Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1D

Orthogroup ID

OG0006183

Physical Location & Seq

Genomic Coordinates Reverse (-)

43780493 .. 43788007

Gene Structure 7515 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1DG227800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGAGTTTCCTCAAAGGCCTCATCGACTCTTTAGGCTCCGTCTTCTCCGAATCCTCCTCCTCCTCCTCCTCCTCCTCATACCCAAACCCTAGCAATCCCAATTCCTCCGCCATGGACGGCGTAGCTGGGCCCGGAGCTGCTTCGGTCACGAACGAGCGCGTGGCGTACAAGCTCAAGGGGTACTTTGATTTGGCCAAGGAAGAGATCGCCAAGGCTGTTAGGGCTGAAGAATGGGGCTTGGTTGAAGACGCCGTTGCACACTATAATAGCGCCCAGAGAATTCTAGCCGAAGCTAGCTCCACTCCAGTGCCTTCCTTTATCAGCGCCAGTGAGCGAGAGAAGGTGAAATCGTATCGTCAAAAGATATCAAAATGGCAGGGTCAAGTTTCTGATAGGTTACAAGTCTTAAGTAGACGTCCAGGTGGTACGTCCATAAGCAAGACCGTAGCTCCTGCACGAACTACTGCAGCTACATCAACAACGTTGAATTCACAAAATCATGTGATACCCAAGACTCTGCATCCCAGTAAAAGCATGCCAGCAACGAGGAGTCAGACCAATAATATTGTAAGATCAAAACCTGTGCAAGATTCTGGTGCAGGTTATGATGAAAAATTGGTTGAAATGATAAATAGTGCCATAGTGGATAGAAGTCCTTCTGTTAAATGGGAAGATGTTGCTGGTCTTGAGAAGGTGAAGAAAACTCTGATGGAGATGGTTATTTTACCGACTAAGAGAAGAGATTTGTTCACTGGCCTTCGAAGGCCAGCTCGAGGTCTGCTTCTGTTTGGTCCACCTGGTAATGGGAAAACCATGCTTGCTAAGGCAGTTGCTTCAGAATCAGAGGCAACCTTTTTTAATGTATCTGCATCTTCACTGACATCAAAATGGGTGGGAGAGGCTGAAAAGCTTGTGCGGACACTTTTCATGGTTGCTATATCCAGACAGCCATCTGTAATTTTCATGGATGAGATTGATAGTATCATGTCAACAAGGCAGGCAAACGAAAATGATGCAAGCAGAAGGTTGAAGTCAGAGTTTCTAATTCAGTTTGATGGAGTGACATCTAATCCTAATGATCTAGTAATTGTGATTGGTGCTACTAATAAGCCTCAAGAACTAGATGACGCAGTTCTTAGGAGATTGGTGAAGAGAGTATACATACCTTTACCAGATCTAACTGCTAGGAGACTTCTCCTAAGTCACAAACTCAAAGGCCAAGCATTTTCCTTACCAAGTGGAGATCTTGAACGACTTGCAAGAGACACTGAAGGTTATTCAGGAAGTGATCTACAAGCATTGTGTGAAGAAGCAGCAATGATGCCAATTAGGGAACTTGGTGAAAACATTCTCACCATCAAGGCAAATCAGGTAAGACCACTAAGAATTGAAGATTTTCAGAAGGCAATGACCGTAATCAGGCCAAGTTTAAGCAAAAGCAAGTGGGAAGAGCTTGAACAATGGAACGAGGAATTTGGGTCTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0001578 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0006810 GO:0006928 GO:0006996 GO:0006997 GO:0006998 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008017 GO:0008088 GO:0008089 GO:0008092 GO:0008150 GO:0008568 GO:0009987 GO:0010256 GO:0010458 GO:0010970 GO:0012505 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019896 GO:0022402 GO:0022411 GO:0022607 GO:0030496 GO:0030705 GO:0031090 GO:0031468 GO:0031965 GO:0031967 GO:0031975 GO:0034214 GO:0034643 GO:0042623 GO:0043014 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0046907 GO:0047497 GO:0048285 GO:0048487 GO:0051013 GO:0051179 GO:0051228 GO:0051230 GO:0051234 GO:0051259 GO:0051260 GO:0051301 GO:0051640 GO:0051641 GO:0051646 GO:0051649 GO:0051654 GO:0051656 GO:0061024 GO:0061640 GO:0065003 GO:0071840 GO:0072384 GO:0090148 GO:0098930 GO:0099111 GO:0140014 GO:0140096 GO:1902850 GO:1903008 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Vps4_C

Protein Analysis

495

Amino Acids

54.34

Weight (kDa)

9.27

Isoelectric Point (pI)

51.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	260 - 390	4.1e-39	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	415 - 449	8.8e-14	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45500 AT2G45500 AT2G45500 AT2G45500 AT2G45500
fragaria_vesca	FvH4_7g12180 FvH4_7g12180
malus_domestica	MD02G1200800.v1.1
prunus_persica	Prupe.2G148300_v2.0.a1 Prupe.2G148300_v2.0.a1 Prupe.2G148300_v2.0.a1
pyrus_communis	pycom02g16400
rosa_chinensis	RchiOBHm_Chr1g0350931
rosa_laevigata	RLG00000028440
rosa_multiflora	Rmu_sc0002665.1_g000019 Rmu_sc0006458.1_g000018
rosa_roxburghii	Rroxscaffold_4G00304290
rosa_rugosa	Rorug01G0075600 Rorug01G0215400 Rorug01G0215400 Rorug06G0023300
rosa_samantha	Rh1AG230100 Rh1BG075200 Rh1BG200000 Rh1CG214500 Rh1DG227800
rosa_wichuraiana	Rw1G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	418
Acc36I	ACCTGC	1 cut(s)	590
AccI	GTMKAC	2 cut(s)	412, 1158
AccII	CGCG	1 cut(s)	159
AciI	CCGC	2 cut(s)	108, 916
AclI	AACGTT	1 cut(s)	482
AcoI	YGGCCR	1 cut(s)	192
AcsI	RAATTY	3 cut(s)	279, 487, 1472
AcuI	CTGAAG	3 cut(s)	246, 819, 1290
AcyI	GRCGYC	2 cut(s)	249, 415
AfaI	GTAC	3 cut(s)	167, 182, 427
AfiI	CCNNNNNNNGG	3 cut(s)	773, 803, 1419
AflII	CTTAAG	1 cut(s)	406
AgsI	TTSAA	7 cut(s)	245, 487, 623, 1030, 1250, 1391, 1457
AjnI	CCWGG	2 cut(s)	418, 796
AleI	CACNNNNGTG	1 cut(s)	305
Alw26I	GTCTC	2 cut(s)	1183, 1257
Ama87I	CYCGRG	1 cut(s)	771
AoxI	GGCC	7 cut(s)	16, 128, 192, 754, 764, 1216, 1421
ApaI	GGGCCC	1 cut(s)	132
ApeKI	GCWGC	3 cut(s)	137, 467, 1313
ApoI	RAATTY	3 cut(s)	279, 487, 1472
Asp700I	GAANNNNTTC	3 cut(s)	655, 1347, 1395
AspLEI	GCGC	3 cut(s)	159, 272, 326
AspS9I	GGNCC	3 cut(s)	128, 129, 791
AsuC2I	CCSGG	1 cut(s)	132
AsuHPI	GGTGA	5 cut(s)	355, 706, 1159, 1345, 1352
AsuII	TTCGAA	1 cut(s)	760
AsuNHI	GCTAGC	1 cut(s)	293
AvaI	CYCGRG	1 cut(s)	771
AvaII	GGWCC	1 cut(s)	791
BaeGI	GKGCMC	1 cut(s)	132
BalI	TGGCCA	1 cut(s)	194
BanII	GRGCYC	1 cut(s)	132
BarI	GAAGNNNNNNTAC	2 cut(s)	1142, 1174
BbsI	GAAGAC	2 cut(s)	34, 252
BbvI	GCAGC	3 cut(s)	124, 479, 1325
BccI	CCATC	5 cut(s)	703, 709, 958, 1049, 1364
BceAI	ACGGC	2 cut(s)	133, 236
BcgI	CGANNNNNNTGC	2 cut(s)	995, 1029
BciT130I	CCWGG	2 cut(s)	420, 798
BcnI	CCSGG	1 cut(s)	132
BcoDI	GTCTC	2 cut(s)	1183, 1257
BfaI	CTAG	6 cut(s)	90, 284, 294, 1082, 1121, 1185
BfmI	CTRYAG	1 cut(s)	465
BfoI	RGCGCY	2 cut(s)	273, 327
BfrI	CTTAAG	1 cut(s)	406
BfuAI	ACCTGC	1 cut(s)	590
BglII	AGATCT	2 cut(s)	1174, 1243
BisI	GCNGC	3 cut(s)	138, 468, 1314
BlsI	GCNGC	3 cut(s)	139, 469, 1315
Bme1390I	CCNGG	3 cut(s)	132, 420, 798
Bme18I	GGWCC	1 cut(s)	791
BmeT110I	CYCGRG	1 cut(s)	771
BmgT120I	GGNCC	3 cut(s)	128, 129, 791
BmiI	GGNNCC	2 cut(s)	37, 130
BmrFI	CCNGG	3 cut(s)	132, 420, 798
BmrI	ACTGGG	1 cut(s)	519
BmsI	GCATC	4 cut(s)	529, 878, 1003, 1311
BmtI	GCTAGC	1 cut(s)	297
BmuI	ACTGGG	1 cut(s)	519
BpiI	GAAGAC	2 cut(s)	34, 252
BpmI	CTGGAG	1 cut(s)	288
Bpu10I	CCTNAGC	1 cut(s)	822
Bpu14I	TTCGAA	1 cut(s)	760
BpuEI	CTTGAG	3 cut(s)	158, 707, 1098
BpuMI	CCSGG	1 cut(s)	132
BsaHI	GRCGYC	2 cut(s)	249, 415
BsaJI	CCNNGG	3 cut(s)	111, 195, 210
BsaXI	ACNNNNNCTCC	2 cut(s)	433, 463
Bsc4I	CCNNNNNNNGG	3 cut(s)	773, 803, 1419
Bse1I	ACTGG	4 cut(s)	305, 327, 525, 757
Bse3DI	GCAATG	2 cut(s)	1323, 1413
BseBI	CCWGG	2 cut(s)	420, 798
BseDI	CCNNGG	3 cut(s)	111, 195, 210
BseGI	GGATG	2 cut(s)	520, 973
BseLI	CCNNNNNNNGG	3 cut(s)	773, 803, 1419
BseMI	GCAATG	2 cut(s)	1323, 1413
BseNI	ACTGG	4 cut(s)	305, 327, 525, 757
BseRI	GAGGAG	8 cut(s)	46, 49, 52, 55, 58, 61, 64, 562
BseSI	GKGCMC	1 cut(s)	132
BseXI	GCAGC	3 cut(s)	124, 479, 1325
BseYI	CCCAGC	1 cut(s)	125
BsgI	GTGCAG	2 cut(s)	438, 618
Bsh1236I	CGCG	1 cut(s)	159
BshFI	GGCC	7 cut(s)	18, 130, 194, 756, 766, 1218, 1423
BsiHKCI	CYCGRG	1 cut(s)	771
BsiSI	CCGG	1 cut(s)	132
BslI	CCNNNNNNNGG	3 cut(s)	773, 803, 1419
BsmAI	GTCTC	2 cut(s)	1183, 1257
BsnI	GGCC	7 cut(s)	18, 130, 194, 756, 766, 1218, 1423
BsoBI	CYCGRG	1 cut(s)	771
Bsp119I	TTCGAA	1 cut(s)	760
Bsp120I	GGGCCC	1 cut(s)	128
Bsp1286I	GDGCHC	1 cut(s)	132
Bsp143I	GATC	6 cut(s)	204, 572, 1078, 1174, 1243, 1288
Bsp19I	CCATGG	1 cut(s)	111
BspACI	CCGC	2 cut(s)	108, 916
BspANI	GGCC	7 cut(s)	18, 130, 194, 756, 766, 1218, 1423
BspFNI	CGCG	1 cut(s)	159
BspLI	GGNNCC	2 cut(s)	37, 130
BspMAI	CTGCAG	1 cut(s)	469
BspMI	ACCTGC	1 cut(s)	590
BspOI	GCTAGC	1 cut(s)	297
BspQI	GCTCTTC	1 cut(s)	1443
BspT104I	TTCGAA	1 cut(s)	760
BspTI	CTTAAG	1 cut(s)	406
BsrDI	GCAATG	2 cut(s)	1323, 1413
BsrI	ACTGG	4 cut(s)	305, 327, 525, 757
BssECI	CCNNGG	3 cut(s)	111, 195, 210
BssMI	GATC	6 cut(s)	204, 572, 1078, 1174, 1243, 1288
BssNAI	GTATAC	1 cut(s)	1159
BssNI	GRCGYC	2 cut(s)	249, 415
BssT1I	CCWWGG	3 cut(s)	111, 195, 210
Bst1107I	GTATAC	1 cut(s)	1159
Bst2UI	CCWGG	2 cut(s)	420, 798
Bst4CI	ACNGT	2 cut(s)	445, 1414
Bst6I	CTCTTC	4 cut(s)	195, 733, 1145, 1443
BstACI	GRCGYC	2 cut(s)	249, 415
BstAFI	CTTAAG	1 cut(s)	406
BstBI	TTCGAA	1 cut(s)	760
BstC8I	GCNNGC	7 cut(s)	295, 536, 540, 768, 819, 999, 1018
BstDEI	CTNAG	5 cut(s)	732, 822, 1136, 1199, 1382
BstDSI	CCRYGG	1 cut(s)	111
BstF5I	GGATG	2 cut(s)	520, 973
BstFNI	CGCG	1 cut(s)	159
BstH2I	RGCGCY	2 cut(s)	273, 327
BstHHI	GCGC	3 cut(s)	159, 272, 326
BstKTI	GATC	6 cut(s)	207, 575, 1081, 1177, 1246, 1291
BstMAI	GTCTC	2 cut(s)	1183, 1257
BstMBI	GATC	6 cut(s)	204, 572, 1078, 1174, 1243, 1288
BstMWI	GCNNNNNNNGC	1 cut(s)	221
BstNI	CCWGG	2 cut(s)	420, 798
BstNSI	RCATGY	1 cut(s)	538
BstSCI	CCNGG	3 cut(s)	130, 418, 796
BstSFI	CTRYAG	1 cut(s)	465
BstSLI	GKGCMC	1 cut(s)	132
BstUI	CGCG	1 cut(s)	159
BstV1I	GCAGC	3 cut(s)	124, 479, 1325
BstV2I	GAAGAC	2 cut(s)	34, 252
BstX2I	RGATCY	2 cut(s)	1174, 1243
BstYI	RGATCY	2 cut(s)	1174, 1243
BstZ17I	GTATAC	1 cut(s)	1159
BsuRI	GGCC	7 cut(s)	18, 130, 194, 756, 766, 1218, 1423
BtgI	CCRYGG	1 cut(s)	111
BtsCI	GGATG	2 cut(s)	520, 973
BtsIMutI	CAGTG	5 cut(s)	312, 334, 750, 875, 1266
BveI	ACCTGC	1 cut(s)	590
Cac8I	GCNNGC	7 cut(s)	295, 536, 540, 768, 819, 999, 1018
CfoI	GCGC	3 cut(s)	159, 272, 326
Cfr13I	GGNCC	3 cut(s)	128, 129, 791
CseI	GACGC	2 cut(s)	257, 1136
CsiI	ACCWGGT	1 cut(s)	796
Csp6I	GTAC	3 cut(s)	166, 181, 426
CspCI	CAANNNNNGTGG	2 cut(s)	873, 908
CviAII	CATG	7 cut(s)	112, 500, 535, 814, 928, 964, 985
CviQI	GTAC	3 cut(s)	166, 181, 426
DdeI	CTNAG	5 cut(s)	732, 822, 1136, 1199, 1382
DpnI	GATC	6 cut(s)	206, 574, 1080, 1176, 1245, 1290
DpnII	GATC	6 cut(s)	204, 572, 1078, 1174, 1243, 1288
EaeI	YGGCCR	1 cut(s)	192
Eam1104I	CTCTTC	4 cut(s)	195, 733, 1145, 1443
EarI	CTCTTC	4 cut(s)	195, 733, 1145, 1443
EciI	GGCGGA	1 cut(s)	97
Eco130I	CCWWGG	3 cut(s)	111, 195, 210
Eco147I	AGGCCT	1 cut(s)	18
Eco24I	GRGCYC	1 cut(s)	132
Eco32I	GATATC	1 cut(s)	366
Eco47I	GGWCC	1 cut(s)	791
Eco57I	CTGAAG	3 cut(s)	246, 819, 1290
Eco88I	CYCGRG	1 cut(s)	771
EcoRI	GAATTC	2 cut(s)	279, 487
EcoRII	CCWGG	2 cut(s)	418, 796
EcoRV	GATATC	1 cut(s)	366
EcoT14I	CCWWGG	3 cut(s)	111, 195, 210
EcoT38I	GRGCYC	1 cut(s)	132
ErhI	CCWWGG	3 cut(s)	111, 195, 210
FaeI	CATG	7 cut(s)	115, 503, 538, 817, 931, 967, 988
FalI	AAGNNNNNCTT	2 cut(s)	167, 199
FatI	CATG	7 cut(s)	111, 499, 534, 813, 927, 963, 984
FblI	GTMKAC	2 cut(s)	412, 1158
Fnu4HI	GCNGC	3 cut(s)	138, 468, 1314
FokI	GGATG	2 cut(s)	507, 980
FriOI	GRGCYC	1 cut(s)	132
Fsp4HI	GCNGC	3 cut(s)	138, 468, 1314
FspBI	CTAG	6 cut(s)	90, 284, 294, 1082, 1121, 1185
GlaI	GCGC	3 cut(s)	158, 271, 325
GluI	GCNGC	3 cut(s)	138, 468, 1314
GsaI	CCCAGC	1 cut(s)	129
GsuI	CTGGAG	1 cut(s)	288
HaeII	RGCGCY	2 cut(s)	273, 327
HaeIII	GGCC	7 cut(s)	18, 130, 194, 756, 766, 1218, 1423
HapII	CCGG	1 cut(s)	132
HgaI	GACGC	2 cut(s)	257, 1136
HhaI	GCGC	3 cut(s)	159, 272, 326
Hin1I	GRCGYC	2 cut(s)	249, 415
Hin1II	CATG	7 cut(s)	115, 503, 538, 817, 931, 967, 988
Hin6I	GCGC	3 cut(s)	157, 270, 324
HinP1I	GCGC	3 cut(s)	157, 270, 324
HincII	GTYRAC	1 cut(s)	990
HindII	GTYRAC	1 cut(s)	990
HindIII	AAGCTT	1 cut(s)	908
HinfI	GANTC	6 cut(s)	26, 50, 514, 550, 590, 839
HpaII	CCGG	1 cut(s)	132
HphI	GGTGA	5 cut(s)	355, 706, 1159, 1345, 1352
Hpy166II	GTNNAC	5 cut(s)	413, 750, 794, 990, 1159
Hpy188I	TCNGA	8 cut(s)	49, 391, 555, 708, 838, 844, 1036, 1401
Hpy188III	TCNNGA	6 cut(s)	148, 686, 942, 1115, 1247, 1281
Hpy8I	GTNNAC	5 cut(s)	413, 750, 794, 990, 1159
HpyAV	CCTTC	9 cut(s)	321, 334, 666, 685, 756, 767, 1017, 1265, 1396
HpyCH4III	ACNGT	2 cut(s)	445, 1414
HpyCH4IV	ACGT	3 cut(s)	415, 428, 482
HpyCH4V	TGCA	9 cut(s)	257, 455, 467, 520, 586, 599, 869, 1016, 1259
HpyF10VI	GCNNNNNNNGC	1 cut(s)	221
HpyF3I	CTNAG	5 cut(s)	732, 822, 1136, 1199, 1382
HpySE526I	ACGT	3 cut(s)	415, 428, 482
Hsp92I	GRCGYC	2 cut(s)	249, 415
Hsp92II	CATG	7 cut(s)	115, 503, 538, 817, 931, 967, 988
HspAI	GCGC	3 cut(s)	157, 270, 324
Kzo9I	GATC	6 cut(s)	204, 572, 1078, 1174, 1243, 1288
LguI	GCTCTTC	1 cut(s)	1443
LmnI	GCTCC	4 cut(s)	41, 134, 302, 454
Lsp1109I	GCAGC	3 cut(s)	124, 479, 1325
LweI	GCATC	4 cut(s)	529, 878, 1003, 1311
MabI	ACCWGGT	1 cut(s)	796
MaeI	CTAG	6 cut(s)	90, 284, 294, 1082, 1121, 1185
MaeII	ACGT	3 cut(s)	415, 428, 482
MaeIII	GTNAC	4 cut(s)	145, 396, 1060, 1202
MalI	GATC	6 cut(s)	206, 574, 1080, 1176, 1245, 1290
MboI	GATC	6 cut(s)	204, 572, 1078, 1174, 1243, 1288
MflI	RGATCY	2 cut(s)	1174, 1243
MhlI	GDGCHC	1 cut(s)	132
MlsI	TGGCCA	1 cut(s)	194
MluNI	TGGCCA	1 cut(s)	194
MlyI	GAGTC	3 cut(s)	20, 508, 559
Mox20I	TGGCCA	1 cut(s)	194
MroXI	GAANNNNTTC	3 cut(s)	655, 1347, 1395
MscI	TGGCCA	1 cut(s)	194
MseI	TTAA	4 cut(s)	407, 663, 858, 1430
MslI	CAYNNNNRTG	2 cut(s)	305, 886
Msp20I	TGGCCA	1 cut(s)	194
MspCI	CTTAAG	1 cut(s)	406
MspI	CCGG	1 cut(s)	132
MspR9I	CCNGG	3 cut(s)	132, 420, 798
MvaI	CCWGG	2 cut(s)	420, 798
MvnI	CGCG	1 cut(s)	159
MwoI	GCNNNNNNNGC	1 cut(s)	221
NciI	CCSGG	1 cut(s)	132
NcoI	CCATGG	1 cut(s)	111
NdeII	GATC	6 cut(s)	204, 572, 1078, 1174, 1243, 1288
NheI	GCTAGC	1 cut(s)	293
NlaIII	CATG	7 cut(s)	115, 503, 538, 817, 931, 967, 988
NlaIV	GGNNCC	2 cut(s)	37, 130
NmuCI	GTSAC	3 cut(s)	145, 1060, 1202
NspI	RCATGY	1 cut(s)	538
NspV	TTCGAA	1 cut(s)	760
OliI	CACNNNNGTG	1 cut(s)	305
PaeI	GCATGC	1 cut(s)	538
PaeR7I	CTCGAG	1 cut(s)	771
PceI	AGGCCT	1 cut(s)	18
PciSI	GCTCTTC	1 cut(s)	1443
PdmI	GAANNNNTTC	3 cut(s)	655, 1347, 1395
PfeI	GAWTC	3 cut(s)	50, 590, 839
PkrI	GCNGC	3 cut(s)	139, 469, 1315
PleI	GAGTC	3 cut(s)	20, 508, 558
PpsI	GAGTC	3 cut(s)	20, 508, 558
Psp1406I	AACGTT	1 cut(s)	482
Psp6I	CCWGG	2 cut(s)	418, 796
PspFI	CCCAGC	1 cut(s)	125
PspGI	CCWGG	2 cut(s)	418, 796
PspN4I	GGNNCC	2 cut(s)	37, 130
PspOMI	GGGCCC	1 cut(s)	128
PspPI	GGNCC	3 cut(s)	128, 129, 791
PspXI	VCTCGAGB	1 cut(s)	771
PstI	CTGCAG	1 cut(s)	469
PsuI	RGATCY	2 cut(s)	1174, 1243
RsaI	GTAC	3 cut(s)	167, 182, 427
RsaNI	GTAC	3 cut(s)	166, 181, 426
RseI	CAYNNNNRTG	2 cut(s)	305, 886
SapI	GCTCTTC	1 cut(s)	1443
SaqAI	TTAA	4 cut(s)	407, 663, 858, 1430
SatI	GCNGC	3 cut(s)	138, 468, 1314
Sau3AI	GATC	6 cut(s)	204, 572, 1078, 1174, 1243, 1288
Sau96I	GGNCC	3 cut(s)	128, 129, 791
SchI	GAGTC	3 cut(s)	20, 508, 559
ScrFI	CCNGG	3 cut(s)	132, 420, 798
SduI	GDGCHC	1 cut(s)	132
SexAI	ACCWGGT	1 cut(s)	796
SfaNI	GCATC	4 cut(s)	529, 878, 1003, 1311
SfcI	CTRYAG	1 cut(s)	465
Sfr274I	CTCGAG	1 cut(s)	771
SfuI	TTCGAA	1 cut(s)	760
SinI	GGWCC	1 cut(s)	791
SlaI	CTCGAG	1 cut(s)	771
SmiMI	CAYNNNNRTG	2 cut(s)	305, 886
SmlI	CTYRAG	5 cut(s)	173, 406, 686, 771, 1113
SmoI	CTYRAG	5 cut(s)	173, 406, 686, 771, 1113
SphI	GCATGC	1 cut(s)	538
SseBI	AGGCCT	1 cut(s)	18
SsiI	CCGC	2 cut(s)	108, 916
SspI	AATATT	1 cut(s)	565
SspMI	CTAG	6 cut(s)	90, 284, 294, 1082, 1121, 1185
StuI	AGGCCT	1 cut(s)	18
StyD4I	CCNGG	3 cut(s)	130, 418, 796
StyI	CCWWGG	3 cut(s)	111, 195, 210
TaaI	ACNGT	2 cut(s)	445, 1414
TaiI	ACGT	3 cut(s)	418, 431, 485
TaqI	TCGA	3 cut(s)	24, 760, 772
TaqII	GACCGA	1 cut(s)	133
TfiI	GAWTC	3 cut(s)	50, 590, 839
Tru1I	TTAA	4 cut(s)	407, 663, 858, 1430
Tru9I	TTAA	4 cut(s)	407, 663, 858, 1430
TscAI	CASTG	5 cut(s)	312, 334, 757, 882, 1273
TseFI	GTSAC	3 cut(s)	145, 1060, 1202
TseI	GCWGC	3 cut(s)	137, 467, 1313
Tsp45I	GTSAC	3 cut(s)	145, 1060, 1202
TspDTI	ATGAA	3 cut(s)	624, 916, 952
TspGWI	ACGGA	1 cut(s)	28
TspRI	CASTG	5 cut(s)	312, 334, 757, 882, 1273
Vha464I	CTTAAG	1 cut(s)	406
VpaK11BI	GGWCC	1 cut(s)	791
XapI	RAATTY	3 cut(s)	279, 487, 1472
XceI	RCATGY	1 cut(s)	538
XhoI	CTCGAG	1 cut(s)	771
XmiI	GTMKAC	2 cut(s)	412, 1158
XmnI	GAANNNNTTC	3 cut(s)	655, 1347, 1395
XspI	CTAG	6 cut(s)	90, 284, 294, 1082, 1121, 1185
ZraI	GACGTC	1 cut(s)	416

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.