26, 68, 86, 547, 553, 842
HpaII CCGG 1 cut(s) 684
HphI GGTGA 6 cut(s) 65, 386, 1075, 1162, 1348, 1355
Hpy166II GTNNAC 7 cut(s) 105, 238, 294, 753, 797, 993, 1162
Hpy188I TCNGA 7 cut(s) 85, 385, 552, 558, 841, 847, 1039
Hpy188III TCNNGA 3 cut(s) 689, 1250, 1284
Hpy8I GTNNAC 7 cut(s) 105, 238, 294, 753, 797, 993, 1162
Hpy99I CGWCG 2 cut(s) 242, 245
HpyAV CCTTC 9 cut(s) 107, 315, 328, 669, 688, 759, 1020, 1268, 1399
HpyCH4III ACNGT 5 cut(s) 323, 1053, 1360, 1417, 1464
HpyCH4IV ACGT 2 cut(s) 290, 422
HpyCH4V TGCA 7 cut(s) 589, 614, 1004, 1019, 1262, 1297, 1319
HpyF10VI GCNNNNNNNGC 3 cut(s) 215, 458, 1204
HpyF3I CTNAG 8 cut(s) 167, 232, 442, 735, 825, 1139, 1202, 1385
HpySE526I ACGT 2 cut(s) 290, 422
Hsp92I GRCGYC 1 cut(s) 243
Hsp92II CATG 8 cut(s) 112, 452, 500, 820, 934, 970, 991, 1016
HspAI GCGC 2 cut(s) 452, 1301
Kzo9I GATC 5 cut(s) 18, 198, 1081, 1246, 1291
LguI GCTCTTC 1 cut(s) 1446
LmnI GCTCC 1 cut(s) 131
Lsp1109I GCAGC 1 cut(s) 1303
LweI GCATC 4 cut(s) 601, 1006, 1120, 1314
MabI ACCWGGT 1 cut(s) 799
MaeI CTAG 1 cut(s) 774
MaeII ACGT 2 cut(s) 290, 422
MaeIII GTNAC 3 cut(s) 390, 501, 1063
MalI GATC 5 cut(s) 20, 200, 1083, 1248, 1293
MboI GATC 5 cut(s) 18, 198, 1081, 1246, 1291
MflI RGATCY 1 cut(s) 1246
MluCI AATT 6 cut(s) 97, 617, 960, 975, 1089, 1486
MlyI GAGTC 2 cut(s) 77, 851
MmeI TCCRAC 1 cut(s) 168
MnlI CCTC 9 cut(s) 20, 64, 67, 70, 525, 537, 770, 841, 895
MroXI GAANNNNTTC 2 cut(s) 658, 1350
MseI TTAA 7 cut(s) 401, 666, 699, 861, 1046, 1181, 1433
MslI CAYNNNNRTG 2 cut(s) 299, 889
MspCI CTTAAG 2 cut(s) 400, 1432
MspI CCGG 1 cut(s) 684
MspR9I CCNGG 2 cut(s) 129, 801
MvaI CCWGG 2 cut(s) 129, 801
MwoI GCNNNNNNNGC 3 cut(s) 215, 458, 1204
NcoI CCATGG 1 cut(s) 108
NdeII GATC 5 cut(s) 18, 198, 1081, 1246, 1291
NlaIII CATG 8 cut(s) 112, 452, 500, 820, 934, 970, 991, 1016
NmuCI GTSAC 1 cut(s) 1063
NsbI TGCGCA 1 cut(s) 453
NspI RCATGY 1 cut(s) 500
NspV TTCGAA 1 cut(s) 763
OliI CACNNNNGTG 1 cut(s) 299
PaqCI CACCTGC 1 cut(s) 404
PceI AGGCCT 1 cut(s) 398
PciSI GCTCTTC 1 cut(s) 1446
PdmI GAANNNNTTC 2 cut(s) 658, 1350
PfeI GAWTC 4 cut(s) 26, 86, 547, 553
PkrI GCNGC 2 cut(s) 52, 1318
PleI GAGTC 2 cut(s) 76, 850
PpsI GAGTC 2 cut(s) 76, 850
Psp6I CCWGG 2 cut(s) 127, 799
PspGI CCWGG 2 cut(s) 127, 799
PspPI GGNCC 3 cut(s) 125, 794, 1219
PsuI RGATCY 1 cut(s) 1246
RsaI GTAC 4 cut(s) 161, 176, 439, 1163
RsaNI GTAC 4 cut(s) 160, 175, 438, 1162
RseI CAYNNNNRTG 2 cut(s) 299, 889
SalI GTCGAC 1 cut(s) 236
SapI GCTCTTC 1 cut(s) 1446
SaqAI TTAA 7 cut(s) 401, 666, 699, 861, 1046, 1181, 1433
SatI GCNGC 2 cut(s) 51, 1317
Sau3AI GATC 5 cut(s) 18, 198, 1081, 1246, 1291
Sau96I GGNCC 3 cut(s) 125, 794, 1219
SchI GAGTC 2 cut(s) 77, 851
ScrFI CCNGG 2 cut(s) 129, 801
SexAI ACCWGGT 1 cut(s) 799
SfaNI GCATC 4 cut(s) 601, 1006, 1120, 1314
SfcI CTRYAG 2 cut(s) 462, 642
SfuI TTCGAA 1 cut(s) 763
SinI GGWCC 2 cut(s) 125, 794
SmiMI CAYNNNNRTG 2 cut(s) 299, 889
SmlI CTYRAG 4 cut(s) 400, 689, 1214, 1432
SmoI CTYRAG 4 cut(s) 400, 689, 1214, 1432
Sse9I AATT 6 cut(s) 97, 617, 960, 975, 1089, 1486
SseBI AGGCCT 1 cut(s) 398
SsiI CCGC 3 cut(s) 48, 51, 1133
SspI AATATT 1 cut(s) 568
SspMI CTAG 1 cut(s) 774
StuI AGGCCT 1 cut(s) 398
StyD4I CCNGG 2 cut(s) 127, 799
StyI CCWWGG 2 cut(s) 108, 204
TaaI ACNGT 5 cut(s) 323, 1053, 1360, 1417, 1464
TaiI ACGT 2 cut(s) 293, 425
TaqI TCGA 4 cut(s) 24, 180, 237, 763
TaqII GACCGA 3 cut(s) 28, 127, 782
TasI AATT 6 cut(s) 97, 617, 960, 975, 1089, 1486
TatI WGTACW 1 cut(s) 1161
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 4 cut(s) 26, 86, 547, 553
Tru1I TTAA 7 cut(s) 401, 666, 699, 861, 1046, 1181, 1433
Tru9I TTAA 7 cut(s) 401, 666, 699, 861, 1046, 1181, 1433
TscAI CASTG 4 cut(s) 328, 760, 885, 1469
TseFI GTSAC 1 cut(s) 1063
TseI GCWGC 1 cut(s) 1316
Tsp45I GTSAC 1 cut(s) 1063
TspDTI ATGAA 5 cut(s) 919, 955, 987, 1023, 1407
TspRI CASTG 4 cut(s) 328, 760, 885, 1469
Vha464I CTTAAG 2 cut(s) 400, 1432
VpaK11BI GGWCC 2 cut(s) 125, 794
XagI CCTNNNNNAGG 1 cut(s) 403
XapI RAATTY 1 cut(s) 97
XceI RCATGY 1 cut(s) 500
XmiI GTMKAC 1 cut(s) 237
XmnI GAANNNNTTC 2 cut(s) 658, 1350
XspI CTAG 1 cut(s) 774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.