Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0014940

Physical Location & Seq

Genomic Coordinates Reverse (-)

22635793 .. 22638724

Gene Structure 2932 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G185100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1077 bp

ATGGAGAAGAGGAAGAACATGGAGTGGGAGCAAAAGACTCTAACCAGTGAGCTAACCCAAGGGAAGGAGCTGGCAAAGCAGCTTATGAACTATCTTCACCCTTCTGCATCCCAAGAAAAAAGAGACTTTCTGATTTCAAAAATACTATTTTCCTATGAAAAGGCACTCTCACTGCTCAAAACGGATGTTGGTTCTGATGGAGAGTCTAACCACATCCCTAACACCATGTTGGAATCACCTACTTCATTTGGCAATGGCAGCCCAATGAGTGAGATCTCTGACCAAGATTGCAAGAACAAAAATGTCTTCAAGAAAAGGAAAACAATGCCCAGGTGGACTGAAGAAGTGAAGGTTTTCTCTGGAACAGGGCTAGATGGGAGTCTTGATGATGGCTACAGTTGGAGAAAATATGGCCAAAAGGATATCCTTGGAGCTACCTATCCAAGAGGCTACTACAGATGCACACATCGTGGCACGCAGGGTTGTTTAGCCACCAAGCAAGTCCAAAAGGCAGATGCAGACCCATCAACCATGGTGGTAACCTACAGAGGAGAACATACTTGTAGCCAAGTCCTTCAGTTAGCCAGGTCATCAGCATTATCCCTAGCTAAACAAGCTTCAACAGGAAATCAAAATGCAACCCGAGAAGCAGAAAAACCAGAAGCATCACAAGAGATGTCTTTCGGTTTTGGGGCAGGGCTTAGAGTTAAAACTGAGGATTTGGACACAAGGGAAGATGATATATTTCCATCATTTTCCTTCCCTTCTACACCAATTGAACCTGAAAATGTCGGAGACCATATTTTCTGTGCAACTTTGATGGATGGCTATTCTCCCACATTTGCATCTCCAGCAGCAACATTTGAACCAGACTACTTGCAGGCAGTGTCACCGTGCCAAATGAGCAGTTTCGGACTTGGCCTTGATTATGTGCAGACTTCAGAATCTGGTCTCAGTGAGATCATCTCAGCCCCAACTTCAGTGACCAACTCACCAATTGGGGATTTTGGTTTCTCACTTGATGATTTGGATTTTCACCATTTTGAAAACTCAGAAAGTTTTGCTTACGAGTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000976 GO:0000987 GO:0001067 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0010033 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0042221 GO:0042493 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043565 GO:0044212 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0048364 GO:0048527 GO:0048528 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0070013 GO:0080090 GO:0090696 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:1990837 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

WRKY

Protein Analysis

359

Amino Acids

39.64

Weight (kDa)

4.98

Isoelectric Point (pI)

46.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014940)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46400
fragaria_vesca	FvH4_7g16150
malus_domestica	MD01G1078000.v1.1 MD07G1146900.v1.1
prunus_persica	Prupe.2G185100_v2.0.a1
pyrus_communis	pycom07g14630
rosa_chinensis	RchiOBHm_Chr1g0359091
rosa_laevigata	RLG00000027900
rosa_multiflora	Rmu_sc0020948.1_g000005
rosa_roxburghii	Rroxscaffold_4G00297350
rosa_rugosa	Rorug01G0267800
rosa_samantha	Rh1AG281300 Rh1BG248200 Rh1CG265800 Rh1DG276700
rosa_wichuraiana	Rw1G025020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AcoI	YGGCCR	1 cut(s)	412
AcuI	CTGAAG	4 cut(s)	360, 560, 924, 963
AdeI	CACNNNGTG	1 cut(s)	470
AfiI	CCNNNNNNNGG	1 cut(s)	64
AgsI	TTSAA	6 cut(s)	138, 310, 621, 779, 866, 1046
AjnI	CCWGG	2 cut(s)	329, 584
AluBI	AGCT	6 cut(s)	52, 70, 82, 434, 608, 617
AluI	AGCT	6 cut(s)	52, 70, 82, 434, 608, 617
Alw26I	GTCTC	3 cut(s)	117, 789, 956
AlwNI	CAGNNNCTG	1 cut(s)	947
Ama87I	CYCGRG	1 cut(s)	642
AoxI	GGCC	2 cut(s)	412, 919
ApeKI	GCWGC	3 cut(s)	79, 258, 854
Asp700I	GAANNNNTTC	1 cut(s)	353
AsuHPI	GGTGA	5 cut(s)	89, 228, 882, 984, 1028
AvaI	CYCGRG	1 cut(s)	642
BalI	TGGCCA	1 cut(s)	414
BbsI	GAAGAC	1 cut(s)	298
BbvI	GCAGC	3 cut(s)	91, 270, 866
BccI	CCATC	7 cut(s)	191, 368, 383, 532, 757, 814, 818
BciT130I	CCWGG	2 cut(s)	331, 586
BcoDI	GTCTC	3 cut(s)	117, 789, 956
BfaI	CTAG	2 cut(s)	371, 605
BfmI	CTRYAG	3 cut(s)	394, 454, 544
BglII	AGATCT	1 cut(s)	273
BisI	GCNGC	3 cut(s)	80, 259, 855
BlsI	GCNGC	3 cut(s)	81, 260, 856
Bme1390I	CCNGG	2 cut(s)	331, 586
BmeT110I	CYCGRG	1 cut(s)	642
BmrFI	CCNGG	2 cut(s)	331, 586
BmsI	GCATC	5 cut(s)	116, 449, 505, 674, 854
BpiI	GAAGAC	1 cut(s)	298
BplI	GAGNNNNNCTC	2 cut(s)	950, 982
BpmI	CTGGAG	1 cut(s)	834
BsaI	GGTCTC	2 cut(s)	789, 956
BsaJI	CCNNGG	4 cut(s)	58, 329, 427, 531
Bsc4I	CCNNNNNNNGG	1 cut(s)	64
Bse1I	ACTGG	1 cut(s)	45
Bse3DI	GCAATG	1 cut(s)	259
BseBI	CCWGG	2 cut(s)	331, 586
BseDI	CCNNGG	4 cut(s)	58, 329, 427, 531
BseGI	GGATG	4 cut(s)	107, 190, 213, 829
BseLI	CCNNNNNNNGG	1 cut(s)	64
BseMI	GCAATG	1 cut(s)	259
BseMII	CTCAG	4 cut(s)	705, 967, 981, 1065
BseNI	ACTGG	1 cut(s)	45
BseRI	GAGGAG	1 cut(s)	564
BseXI	GCAGC	3 cut(s)	91, 270, 866
BsgI	GTGCAG	1 cut(s)	953
BshFI	GGCC	2 cut(s)	414, 921
BsiHKCI	CYCGRG	1 cut(s)	642
BslI	CCNNNNNNNGG	1 cut(s)	64
BsmAI	GTCTC	3 cut(s)	117, 789, 956
BsnI	GGCC	2 cut(s)	414, 921
Bso31I	GGTCTC	2 cut(s)	789, 956
BsoBI	CYCGRG	1 cut(s)	642
Bsp143I	GATC	2 cut(s)	273, 960
Bsp19I	CCATGG	1 cut(s)	531
BspANI	GGCC	2 cut(s)	414, 921
BspCNI	CTCAG	4 cut(s)	706, 966, 980, 1064
BspTNI	GGTCTC	2 cut(s)	789, 956
BsrDI	GCAATG	1 cut(s)	259
BsrI	ACTGG	1 cut(s)	45
BssECI	CCNNGG	4 cut(s)	58, 329, 427, 531
BssMI	GATC	2 cut(s)	273, 960
BssT1I	CCWWGG	3 cut(s)	58, 427, 531
Bst2UI	CCWGG	2 cut(s)	331, 586
Bst4CI	ACNGT	2 cut(s)	398, 894
Bst6I	CTCTTC	1 cut(s)	2
BstC8I	GCNNGC	3 cut(s)	72, 476, 882
BstDEI	CTNAG	5 cut(s)	701, 714, 953, 967, 1051
BstDSI	CCRYGG	1 cut(s)	531
BstEII	GGTNACC	1 cut(s)	538
BstF5I	GGATG	4 cut(s)	107, 190, 213, 829
BstKTI	GATC	2 cut(s)	276, 963
BstMAI	GTCTC	3 cut(s)	117, 789, 956
BstMBI	GATC	2 cut(s)	273, 960
BstMWI	GCNNNNNNNGC	5 cut(s)	76, 258, 614, 851, 903
BstNI	CCWGG	2 cut(s)	331, 586
BstPI	GGTNACC	1 cut(s)	538
BstSCI	CCNGG	2 cut(s)	329, 584
BstSFI	CTRYAG	3 cut(s)	394, 454, 544
BstV1I	GCAGC	3 cut(s)	91, 270, 866
BstV2I	GAAGAC	1 cut(s)	298
BstX2I	RGATCY	1 cut(s)	273
BstYI	RGATCY	1 cut(s)	273
BsuRI	GGCC	2 cut(s)	414, 921
BtgI	CCRYGG	1 cut(s)	531
BtsCI	GGATG	4 cut(s)	107, 190, 213, 829
BtsI	GCAGTG	2 cut(s)	170, 891
BtsIMutI	CAGTG	5 cut(s)	52, 170, 891, 961, 987
Cac8I	GCNNGC	3 cut(s)	72, 476, 882
CaiI	CAGNNNCTG	1 cut(s)	947
CspCI	CAANNNNNGTGG	2 cut(s)	516, 551
CviAII	CATG	3 cut(s)	19, 226, 532
DdeI	CTNAG	5 cut(s)	701, 714, 953, 967, 1051
DpnI	GATC	2 cut(s)	275, 962
DpnII	GATC	2 cut(s)	273, 960
DraIII	CACNNNGTG	1 cut(s)	470
EaeI	YGGCCR	1 cut(s)	412
Eam1104I	CTCTTC	1 cut(s)	2
EarI	CTCTTC	1 cut(s)	2
Eco130I	CCWWGG	3 cut(s)	58, 427, 531
Eco31I	GGTCTC	2 cut(s)	789, 956
Eco32I	GATATC	1 cut(s)	424
Eco57I	CTGAAG	4 cut(s)	360, 560, 924, 963
Eco88I	CYCGRG	1 cut(s)	642
Eco91I	GGTNACC	1 cut(s)	538
EcoO65I	GGTNACC	1 cut(s)	538
EcoRII	CCWGG	2 cut(s)	329, 584
EcoRV	GATATC	1 cut(s)	424
EcoT14I	CCWWGG	3 cut(s)	58, 427, 531
ErhI	CCWWGG	3 cut(s)	58, 427, 531
FaeI	CATG	3 cut(s)	22, 229, 535
FalI	AAGNNNNNCTT	1 cut(s)	1048
FatI	CATG	3 cut(s)	18, 225, 531
Fnu4HI	GCNGC	3 cut(s)	80, 259, 855
FokI	GGATG	4 cut(s)	94, 197, 200, 836
Fsp4HI	GCNGC	3 cut(s)	80, 259, 855
FspBI	CTAG	2 cut(s)	371, 605
GluI	GCNGC	3 cut(s)	80, 259, 855
GsuI	CTGGAG	1 cut(s)	834
HaeIII	GGCC	2 cut(s)	414, 921
Hin1II	CATG	3 cut(s)	22, 229, 535
HindIII	AAGCTT	1 cut(s)	615
HinfI	GANTC	6 cut(s)	37, 203, 233, 379, 944, 1070
HphI	GGTGA	5 cut(s)	89, 228, 882, 984, 1028
Hpy166II	GTNNAC	1 cut(s)	336
Hpy188I	TCNGA	7 cut(s)	132, 196, 280, 794, 914, 943, 1054
Hpy188III	TCNNGA	3 cut(s)	310, 360, 383
Hpy8I	GTNNAC	1 cut(s)	336
HpyAV	CCTTC	6 cut(s)	58, 111, 343, 584, 769, 774
HpyCH4III	ACNGT	2 cut(s)	398, 894
HpyCH4V	TGCA	9 cut(s)	107, 291, 462, 518, 638, 812, 845, 880, 934
HpyF10VI	GCNNNNNNNGC	5 cut(s)	76, 258, 614, 851, 903
HpyF3I	CTNAG	5 cut(s)	701, 714, 953, 967, 1051
Hsp92II	CATG	3 cut(s)	22, 229, 535
Kzo9I	GATC	2 cut(s)	273, 960
LmnI	GCTCC	3 cut(s)	28, 67, 431
Lsp1109I	GCAGC	3 cut(s)	91, 270, 866
LweI	GCATC	5 cut(s)	116, 449, 505, 674, 854
MaeI	CTAG	2 cut(s)	371, 605
MaeIII	GTNAC	3 cut(s)	538, 888, 982
MalI	GATC	2 cut(s)	275, 962
MboI	GATC	2 cut(s)	273, 960
MboII	GAAGA	6 cut(s)	19, 25, 86, 298, 353, 746
MfeI	CAATTG	2 cut(s)	774, 996
MflI	RGATCY	1 cut(s)	273
MlsI	TGGCCA	1 cut(s)	414
MluCI	AATT	2 cut(s)	774, 996
MluNI	TGGCCA	1 cut(s)	414
MlyI	GAGTC	3 cut(s)	31, 212, 388
MmeI	TCCRAC	3 cut(s)	210, 380, 772
MnlI	CCTC	4 cut(s)	3, 440, 542, 709
Mox20I	TGGCCA	1 cut(s)	414
MroXI	GAANNNNTTC	1 cut(s)	353
MscI	TGGCCA	1 cut(s)	414
MseI	TTAA	1 cut(s)	708
Msp20I	TGGCCA	1 cut(s)	414
MspR9I	CCNGG	2 cut(s)	331, 586
MunI	CAATTG	2 cut(s)	774, 996
MvaI	CCWGG	2 cut(s)	331, 586
MwoI	GCNNNNNNNGC	5 cut(s)	76, 258, 614, 851, 903
NcoI	CCATGG	1 cut(s)	531
NdeII	GATC	2 cut(s)	273, 960
NlaIII	CATG	3 cut(s)	22, 229, 535
NmuCI	GTSAC	2 cut(s)	888, 982
PdmI	GAANNNNTTC	1 cut(s)	353
PfeI	GAWTC	2 cut(s)	233, 944
PkrI	GCNGC	3 cut(s)	81, 260, 856
PleI	GAGTC	3 cut(s)	31, 211, 387
PpsI	GAGTC	3 cut(s)	31, 211, 387
Psp6I	CCWGG	2 cut(s)	329, 584
PspEI	GGTNACC	1 cut(s)	538
PspGI	CCWGG	2 cut(s)	329, 584
PstNI	CAGNNNCTG	1 cut(s)	947
PsuI	RGATCY	1 cut(s)	273
SaqAI	TTAA	1 cut(s)	708
SatI	GCNGC	3 cut(s)	80, 259, 855
Sau3AI	GATC	2 cut(s)	273, 960
SchI	GAGTC	3 cut(s)	31, 212, 388
ScrFI	CCNGG	2 cut(s)	331, 586
SfaNI	GCATC	5 cut(s)	116, 449, 505, 674, 854
SfcI	CTRYAG	3 cut(s)	394, 454, 544
Sse9I	AATT	2 cut(s)	774, 996
SspMI	CTAG	2 cut(s)	371, 605
StyD4I	CCNGG	2 cut(s)	329, 584
StyI	CCWWGG	3 cut(s)	58, 427, 531
TaaI	ACNGT	2 cut(s)	398, 894
TasI	AATT	2 cut(s)	774, 996
TfiI	GAWTC	2 cut(s)	233, 944
Tru1I	TTAA	1 cut(s)	708
Tru9I	TTAA	1 cut(s)	708
TscAI	CASTG	5 cut(s)	52, 177, 891, 961, 987
TseFI	GTSAC	2 cut(s)	888, 982
TseI	GCWGC	3 cut(s)	79, 258, 854
Tsp45I	GTSAC	2 cut(s)	888, 982
TspDTI	ATGAA	3 cut(s)	101, 171, 234
TspGWI	ACGGA	1 cut(s)	197
TspRI	CASTG	5 cut(s)	52, 177, 891, 961, 987
XmnI	GAANNNNTTC	1 cut(s)	353
XspI	CTAG	2 cut(s)	371, 605

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.