transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G01380 AT1G01380 AT1G01380 AT2G46410 AT4G01060 AT4G01060 AT4G01060 |
| fragaria_vesca | FvH4_7g16170 |
| malus_domestica | MD07G1147100.v1.1 |
| prunus_persica | Prupe.2G185200_v2.0.a1 |
| pyrus_communis | pycom01g10670 |
| rosa_chinensis | RchiOBHm_Chr1g0359121 |
| rosa_laevigata | RLG00000027899 |
| rosa_multiflora | Rmu_sc0008475.1_g000001 |
| rosa_roxburghii | Rroxscaffold_4G00297320 |
| rosa_rugosa | Rorug01G0267900 |
| rosa_samantha | Rh1AG281600 Rh1BG248400 Rh1CG265900 Rh1DG277100 |
| rosa_wichuraiana | Rw1G025030 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 9 |
| AccI | GTMKAC | 1 cut(s) | 278 |
| AcyI | GRCGYC | 1 cut(s) | 6 |
| AfaI | GTAC | 1 cut(s) | 233 |
| AluBI | AGCT | 1 cut(s) | 250 |
| AluI | AGCT | 1 cut(s) | 250 |
| Alw26I | GTCTC | 1 cut(s) | 178 |
| AoxI | GGCC | 1 cut(s) | 145 |
| ApeKI | GCWGC | 2 cut(s) | 39, 247 |
| AspS9I | GGNCC | 1 cut(s) | 145 |
| AsuC2I | CCSGG | 2 cut(s) | 133, 144 |
| BbvI | GCAGC | 2 cut(s) | 51, 259 |
| BccI | CCATC | 1 cut(s) | 76 |
| BcnI | CCSGG | 2 cut(s) | 133, 144 |
| BcoDI | GTCTC | 1 cut(s) | 178 |
| BfaI | CTAG | 1 cut(s) | 36 |
| BisI | GCNGC | 2 cut(s) | 40, 248 |
| BlsI | GCNGC | 2 cut(s) | 41, 249 |
| Bme1390I | CCNGG | 2 cut(s) | 133, 144 |
| BmgT120I | GGNCC | 1 cut(s) | 145 |
| BmrFI | CCNGG | 2 cut(s) | 133, 144 |
| Bpu10I | CCTNAGC | 1 cut(s) | 113 |
| BpuMI | CCSGG | 2 cut(s) | 133, 144 |
| BsaHI | GRCGYC | 1 cut(s) | 6 |
| BseMII | CTCAG | 1 cut(s) | 127 |
| BseXI | GCAGC | 2 cut(s) | 51, 259 |
| BseYI | CCCAGC | 1 cut(s) | 243 |
| BshFI | GGCC | 1 cut(s) | 147 |
| BsiSI | CCGG | 4 cut(s) | 16, 132, 143, 148 |
| BslFI | GGGAC | 1 cut(s) | 135 |
| BsmAI | GTCTC | 1 cut(s) | 178 |
| BsmFI | GGGAC | 1 cut(s) | 135 |
| BsnI | GGCC | 1 cut(s) | 147 |
| BspANI | GGCC | 1 cut(s) | 147 |
| BspCNI | CTCAG | 1 cut(s) | 126 |
| BssNI | GRCGYC | 1 cut(s) | 6 |
| BstACI | GRCGYC | 1 cut(s) | 6 |
| BstDEI | CTNAG | 2 cut(s) | 113, 282 |
| BstMAI | GTCTC | 1 cut(s) | 178 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 244 |
| BstSCI | CCNGG | 2 cut(s) | 131, 142 |
| BstV1I | GCAGC | 2 cut(s) | 51, 259 |
| BsuRI | GGCC | 1 cut(s) | 147 |
| Cfr13I | GGNCC | 1 cut(s) | 145 |
| Csp6I | GTAC | 1 cut(s) | 232 |
| CviAII | CATG | 1 cut(s) | 268 |
| CviJI | RGCY | 6 cut(s) | 29, 112, 131, 139, 147, 250 |
| CviKI_1 | RGCY | 6 cut(s) | 29, 112, 131, 139, 147, 250 |
| CviQI | GTAC | 1 cut(s) | 232 |
| DdeI | CTNAG | 2 cut(s) | 113, 282 |
| FaeI | CATG | 1 cut(s) | 271 |
| FaiI | YATR | 2 cut(s) | 128, 269 |
| FaqI | GGGAC | 1 cut(s) | 135 |
| FatI | CATG | 1 cut(s) | 267 |
| FblI | GTMKAC | 1 cut(s) | 278 |
| Fnu4HI | GCNGC | 2 cut(s) | 40, 248 |
| Fsp4HI | GCNGC | 2 cut(s) | 40, 248 |
| FspBI | CTAG | 1 cut(s) | 36 |
| GluI | GCNGC | 2 cut(s) | 40, 248 |
| GsaI | CCCAGC | 1 cut(s) | 247 |
| HaeIII | GGCC | 1 cut(s) | 147 |
| HapII | CCGG | 4 cut(s) | 16, 132, 143, 148 |
| Hin1I | GRCGYC | 1 cut(s) | 6 |
| Hin1II | CATG | 1 cut(s) | 271 |
| HpaII | CCGG | 4 cut(s) | 16, 132, 143, 148 |
| Hpy166II | GTNNAC | 1 cut(s) | 279 |
| Hpy188I | TCNGA | 1 cut(s) | 55 |
| Hpy188III | TCNNGA | 1 cut(s) | 306 |
| Hpy8I | GTNNAC | 1 cut(s) | 279 |
| HpyAV | CCTTC | 2 cut(s) | 50, 58 |
| HpyCH4IV | ACGT | 1 cut(s) | 6 |
| HpyCH4V | TGCA | 1 cut(s) | 203 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 244 |
| HpyF3I | CTNAG | 2 cut(s) | 113, 282 |
| HpySE526I | ACGT | 1 cut(s) | 6 |
| Hsp92I | GRCGYC | 1 cut(s) | 6 |
| Hsp92II | CATG | 1 cut(s) | 271 |
| Lsp1109I | GCAGC | 2 cut(s) | 51, 259 |
| MaeI | CTAG | 1 cut(s) | 36 |
| MaeII | ACGT | 1 cut(s) | 6 |
| MboII | GAAGA | 3 cut(s) | 170, 222, 225 |
| MluCI | AATT | 1 cut(s) | 301 |
| MnlI | CCTC | 2 cut(s) | 129, 162 |
| MseI | TTAA | 2 cut(s) | 179, 252 |
| MspI | CCGG | 4 cut(s) | 16, 132, 143, 148 |
| MspR9I | CCNGG | 2 cut(s) | 133, 144 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 244 |
| NciI | CCSGG | 2 cut(s) | 133, 144 |
| NlaIII | CATG | 1 cut(s) | 271 |
| PkrI | GCNGC | 2 cut(s) | 41, 249 |
| PspFI | CCCAGC | 1 cut(s) | 243 |
| PspPI | GGNCC | 1 cut(s) | 145 |
| RsaI | GTAC | 1 cut(s) | 233 |
| RsaNI | GTAC | 1 cut(s) | 232 |
| SaqAI | TTAA | 2 cut(s) | 179, 252 |
| SatI | GCNGC | 2 cut(s) | 40, 248 |
| Sau96I | GGNCC | 1 cut(s) | 145 |
| ScrFI | CCNGG | 2 cut(s) | 133, 144 |
| SetI | ASST | 4 cut(s) | 9, 119, 173, 252 |
| Sse9I | AATT | 1 cut(s) | 301 |
| SspMI | CTAG | 1 cut(s) | 36 |
| StyD4I | CCNGG | 2 cut(s) | 131, 142 |
| TaiI | ACGT | 1 cut(s) | 9 |
| TasI | AATT | 1 cut(s) | 301 |
| Tru1I | TTAA | 2 cut(s) | 179, 252 |
| Tru9I | TTAA | 2 cut(s) | 179, 252 |
| TseI | GCWGC | 2 cut(s) | 39, 247 |
| TspDTI | ATGAA | 1 cut(s) | 284 |
| TspGWI | ACGGA | 1 cut(s) | 204 |
| XmiI | GTMKAC | 1 cut(s) | 278 |
| XspI | CTAG | 1 cut(s) | 36 |
| ZraI | GACGTC | 1 cut(s) | 7 |