pycom02g16400

Belongs to the AAA ATPase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
13535498 .. 13540603
5106 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g16400.2

Sequence Viewer

Length: 1479 bp
ATGAACTTCCTCAAAGGACTCATCGATTCTTTCGGCTCCGTCTTCTCCGCCGCCTCCTCCGACGAGTCTCACCCAAACTCCAGTCCTCCGCCCGATTCCTCCACCATGGACGGCGTAGCTGGCCCATCTTCCGTCTCCAACGAGCGTGTCGCATACAAGCTCAAGGGCTATTTCGAATTGGCGAAGGATGAGATCGCCAAGGCCGTTAGGGCTGAAGAGTGGGGCTTAGTCGATGACGCCATTGCTCACTACAGCAACGCCCAGAGGGTTCTTGTCGAGGCCACCTCCACTCCCGTGCCTTCCTATATCACCCTCAGTGAGAAAGAGAAGGTGAAATCTTATCGTCAGAAAATATCGAAGTGGCAGGGTCAAGTTTCTGAAAGATTACAAACTTTAGGCAGACGAACAGGTGGTGCACCCATAAGCAAAAACACCATAGCTCATGCACAAACTGCTTCAGTTGCATCAACAACATCAACTGCCAGAAAACATGTGTTACCCCAGTCTCCACGTGCCACTACAAACAGACCAGAAATGAGGAATGAGGCCAATAACATTGTAAGCTCAAAACCTGTGCAACAGTCTGGTGGTGGTTATGATGAAAAATTGGTTGAAATGATAAATAGTGCTATAGTGGATAGAAGCCCTTCCGTTAAATGGGAAGATGTTGCTGGTCTTGAGAAGGTGAAACAAACTTTGATGGAGATGATTATTTTACCCACAAAAAGAAGAGACTTGTTCACTGGTCTTCGAAGGCCAGCTAGAGGTTTGCTTTTGTTTGGTCCGCCTGGAAATGGAAAAACCATGCTTGCAAAGGCAGTTGCTTCAGAGTCAGAGGCAACATTTTTTAATGTCTCTGCATCTTCACTGACTTCAAAATGGGTGGGAGAGGCTGAAAAGCTTGTACGAACTCTCTTCATGGTTGCTATATCCAGACAGCCATCAGTAATTTTCATGGATGAAATTGATAGTGTCATGTCAACAAGGCAGGCAAACGAAAATGACGCAAGCAGAAGGTTGAAGTCAGAGTTTCTGATACAGTTTGATGGAGTGACCTCTAATCCTAATGATCTGGTAATTGTGATCGGTGCTACGAATAAGCCTCAAGAACTGGATGATGCAGTTCTTAGAAGACTGGTAAAGAGAGTGTACATACCATTACCAGATTTAACTGCGAGGAGAGTTCTCCTAAGGCACAAACTCAAGGGCCAAGCATTTTCCTTACCAAGTGGGGATGTTGAAAGACTTGCAAGAGAGACAGAAGGGTATTCGGGAAGTGATCTACAAGCATTGTGTGAAGAAGCTGCAATGATGCCAATTAGGGAACTGGGTGAAAATATTCTCACCATCAGGGCAAATCAGGTACGACCGCTAAGATATGAAGATTTTCAGAAGGCGATGACTGTAATCAGGCCAAGCTTAAGCAAAAGCAAGTGGGAAGAGCTTGAGAGGTGGAACGAAGAGTTCGGCTCTAATTGA

Protein Analysis

493

Amino Acids

54.42

Weight (kDa)

9.11

Isoelectric Point (pI)

49.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 5 cut(s) 48, 51, 89, 785, 1370
AcuI CTGAAG 3 cut(s) 234, 441, 810
AcvI CACGTG 1 cut(s) 512
AcyI GRCGYC 1 cut(s) 237
AfaI GTAC 3 cut(s) 906, 1151, 1365
AfiI CCNNNNNNNGG 3 cut(s) 657, 764, 794
AflII CTTAAG 1 cut(s) 1420
AflIII ACRYGT 1 cut(s) 490
AgsI TTSAA 4 cut(s) 614, 876, 1021, 1241
AjnI CCWGG 1 cut(s) 787
AleI CACNNNNGTG 1 cut(s) 293
AluBI AGCT 9 cut(s) 119, 160, 440, 564, 761, 901, 1304, 1419, 1444
AluI AGCT 9 cut(s) 119, 160, 440, 564, 761, 901, 1304, 1419, 1444
Alw21I GWGCWC 1 cut(s) 418
Alw26I GTCTC 6 cut(s) 72, 139, 510, 726, 859, 1250
Alw44I GTGCAC 1 cut(s) 414
AoxI GGCC 7 cut(s) 121, 201, 279, 546, 755, 1207, 1412
ApaLI GTGCAC 1 cut(s) 414
ApeKI GCWGC 1 cut(s) 1304
Asp700I GAANNNNTTC 3 cut(s) 646, 1338, 1386
AspS9I GGNCC 3 cut(s) 122, 782, 1207
AsuHPI GGTGA 6 cut(s) 62, 301, 343, 697, 1336, 1343
AsuII TTCGAA 2 cut(s) 174, 751
AvaII GGWCC 1 cut(s) 782
AxyI CCTNAGG 1 cut(s) 1190
BaeGI GKGCMC 1 cut(s) 418
BbrPI CACGTG 1 cut(s) 512
BbsI GAAGAC 3 cut(s) 34, 740, 1138
Bbv12I GWGCWC 1 cut(s) 418
BbvI GCAGC 1 cut(s) 1291
BccI CCATC 5 cut(s) 133, 694, 949, 1040, 1355
BceAI ACGGC 2 cut(s) 127, 188
BciT130I CCWGG 1 cut(s) 789
BcoDI GTCTC 6 cut(s) 72, 139, 510, 726, 859, 1250
BfaI CTAG 1 cut(s) 762
BfmI CTRYAG 2 cut(s) 250, 630
BfrI CTTAAG 1 cut(s) 1420
BglI GCCNNNNNGGC 1 cut(s) 209
BisI GCNGC 2 cut(s) 51, 1305
BlsI GCNGC 2 cut(s) 52, 1306
Bme1390I CCNGG 1 cut(s) 789
Bme18I GGWCC 1 cut(s) 782
BmgT120I GGNCC 3 cut(s) 122, 782, 1207
BmiI GGNNCC 1 cut(s) 37
BmrFI CCNGG 1 cut(s) 789
BmrI ACTGGG 2 cut(s) 496, 1337
BmsI GCATC 4 cut(s) 473, 869, 1108, 1302
BmuI ACTGGG 2 cut(s) 496, 1337
BpiI GAAGAC 3 cut(s) 34, 740, 1138
BplI GAGNNNNNCTC 3 cut(s) 269, 301, 1454
BpmI CTGGAG 1 cut(s) 64
Bpu14I TTCGAA 2 cut(s) 174, 751
BpuEI CTTGAG 5 cut(s) 146, 698, 1089, 1187, 1466
Bsa29I ATCGAT 1 cut(s) 24
BsaAI YACGTR 1 cut(s) 512
BsaHI GRCGYC 1 cut(s) 237
BsaJI CCNNGG 2 cut(s) 105, 198
BsaXI ACNNNNNCTCC 4 cut(s) 62, 92, 274, 304
Bsc4I CCNNNNNNNGG 3 cut(s) 657, 764, 794
Bse1I ACTGG 6 cut(s) 81, 502, 748, 1116, 1140, 1332
Bse21I CCTNAGG 1 cut(s) 1190
Bse3DI GCAATG 2 cut(s) 240, 1314
BseBI CCWGG 1 cut(s) 789
BseCI ATCGAT 1 cut(s) 24
BseDI CCNNGG 2 cut(s) 105, 198
BseGI GGATG 4 cut(s) 193, 964, 1120, 1240
BseLI CCNNNNNNNGG 3 cut(s) 657, 764, 794
BseMI GCAATG 2 cut(s) 240, 1314
BseMII CTCAG 1 cut(s) 328
BseNI ACTGG 6 cut(s) 81, 502, 748, 1116, 1140, 1332
BseRI GAGGAG 2 cut(s) 46, 1192
BseSI GKGCMC 1 cut(s) 418
BseXI GCAGC 1 cut(s) 1291
Bsh1285I CGRYCG 1 cut(s) 1370
BshFI GGCC 7 cut(s) 123, 203, 281, 548, 757, 1209, 1414
BshVI ATCGAT 1 cut(s) 24
BsiEI CGRYCG 1 cut(s) 1370
BsiHKAI GWGCWC 1 cut(s) 418
BslI CCNNNNNNNGG 3 cut(s) 657, 764, 794
BsmAI GTCTC 6 cut(s) 72, 139, 510, 726, 859, 1250
BsmBI CGTCTC 1 cut(s) 139
BsnI GGCC 7 cut(s) 123, 203, 281, 548, 757, 1209, 1414
Bsp119I TTCGAA 2 cut(s) 174, 751
Bsp1286I GDGCHC 1 cut(s) 418
Bsp1407I TGTACA 1 cut(s) 1149
Bsp143I GATC 4 cut(s) 192, 1069, 1083, 1279
Bsp19I CCATGG 1 cut(s) 105
BspACI CCGC 5 cut(s) 48, 51, 89, 785, 1370
BspANI GGCC 7 cut(s) 123, 203, 281, 548, 757, 1209, 1414
BspCNI CTCAG 1 cut(s) 327
BspDI ATCGAT 1 cut(s) 24
BspLI GGNNCC 1 cut(s) 37
BspQI GCTCTTC 1 cut(s) 1434
BspT104I TTCGAA 2 cut(s) 174, 751
BspTI CTTAAG 1 cut(s) 1420
BsrDI GCAATG 2 cut(s) 240, 1314
BsrGI TGTACA 1 cut(s) 1149
BsrI ACTGG 6 cut(s) 81, 502, 748, 1116, 1140, 1332
BssECI CCNNGG 2 cut(s) 105, 198
BssMI GATC 4 cut(s) 192, 1069, 1083, 1279
BssNI GRCGYC 1 cut(s) 237
BssT1I CCWWGG 2 cut(s) 105, 198
Bst2UI CCWGG 1 cut(s) 789
Bst4CI ACNGT 3 cut(s) 582, 1041, 1405
Bst6I CTCTTC 5 cut(s) 210, 724, 920, 1434, 1455
BstACI GRCGYC 1 cut(s) 237
BstAFI CTTAAG 1 cut(s) 1420
BstAPI GCANNNNNTGC 1 cut(s) 452
BstAUI TGTACA 1 cut(s) 1149
BstBAI YACGTR 1 cut(s) 512
BstBI TTCGAA 2 cut(s) 174, 751
BstC8I GCNNGC 5 cut(s) 121, 759, 810, 990, 1009
BstDEI CTNAG 5 cut(s) 226, 314, 1127, 1190, 1373
BstDSI CCRYGG 1 cut(s) 105
BstF5I GGATG 4 cut(s) 193, 964, 1120, 1240
BstKTI GATC 4 cut(s) 195, 1072, 1086, 1282
BstMAI GTCTC 6 cut(s) 72, 139, 510, 726, 859, 1250
BstMBI GATC 4 cut(s) 192, 1069, 1083, 1279
BstMCI CGRYCG 1 cut(s) 1370
BstMWI GCNNNNNNNGC 4 cut(s) 120, 209, 452, 461
BstNI CCWGG 1 cut(s) 789
BstNSI RCATGY 1 cut(s) 494
BstSCI CCNGG 1 cut(s) 787
BstSFI CTRYAG 2 cut(s) 250, 630
BstSLI GKGCMC 1 cut(s) 418
BstV1I GCAGC 1 cut(s) 1291
BstV2I GAAGAC 3 cut(s) 34, 740, 1138
Bsu15I ATCGAT 1 cut(s) 24
Bsu36I CCTNAGG 1 cut(s) 1190
BsuRI GGCC 7 cut(s) 123, 203, 281, 548, 757, 1209, 1414
BsuTUI ATCGAT 1 cut(s) 24
BtgI CCRYGG 1 cut(s) 105
BtgZI GCGATG 1 cut(s) 1412
BtsCI GGATG 4 cut(s) 193, 964, 1120, 1240
BtsIMutI CAGTG 3 cut(s) 322, 741, 866
Cac8I GCNNGC 5 cut(s) 121, 759, 810, 990, 1009
Cfr13I GGNCC 3 cut(s) 122, 782, 1207
ClaI ATCGAT 1 cut(s) 24
CseI GACGC 2 cut(s) 245, 1013
Csp6I GTAC 3 cut(s) 905, 1150, 1364
CspCI CAANNNNNGTGG 2 cut(s) 864, 899
CviAII CATG 7 cut(s) 106, 443, 491, 805, 919, 955, 976
CviQI GTAC 3 cut(s) 905, 1150, 1364
DdeI CTNAG 5 cut(s) 226, 314, 1127, 1190, 1373
DpnI GATC 4 cut(s) 194, 1071, 1085, 1281
DpnII GATC 4 cut(s) 192, 1069, 1083, 1279
Eam1104I CTCTTC 5 cut(s) 210, 724, 920, 1434, 1455
EarI CTCTTC 5 cut(s) 210, 724, 920, 1434, 1455
EciI GGCGGA 3 cut(s) 37, 78, 774
Eco130I CCWWGG 2 cut(s) 105, 198
Eco47I GGWCC 1 cut(s) 782
Eco57I CTGAAG 3 cut(s) 234, 441, 810
Eco72I CACGTG 1 cut(s) 512
Eco81I CCTNAGG 1 cut(s) 1190
EcoRII CCWGG 1 cut(s) 787
EcoT14I CCWWGG 2 cut(s) 105, 198
ErhI CCWWGG 2 cut(s) 105, 198
Esp3I CGTCTC 1 cut(s) 139
FaeI CATG 7 cut(s) 109, 446, 494, 808, 922, 958, 979
FatI CATG 7 cut(s) 105, 442, 490, 804, 918, 954, 975
Fnu4HI GCNGC 2 cut(s) 51, 1305
FokI GGATG 4 cut(s) 200, 971, 1127, 1247
Fsp4HI GCNGC 2 cut(s) 51, 1305
FspBI CTAG 1 cut(s) 762
GluI GCNGC 2 cut(s) 51, 1305
GsuI CTGGAG 1 cut(s) 64
HaeIII GGCC 7 cut(s) 123, 203, 281, 548, 757, 1209, 1414
HgaI GACGC 2 cut(s) 245, 1013
Hin1I GRCGYC 1 cut(s) 237
Hin1II CATG 7 cut(s) 109, 446, 494, 808, 922, 958, 979
HincII GTYRAC 1 cut(s) 981
HindII GTYRAC 1 cut(s) 981
HindIII AAGCTT 2 cut(s) 899, 1417
HinfI GANTC 5 cut(s) 18, 26, 65, 95, 830
HphI GGTGA 6 cut(s) 62, 301, 343, 697, 1336, 1343
Hpy166II GTNNAC 4 cut(s) 416, 741, 981, 1150
Hpy188I TCNGA 8 cut(s) 61, 348, 379, 829, 835, 1027, 1035, 1392
Hpy188III TCNNGA 4 cut(s) 677, 933, 1106, 1272
Hpy8I GTNNAC 4 cut(s) 416, 741, 981, 1150
Hpy99I CGWCG 1 cut(s) 65
HpyAV CCTTC 9 cut(s) 178, 309, 322, 657, 676, 747, 1008, 1256, 1387
HpyCH4III ACNGT 3 cut(s) 582, 1041, 1405
HpyCH4IV ACGT 1 cut(s) 511
HpyCH4V TGCA 9 cut(s) 416, 446, 464, 577, 812, 860, 1121, 1250, 1307
HpyF10VI GCNNNNNNNGC 4 cut(s) 120, 209, 452, 461
HpyF3I CTNAG 5 cut(s) 226, 314, 1127, 1190, 1373
HpySE526I ACGT 1 cut(s) 511
Hsp92I GRCGYC 1 cut(s) 237
Hsp92II CATG 7 cut(s) 109, 446, 494, 808, 922, 958, 979
Kzo9I GATC 4 cut(s) 192, 1069, 1083, 1279
LguI GCTCTTC 1 cut(s) 1434
LmnI GCTCC 1 cut(s) 41
Lsp1109I GCAGC 1 cut(s) 1291
LweI GCATC 4 cut(s) 473, 869, 1108, 1302
MaeI CTAG 1 cut(s) 762
MaeII ACGT 1 cut(s) 511
MaeIII GTNAC 2 cut(s) 495, 1051
MalI GATC 4 cut(s) 194, 1071, 1085, 1281
MboI GATC 4 cut(s) 192, 1069, 1083, 1279
MhlI GDGCHC 1 cut(s) 418
MluCI AATT 7 cut(s) 176, 605, 948, 963, 1077, 1317, 1474
MlyI GAGTC 3 cut(s) 12, 74, 839
MmeI TCCRAC 2 cut(s) 84, 162
MroXI GAANNNNTTC 3 cut(s) 646, 1338, 1386
MseI TTAA 4 cut(s) 654, 849, 1169, 1421
MslI CAYNNNNRTG 1 cut(s) 293
MspCI CTTAAG 1 cut(s) 1420
MspR9I CCNGG 1 cut(s) 789
MvaI CCWGG 1 cut(s) 789
MwoI GCNNNNNNNGC 4 cut(s) 120, 209, 452, 461
NcoI CCATGG 1 cut(s) 105
NdeII GATC 4 cut(s) 192, 1069, 1083, 1279
NlaIII CATG 7 cut(s) 109, 446, 494, 808, 922, 958, 979
NlaIV GGNNCC 1 cut(s) 37
NmuCI GTSAC 1 cut(s) 1051
NspI RCATGY 1 cut(s) 494
NspV TTCGAA 2 cut(s) 174, 751
OliI CACNNNNGTG 1 cut(s) 293
PciI ACATGT 1 cut(s) 490
PciSI GCTCTTC 1 cut(s) 1434
PcsI WCGNNNNNNNCGW 1 cut(s) 201
PdmI GAANNNNTTC 3 cut(s) 646, 1338, 1386
PfeI GAWTC 2 cut(s) 26, 95
PkrI GCNGC 2 cut(s) 52, 1306
PleI GAGTC 3 cut(s) 12, 73, 838
PmaCI CACGTG 1 cut(s) 512
PmlI CACGTG 1 cut(s) 512
PpsI GAGTC 3 cut(s) 12, 73, 838
Ppu21I YACGTR 1 cut(s) 512
PscI ACATGT 1 cut(s) 490
Psp6I CCWGG 1 cut(s) 787
PspCI CACGTG 1 cut(s) 512
PspGI CCWGG 1 cut(s) 787
PspN4I GGNNCC 1 cut(s) 37
PspPI GGNCC 3 cut(s) 122, 782, 1207
RsaI GTAC 3 cut(s) 906, 1151, 1365
RsaNI GTAC 3 cut(s) 905, 1150, 1364
RseI CAYNNNNRTG 1 cut(s) 293
SapI GCTCTTC 1 cut(s) 1434
SaqAI TTAA 4 cut(s) 654, 849, 1169, 1421
SatI GCNGC 2 cut(s) 51, 1305
Sau3AI GATC 4 cut(s) 192, 1069, 1083, 1279
Sau96I GGNCC 3 cut(s) 122, 782, 1207
SchI GAGTC 3 cut(s) 12, 74, 839
ScrFI CCNGG 1 cut(s) 789
SduI GDGCHC 1 cut(s) 418
SfaNI GCATC 4 cut(s) 473, 869, 1108, 1302
SfcI CTRYAG 2 cut(s) 250, 630
SfuI TTCGAA 2 cut(s) 174, 751
SinI GGWCC 1 cut(s) 782
SmiMI CAYNNNNRTG 1 cut(s) 293
SmlI CTYRAG 6 cut(s) 161, 677, 1104, 1202, 1420, 1445
SmoI CTYRAG 6 cut(s) 161, 677, 1104, 1202, 1420, 1445
Sse9I AATT 7 cut(s) 176, 605, 948, 963, 1077, 1317, 1474
SsiI CCGC 5 cut(s) 48, 51, 89, 785, 1370
SspI AATATT 1 cut(s) 1339
SspMI CTAG 1 cut(s) 762
StyD4I CCNGG 1 cut(s) 787
StyI CCWWGG 2 cut(s) 105, 198
TaaI ACNGT 3 cut(s) 582, 1041, 1405
TaiI ACGT 1 cut(s) 514
TaqI TCGA 6 cut(s) 24, 174, 231, 276, 356, 751
TasI AATT 7 cut(s) 176, 605, 948, 963, 1077, 1317, 1474
TatI WGTACW 1 cut(s) 1149
TauI GCSGC 1 cut(s) 53
TfiI GAWTC 2 cut(s) 26, 95
Tru1I TTAA 4 cut(s) 654, 849, 1169, 1421
Tru9I TTAA 4 cut(s) 654, 849, 1169, 1421
TscAI CASTG 3 cut(s) 322, 748, 873
TseFI GTSAC 1 cut(s) 1051
TseI GCWGC 1 cut(s) 1304
Tsp45I GTSAC 1 cut(s) 1051
TspDTI ATGAA 6 cut(s) 17, 615, 907, 943, 975, 1395
TspGWI ACGGA 3 cut(s) 28, 121, 640
TspRI CASTG 3 cut(s) 322, 748, 873
Vha464I CTTAAG 1 cut(s) 1420
VneI GTGCAC 1 cut(s) 414
VpaK11BI GGWCC 1 cut(s) 782
XceI RCATGY 1 cut(s) 494
XmnI GAANNNNTTC 3 cut(s) 646, 1338, 1386
XspI CTAG 1 cut(s) 762
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.