Auxin-induced protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G00880 |
| fragaria_vesca | FvH4_7g32600 |
| malus_domestica | MD00G1036600.v1.1 MD01G1227100.v1.1 MD07G1156400.v1.1 MD07G1297400.v1.1 |
| prunus_persica | Prupe.2G194600_v2.0.a1 Prupe.2G317100_v2.0.a1 |
| pyrus_communis | pycom01g11040 pycom01g23520 pycom07g15310 pycom07g26980 |
| rosa_chinensis | RchiOBHm_Chr1g0382491 |
| rosa_laevigata | RLG00000026176 |
| rosa_multiflora | Rmu_sc0000110.1_g000052 Rmu_sc0003696.1_g000003 Rmu_sc0003696.1_g000017 |
| rosa_roxburghii | Rroxscaffold_4G00278010 |
| rosa_wichuraiana | Rw1G041170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 51 |
| Acc36I | ACCTGC | 1 cut(s) | 51 |
| AccB1I | GGYRCC | 2 cut(s) | 172, 254 |
| AclWI | GGATC | 1 cut(s) | 110 |
| AcsI | RAATTY | 1 cut(s) | 28 |
| AcvI | CACGTG | 1 cut(s) | 277 |
| AfaI | GTAC | 1 cut(s) | 293 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 280 |
| AgsI | TTSAA | 2 cut(s) | 190, 217 |
| AjnI | CCWGG | 1 cut(s) | 144 |
| AluBI | AGCT | 1 cut(s) | 211 |
| AluI | AGCT | 1 cut(s) | 211 |
| AlwI | GGATC | 1 cut(s) | 110 |
| AoxI | GGCC | 1 cut(s) | 142 |
| ApeKI | GCWGC | 1 cut(s) | 157 |
| ApoI | RAATTY | 1 cut(s) | 28 |
| AspS9I | GGNCC | 1 cut(s) | 142 |
| AsuHPI | GGTGA | 8 cut(s) | 41, 47, 53, 62, 161, 185, 253, 329 |
| BaeGI | GKGCMC | 1 cut(s) | 257 |
| BanI | GGYRCC | 2 cut(s) | 172, 254 |
| BbrPI | CACGTG | 1 cut(s) | 277 |
| BbvCI | CCTCAGC | 1 cut(s) | 225 |
| BbvI | GCAGC | 1 cut(s) | 169 |
| BccI | CCATC | 5 cut(s) | 42, 72, 266, 272, 360 |
| BciT130I | CCWGG | 1 cut(s) | 146 |
| BclI | TGATCA | 1 cut(s) | 244 |
| BfuAI | ACCTGC | 1 cut(s) | 51 |
| BisI | GCNGC | 1 cut(s) | 158 |
| BlsI | GCNGC | 1 cut(s) | 159 |
| Bme1390I | CCNGG | 1 cut(s) | 146 |
| BmgT120I | GGNCC | 1 cut(s) | 142 |
| BmiI | GGNNCC | 2 cut(s) | 174, 256 |
| BmrFI | CCNGG | 1 cut(s) | 146 |
| Bpu10I | CCTNAGC | 1 cut(s) | 225 |
| BsaAI | YACGTR | 1 cut(s) | 277 |
| BsaJI | CCNNGG | 2 cut(s) | 145, 298 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 275, 305 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 280 |
| BseBI | CCWGG | 1 cut(s) | 146 |
| BseDI | CCNNGG | 2 cut(s) | 145, 298 |
| BseGI | GGATG | 1 cut(s) | 264 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 280 |
| BseMII | CTCAG | 1 cut(s) | 216 |
| BseRI | GAGGAG | 1 cut(s) | 296 |
| BseSI | GKGCMC | 1 cut(s) | 257 |
| BseXI | GCAGC | 1 cut(s) | 169 |
| BsgI | GTGCAG | 1 cut(s) | 23 |
| BshFI | GGCC | 1 cut(s) | 144 |
| BshNI | GGYRCC | 2 cut(s) | 172, 254 |
| BslFI | GGGAC | 1 cut(s) | 307 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 280 |
| BsmFI | GGGAC | 1 cut(s) | 307 |
| BsnI | GGCC | 1 cut(s) | 144 |
| Bsp1286I | GDGCHC | 1 cut(s) | 257 |
| Bsp143I | GATC | 2 cut(s) | 102, 244 |
| BspANI | GGCC | 1 cut(s) | 144 |
| BspCNI | CTCAG | 1 cut(s) | 217 |
| BspLI | GGNNCC | 2 cut(s) | 174, 256 |
| BspMI | ACCTGC | 1 cut(s) | 51 |
| BspPI | GGATC | 1 cut(s) | 110 |
| BspQI | GCTCTTC | 2 cut(s) | 11, 147 |
| BspT107I | GGYRCC | 2 cut(s) | 172, 254 |
| BssECI | CCNNGG | 2 cut(s) | 145, 298 |
| BssMI | GATC | 2 cut(s) | 102, 244 |
| BssT1I | CCWWGG | 1 cut(s) | 298 |
| Bst2UI | CCWGG | 1 cut(s) | 146 |
| Bst4CI | ACNGT | 1 cut(s) | 201 |
| Bst6I | CTCTTC | 3 cut(s) | 11, 147, 225 |
| BstBAI | YACGTR | 1 cut(s) | 277 |
| BstDEI | CTNAG | 2 cut(s) | 23, 225 |
| BstF5I | GGATG | 1 cut(s) | 264 |
| BstKTI | GATC | 2 cut(s) | 105, 247 |
| BstMBI | GATC | 2 cut(s) | 102, 244 |
| BstNI | CCWGG | 1 cut(s) | 146 |
| BstSCI | CCNGG | 1 cut(s) | 144 |
| BstSLI | GKGCMC | 1 cut(s) | 257 |
| BstV1I | GCAGC | 1 cut(s) | 169 |
| BsuRI | GGCC | 1 cut(s) | 144 |
| BtsCI | GGATG | 1 cut(s) | 264 |
| BtsI | GCAGTG | 1 cut(s) | 13 |
| BtsIMutI | CAGTG | 2 cut(s) | 13, 197 |
| BveI | ACCTGC | 1 cut(s) | 51 |
| Cfr13I | GGNCC | 1 cut(s) | 142 |
| Csp6I | GTAC | 1 cut(s) | 292 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 120, 155 |
| CviAII | CATG | 3 cut(s) | 83, 304, 356 |
| CviJI | RGCY | 5 cut(s) | 21, 144, 211, 224, 240 |
| CviKI_1 | RGCY | 5 cut(s) | 21, 144, 211, 224, 240 |
| CviQI | GTAC | 1 cut(s) | 292 |
| DdeI | CTNAG | 2 cut(s) | 23, 225 |
| DpnI | GATC | 2 cut(s) | 104, 246 |
| DpnII | GATC | 2 cut(s) | 102, 244 |
| Eam1104I | CTCTTC | 3 cut(s) | 11, 147, 225 |
| EarI | CTCTTC | 3 cut(s) | 11, 147, 225 |
| Eco130I | CCWWGG | 1 cut(s) | 298 |
| Eco72I | CACGTG | 1 cut(s) | 277 |
| EcoRII | CCWGG | 1 cut(s) | 144 |
| EcoT14I | CCWWGG | 1 cut(s) | 298 |
| ErhI | CCWWGG | 1 cut(s) | 298 |
| FaeI | CATG | 3 cut(s) | 86, 307, 359 |
| FaiI | YATR | 5 cut(s) | 75, 84, 237, 305, 357 |
| FaqI | GGGAC | 1 cut(s) | 307 |
| FatI | CATG | 3 cut(s) | 82, 303, 355 |
| FbaI | TGATCA | 1 cut(s) | 244 |
| Fnu4HI | GCNGC | 1 cut(s) | 158 |
| FokI | GGATG | 1 cut(s) | 251 |
| Fsp4HI | GCNGC | 1 cut(s) | 158 |
| GluI | GCNGC | 1 cut(s) | 158 |
| HaeIII | GGCC | 1 cut(s) | 144 |
| Hin1II | CATG | 3 cut(s) | 86, 307, 359 |
| HphI | GGTGA | 8 cut(s) | 41, 47, 53, 62, 161, 185, 253, 329 |
| Hpy188I | TCNGA | 2 cut(s) | 107, 249 |
| Hpy188III | TCNNGA | 1 cut(s) | 214 |
| HpyAV | CCTTC | 4 cut(s) | 62, 68, 211, 244 |
| HpyCH4III | ACNGT | 1 cut(s) | 201 |
| HpyCH4IV | ACGT | 2 cut(s) | 276, 294 |
| HpyCH4V | TGCA | 1 cut(s) | 40 |
| HpyF3I | CTNAG | 2 cut(s) | 23, 225 |
| HpySE526I | ACGT | 2 cut(s) | 276, 294 |
| Hsp92II | CATG | 3 cut(s) | 86, 307, 359 |
| Ksp22I | TGATCA | 1 cut(s) | 244 |
| Kzo9I | GATC | 2 cut(s) | 102, 244 |
| LguI | GCTCTTC | 2 cut(s) | 11, 147 |
| LpnPI | CCDG | 5 cut(s) | 56, 131, 158, 189, 298 |
| Lsp1109I | GCAGC | 1 cut(s) | 169 |
| MaeII | ACGT | 2 cut(s) | 276, 294 |
| MalI | GATC | 2 cut(s) | 104, 246 |
| MboI | GATC | 2 cut(s) | 102, 244 |
| MboII | GAAGA | 4 cut(s) | 28, 103, 164, 242 |
| MhlI | GDGCHC | 1 cut(s) | 257 |
| MluCI | AATT | 1 cut(s) | 28 |
| MnlI | CCTC | 6 cut(s) | 57, 214, 220, 274, 335, 345 |
| MslI | CAYNNNNRTG | 2 cut(s) | 84, 354 |
| MspR9I | CCNGG | 1 cut(s) | 146 |
| MvaI | CCWGG | 1 cut(s) | 146 |
| NdeII | GATC | 2 cut(s) | 102, 244 |
| NlaIII | CATG | 3 cut(s) | 86, 307, 359 |
| NlaIV | GGNNCC | 2 cut(s) | 174, 256 |
| PaqCI | CACCTGC | 1 cut(s) | 51 |
| PciSI | GCTCTTC | 2 cut(s) | 11, 147 |
| PkrI | GCNGC | 1 cut(s) | 159 |
| PmaCI | CACGTG | 1 cut(s) | 277 |
| PmlI | CACGTG | 1 cut(s) | 277 |
| Ppu21I | YACGTR | 1 cut(s) | 277 |
| Psp6I | CCWGG | 1 cut(s) | 144 |
| PspCI | CACGTG | 1 cut(s) | 277 |
| PspGI | CCWGG | 1 cut(s) | 144 |
| PspN4I | GGNNCC | 2 cut(s) | 174, 256 |
| PspPI | GGNCC | 1 cut(s) | 142 |
| RsaI | GTAC | 1 cut(s) | 293 |
| RsaNI | GTAC | 1 cut(s) | 292 |
| RseI | CAYNNNNRTG | 2 cut(s) | 84, 354 |
| SapI | GCTCTTC | 2 cut(s) | 11, 147 |
| SatI | GCNGC | 1 cut(s) | 158 |
| Sau3AI | GATC | 2 cut(s) | 102, 244 |
| Sau96I | GGNCC | 1 cut(s) | 142 |
| ScrFI | CCNGG | 1 cut(s) | 146 |
| SduI | GDGCHC | 1 cut(s) | 257 |
| SetI | ASST | 8 cut(s) | 45, 54, 60, 141, 213, 279, 293, 297 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 84, 354 |
| Sse9I | AATT | 1 cut(s) | 28 |
| StyD4I | CCNGG | 1 cut(s) | 144 |
| StyI | CCWWGG | 1 cut(s) | 298 |
| TaaI | ACNGT | 1 cut(s) | 201 |
| TaiI | ACGT | 2 cut(s) | 279, 297 |
| TasI | AATT | 1 cut(s) | 28 |
| TscAI | CASTG | 2 cut(s) | 13, 204 |
| TseI | GCWGC | 1 cut(s) | 157 |
| TspDTI | ATGAA | 1 cut(s) | 193 |
| TspRI | CASTG | 2 cut(s) | 13, 204 |
| XapI | RAATTY | 1 cut(s) | 28 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 80, 359 |