transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01380 AT1G01380 AT1G01380 AT2G46410 AT4G01060 AT4G01060 AT4G01060 |
| fragaria_vesca | FvH4_7g16170 |
| malus_domestica | MD07G1147100.v1.1 |
| prunus_persica | Prupe.2G185200_v2.0.a1 |
| pyrus_communis | pycom01g10670 |
| rosa_chinensis | RchiOBHm_Chr1g0359121 |
| rosa_laevigata | RLG00000027899 |
| rosa_multiflora | Rmu_sc0008475.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00297320 |
| rosa_rugosa | Rorug01G0267900 |
| rosa_samantha | Rh1AG281600 Rh1BG248400 Rh1CG265900 Rh1DG277100 |
| rosa_wichuraiana | Rw1G025030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 80 |
| AciI | CCGC | 1 cut(s) | 13 |
| AcuI | CTGAAG | 1 cut(s) | 69 |
| AfaI | GTAC | 1 cut(s) | 122 |
| AflII | CTTAAG | 1 cut(s) | 248 |
| AflIII | ACRYGT | 1 cut(s) | 84 |
| AjnI | CCWGG | 1 cut(s) | 166 |
| AluBI | AGCT | 3 cut(s) | 127, 155, 247 |
| AluI | AGCT | 3 cut(s) | 127, 155, 247 |
| Alw26I | GTCTC | 2 cut(s) | 129, 202 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 39 |
| ApeKI | GCWGC | 1 cut(s) | 60 |
| AsuHPI | GGTGA | 1 cut(s) | 67 |
| BbvI | GCAGC | 1 cut(s) | 72 |
| BciT130I | CCWGG | 1 cut(s) | 168 |
| BcoDI | GTCTC | 2 cut(s) | 129, 202 |
| BfrI | CTTAAG | 1 cut(s) | 248 |
| BglII | AGATCT | 1 cut(s) | 103 |
| BisI | GCNGC | 2 cut(s) | 13, 61 |
| BlsI | GCNGC | 2 cut(s) | 14, 62 |
| Bme1390I | CCNGG | 1 cut(s) | 168 |
| BmrFI | CCNGG | 1 cut(s) | 168 |
| BseBI | CCWGG | 1 cut(s) | 168 |
| BseXI | GCAGC | 1 cut(s) | 72 |
| BseYI | CCCAGC | 1 cut(s) | 155 |
| BsmAI | GTCTC | 2 cut(s) | 129, 202 |
| Bsp1407I | TGTACA | 1 cut(s) | 120 |
| Bsp143I | GATC | 1 cut(s) | 103 |
| BspACI | CCGC | 1 cut(s) | 13 |
| BspTI | CTTAAG | 1 cut(s) | 248 |
| BsrGI | TGTACA | 1 cut(s) | 120 |
| BssMI | GATC | 1 cut(s) | 103 |
| Bst2UI | CCWGG | 1 cut(s) | 168 |
| Bst6I | CTCTTC | 1 cut(s) | 45 |
| BstAFI | CTTAAG | 1 cut(s) | 248 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 42 |
| BstAUI | TGTACA | 1 cut(s) | 120 |
| BstKTI | GATC | 1 cut(s) | 106 |
| BstMAI | GTCTC | 2 cut(s) | 129, 202 |
| BstMBI | GATC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 42 |
| BstNI | CCWGG | 1 cut(s) | 168 |
| BstNSI | RCATGY | 1 cut(s) | 88 |
| BstSCI | CCNGG | 1 cut(s) | 166 |
| BstV1I | GCAGC | 1 cut(s) | 72 |
| BstX2I | RGATCY | 1 cut(s) | 103 |
| BstYI | RGATCY | 1 cut(s) | 103 |
| CaiI | CAGNNNCTG | 1 cut(s) | 39 |
| Csp6I | GTAC | 1 cut(s) | 121 |
| CviAII | CATG | 2 cut(s) | 85, 212 |
| CviJI | RGCY | 4 cut(s) | 26, 127, 155, 247 |
| CviKI_1 | RGCY | 4 cut(s) | 26, 127, 155, 247 |
| CviQI | GTAC | 1 cut(s) | 121 |
| DpnI | GATC | 1 cut(s) | 105 |
| DpnII | GATC | 1 cut(s) | 103 |
| Eam1104I | CTCTTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 1 cut(s) | 45 |
| Eco57I | CTGAAG | 1 cut(s) | 69 |
| EcoRII | CCWGG | 1 cut(s) | 166 |
| FaeI | CATG | 2 cut(s) | 88, 215 |
| FaiI | YATR | 4 cut(s) | 80, 86, 152, 213 |
| FatI | CATG | 2 cut(s) | 84, 211 |
| Fnu4HI | GCNGC | 2 cut(s) | 13, 61 |
| Fsp4HI | GCNGC | 2 cut(s) | 13, 61 |
| GluI | GCNGC | 2 cut(s) | 13, 61 |
| GsaI | CCCAGC | 1 cut(s) | 159 |
| Hin1II | CATG | 2 cut(s) | 88, 215 |
| HinfI | GANTC | 1 cut(s) | 163 |
| HphI | GGTGA | 1 cut(s) | 67 |
| Hpy188I | TCNGA | 3 cut(s) | 49, 91, 134 |
| Hpy188III | TCNNGA | 1 cut(s) | 276 |
| Hpy99I | CGWCG | 1 cut(s) | 134 |
| HpyCH4V | TGCA | 2 cut(s) | 114, 227 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 42 |
| Hsp92II | CATG | 2 cut(s) | 88, 215 |
| Kzo9I | GATC | 1 cut(s) | 103 |
| LpnPI | CCDG | 8 cut(s) | 46, 52, 124, 141, 153, 157, 180, 184 |
| Lsp1109I | GCAGC | 1 cut(s) | 72 |
| MaeIII | GTNAC | 1 cut(s) | 254 |
| MalI | GATC | 1 cut(s) | 105 |
| MboI | GATC | 1 cut(s) | 103 |
| MboII | GAAGA | 6 cut(s) | 62, 110, 113, 194, 246, 249 |
| MflI | RGATCY | 1 cut(s) | 103 |
| MmeI | TCCRAC | 1 cut(s) | 112 |
| MnlI | CCTC | 3 cut(s) | 46, 153, 186 |
| MseI | TTAA | 2 cut(s) | 203, 249 |
| MspCI | CTTAAG | 1 cut(s) | 248 |
| MspR9I | CCNGG | 1 cut(s) | 168 |
| MvaI | CCWGG | 1 cut(s) | 168 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 42 |
| NdeII | GATC | 1 cut(s) | 103 |
| NlaIII | CATG | 2 cut(s) | 88, 215 |
| NspI | RCATGY | 1 cut(s) | 88 |
| PciI | ACATGT | 1 cut(s) | 84 |
| PfeI | GAWTC | 1 cut(s) | 163 |
| PkrI | GCNGC | 2 cut(s) | 14, 62 |
| PscI | ACATGT | 1 cut(s) | 84 |
| PsiI | TTATAA | 1 cut(s) | 80 |
| Psp6I | CCWGG | 1 cut(s) | 166 |
| PspFI | CCCAGC | 1 cut(s) | 155 |
| PspGI | CCWGG | 1 cut(s) | 166 |
| PstNI | CAGNNNCTG | 1 cut(s) | 39 |
| PsuI | RGATCY | 1 cut(s) | 103 |
| RsaI | GTAC | 1 cut(s) | 122 |
| RsaNI | GTAC | 1 cut(s) | 121 |
| SaqAI | TTAA | 2 cut(s) | 203, 249 |
| SatI | GCNGC | 2 cut(s) | 13, 61 |
| Sau3AI | GATC | 1 cut(s) | 103 |
| ScrFI | CCNGG | 1 cut(s) | 168 |
| SetI | ASST | 7 cut(s) | 41, 57, 129, 143, 157, 197, 249 |
| SmlI | CTYRAG | 1 cut(s) | 248 |
| SmoI | CTYRAG | 1 cut(s) | 248 |
| SsiI | CCGC | 1 cut(s) | 13 |
| StyD4I | CCNGG | 1 cut(s) | 166 |
| TatI | WGTACW | 1 cut(s) | 120 |
| TauI | GCSGC | 1 cut(s) | 15 |
| TfiI | GAWTC | 1 cut(s) | 163 |
| Tru1I | TTAA | 2 cut(s) | 203, 249 |
| Tru9I | TTAA | 2 cut(s) | 203, 249 |
| TseI | GCWGC | 1 cut(s) | 60 |
| Vha464I | CTTAAG | 1 cut(s) | 248 |
| XceI | RCATGY | 1 cut(s) | 88 |