Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0006183

Physical Location & Seq

Genomic Coordinates Reverse (-)

43621235 .. 43626452

Gene Structure 5218 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG230100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGAGTTTCCTCAAAGGCCTCATCGACTCTTTAGGCTCCGTCTTCTCCGAATCCTCCTCCTCCTCCTCATACCCAAACCCTACCGCTTCCAATTCCTCCGCCATGGACGGCGTAGCTGGGCCCGGAGCTGCTTCGGTCACGAACGAGCGCGTGGCGTACAAGCTCAAGGGGTACTTTGATTTGGCCAAGGAAGAGATCGCCAAGGCTGTTAGGGCTGAAGAATGGGGCTTGGTTGAAGACGCCGTTGCACACTATAATAGCGCCCAGAGAATTCTAGCCGAAGCTAGCTCCACTCCAGTGCCTTCCTTTATCAGCGCCAGTGAGCGGGAGAAGGTGAAATCGTATCGCCAAAAGATATCAAAATGGCAGGGTCAAGTTTCTGATAGGTTACAAGTCTTAAGTAGACGTCCAGGTGGTACGTCCATAAGCAAGACCGTAGCTCCTGCACGAACTACTGCAGCTACATCAACAATGTTGAATTCACGAAATCATGTGATACCCAAGACTCTGCATCCCAGTACAAGCATGCCAGCAACGAGGAGTCAGACCAATAATATTGTAAGATCAAAACCTGTGCAAGATTCTGGTGCAGGTTATGATGAAAAGTTGGTTGAAATGATAAATAGTGCCATAGTGGATAGAAGTCCTTCTGTTAAATGGGAAGATGTTGCTGGTCTTGAGAAGGTGAAGAAAACTTTGATGGAGATGGTTATTTTACCGACTAAGAGAAGAGATTTGTTCACTGGCCTTCGAAGGCCAGCTCGAGGTCTGCTTCTGTTTGGTCCACCTGGTAATGGGAAAACCATGCTTGCTAAGGCAGTTGCTTCAGAATCAGAGGCAACCTTTTTTAATGTATCTGCATCTTCACTGACATCAAAATGGATTGATAGTATCATGTCAACAAGGCAGGCAAACGAAAATGATGCAAGCAGAAGGTTGAAGTCAGAGTTTCTAATTCAGTTTGATGGAGTGACATCTAATCCTAATGATCTAGTAATTGTGATTGGTGCTACTAATAAGCCTCAAGAACTAGATGACGCAGTTCTTAGGAGATTGGTGAAGAGAGTATACATACCTTTACCAGATCTACCTGCTAGGAGACTTCTCCTAAGTCACAAACTCAAAGGCCAAGCATTTTCCTTACCAAGTGGAGATCTTGAACGACTTGCAAGAGACACTGAAGGTTATTCAGGAAGTGATCTACAAGCATTGTGTGAAGAAGCAGCAATGATGCCAATTAGGGAACTTGGTGAAAACATTCTCACCATCAAGGCAAATCAGGTAAGACCACTAAGAATTGAAGATTTTCAGAAGGCAATGACTGTAATCAGGCCAAGTTTAAGCAAAAGCAAGTGGGAAGAGCTTGAGCAATGGAACGAGGAATTTGGGTCTAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0001578 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0006810 GO:0006928 GO:0006996 GO:0006997 GO:0006998 GO:0007010 GO:0007017 GO:0007018 GO:0007049 GO:0007051 GO:0007052 GO:0008017 GO:0008088 GO:0008089 GO:0008092 GO:0008150 GO:0008568 GO:0009987 GO:0010256 GO:0010458 GO:0010970 GO:0012505 GO:0015631 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019896 GO:0022402 GO:0022411 GO:0022607 GO:0030496 GO:0030705 GO:0031090 GO:0031468 GO:0031965 GO:0031967 GO:0031975 GO:0034214 GO:0034643 GO:0042623 GO:0043014 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044770 GO:0044772 GO:0046907 GO:0047497 GO:0048285 GO:0048487 GO:0051013 GO:0051179 GO:0051228 GO:0051230 GO:0051234 GO:0051259 GO:0051260 GO:0051301 GO:0051640 GO:0051641 GO:0051646 GO:0051649 GO:0051654 GO:0051656 GO:0061024 GO:0061640 GO:0065003 GO:0071840 GO:0072384 GO:0090148 GO:0098930 GO:0099111 GO:0140014 GO:0140096 GO:1902850 GO:1903008 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Vps4_C

Protein Analysis

465

Amino Acids

51.02

Weight (kDa)

9.37

Isoelectric Point (pI)

52.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	257 - 295	1.6e-10	ATPase family associated with various cellular activities (AAA)
AAA	PF00004	295 - 360	6.2e-10	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	385 - 419	8.2e-14	AAA+ lid domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006183)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G45500 AT2G45500 AT2G45500 AT2G45500 AT2G45500
fragaria_vesca	FvH4_7g12180 FvH4_7g12180
malus_domestica	MD02G1200800.v1.1
prunus_persica	Prupe.2G148300_v2.0.a1 Prupe.2G148300_v2.0.a1 Prupe.2G148300_v2.0.a1
pyrus_communis	pycom02g16400
rosa_chinensis	RchiOBHm_Chr1g0350931
rosa_laevigata	RLG00000028440
rosa_multiflora	Rmu_sc0002665.1_g000019 Rmu_sc0006458.1_g000018
rosa_roxburghii	Rroxscaffold_4G00304290
rosa_rugosa	Rorug01G0075600 Rorug01G0215400 Rorug01G0215400 Rorug06G0023300
rosa_samantha	Rh1AG230100 Rh1BG075200 Rh1BG200000 Rh1CG214500 Rh1DG227800
rosa_wichuraiana	Rw1G019950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	409
Acc36I	ACCTGC	2 cut(s)	581, 1099
AccBSI	CCGCTC	1 cut(s)	325
AccI	GTMKAC	2 cut(s)	403, 1068
AccII	CGCG	1 cut(s)	150
AciI	CCGC	3 cut(s)	84, 99, 325
AcoI	YGGCCR	1 cut(s)	183
AcsI	RAATTY	3 cut(s)	270, 478, 1382
AcuI	CTGAAG	3 cut(s)	237, 810, 1200
AcyI	GRCGYC	2 cut(s)	240, 406
AfaI	GTAC	4 cut(s)	158, 173, 418, 520
AfiI	CCNNNNNNNGG	3 cut(s)	324, 764, 794
AflII	CTTAAG	1 cut(s)	397
AgsI	TTSAA	6 cut(s)	236, 478, 614, 940, 1160, 1301
AjnI	CCWGG	2 cut(s)	409, 787
AleI	CACNNNNGTG	1 cut(s)	296
AluBI	AGCT	9 cut(s)	116, 128, 163, 284, 288, 440, 461, 761, 1363
AluI	AGCT	9 cut(s)	116, 128, 163, 284, 288, 440, 461, 761, 1363
Alw26I	GTCTC	2 cut(s)	1093, 1167
Ama87I	CYCGRG	1 cut(s)	762
AoxI	GGCC	7 cut(s)	16, 119, 183, 745, 755, 1126, 1331
ApaI	GGGCCC	1 cut(s)	123
ApeKI	GCWGC	3 cut(s)	128, 458, 1223
ApoI	RAATTY	3 cut(s)	270, 478, 1382
Asp700I	GAANNNNTTC	3 cut(s)	646, 1257, 1305
AspLEI	GCGC	3 cut(s)	150, 263, 317
AspS9I	GGNCC	3 cut(s)	119, 120, 782
AsuC2I	CCSGG	1 cut(s)	123
AsuHPI	GGTGA	5 cut(s)	346, 697, 1069, 1255, 1262
AsuII	TTCGAA	1 cut(s)	751
AsuNHI	GCTAGC	1 cut(s)	284
AvaI	CYCGRG	1 cut(s)	762
AvaII	GGWCC	1 cut(s)	782
BaeGI	GKGCMC	1 cut(s)	123
BalI	TGGCCA	1 cut(s)	185
BanII	GRGCYC	1 cut(s)	123
BarI	GAAGNNNNNNTAC	2 cut(s)	1052, 1084
BbsI	GAAGAC	2 cut(s)	34, 243
BbvI	GCAGC	3 cut(s)	115, 470, 1235
BccI	CCATC	4 cut(s)	694, 700, 959, 1274
BceAI	ACGGC	2 cut(s)	124, 227
BcgI	CGANNNNNNTGC	2 cut(s)	905, 939
BciT130I	CCWGG	2 cut(s)	411, 789
BcnI	CCSGG	1 cut(s)	123
BcoDI	GTCTC	2 cut(s)	1093, 1167
BfaI	CTAG	5 cut(s)	275, 285, 992, 1031, 1095
BfmI	CTRYAG	1 cut(s)	456
BfoI	RGCGCY	2 cut(s)	264, 318
BfrI	CTTAAG	1 cut(s)	397
BfuAI	ACCTGC	2 cut(s)	581, 1099
BglII	AGATCT	2 cut(s)	1084, 1153
BisI	GCNGC	3 cut(s)	129, 459, 1224
BlsI	GCNGC	3 cut(s)	130, 460, 1225
Bme1390I	CCNGG	3 cut(s)	123, 411, 789
Bme18I	GGWCC	1 cut(s)	782
BmeT110I	CYCGRG	1 cut(s)	762
BmgT120I	GGNCC	3 cut(s)	119, 120, 782
BmiI	GGNNCC	2 cut(s)	37, 121
BmrFI	CCNGG	3 cut(s)	123, 411, 789
BmrI	ACTGGG	1 cut(s)	510
BmsI	GCATC	4 cut(s)	520, 869, 913, 1221
BmtI	GCTAGC	1 cut(s)	288
BmuI	ACTGGG	1 cut(s)	510
BpiI	GAAGAC	2 cut(s)	34, 243
BpmI	CTGGAG	1 cut(s)	279
Bpu10I	CCTNAGC	1 cut(s)	813
Bpu14I	TTCGAA	1 cut(s)	751
BpuEI	CTTGAG	4 cut(s)	149, 698, 1008, 1385
BpuMI	CCSGG	1 cut(s)	123
BsaHI	GRCGYC	2 cut(s)	240, 406
BsaJI	CCNNGG	3 cut(s)	102, 186, 201
BsaXI	ACNNNNNCTCC	2 cut(s)	424, 454
Bsc4I	CCNNNNNNNGG	3 cut(s)	324, 764, 794
Bse1I	ACTGG	4 cut(s)	296, 318, 516, 748
Bse3DI	GCAATG	3 cut(s)	1233, 1323, 1376
BseBI	CCWGG	2 cut(s)	411, 789
BseDI	CCNNGG	3 cut(s)	102, 186, 201
BseGI	GGATG	1 cut(s)	511
BseLI	CCNNNNNNNGG	3 cut(s)	324, 764, 794
BseMI	GCAATG	3 cut(s)	1233, 1323, 1376
BseNI	ACTGG	4 cut(s)	296, 318, 516, 748
BseRI	GAGGAG	5 cut(s)	46, 49, 52, 55, 553
BseSI	GKGCMC	1 cut(s)	123
BseXI	GCAGC	3 cut(s)	115, 470, 1235
BseYI	CCCAGC	1 cut(s)	116
BsgI	GTGCAG	2 cut(s)	429, 609
Bsh1236I	CGCG	1 cut(s)	150
BshFI	GGCC	7 cut(s)	18, 121, 185, 747, 757, 1128, 1333
BsiHKCI	CYCGRG	1 cut(s)	762
BsiSI	CCGG	1 cut(s)	123
BslI	CCNNNNNNNGG	3 cut(s)	324, 764, 794
BsmAI	GTCTC	2 cut(s)	1093, 1167
BsnI	GGCC	7 cut(s)	18, 121, 185, 747, 757, 1128, 1333
BsoBI	CYCGRG	1 cut(s)	762
Bsp119I	TTCGAA	1 cut(s)	751
Bsp120I	GGGCCC	1 cut(s)	119
Bsp1286I	GDGCHC	1 cut(s)	123
Bsp143I	GATC	6 cut(s)	195, 563, 988, 1084, 1153, 1198
Bsp19I	CCATGG	1 cut(s)	102
BspACI	CCGC	3 cut(s)	84, 99, 325
BspANI	GGCC	7 cut(s)	18, 121, 185, 747, 757, 1128, 1333
BspFNI	CGCG	1 cut(s)	150
BspLI	GGNNCC	2 cut(s)	37, 121
BspMAI	CTGCAG	1 cut(s)	460
BspMI	ACCTGC	2 cut(s)	581, 1099
BspOI	GCTAGC	1 cut(s)	288
BspQI	GCTCTTC	1 cut(s)	1353
BspT104I	TTCGAA	1 cut(s)	751
BspTI	CTTAAG	1 cut(s)	397
BsrBI	CCGCTC	1 cut(s)	325
BsrDI	GCAATG	3 cut(s)	1233, 1323, 1376
BsrI	ACTGG	4 cut(s)	296, 318, 516, 748
BssECI	CCNNGG	3 cut(s)	102, 186, 201
BssMI	GATC	6 cut(s)	195, 563, 988, 1084, 1153, 1198
BssNAI	GTATAC	1 cut(s)	1069
BssNI	GRCGYC	2 cut(s)	240, 406
BssT1I	CCWWGG	3 cut(s)	102, 186, 201
Bst1107I	GTATAC	1 cut(s)	1069
Bst2UI	CCWGG	2 cut(s)	411, 789
Bst4CI	ACNGT	2 cut(s)	436, 1324
Bst6I	CTCTTC	4 cut(s)	186, 724, 1055, 1353
BstACI	GRCGYC	2 cut(s)	240, 406
BstAFI	CTTAAG	1 cut(s)	397
BstBI	TTCGAA	1 cut(s)	751
BstC8I	GCNNGC	7 cut(s)	286, 527, 531, 759, 810, 909, 928
BstDEI	CTNAG	5 cut(s)	723, 813, 1046, 1109, 1292
BstDSI	CCRYGG	1 cut(s)	102
BstF5I	GGATG	1 cut(s)	511
BstFNI	CGCG	1 cut(s)	150
BstH2I	RGCGCY	2 cut(s)	264, 318
BstHHI	GCGC	3 cut(s)	150, 263, 317
BstKTI	GATC	6 cut(s)	198, 566, 991, 1087, 1156, 1201
BstMAI	GTCTC	2 cut(s)	1093, 1167
BstMBI	GATC	6 cut(s)	195, 563, 988, 1084, 1153, 1198
BstMWI	GCNNNNNNNGC	1 cut(s)	212
BstNI	CCWGG	2 cut(s)	411, 789
BstNSI	RCATGY	1 cut(s)	529
BstSCI	CCNGG	3 cut(s)	121, 409, 787
BstSFI	CTRYAG	1 cut(s)	456
BstSLI	GKGCMC	1 cut(s)	123
BstUI	CGCG	1 cut(s)	150
BstV1I	GCAGC	3 cut(s)	115, 470, 1235
BstV2I	GAAGAC	2 cut(s)	34, 243
BstX2I	RGATCY	2 cut(s)	1084, 1153
BstYI	RGATCY	2 cut(s)	1084, 1153
BstZ17I	GTATAC	1 cut(s)	1069
BsuRI	GGCC	7 cut(s)	18, 121, 185, 747, 757, 1128, 1333
BtgI	CCRYGG	1 cut(s)	102
BtsCI	GGATG	1 cut(s)	511
BtsIMutI	CAGTG	5 cut(s)	303, 325, 741, 866, 1176
BveI	ACCTGC	2 cut(s)	581, 1099
Cac8I	GCNNGC	7 cut(s)	286, 527, 531, 759, 810, 909, 928
CfoI	GCGC	3 cut(s)	150, 263, 317
Cfr13I	GGNCC	3 cut(s)	119, 120, 782
CseI	GACGC	2 cut(s)	248, 1046
CsiI	ACCWGGT	1 cut(s)	787
Csp6I	GTAC	4 cut(s)	157, 172, 417, 519
CviAII	CATG	5 cut(s)	103, 491, 526, 805, 895
CviQI	GTAC	4 cut(s)	157, 172, 417, 519
DdeI	CTNAG	5 cut(s)	723, 813, 1046, 1109, 1292
DpnI	GATC	6 cut(s)	197, 565, 990, 1086, 1155, 1200
DpnII	GATC	6 cut(s)	195, 563, 988, 1084, 1153, 1198
EaeI	YGGCCR	1 cut(s)	183
Eam1104I	CTCTTC	4 cut(s)	186, 724, 1055, 1353
EarI	CTCTTC	4 cut(s)	186, 724, 1055, 1353
EciI	GGCGGA	1 cut(s)	88
Eco130I	CCWWGG	3 cut(s)	102, 186, 201
Eco147I	AGGCCT	1 cut(s)	18
Eco24I	GRGCYC	1 cut(s)	123
Eco32I	GATATC	1 cut(s)	357
Eco47I	GGWCC	1 cut(s)	782
Eco57I	CTGAAG	3 cut(s)	237, 810, 1200
Eco88I	CYCGRG	1 cut(s)	762
EcoRI	GAATTC	2 cut(s)	270, 478
EcoRII	CCWGG	2 cut(s)	409, 787
EcoRV	GATATC	1 cut(s)	357
EcoT14I	CCWWGG	3 cut(s)	102, 186, 201
EcoT38I	GRGCYC	1 cut(s)	123
ErhI	CCWWGG	3 cut(s)	102, 186, 201
FaeI	CATG	5 cut(s)	106, 494, 529, 808, 898
FalI	AAGNNNNNCTT	2 cut(s)	158, 190
FatI	CATG	5 cut(s)	102, 490, 525, 804, 894
FauI	CCCGC	1 cut(s)	318
FblI	GTMKAC	2 cut(s)	403, 1068
Fnu4HI	GCNGC	3 cut(s)	129, 459, 1224
FokI	GGATG	1 cut(s)	498
FriOI	GRGCYC	1 cut(s)	123
Fsp4HI	GCNGC	3 cut(s)	129, 459, 1224
FspBI	CTAG	5 cut(s)	275, 285, 992, 1031, 1095
GlaI	GCGC	3 cut(s)	149, 262, 316
GluI	GCNGC	3 cut(s)	129, 459, 1224
GsaI	CCCAGC	1 cut(s)	120
GsuI	CTGGAG	1 cut(s)	279
HaeII	RGCGCY	2 cut(s)	264, 318
HaeIII	GGCC	7 cut(s)	18, 121, 185, 747, 757, 1128, 1333
HapII	CCGG	1 cut(s)	123
HgaI	GACGC	2 cut(s)	248, 1046
HhaI	GCGC	3 cut(s)	150, 263, 317
Hin1I	GRCGYC	2 cut(s)	240, 406
Hin1II	CATG	5 cut(s)	106, 494, 529, 808, 898
Hin6I	GCGC	3 cut(s)	148, 261, 315
HinP1I	GCGC	3 cut(s)	148, 261, 315
HincII	GTYRAC	1 cut(s)	900
HindII	GTYRAC	1 cut(s)	900
HinfI	GANTC	6 cut(s)	26, 50, 505, 541, 581, 830
HpaII	CCGG	1 cut(s)	123
HphI	GGTGA	5 cut(s)	346, 697, 1069, 1255, 1262
Hpy166II	GTNNAC	5 cut(s)	404, 741, 785, 900, 1069
Hpy188I	TCNGA	7 cut(s)	49, 382, 546, 829, 835, 946, 1311
Hpy188III	TCNNGA	6 cut(s)	139, 483, 677, 1025, 1157, 1191
Hpy8I	GTNNAC	5 cut(s)	404, 741, 785, 900, 1069
HpyAV	CCTTC	9 cut(s)	312, 325, 657, 676, 747, 758, 927, 1175, 1306
HpyCH4III	ACNGT	2 cut(s)	436, 1324
HpyCH4IV	ACGT	2 cut(s)	406, 419
HpyCH4V	TGCA	9 cut(s)	248, 446, 458, 511, 577, 590, 860, 926, 1169
HpyF10VI	GCNNNNNNNGC	1 cut(s)	212
HpyF3I	CTNAG	5 cut(s)	723, 813, 1046, 1109, 1292
HpySE526I	ACGT	2 cut(s)	406, 419
Hsp92I	GRCGYC	2 cut(s)	240, 406
Hsp92II	CATG	5 cut(s)	106, 494, 529, 808, 898
HspAI	GCGC	3 cut(s)	148, 261, 315
Kzo9I	GATC	6 cut(s)	195, 563, 988, 1084, 1153, 1198
LguI	GCTCTTC	1 cut(s)	1353
LmnI	GCTCC	4 cut(s)	41, 125, 293, 445
Lsp1109I	GCAGC	3 cut(s)	115, 470, 1235
LweI	GCATC	4 cut(s)	520, 869, 913, 1221
MabI	ACCWGGT	1 cut(s)	787
MaeI	CTAG	5 cut(s)	275, 285, 992, 1031, 1095
MaeII	ACGT	2 cut(s)	406, 419
MaeIII	GTNAC	4 cut(s)	136, 387, 970, 1112
MalI	GATC	6 cut(s)	197, 565, 990, 1086, 1155, 1200
MbiI	CCGCTC	1 cut(s)	325
MboI	GATC	6 cut(s)	195, 563, 988, 1084, 1153, 1198
MflI	RGATCY	2 cut(s)	1084, 1153
MhlI	GDGCHC	1 cut(s)	123
MlsI	TGGCCA	1 cut(s)	185
MluCI	AATT	8 cut(s)	91, 270, 478, 954, 996, 1236, 1296, 1382
MluNI	TGGCCA	1 cut(s)	185
MlyI	GAGTC	3 cut(s)	20, 499, 550
Mox20I	TGGCCA	1 cut(s)	185
MroXI	GAANNNNTTC	3 cut(s)	646, 1257, 1305
MscI	TGGCCA	1 cut(s)	185
MseI	TTAA	4 cut(s)	398, 654, 849, 1340
MslI	CAYNNNNRTG	2 cut(s)	296, 877
Msp20I	TGGCCA	1 cut(s)	185
MspCI	CTTAAG	1 cut(s)	397
MspI	CCGG	1 cut(s)	123
MspR9I	CCNGG	3 cut(s)	123, 411, 789
MvaI	CCWGG	2 cut(s)	411, 789
MvnI	CGCG	1 cut(s)	150
MwoI	GCNNNNNNNGC	1 cut(s)	212
NciI	CCSGG	1 cut(s)	123
NcoI	CCATGG	1 cut(s)	102
NdeII	GATC	6 cut(s)	195, 563, 988, 1084, 1153, 1198
NheI	GCTAGC	1 cut(s)	284
NlaIII	CATG	5 cut(s)	106, 494, 529, 808, 898
NlaIV	GGNNCC	2 cut(s)	37, 121
NmuCI	GTSAC	3 cut(s)	136, 970, 1112
NspI	RCATGY	1 cut(s)	529
NspV	TTCGAA	1 cut(s)	751
OliI	CACNNNNGTG	1 cut(s)	296
PaeI	GCATGC	1 cut(s)	529
PaeR7I	CTCGAG	1 cut(s)	762
PceI	AGGCCT	1 cut(s)	18
PciSI	GCTCTTC	1 cut(s)	1353
PdmI	GAANNNNTTC	3 cut(s)	646, 1257, 1305
PfeI	GAWTC	3 cut(s)	50, 581, 830
PkrI	GCNGC	3 cut(s)	130, 460, 1225
PleI	GAGTC	3 cut(s)	20, 499, 549
PpsI	GAGTC	3 cut(s)	20, 499, 549
Psp6I	CCWGG	2 cut(s)	409, 787
PspFI	CCCAGC	1 cut(s)	116
PspGI	CCWGG	2 cut(s)	409, 787
PspN4I	GGNNCC	2 cut(s)	37, 121
PspOMI	GGGCCC	1 cut(s)	119
PspPI	GGNCC	3 cut(s)	119, 120, 782
PspXI	VCTCGAGB	1 cut(s)	762
PstI	CTGCAG	1 cut(s)	460
PsuI	RGATCY	2 cut(s)	1084, 1153
RsaI	GTAC	4 cut(s)	158, 173, 418, 520
RsaNI	GTAC	4 cut(s)	157, 172, 417, 519
RseI	CAYNNNNRTG	2 cut(s)	296, 877
SapI	GCTCTTC	1 cut(s)	1353
SaqAI	TTAA	4 cut(s)	398, 654, 849, 1340
SatI	GCNGC	3 cut(s)	129, 459, 1224
Sau3AI	GATC	6 cut(s)	195, 563, 988, 1084, 1153, 1198
Sau96I	GGNCC	3 cut(s)	119, 120, 782
SchI	GAGTC	3 cut(s)	20, 499, 550
ScrFI	CCNGG	3 cut(s)	123, 411, 789
SduI	GDGCHC	1 cut(s)	123
SexAI	ACCWGGT	1 cut(s)	787
SfaNI	GCATC	4 cut(s)	520, 869, 913, 1221
SfcI	CTRYAG	1 cut(s)	456
Sfr274I	CTCGAG	1 cut(s)	762
SfuI	TTCGAA	1 cut(s)	751
SinI	GGWCC	1 cut(s)	782
SlaI	CTCGAG	1 cut(s)	762
SmiMI	CAYNNNNRTG	2 cut(s)	296, 877
SmlI	CTYRAG	6 cut(s)	164, 397, 677, 762, 1023, 1364
SmoI	CTYRAG	6 cut(s)	164, 397, 677, 762, 1023, 1364
SphI	GCATGC	1 cut(s)	529
Sse9I	AATT	8 cut(s)	91, 270, 478, 954, 996, 1236, 1296, 1382
SseBI	AGGCCT	1 cut(s)	18
SsiI	CCGC	3 cut(s)	84, 99, 325
SspI	AATATT	1 cut(s)	556
SspMI	CTAG	5 cut(s)	275, 285, 992, 1031, 1095
StuI	AGGCCT	1 cut(s)	18
StyD4I	CCNGG	3 cut(s)	121, 409, 787
StyI	CCWWGG	3 cut(s)	102, 186, 201
TaaI	ACNGT	2 cut(s)	436, 1324
TaiI	ACGT	2 cut(s)	409, 422
TaqI	TCGA	3 cut(s)	24, 751, 763
TaqII	GACCGA	1 cut(s)	124
TasI	AATT	8 cut(s)	91, 270, 478, 954, 996, 1236, 1296, 1382
TatI	WGTACW	1 cut(s)	518
TfiI	GAWTC	3 cut(s)	50, 581, 830
Tru1I	TTAA	4 cut(s)	398, 654, 849, 1340
Tru9I	TTAA	4 cut(s)	398, 654, 849, 1340
TscAI	CASTG	5 cut(s)	303, 325, 748, 873, 1183
TseFI	GTSAC	3 cut(s)	136, 970, 1112
TseI	GCWGC	3 cut(s)	128, 458, 1223
Tsp45I	GTSAC	3 cut(s)	136, 970, 1112
TspDTI	ATGAA	1 cut(s)	615
TspGWI	ACGGA	1 cut(s)	28
TspRI	CASTG	5 cut(s)	303, 325, 748, 873, 1183
Vha464I	CTTAAG	1 cut(s)	397
VpaK11BI	GGWCC	1 cut(s)	782
XapI	RAATTY	3 cut(s)	270, 478, 1382
XceI	RCATGY	1 cut(s)	529
XhoI	CTCGAG	1 cut(s)	762
XmiI	GTMKAC	2 cut(s)	403, 1068
XmnI	GAANNNNTTC	3 cut(s)	646, 1257, 1305
XspI	CTAG	5 cut(s)	275, 285, 992, 1031, 1095
ZraI	GACGTC	1 cut(s)	407

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.