Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0012010

Physical Location & Seq

Genomic Coordinates Reverse (-)

20623480 .. 20626812

Gene Structure 3333 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G151400.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1233 bp

ATGTTTCTCACCAGGCTCTCCCGCCTAAACCCAAACCCATTCCTACTCATTCTCACGCGCCACCTCTCCAACCCCTCGAAACTCCACGACCGCTACTCCTTCAAACCCCCACCCTCCCTTTCCCCAAACACCCAGGGCCAAAACCCGAACCATAATAACCCCAAGAAGAAGCAGAAACCCCAGTATCGCCCGCCATCGTCCCTCGACCGAACGGGTCAGAAGCCGATACATTCGGATTTGCCCTTCGATTTCAGGTACAGCTACACCGAGAGCAGCCCGACGGTGAGGCCCATTGGGCTGCGCGAGCCCAAGTACTCGCCTTTTGGGCCGGGGCGGATTGACCGGGAATGGATCGGGGTGTGTGCGCCGGCTGTGGACCCCAAGGTGAGGTCCGTGGAGGGAGCAGAGGAGGATCCGAAATTGGAAGAGAAGAGGAAGAGGAGGAGACAGAAGGTTCAGGGAGAGCCTCTAACTCCGGCTGAAAGGAAAATATTGGTGGACAAGTGCCAGAGGCCCAAAACCAAGAGGCAAATCAATTTGGGTAGAGATGGTTTAACTCACAATATGCTGAATGATATTCAAAACCATTGGAAACATGATGAAGCAGTGAGGATAAAATGTCTAGGTGTTCCCACCGTTGACATGAAAAATGTTTGCACCCAACTTGAGGACAAAACCTTCGGAAAAATCATCCACAGACATGGTGGTGTACTTGTATTATACAGAGGCAGGAACTATAAACCCAAGAAAAGGCCCGTGATTCCATTAATGTTGTGGAGGCCACATGAACCCGTATATCCCAGGCTGATCAAAACTACAATTGATGGCCTAAGCATTGAGGAAACAAAGGAAATGAGGAAGAGAGGATTAGCTGTCCCTGCTTTAACAAAACTTGCCAAGAATGGTTATTATGGTAGTCTGGTATCCATGGTTAGAGATGCTTTTATCTGCTGTGAGCTGGTTCGGATAGACTGCCAGGGTCTTGAGAAGAGTGATTACAAGAAAATAGGCTGCAAACTCAGGGATCTTGTGCCTTGTATCCTGGTGACATTTGAGAAGGAACAGATTGTGGTTTGGAGAGGGAAGGACTATAAGCCTCTAGAGGATGGATACTTCCTTCCAGATCGAGAACTGTTTGATAATCCAGAAGGGGATTTGGTTTCAGGAAAAGAGGGGTGTGGTAACTCAGATGGCAGCAGTAGCGAAAAGGAATTTGACTCTGGTGAAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000373 GO:0000375 GO:0000377 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0007005 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0008535 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010257 GO:0010467 GO:0016043 GO:0016070 GO:0017004 GO:0022414 GO:0022607 GO:0032501 GO:0032502 GO:0032981 GO:0033108 GO:0033617 GO:0034622 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0065003 GO:0071704 GO:0071840 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CRS1_YhbY

Protein Analysis

411

Amino Acids

47.0

Weight (kDa)

9.45

Isoelectric Point (pI)

42.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012010)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G31010 AT4G31010
fragaria_vesca	FvH4_7g12730
malus_domestica	MD02G1197200.v1.1 MD07G1124100.v1.1
prunus_persica	Prupe.2G151400_v2.0.a1 Prupe.2G151400_v2.0.a1 Prupe.2G151400_v2.0.a1
pyrus_communis	pycom02g16050
rosa_chinensis	RchiOBHm_Chr1g0351741
rosa_laevigata	RLG00000028386
rosa_multiflora	Rmu_sc0001933.1_g000016
rosa_roxburghii	Rroxscaffold_4G00303580
rosa_rugosa	Rorug01G0221100
rosa_samantha	Rh1AG235000 Rh1BG205600 Rh1CG219700 Rh1DG232600
rosa_wichuraiana	Rw1G020460

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	58, 303
AciI	CCGC	4 cut(s)	22, 91, 191, 334
AclWI	GGATC	4 cut(s)	359, 407, 420, 1032
AcsI	RAATTY	1 cut(s)	1211
AfaI	GTAC	3 cut(s)	257, 314, 711
AfiI	CCNNNNNNNGG	3 cut(s)	387, 667, 750
AgsI	TTSAA	2 cut(s)	103, 581
AjnI	CCWGG	5 cut(s)	11, 132, 800, 975, 1041
AluBI	AGCT	3 cut(s)	261, 872, 958
AluI	AGCT	3 cut(s)	261, 872, 958
Alw26I	GTCTC	1 cut(s)	439
AlwI	GGATC	4 cut(s)	359, 407, 420, 1032
AoxI	GGCC	7 cut(s)	136, 287, 326, 512, 752, 779, 826
ApeKI	GCWGC	4 cut(s)	273, 298, 1011, 1194
ApoI	RAATTY	1 cut(s)	1211
ArsI	GACNNNNNNTTYG	2 cut(s)	662, 694
AseI	ATTAAT	1 cut(s)	767
AspLEI	GCGC	3 cut(s)	60, 303, 367
AspS9I	GGNCC	7 cut(s)	136, 288, 326, 376, 390, 513, 753
AsuC2I	CCSGG	2 cut(s)	330, 344
AsuHPI	GGTGA	3 cut(s)	295, 397, 1057
AvaII	GGWCC	2 cut(s)	376, 390
BaeI	ACNNNNGTAYC	2 cut(s)	167, 200
BamHI	GGATCC	1 cut(s)	412
BanII	GRGCYC	1 cut(s)	309
BarI	GAAGNNNNNNTAC	2 cut(s)	980, 1012
BbvI	GCAGC	4 cut(s)	285, 285, 998, 1206
BccI	CCATC	5 cut(s)	202, 542, 818, 1100, 1184
BciT130I	CCWGG	5 cut(s)	13, 134, 802, 977, 1043
BciVI	GTATCC	3 cut(s)	934, 1049, 1103
BclI	TGATCA	1 cut(s)	807
BcnI	CCSGG	2 cut(s)	330, 344
BcoDI	GTCTC	1 cut(s)	439
BfaI	CTAG	2 cut(s)	623, 1100
BfuI	GTATCC	3 cut(s)	934, 1049, 1103
BglI	GCCNNNNNGGC	2 cut(s)	295, 325
BisI	GCNGC	4 cut(s)	274, 299, 1012, 1195
BlsI	GCNGC	4 cut(s)	275, 300, 1013, 1196
BmcAI	AGTACT	1 cut(s)	314
Bme1390I	CCNGG	7 cut(s)	13, 134, 330, 344, 802, 977, 1043
Bme18I	GGWCC	2 cut(s)	376, 390
BmgT120I	GGNCC	7 cut(s)	136, 288, 326, 376, 390, 513, 753
BmiI	GGNNCC	2 cut(s)	378, 414
BmrFI	CCNGG	7 cut(s)	13, 134, 330, 344, 802, 977, 1043
BmrI	ACTGGG	1 cut(s)	175
BmsI	GCATC	1 cut(s)	928
BmuI	ACTGGG	1 cut(s)	175
Bpu10I	CCTNAGC	1 cut(s)	830
BpuEI	CTTGAG	2 cut(s)	686, 1004
BpuMI	CCSGG	2 cut(s)	330, 344
BsaJI	CCNNGG	8 cut(s)	132, 133, 329, 381, 393, 800, 927, 976
BsaXI	ACNNNNNCTCC	2 cut(s)	80, 110
Bsc4I	CCNNNNNNNGG	3 cut(s)	387, 667, 750
Bse118I	RCCGGY	1 cut(s)	367
Bse1I	ACTGG	1 cut(s)	181
BseBI	CCWGG	5 cut(s)	13, 134, 802, 977, 1043
BseDI	CCNNGG	8 cut(s)	132, 133, 329, 381, 393, 800, 927, 976
BseGI	GGATG	2 cut(s)	690, 1111
BseLI	CCNNNNNNNGG	3 cut(s)	387, 667, 750
BseMII	CTCAG	2 cut(s)	1033, 1200
BseNI	ACTGG	1 cut(s)	181
BseRI	GAGGAG	3 cut(s)	422, 454, 457
BseXI	GCAGC	4 cut(s)	285, 285, 998, 1206
Bsh1236I	CGCG	2 cut(s)	58, 303
Bsh1285I	CGRYCG	2 cut(s)	91, 208
BshFI	GGCC	7 cut(s)	138, 289, 328, 514, 754, 781, 828
BsiEI	CGRYCG	2 cut(s)	91, 208
BsiSI	CCGG	4 cut(s)	329, 343, 368, 476
BslFI	GGGAC	2 cut(s)	184, 860
BslI	CCNNNNNNNGG	3 cut(s)	387, 667, 750
BsmAI	GTCTC	1 cut(s)	439
BsmFI	GGGAC	2 cut(s)	184, 860
BsnI	GGCC	7 cut(s)	138, 289, 328, 514, 754, 781, 828
Bsp1286I	GDGCHC	1 cut(s)	309
Bsp143I	GATC	5 cut(s)	351, 412, 807, 1024, 1123
Bsp19I	CCATGG	1 cut(s)	927
BspACI	CCGC	4 cut(s)	22, 91, 191, 334
BspANI	GGCC	7 cut(s)	138, 289, 328, 514, 754, 781, 828
BspCNI	CTCAG	2 cut(s)	1032, 1199
BspFNI	CGCG	2 cut(s)	58, 303
BspLI	GGNNCC	2 cut(s)	378, 414
BspPI	GGATC	4 cut(s)	359, 407, 420, 1032
BsrFI	RCCGGY	1 cut(s)	367
BsrI	ACTGG	1 cut(s)	181
BssAI	RCCGGY	1 cut(s)	367
BssECI	CCNNGG	8 cut(s)	132, 133, 329, 381, 393, 800, 927, 976
BssMI	GATC	5 cut(s)	351, 412, 807, 1024, 1123
BssT1I	CCWWGG	2 cut(s)	381, 927
Bst2UI	CCWGG	5 cut(s)	13, 134, 802, 977, 1043
Bst4CI	ACNGT	3 cut(s)	283, 637, 1134
Bst6I	CTCTTC	6 cut(s)	420, 425, 431, 854, 983, 1221
BstC8I	GCNNGC	3 cut(s)	191, 305, 369
BstDEI	CTNAG	3 cut(s)	830, 1019, 1186
BstDSI	CCRYGG	2 cut(s)	393, 927
BstF5I	GGATG	2 cut(s)	690, 1111
BstFNI	CGCG	2 cut(s)	58, 303
BstHHI	GCGC	3 cut(s)	60, 303, 367
BstKTI	GATC	5 cut(s)	354, 415, 810, 1027, 1126
BstMAI	GTCTC	1 cut(s)	439
BstMBI	GATC	5 cut(s)	351, 412, 807, 1024, 1123
BstMCI	CGRYCG	2 cut(s)	91, 208
BstMWI	GCNNNNNNNGC	5 cut(s)	295, 304, 325, 878, 1200
BstNI	CCWGG	5 cut(s)	13, 134, 802, 977, 1043
BstSCI	CCNGG	7 cut(s)	11, 132, 328, 342, 800, 975, 1041
BstUI	CGCG	2 cut(s)	58, 303
BstV1I	GCAGC	4 cut(s)	285, 285, 998, 1206
BstX2I	RGATCY	2 cut(s)	412, 1024
BstXI	CCANNNNNNTGG	1 cut(s)	701
BstYI	RGATCY	2 cut(s)	412, 1024
BsuI	GTATCC	3 cut(s)	934, 1049, 1103
BsuRI	GGCC	7 cut(s)	138, 289, 328, 514, 754, 781, 828
BtgI	CCRYGG	2 cut(s)	393, 927
BtsCI	GGATG	2 cut(s)	690, 1111
BtsI	GCAGTG	1 cut(s)	612
BtsIMutI	CAGTG	1 cut(s)	612
Cac8I	GCNNGC	3 cut(s)	191, 305, 369
CfoI	GCGC	3 cut(s)	60, 303, 367
Cfr10I	RCCGGY	1 cut(s)	367
Cfr13I	GGNCC	7 cut(s)	136, 288, 326, 376, 390, 513, 753
Csp6I	GTAC	3 cut(s)	256, 313, 710
CviAII	CATG	5 cut(s)	596, 643, 701, 785, 928
CviQI	GTAC	3 cut(s)	256, 313, 710
DdeI	CTNAG	3 cut(s)	830, 1019, 1186
DpnI	GATC	5 cut(s)	353, 414, 809, 1026, 1125
DpnII	GATC	5 cut(s)	351, 412, 807, 1024, 1123
Eam1104I	CTCTTC	6 cut(s)	420, 425, 431, 854, 983, 1221
EarI	CTCTTC	6 cut(s)	420, 425, 431, 854, 983, 1221
EciI	GGCGGA	1 cut(s)	349
Eco130I	CCWWGG	2 cut(s)	381, 927
Eco24I	GRGCYC	1 cut(s)	309
Eco47I	GGWCC	2 cut(s)	376, 390
EcoRII	CCWGG	5 cut(s)	11, 132, 800, 975, 1041
EcoT14I	CCWWGG	2 cut(s)	381, 927
EcoT38I	GRGCYC	1 cut(s)	309
ErhI	CCWWGG	2 cut(s)	381, 927
FaeI	CATG	5 cut(s)	599, 646, 704, 788, 931
FaqI	GGGAC	2 cut(s)	184, 860
FatI	CATG	5 cut(s)	595, 642, 700, 784, 927
FauI	CCCGC	2 cut(s)	29, 198
FbaI	TGATCA	1 cut(s)	807
Fnu4HI	GCNGC	4 cut(s)	274, 299, 1012, 1195
FokI	GGATG	2 cut(s)	677, 1118
FriOI	GRGCYC	1 cut(s)	309
Fsp4HI	GCNGC	4 cut(s)	274, 299, 1012, 1195
FspBI	CTAG	2 cut(s)	623, 1100
GlaI	GCGC	3 cut(s)	59, 302, 366
GluI	GCNGC	4 cut(s)	274, 299, 1012, 1195
HaeIII	GGCC	7 cut(s)	138, 289, 328, 514, 754, 781, 828
HapII	CCGG	4 cut(s)	329, 343, 368, 476
HhaI	GCGC	3 cut(s)	60, 303, 367
Hin1II	CATG	5 cut(s)	599, 646, 704, 788, 931
Hin6I	GCGC	3 cut(s)	58, 301, 365
HinP1I	GCGC	3 cut(s)	58, 301, 365
HincII	GTYRAC	1 cut(s)	640
HindII	GTYRAC	1 cut(s)	640
HinfI	GANTC	2 cut(s)	760, 1217
HpaII	CCGG	4 cut(s)	329, 343, 368, 476
HphI	GGTGA	3 cut(s)	295, 397, 1057
Hpy166II	GTNNAC	4 cut(s)	376, 499, 640, 710
Hpy188I	TCNGA	6 cut(s)	219, 235, 417, 683, 966, 1189
Hpy188III	TCNNGA	6 cut(s)	983, 1100, 1121, 1127, 1145, 1164
Hpy8I	GTNNAC	4 cut(s)	376, 499, 640, 710
Hpy99I	CGWCG	1 cut(s)	283
HpyAV	CCTTC	8 cut(s)	109, 253, 445, 688, 1051, 1078, 1127, 1142
HpyCH4III	ACNGT	3 cut(s)	283, 637, 1134
HpyCH4V	TGCA	2 cut(s)	657, 1014
HpyF10VI	GCNNNNNNNGC	5 cut(s)	295, 304, 325, 878, 1200
HpyF3I	CTNAG	3 cut(s)	830, 1019, 1186
Hsp92II	CATG	5 cut(s)	599, 646, 704, 788, 931
HspAI	GCGC	3 cut(s)	58, 301, 365
KroI	GCCGGC	1 cut(s)	367
KroNI	GCCGGC	1 cut(s)	369
Ksp22I	TGATCA	1 cut(s)	807
Kzo9I	GATC	5 cut(s)	351, 412, 807, 1024, 1123
LmnI	GCTCC	1 cut(s)	401
Lsp1109I	GCAGC	4 cut(s)	285, 285, 998, 1206
LweI	GCATC	1 cut(s)	928
MaeI	CTAG	2 cut(s)	623, 1100
MaeIII	GTNAC	2 cut(s)	1045, 1181
MalI	GATC	5 cut(s)	353, 414, 809, 1026, 1125
MboI	GATC	5 cut(s)	351, 412, 807, 1024, 1123
MboII	GAAGA	6 cut(s)	178, 437, 442, 448, 871, 1000
MfeI	CAATTG	1 cut(s)	819
MflI	RGATCY	2 cut(s)	412, 1024
MhlI	GDGCHC	1 cut(s)	309
MluCI	AATT	4 cut(s)	419, 535, 819, 1211
MlyI	GAGTC	1 cut(s)	1211
MmeI	TCCRAC	1 cut(s)	93
MroNI	GCCGGC	1 cut(s)	367
MseI	TTAA	3 cut(s)	554, 767, 884
MslI	CAYNNNNRTG	2 cut(s)	699, 705
MspI	CCGG	4 cut(s)	329, 343, 368, 476
MspR9I	CCNGG	7 cut(s)	13, 134, 330, 344, 802, 977, 1043
MunI	CAATTG	1 cut(s)	819
MvaI	CCWGG	5 cut(s)	13, 134, 802, 977, 1043
MvnI	CGCG	2 cut(s)	58, 303
MwoI	GCNNNNNNNGC	5 cut(s)	295, 304, 325, 878, 1200
NaeI	GCCGGC	1 cut(s)	369
NciI	CCSGG	2 cut(s)	330, 344
NcoI	CCATGG	1 cut(s)	927
NdeII	GATC	5 cut(s)	351, 412, 807, 1024, 1123
NgoMIV	GCCGGC	1 cut(s)	367
NlaIII	CATG	5 cut(s)	599, 646, 704, 788, 931
NlaIV	GGNNCC	2 cut(s)	378, 414
NmuCI	GTSAC	1 cut(s)	1045
PasI	CCCWGGG	1 cut(s)	133
PdiI	GCCGGC	1 cut(s)	369
PfeI	GAWTC	1 cut(s)	760
PkrI	GCNGC	4 cut(s)	275, 300, 1013, 1196
PleI	GAGTC	1 cut(s)	1211
PpsI	GAGTC	1 cut(s)	1211
PshBI	ATTAAT	1 cut(s)	767
Psp6I	CCWGG	5 cut(s)	11, 132, 800, 975, 1041
PspGI	CCWGG	5 cut(s)	11, 132, 800, 975, 1041
PspN4I	GGNNCC	2 cut(s)	378, 414
PspPI	GGNCC	7 cut(s)	136, 288, 326, 376, 390, 513, 753
PsuI	RGATCY	2 cut(s)	412, 1024
RsaI	GTAC	3 cut(s)	257, 314, 711
RsaNI	GTAC	3 cut(s)	256, 313, 710
RseI	CAYNNNNRTG	2 cut(s)	699, 705
SaqAI	TTAA	3 cut(s)	554, 767, 884
SatI	GCNGC	4 cut(s)	274, 299, 1012, 1195
Sau3AI	GATC	5 cut(s)	351, 412, 807, 1024, 1123
Sau96I	GGNCC	7 cut(s)	136, 288, 326, 376, 390, 513, 753
ScaI	AGTACT	1 cut(s)	314
SchI	GAGTC	1 cut(s)	1211
ScrFI	CCNGG	7 cut(s)	13, 134, 330, 344, 802, 977, 1043
SduI	GDGCHC	1 cut(s)	309
SfaNI	GCATC	1 cut(s)	928
SinI	GGWCC	2 cut(s)	376, 390
SmiMI	CAYNNNNRTG	2 cut(s)	699, 705
SmlI	CTYRAG	2 cut(s)	665, 983
SmoI	CTYRAG	2 cut(s)	665, 983
Sse9I	AATT	4 cut(s)	419, 535, 819, 1211
SsiI	CCGC	4 cut(s)	22, 91, 191, 334
SspI	AATATT	1 cut(s)	492
SspMI	CTAG	2 cut(s)	623, 1100
StyD4I	CCNGG	7 cut(s)	11, 132, 328, 342, 800, 975, 1041
StyI	CCWWGG	2 cut(s)	381, 927
TaaI	ACNGT	3 cut(s)	283, 637, 1134
TaqI	TCGA	4 cut(s)	77, 204, 246, 1126
TaqII	GACCGA	1 cut(s)	222
TasI	AATT	4 cut(s)	419, 535, 819, 1211
TatI	WGTACW	2 cut(s)	312, 709
TfiI	GAWTC	1 cut(s)	760
Tru1I	TTAA	3 cut(s)	554, 767, 884
Tru9I	TTAA	3 cut(s)	554, 767, 884
TscAI	CASTG	1 cut(s)	612
TseFI	GTSAC	1 cut(s)	1045
TseI	GCWGC	4 cut(s)	273, 298, 1011, 1194
Tsp45I	GTSAC	1 cut(s)	1045
TspDTI	ATGAA	3 cut(s)	615, 659, 801
TspGWI	ACGGA	1 cut(s)	382
TspRI	CASTG	1 cut(s)	612
VpaK11BI	GGWCC	2 cut(s)	376, 390
VspI	ATTAAT	1 cut(s)	767
XapI	RAATTY	1 cut(s)	1211
XbaI	TCTAGA	1 cut(s)	1099
XcmI	CCANNNNNNNNNTGG	2 cut(s)	701, 771
XspI	CTAG	2 cut(s)	623, 1100
ZrmI	AGTACT	1 cut(s)	314

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.