Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0006458.1

Orthogroup ID

OG0006183

Physical Location & Seq

Genomic Coordinates Forward (+)

89910 .. 96489

Gene Structure 6580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0006458.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1932 bp

atgagtttcctcaaaggcctcatcgactctttaggctccgtcttctccgaatcctcctcctcctcctcatacccaaaccctaccgcttccaattcctccgccatggacggcgtagctgggcccggagctgcttcggtcacgaacgagcgcgtggcgtacaagctcaaggggtactttgatttggccaaggaagagatcgccaaggctgttagggctgaagaatggggcttggttgaagacgccgttgcacactataatagcgcccagagaattttagccgaagctagctccactccggtgccttcctttatcagcgccagtgagcgggagaaggcgaaatcgtatcgtcaaaagatatcaaaatggcagggtcaagtttctgataggttacaagtcttaagtagacgtccaggtggtacgtccataagcaagaccgtagctcctgcacgaactactgcagctacatcaacaacgttgaattcacgaaatcatgtgatacccaagactctgcatcccagtacaagcatgccagcaacgaggagtcagaccaataatattgtaagatcaaaacctgtgcaagattctggtgcaggttatgatgaaaagttggttgaaatgataaatagtgccatagtggatagaagtccttctgttaaatgggaagatgttgctggtcttgagaaggtgaagaaaactttgatggagatggttatcttaccgactaagagaagagatttgttcactggccttcggaggccagctcgaggtctgcttctgtttggtccacctggtaatgggaaaaccatgcttgctaaggcagttgcttcagaatcagaggcaaccttttttaatgtatctgcatcttcactgacatcaaaatgggtgggagaggctgaaaagctcgtgcggacacttttcatggttgctatatccagacagccatctgtaattttcatggatgagattgatagtatcatgtcaacaaggcaggcaaacgaaaatgatgcaagcagaaggttgaagtcagagtttctaattcagtttgatggagtgacatctaatcctaatgatctagtaattgtgattggtgctactaataagcctcaagaactagatgacgcagttcttaggagattggtgaagagagtatacatacctttaccagatctacctgctaggagacttctcctaagtcacaaactcaaaggccaagcattttccttaccaagtggagatcttgaacgacttgcaagagacactgaaggttattcaggaagtgatctacaagcattgtgtgaagaagcagcaatgatgccaattagggaacttggtgaaaacattctcaccatcaaggcaaatcagaaaaacccatttctgatcatcatggcggagaccgaaccggaaacccagaaaccccaagaaacccgaaagaggggagattggtccttaaaggacttcgagatcggaaagccgctgggcaaaggcaagttcgggcgggtctacgtcgcccgagaagtcaagagccaatacgtcgtggcattgaaggtgttgttcaagaagcagataaagaagtacaacattcaccaccagctgaagagagagatggagattcagacgagtctgaggcaccccaacattcttcgtctctatggttggttccatgatgatgagcgcatcgtcttgattcttgagtacgcccatggcggtgagctttatggccttttgagggattgtacctactttactgagaaacgagccgcgacttatatattgagcttagcggaagctttggcctattgtcatgagaaggatgtgattcatagggacataaagcctgaaaacttgttgcttgatcatgaggtatgtataagattggtcctattgaactatgctgttgatttgtttgaactctggattctgggttatggttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0001578 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0006810 GO:0006928 GO:0006996 GO:0006997 GO:0006998 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008017 GO:0008088 GO:0008089 GO:0008092 GO:0008150 GO:0008568 GO:0009987 GO:0010256 GO:0010458 GO:0010970 GO:0012505 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019896 GO:0022402 GO:0022411 GO:0022607 GO:0030496 GO:0030705 GO:0031090 GO:0031468 GO:0031965 GO:0031967 GO:0031975 GO:0034214 GO:0034643 GO:0042623 GO:0043014 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0046907 GO:0047497 GO:0048285 GO:0048487 GO:0051013 GO:0051179 GO:0051228 GO:0051230 GO:0051234 GO:0051259 GO:0051260 GO:0051301 GO:0051640 GO:0051641 GO:0051646 GO:0051649 GO:0051654 GO:0051656 GO:0061024 GO:0061640 GO:0065003 GO:0071840 GO:0072384 GO:0090148 GO:0098930 GO:0099111 GO:0140014 GO:0140096 GO:1902850 GO:1903008 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Vps4_C

Protein Analysis

643

Amino Acids

71.72

Weight (kDa)

9.19

Isoelectric Point (pI)

46.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45500 AT2G45500 AT2G45500 AT2G45500 AT2G45500
fragaria_vesca	FvH4_7g12180 FvH4_7g12180
malus_domestica	MD02G1200800.v1.1
prunus_persica	Prupe.2G148300_v2.0.a1 Prupe.2G148300_v2.0.a1 Prupe.2G148300_v2.0.a1
pyrus_communis	pycom02g16400
rosa_chinensis	RchiOBHm_Chr1g0350931
rosa_laevigata	RLG00000028440
rosa_multiflora	Rmu_sc0002665.1_g000019 Rmu_sc0006458.1_g000018
rosa_roxburghii	Rroxscaffold_4G00304290
rosa_rugosa	Rorug01G0075600 Rorug01G0215400 Rorug01G0215400 Rorug06G0023300
rosa_samantha	Rh1AG230100 Rh1BG075200 Rh1BG200000 Rh1CG214500 Rh1DG227800
rosa_wichuraiana	Rw1G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	409
Acc36I	ACCTGC	2 cut(s)	581, 1180
AccB1I	GGYRCC	2 cut(s)	298, 1626
AccBSI	CCGCTC	1 cut(s)	325
AccI	GTMKAC	3 cut(s)	403, 1149, 1500
AccII	CGCG	2 cut(s)	150, 1760
AclI	AACGTT	1 cut(s)	473
AcoI	YGGCCR	1 cut(s)	183
AcsI	RAATTY	2 cut(s)	270, 478
AcuI	CTGAAG	4 cut(s)	237, 810, 1281, 1613
AcyI	GRCGYC	2 cut(s)	240, 406
AfaI	GTAC	7 cut(s)	158, 173, 418, 520, 1574, 1694, 1735
AfiI	CCNNNNNNNGG	6 cut(s)	324, 764, 794, 1431, 1432, 1726
AflII	CTTAAG	1 cut(s)	397
AgsI	TTSAA	9 cut(s)	236, 478, 614, 1021, 1241, 1543, 1555, 1885, 1907
AjnI	CCWGG	2 cut(s)	409, 787
AleI	CACNNNNGTG	1 cut(s)	296
Alw26I	GTCTC	4 cut(s)	1174, 1248, 1385, 1649
Ama87I	CYCGRG	2 cut(s)	762, 1509
AoxI	GGCC	8 cut(s)	16, 119, 183, 745, 755, 1207, 1717, 1791
ApaI	GGGCCC	1 cut(s)	123
ApeKI	GCWGC	3 cut(s)	128, 458, 1304
ApoI	RAATTY	2 cut(s)	270, 478
Asp700I	GAANNNNTTC	2 cut(s)	646, 1338
AspLEI	GCGC	4 cut(s)	150, 263, 317, 1674
AspS9I	GGNCC	5 cut(s)	119, 120, 782, 1443, 1876
AsuC2I	CCSGG	1 cut(s)	123
AsuHPI	GGTGA	6 cut(s)	697, 1150, 1336, 1343, 1574, 1718
AsuNHI	GCTAGC	1 cut(s)	284
AvaI	CYCGRG	2 cut(s)	762, 1509
AvaII	GGWCC	3 cut(s)	782, 1443, 1876
BaeGI	GKGCMC	1 cut(s)	123
BalI	TGGCCA	1 cut(s)	185
BanI	GGYRCC	2 cut(s)	298, 1626
BanII	GRGCYC	1 cut(s)	123
BarI	GAAGNNNNNNTAC	2 cut(s)	1133, 1165
BauI	CACGAG	1 cut(s)	902
BbsI	GAAGAC	2 cut(s)	34, 243
BbvI	GCAGC	3 cut(s)	115, 470, 1316
BccI	CCATC	6 cut(s)	694, 700, 949, 1040, 1355, 1597
BceAI	ACGGC	2 cut(s)	124, 227
BcgI	CGANNNNNNTGC	2 cut(s)	986, 1020
BciT130I	CCWGG	2 cut(s)	411, 789
BclI	TGATCA	2 cut(s)	1377, 1852
BcnI	CCSGG	1 cut(s)	123
BcoDI	GTCTC	4 cut(s)	1174, 1248, 1385, 1649
BfaI	CTAG	4 cut(s)	285, 1073, 1112, 1176
BfmI	CTRYAG	1 cut(s)	456
BfoI	RGCGCY	2 cut(s)	264, 318
BfrI	CTTAAG	1 cut(s)	397
BfuAI	ACCTGC	2 cut(s)	581, 1180
BglII	AGATCT	2 cut(s)	1165, 1234
BisI	GCNGC	5 cut(s)	129, 459, 1305, 1472, 1758
BlpI	GCTNAGC	1 cut(s)	1777
BlsI	GCNGC	5 cut(s)	130, 460, 1306, 1473, 1759
Bme1390I	CCNGG	3 cut(s)	123, 411, 789
Bme18I	GGWCC	3 cut(s)	782, 1443, 1876
BmeT110I	CYCGRG	2 cut(s)	762, 1509
BmgT120I	GGNCC	5 cut(s)	119, 120, 782, 1443, 1876
BmiI	GGNNCC	5 cut(s)	37, 121, 300, 1628, 1658
BmrFI	CCNGG	3 cut(s)	123, 411, 789
BmrI	ACTGGG	1 cut(s)	510
BmsI	GCATC	5 cut(s)	520, 869, 994, 1302, 1683
BmtI	GCTAGC	1 cut(s)	288
BmuI	ACTGGG	1 cut(s)	510
BpiI	GAAGAC	2 cut(s)	34, 243
BplI	GAGNNNNNCTC	2 cut(s)	745, 777
Bpu10I	CCTNAGC	1 cut(s)	813
Bpu1102I	GCTNAGC	1 cut(s)	1777
BpuEI	CTTGAG	4 cut(s)	149, 698, 1089, 1709
BpuMI	CCSGG	1 cut(s)	123
BsaBI	GATNNNNATC	1 cut(s)	710
BsaHI	GRCGYC	2 cut(s)	240, 406
BsaI	GGTCTC	1 cut(s)	1385
BsaJI	CCNNGG	4 cut(s)	102, 186, 201, 1699
BsaWI	WCCGGW	2 cut(s)	295, 1399
BsaXI	ACNNNNNCTCC	2 cut(s)	424, 454
Bsc4I	CCNNNNNNNGG	6 cut(s)	324, 764, 794, 1431, 1432, 1726
Bse1I	ACTGG	3 cut(s)	318, 516, 748
Bse3DI	GCAATG	1 cut(s)	1314
Bse8I	GATNNNNATC	1 cut(s)	710
BseBI	CCWGG	2 cut(s)	411, 789
BseDI	CCNNGG	4 cut(s)	102, 186, 201, 1699
BseGI	GGATG	3 cut(s)	511, 964, 1816
BseJI	GATNNNNATC	1 cut(s)	710
BseLI	CCNNNNNNNGG	6 cut(s)	324, 764, 794, 1431, 1432, 1726
BseMI	GCAATG	1 cut(s)	1314
BseMII	CTCAG	2 cut(s)	1613, 1737
BseNI	ACTGG	3 cut(s)	318, 516, 748
BseRI	GAGGAG	5 cut(s)	46, 49, 52, 55, 553
BseSI	GKGCMC	1 cut(s)	123
BseXI	GCAGC	3 cut(s)	115, 470, 1316
BseYI	CCCAGC	2 cut(s)	116, 1474
BsgI	GTGCAG	2 cut(s)	429, 609
Bsh1236I	CGCG	2 cut(s)	150, 1760
BshFI	GGCC	8 cut(s)	18, 121, 185, 747, 757, 1209, 1719, 1793
BshNI	GGYRCC	2 cut(s)	298, 1626
BsiHKCI	CYCGRG	2 cut(s)	762, 1509
BsiSI	CCGG	3 cut(s)	123, 296, 1400
BslFI	GGGAC	1 cut(s)	1838
BslI	CCNNNNNNNGG	6 cut(s)	324, 764, 794, 1431, 1432, 1726
BsmAI	GTCTC	4 cut(s)	1174, 1248, 1385, 1649
BsmBI	CGTCTC	1 cut(s)	1649
BsmFI	GGGAC	1 cut(s)	1838
BsnI	GGCC	8 cut(s)	18, 121, 185, 747, 757, 1209, 1719, 1793
Bso31I	GGTCTC	1 cut(s)	1385
BsoBI	CYCGRG	2 cut(s)	762, 1509
Bsp120I	GGGCCC	1 cut(s)	119
Bsp1286I	GDGCHC	1 cut(s)	123
Bsp143I	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
Bsp1720I	GCTNAGC	1 cut(s)	1777
Bsp19I	CCATGG	2 cut(s)	102, 1699
BspANI	GGCC	8 cut(s)	18, 121, 185, 747, 757, 1209, 1719, 1793
BspCNI	CTCAG	2 cut(s)	1614, 1738
BspFNI	CGCG	2 cut(s)	150, 1760
BspHI	TCATGA	2 cut(s)	1801, 1855
BspLI	GGNNCC	5 cut(s)	37, 121, 300, 1628, 1658
BspMAI	CTGCAG	1 cut(s)	460
BspMI	ACCTGC	2 cut(s)	581, 1180
BspOI	GCTAGC	1 cut(s)	288
BspT107I	GGYRCC	2 cut(s)	298, 1626
BspTI	CTTAAG	1 cut(s)	397
BspTNI	GGTCTC	1 cut(s)	1385
BsrBI	CCGCTC	1 cut(s)	325
BsrDI	GCAATG	1 cut(s)	1314
BsrI	ACTGG	3 cut(s)	318, 516, 748
BssECI	CCNNGG	4 cut(s)	102, 186, 201, 1699
BssMI	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
BssNAI	GTATAC	1 cut(s)	1150
BssNI	GRCGYC	2 cut(s)	240, 406
BssSI	CACGAG	1 cut(s)	902
BssT1I	CCWWGG	4 cut(s)	102, 186, 201, 1699
Bst1107I	GTATAC	1 cut(s)	1150
Bst2BI	CACGAG	1 cut(s)	902
Bst2UI	CCWGG	2 cut(s)	411, 789
Bst4CI	ACNGT	1 cut(s)	436
Bst6I	CTCTTC	4 cut(s)	186, 724, 1136, 1589
BstACI	GRCGYC	2 cut(s)	240, 406
BstAFI	CTTAAG	1 cut(s)	397
BstC8I	GCNNGC	7 cut(s)	286, 527, 531, 759, 810, 990, 1009
BstDEI	CTNAG	7 cut(s)	723, 813, 1127, 1190, 1622, 1746, 1777
BstDSI	CCRYGG	2 cut(s)	102, 1699
BstF5I	GGATG	3 cut(s)	511, 964, 1816
BstFNI	CGCG	2 cut(s)	150, 1760
BstH2I	RGCGCY	2 cut(s)	264, 318
BstHHI	GCGC	4 cut(s)	150, 263, 317, 1674
BstKTI	GATC	9 cut(s)	198, 566, 1072, 1168, 1237, 1282, 1380, 1464, 1855
BstMAI	GTCTC	4 cut(s)	1174, 1248, 1385, 1649
BstMBI	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
BstMWI	GCNNNNNNNGC	1 cut(s)	212
BstNI	CCWGG	2 cut(s)	411, 789
BstNSI	RCATGY	1 cut(s)	529
BstSCI	CCNGG	3 cut(s)	121, 409, 787
BstSFI	CTRYAG	1 cut(s)	456
BstSLI	GKGCMC	1 cut(s)	123
BstUI	CGCG	2 cut(s)	150, 1760
BstV1I	GCAGC	3 cut(s)	115, 470, 1316
BstV2I	GAAGAC	2 cut(s)	34, 243
BstX2I	RGATCY	2 cut(s)	1165, 1234
BstYI	RGATCY	2 cut(s)	1165, 1234
BstZ17I	GTATAC	1 cut(s)	1150
BsuRI	GGCC	8 cut(s)	18, 121, 185, 747, 757, 1209, 1719, 1793
BtgI	CCRYGG	2 cut(s)	102, 1699
BtsCI	GGATG	3 cut(s)	511, 964, 1816
BtsIMutI	CAGTG	4 cut(s)	325, 741, 866, 1257
BveI	ACCTGC	2 cut(s)	581, 1180
Cac8I	GCNNGC	7 cut(s)	286, 527, 531, 759, 810, 990, 1009
CciI	TCATGA	2 cut(s)	1801, 1855
CfoI	GCGC	4 cut(s)	150, 263, 317, 1674
Cfr13I	GGNCC	5 cut(s)	119, 120, 782, 1443, 1876
CseI	GACGC	2 cut(s)	248, 1127
CsiI	ACCWGGT	1 cut(s)	787
Csp6I	GTAC	7 cut(s)	157, 172, 417, 519, 1573, 1693, 1734
CspCI	CAANNNNNGTGG	2 cut(s)	864, 899
CviQI	GTAC	7 cut(s)	157, 172, 417, 519, 1573, 1693, 1734
DdeI	CTNAG	7 cut(s)	723, 813, 1127, 1190, 1622, 1746, 1777
DpnI	GATC	9 cut(s)	197, 565, 1071, 1167, 1236, 1281, 1379, 1463, 1854
DpnII	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
EaeI	YGGCCR	1 cut(s)	183
Eam1104I	CTCTTC	4 cut(s)	186, 724, 1136, 1589
EarI	CTCTTC	4 cut(s)	186, 724, 1136, 1589
EciI	GGCGGA	2 cut(s)	88, 1403
Eco130I	CCWWGG	4 cut(s)	102, 186, 201, 1699
Eco147I	AGGCCT	1 cut(s)	18
Eco24I	GRGCYC	1 cut(s)	123
Eco31I	GGTCTC	1 cut(s)	1385
Eco32I	GATATC	1 cut(s)	357
Eco47I	GGWCC	3 cut(s)	782, 1443, 1876
Eco57I	CTGAAG	4 cut(s)	237, 810, 1281, 1613
Eco88I	CYCGRG	2 cut(s)	762, 1509
EcoRI	GAATTC	1 cut(s)	478
EcoRII	CCWGG	2 cut(s)	409, 787
EcoRV	GATATC	1 cut(s)	357
EcoT14I	CCWWGG	4 cut(s)	102, 186, 201, 1699
EcoT38I	GRGCYC	1 cut(s)	123
ErhI	CCWWGG	4 cut(s)	102, 186, 201, 1699
Esp3I	CGTCTC	1 cut(s)	1649
FalI	AAGNNNNNCTT	2 cut(s)	158, 190
FaqI	GGGAC	1 cut(s)	1838
FauI	CCCGC	2 cut(s)	318, 1488
FbaI	TGATCA	2 cut(s)	1377, 1852
FblI	GTMKAC	3 cut(s)	403, 1149, 1500
Fnu4HI	GCNGC	5 cut(s)	129, 459, 1305, 1472, 1758
FokI	GGATG	3 cut(s)	498, 971, 1823
FriOI	GRGCYC	1 cut(s)	123
Fsp4HI	GCNGC	5 cut(s)	129, 459, 1305, 1472, 1758
FspBI	CTAG	4 cut(s)	285, 1073, 1112, 1176
GlaI	GCGC	4 cut(s)	149, 262, 316, 1673
GluI	GCNGC	5 cut(s)	129, 459, 1305, 1472, 1758
GsaI	CCCAGC	2 cut(s)	120, 1478
HaeII	RGCGCY	2 cut(s)	264, 318
HaeIII	GGCC	8 cut(s)	18, 121, 185, 747, 757, 1209, 1719, 1793
HapII	CCGG	3 cut(s)	123, 296, 1400
HgaI	GACGC	2 cut(s)	248, 1127
HhaI	GCGC	4 cut(s)	150, 263, 317, 1674
Hin1I	GRCGYC	2 cut(s)	240, 406
Hin6I	GCGC	4 cut(s)	148, 261, 315, 1672
HinP1I	GCGC	4 cut(s)	148, 261, 315, 1672
HincII	GTYRAC	1 cut(s)	981
HindII	GTYRAC	1 cut(s)	981
HindIII	AAGCTT	1 cut(s)	1785
HpaII	CCGG	3 cut(s)	123, 296, 1400
HphI	GGTGA	6 cut(s)	697, 1150, 1336, 1343, 1574, 1718
Hpy166II	GTNNAC	6 cut(s)	404, 741, 785, 981, 1150, 1501
Hpy8I	GTNNAC	6 cut(s)	404, 741, 785, 981, 1150, 1501
Hpy99I	CGWCG	2 cut(s)	1508, 1535
HpyAV	CCTTC	9 cut(s)	312, 325, 657, 676, 758, 1008, 1256, 1537, 1801
HpyCH4III	ACNGT	1 cut(s)	436
HpyCH4IV	ACGT	5 cut(s)	406, 419, 473, 1503, 1530
HpyCH4V	TGCA	9 cut(s)	248, 446, 458, 511, 577, 590, 860, 1007, 1250
HpyF10VI	GCNNNNNNNGC	1 cut(s)	212
HpyF3I	CTNAG	7 cut(s)	723, 813, 1127, 1190, 1622, 1746, 1777
HpySE526I	ACGT	5 cut(s)	406, 419, 473, 1503, 1530
Hsp92I	GRCGYC	2 cut(s)	240, 406
HspAI	GCGC	4 cut(s)	148, 261, 315, 1672
Ksp22I	TGATCA	2 cut(s)	1377, 1852
Kzo9I	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
LmnI	GCTCC	4 cut(s)	41, 125, 293, 445
Lsp1109I	GCAGC	3 cut(s)	115, 470, 1316
LweI	GCATC	5 cut(s)	520, 869, 994, 1302, 1683
MabI	ACCWGGT	1 cut(s)	787
MaeI	CTAG	4 cut(s)	285, 1073, 1112, 1176
MaeII	ACGT	5 cut(s)	406, 419, 473, 1503, 1530
MaeIII	GTNAC	4 cut(s)	136, 387, 1051, 1193
MalI	GATC	9 cut(s)	197, 565, 1071, 1167, 1236, 1281, 1379, 1463, 1854
MbiI	CCGCTC	1 cut(s)	325
MboI	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
MflI	RGATCY	2 cut(s)	1165, 1234
MhlI	GDGCHC	1 cut(s)	123
MlsI	TGGCCA	1 cut(s)	185
MluCI	AATT	7 cut(s)	91, 270, 478, 948, 1035, 1077, 1317
MluNI	TGGCCA	1 cut(s)	185
MlyI	GAGTC	4 cut(s)	20, 499, 550, 1627
Mox20I	TGGCCA	1 cut(s)	185
MroXI	GAANNNNTTC	2 cut(s)	646, 1338
MscI	TGGCCA	1 cut(s)	185
MseI	TTAA	4 cut(s)	398, 654, 849, 1448
MslI	CAYNNNNRTG	4 cut(s)	296, 877, 1665, 1704
Msp20I	TGGCCA	1 cut(s)	185
MspA1I	CMGCKG	2 cut(s)	1474, 1591
MspCI	CTTAAG	1 cut(s)	397
MspI	CCGG	3 cut(s)	123, 296, 1400
MspR9I	CCNGG	3 cut(s)	123, 411, 789
MvaI	CCWGG	2 cut(s)	411, 789
MvnI	CGCG	2 cut(s)	150, 1760
MwoI	GCNNNNNNNGC	1 cut(s)	212
NciI	CCSGG	1 cut(s)	123
NcoI	CCATGG	2 cut(s)	102, 1699
NdeII	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
NheI	GCTAGC	1 cut(s)	284
NlaIV	GGNNCC	5 cut(s)	37, 121, 300, 1628, 1658
NmuCI	GTSAC	3 cut(s)	136, 1051, 1193
NspI	RCATGY	1 cut(s)	529
OliI	CACNNNNGTG	1 cut(s)	296
PaeI	GCATGC	1 cut(s)	529
PaeR7I	CTCGAG	1 cut(s)	762
PagI	TCATGA	2 cut(s)	1801, 1855
PceI	AGGCCT	1 cut(s)	18
PdmI	GAANNNNTTC	2 cut(s)	646, 1338
PfeI	GAWTC	7 cut(s)	50, 581, 830, 1609, 1684, 1816, 1915
PkrI	GCNGC	5 cut(s)	130, 460, 1306, 1473, 1759
PleI	GAGTC	4 cut(s)	20, 499, 549, 1626
PpsI	GAGTC	4 cut(s)	20, 499, 549, 1626
Psp1406I	AACGTT	1 cut(s)	473
Psp6I	CCWGG	2 cut(s)	409, 787
PspFI	CCCAGC	2 cut(s)	116, 1474
PspGI	CCWGG	2 cut(s)	409, 787
PspN4I	GGNNCC	5 cut(s)	37, 121, 300, 1628, 1658
PspOMI	GGGCCC	1 cut(s)	119
PspPI	GGNCC	5 cut(s)	119, 120, 782, 1443, 1876
PspXI	VCTCGAGB	1 cut(s)	762
PstI	CTGCAG	1 cut(s)	460
PsuI	RGATCY	2 cut(s)	1165, 1234
PvuII	CAGCTG	1 cut(s)	1591
RsaI	GTAC	7 cut(s)	158, 173, 418, 520, 1574, 1694, 1735
RsaNI	GTAC	7 cut(s)	157, 172, 417, 519, 1573, 1693, 1734
RseI	CAYNNNNRTG	4 cut(s)	296, 877, 1665, 1704
SaqAI	TTAA	4 cut(s)	398, 654, 849, 1448
SatI	GCNGC	5 cut(s)	129, 459, 1305, 1472, 1758
Sau3AI	GATC	9 cut(s)	195, 563, 1069, 1165, 1234, 1279, 1377, 1461, 1852
Sau96I	GGNCC	5 cut(s)	119, 120, 782, 1443, 1876
SchI	GAGTC	4 cut(s)	20, 499, 550, 1627
ScrFI	CCNGG	3 cut(s)	123, 411, 789
SduI	GDGCHC	1 cut(s)	123
SexAI	ACCWGGT	1 cut(s)	787
SfaNI	GCATC	5 cut(s)	520, 869, 994, 1302, 1683
SfcI	CTRYAG	1 cut(s)	456
Sfr274I	CTCGAG	1 cut(s)	762
SinI	GGWCC	3 cut(s)	782, 1443, 1876
SlaI	CTCGAG	1 cut(s)	762
SmiMI	CAYNNNNRTG	4 cut(s)	296, 877, 1665, 1704
SmlI	CTYRAG	6 cut(s)	164, 397, 677, 762, 1104, 1688
SmoI	CTYRAG	6 cut(s)	164, 397, 677, 762, 1104, 1688
SphI	GCATGC	1 cut(s)	529
Sse9I	AATT	7 cut(s)	91, 270, 478, 948, 1035, 1077, 1317
SseBI	AGGCCT	1 cut(s)	18
SspI	AATATT	1 cut(s)	556
SspMI	CTAG	4 cut(s)	285, 1073, 1112, 1176
StuI	AGGCCT	1 cut(s)	18
StyD4I	CCNGG	3 cut(s)	121, 409, 787
StyI	CCWWGG	4 cut(s)	102, 186, 201, 1699
TaaI	ACNGT	1 cut(s)	436
TaiI	ACGT	5 cut(s)	409, 422, 476, 1506, 1533
TaqI	TCGA	3 cut(s)	24, 763, 1458
TaqII	GACCGA	2 cut(s)	124, 1409
TasI	AATT	7 cut(s)	91, 270, 478, 948, 1035, 1077, 1317
TatI	WGTACW	2 cut(s)	518, 1572
TauI	GCSGC	2 cut(s)	1474, 1760
TfiI	GAWTC	7 cut(s)	50, 581, 830, 1609, 1684, 1816, 1915
Tru1I	TTAA	4 cut(s)	398, 654, 849, 1448
Tru9I	TTAA	4 cut(s)	398, 654, 849, 1448
TscAI	CASTG	4 cut(s)	325, 748, 873, 1264
TseFI	GTSAC	3 cut(s)	136, 1051, 1193
TseI	GCWGC	3 cut(s)	128, 458, 1304
Tsp45I	GTSAC	3 cut(s)	136, 1051, 1193
TspDTI	ATGAA	4 cut(s)	615, 907, 943, 1808
TspGWI	ACGGA	1 cut(s)	28
TspRI	CASTG	4 cut(s)	325, 748, 873, 1264
Vha464I	CTTAAG	1 cut(s)	397
VpaK11BI	GGWCC	3 cut(s)	782, 1443, 1876
XapI	RAATTY	2 cut(s)	270, 478
XceI	RCATGY	1 cut(s)	529
XhoI	CTCGAG	1 cut(s)	762
XmiI	GTMKAC	3 cut(s)	403, 1149, 1500
XmnI	GAANNNNTTC	2 cut(s)	646, 1338
XspI	CTAG	4 cut(s)	285, 1073, 1112, 1176
ZraI	GACGTC	1 cut(s)	407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.