mediator of RNA polymerase II transcription subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G02850 |
| fragaria_vesca | FvH4_7g16920 FvH4_7g16920 FvH4_7g16920 FvH4_7g16920 FvH4_7g17650 FvH4_7g17650 FvH4_7g17650 |
| prunus_persica | Prupe.2G197600_v2.0.a1 Prupe.2G197600_v2.0.a1 Prupe.2G197600_v2.0.a1 |
| pyrus_communis | pycom01g11270 |
| rosa_chinensis | RchiOBHm_Chr1g0360161 RchiOBHm_Chr1g0361081 |
| rosa_laevigata | RLG00000027749 RLG00000027825 |
| rosa_multiflora | Rmu_sc0003333.1_g000008 Rmu_sc0007813.1_g000004 Rmu_ssc0000368.1_g000045 |
| rosa_roxburghii | Rroxscaffold_4G00295440 Rroxscaffold_4G00296330 |
| rosa_rugosa | Rorug01G0275400 Rorug01G0275500 Rorug01G0285400 Rorug01G0285500 |
| rosa_samantha | Rh1AG289200 Rh1AG296800 Rh1BG254900 Rh1BG261100 Rh1CG272200 Rh1CG278400 Rh1DG284300 Rh1DG291100 |
| rosa_wichuraiana | Rw0G002900 Rw1G025660 Rw1G026220 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 481 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 674 |
| AccI | GTMKAC | 1 cut(s) | 889 |
| AccII | CGCG | 2 cut(s) | 429, 835 |
| AccIII | TCCGGA | 1 cut(s) | 1126 |
| AciI | CCGC | 5 cut(s) | 294, 436, 532, 710, 833 |
| AclWI | GGATC | 3 cut(s) | 213, 322, 1024 |
| AcsI | RAATTY | 3 cut(s) | 390, 610, 671 |
| AcuI | CTGAAG | 1 cut(s) | 386 |
| AfaI | GTAC | 2 cut(s) | 21, 960 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 33, 674, 698, 872, 974, 1013 |
| AgsI | TTSAA | 4 cut(s) | 71, 203, 353, 610 |
| AjnI | CCWGG | 5 cut(s) | 882, 928, 973, 985, 1031 |
| AluBI | AGCT | 9 cut(s) | 32, 415, 648, 689, 748, 871, 1028, 1117, 1173 |
| AluI | AGCT | 9 cut(s) | 32, 415, 648, 689, 748, 871, 1028, 1117, 1173 |
| Alw21I | GWGCWC | 1 cut(s) | 880 |
| Alw26I | GTCTC | 2 cut(s) | 116, 211 |
| Alw44I | GTGCAC | 1 cut(s) | 876 |
| AlwI | GGATC | 3 cut(s) | 213, 322, 1024 |
| Aor13HI | TCCGGA | 1 cut(s) | 1126 |
| AoxI | GGCC | 4 cut(s) | 40, 177, 828, 1055 |
| ApaLI | GTGCAC | 1 cut(s) | 876 |
| ApeKI | GCWGC | 3 cut(s) | 4, 100, 449 |
| ApoI | RAATTY | 3 cut(s) | 390, 610, 671 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 810 |
| AspS9I | GGNCC | 4 cut(s) | 438, 829, 991, 1129 |
| AsuHPI | GGTGA | 1 cut(s) | 51 |
| AvaII | GGWCC | 3 cut(s) | 438, 991, 1129 |
| BaeGI | GKGCMC | 3 cut(s) | 706, 880, 969 |
| BanII | GRGCYC | 1 cut(s) | 157 |
| Bbv12I | GWGCWC | 1 cut(s) | 880 |
| BbvI | GCAGC | 2 cut(s) | 112, 436 |
| BccI | CCATC | 2 cut(s) | 551, 972 |
| BceAI | ACGGC | 1 cut(s) | 1070 |
| BciT130I | CCWGG | 5 cut(s) | 884, 930, 975, 987, 1033 |
| BciVI | GTATCC | 1 cut(s) | 918 |
| BcoDI | GTCTC | 2 cut(s) | 116, 211 |
| BfaI | CTAG | 4 cut(s) | 33, 150, 951, 1158 |
| BfuAI | ACCTGC | 1 cut(s) | 481 |
| BfuI | GTATCC | 1 cut(s) | 918 |
| BisI | GCNGC | 4 cut(s) | 5, 101, 450, 532 |
| BlpI | GCTNAGC | 1 cut(s) | 411 |
| BlsI | GCNGC | 4 cut(s) | 6, 102, 451, 533 |
| Bme1390I | CCNGG | 5 cut(s) | 884, 930, 975, 987, 1033 |
| Bme18I | GGWCC | 3 cut(s) | 438, 991, 1129 |
| BmgT120I | GGNCC | 4 cut(s) | 438, 829, 991, 1129 |
| BmiI | GGNNCC | 3 cut(s) | 831, 992, 993 |
| BmrFI | CCNGG | 5 cut(s) | 884, 930, 975, 987, 1033 |
| BmrI | ACTGGG | 3 cut(s) | 102, 331, 989 |
| BmsI | GCATC | 4 cut(s) | 436, 608, 924, 1156 |
| BmuI | ACTGGG | 3 cut(s) | 102, 331, 989 |
| BpmI | CTGGAG | 2 cut(s) | 866, 1008 |
| Bpu10I | CCTNAGC | 1 cut(s) | 840 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 411 |
| BpuEI | CTTGAG | 1 cut(s) | 461 |
| Bsa29I | ATCGAT | 1 cut(s) | 217 |
| BsaJI | CCNNGG | 7 cut(s) | 241, 441, 883, 929, 986, 1031, 1032 |
| BsaWI | WCCGGW | 2 cut(s) | 639, 1126 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 33, 674, 698, 872, 974, 1013 |
| Bse1I | ACTGG | 3 cut(s) | 108, 337, 995 |
| BseAI | TCCGGA | 1 cut(s) | 1126 |
| BseBI | CCWGG | 5 cut(s) | 884, 930, 975, 987, 1033 |
| BseCI | ATCGAT | 1 cut(s) | 217 |
| BseDI | CCNNGG | 7 cut(s) | 241, 441, 883, 929, 986, 1031, 1032 |
| BseGI | GGATG | 7 cut(s) | 168, 451, 487, 562, 730, 939, 983 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 33, 674, 698, 872, 974, 1013 |
| BseMII | CTCAG | 4 cut(s) | 617, 758, 831, 1188 |
| BseNI | ACTGG | 3 cut(s) | 108, 337, 995 |
| BseRI | GAGGAG | 3 cut(s) | 125, 681, 815 |
| BseSI | GKGCMC | 3 cut(s) | 706, 880, 969 |
| BseXI | GCAGC | 2 cut(s) | 112, 436 |
| BseYI | CCCAGC | 2 cut(s) | 28, 871 |
| BsgI | GTGCAG | 2 cut(s) | 435, 582 |
| Bsh1236I | CGCG | 2 cut(s) | 429, 835 |
| BshFI | GGCC | 4 cut(s) | 42, 179, 830, 1057 |
| BshVI | ATCGAT | 1 cut(s) | 217 |
| BsiHKAI | GWGCWC | 1 cut(s) | 880 |
| BsiSI | CCGG | 2 cut(s) | 640, 1127 |
| BslFI | GGGAC | 2 cut(s) | 319, 1004 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 33, 674, 698, 872, 974, 1013 |
| BsmAI | GTCTC | 2 cut(s) | 116, 211 |
| BsmFI | GGGAC | 2 cut(s) | 319, 1004 |
| BsmI | GAATGC | 1 cut(s) | 236 |
| BsnI | GGCC | 4 cut(s) | 42, 179, 830, 1057 |
| Bsp1286I | GDGCHC | 4 cut(s) | 157, 706, 880, 969 |
| Bsp13I | TCCGGA | 1 cut(s) | 1126 |
| Bsp1407I | TGTACA | 1 cut(s) | 19 |
| Bsp143I | GATC | 4 cut(s) | 218, 327, 397, 1016 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 411 |
| BspACI | CCGC | 5 cut(s) | 294, 436, 532, 710, 833 |
| BspANI | GGCC | 4 cut(s) | 42, 179, 830, 1057 |
| BspCNI | CTCAG | 4 cut(s) | 616, 757, 832, 1187 |
| BspDI | ATCGAT | 1 cut(s) | 217 |
| BspEI | TCCGGA | 1 cut(s) | 1126 |
| BspFNI | CGCG | 2 cut(s) | 429, 835 |
| BspLI | GGNNCC | 3 cut(s) | 831, 992, 993 |
| BspMI | ACCTGC | 1 cut(s) | 481 |
| BspPI | GGATC | 3 cut(s) | 213, 322, 1024 |
| BspQI | GCTCTTC | 1 cut(s) | 1035 |
| BsrGI | TGTACA | 1 cut(s) | 19 |
| BsrI | ACTGG | 3 cut(s) | 108, 337, 995 |
| BssECI | CCNNGG | 7 cut(s) | 241, 441, 883, 929, 986, 1031, 1032 |
| BssMI | GATC | 4 cut(s) | 218, 327, 397, 1016 |
| BssT1I | CCWWGG | 1 cut(s) | 441 |
| Bst2UI | CCWGG | 5 cut(s) | 884, 930, 975, 987, 1033 |
| Bst4CI | ACNGT | 3 cut(s) | 595, 790, 910 |
| Bst6I | CTCTTC | 4 cut(s) | 72, 310, 699, 1035 |
| BstAUI | TGTACA | 1 cut(s) | 19 |
| BstC8I | GCNNGC | 4 cut(s) | 427, 714, 738, 1171 |
| BstDEI | CTNAG | 6 cut(s) | 411, 603, 744, 783, 840, 1174 |
| BstDSI | CCRYGG | 1 cut(s) | 241 |
| BstF5I | GGATG | 7 cut(s) | 168, 451, 487, 562, 730, 939, 983 |
| BstFNI | CGCG | 2 cut(s) | 429, 835 |
| BstKTI | GATC | 4 cut(s) | 221, 330, 400, 1019 |
| BstMAI | GTCTC | 2 cut(s) | 116, 211 |
| BstMBI | GATC | 4 cut(s) | 218, 327, 397, 1016 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 185, 686, 841, 1114 |
| BstNI | CCWGG | 5 cut(s) | 884, 930, 975, 987, 1033 |
| BstNSI | RCATGY | 1 cut(s) | 1112 |
| BstSCI | CCNGG | 5 cut(s) | 882, 928, 973, 985, 1031 |
| BstSLI | GKGCMC | 3 cut(s) | 706, 880, 969 |
| BstUI | CGCG | 2 cut(s) | 429, 835 |
| BstV1I | GCAGC | 2 cut(s) | 112, 436 |
| BstX2I | RGATCY | 2 cut(s) | 327, 1016 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 978 |
| BstYI | RGATCY | 2 cut(s) | 327, 1016 |
| Bsu15I | ATCGAT | 1 cut(s) | 217 |
| BsuI | GTATCC | 1 cut(s) | 918 |
| BsuRI | GGCC | 4 cut(s) | 42, 179, 830, 1057 |
| BsuTUI | ATCGAT | 1 cut(s) | 217 |
| BtgI | CCRYGG | 1 cut(s) | 241 |
| BtgZI | GCGATG | 2 cut(s) | 969, 1176 |
| BtsCI | GGATG | 7 cut(s) | 168, 451, 487, 562, 730, 939, 983 |
| BtsI | GCAGTG | 2 cut(s) | 281, 342 |
| BtsIMutI | CAGTG | 4 cut(s) | 281, 342, 591, 1002 |
| BveI | ACCTGC | 1 cut(s) | 481 |
| Cac8I | GCNNGC | 4 cut(s) | 427, 714, 738, 1171 |
| Cfr13I | GGNCC | 4 cut(s) | 438, 829, 991, 1129 |
| ClaI | ATCGAT | 1 cut(s) | 217 |
| CseI | GACGC | 2 cut(s) | 416, 824 |
| Csp6I | GTAC | 2 cut(s) | 20, 959 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 577, 612 |
| CviAII | CATG | 2 cut(s) | 579, 1109 |
| CviQI | GTAC | 2 cut(s) | 20, 959 |
| DdeI | CTNAG | 6 cut(s) | 411, 603, 744, 783, 840, 1174 |
| DpnI | GATC | 4 cut(s) | 220, 329, 399, 1018 |
| DpnII | GATC | 4 cut(s) | 218, 327, 397, 1016 |
| Eam1104I | CTCTTC | 4 cut(s) | 72, 310, 699, 1035 |
| EarI | CTCTTC | 4 cut(s) | 72, 310, 699, 1035 |
| Eco130I | CCWWGG | 1 cut(s) | 441 |
| Eco147I | AGGCCT | 1 cut(s) | 42 |
| Eco24I | GRGCYC | 1 cut(s) | 157 |
| Eco47I | GGWCC | 3 cut(s) | 438, 991, 1129 |
| Eco57I | CTGAAG | 1 cut(s) | 386 |
| EcoO109I | RGGNCCY | 2 cut(s) | 829, 991 |
| EcoRII | CCWGG | 5 cut(s) | 882, 928, 973, 985, 1031 |
| EcoT14I | CCWWGG | 1 cut(s) | 441 |
| EcoT22I | ATGCAT | 1 cut(s) | 238 |
| EcoT38I | GRGCYC | 1 cut(s) | 157 |
| ErhI | CCWWGG | 1 cut(s) | 441 |
| FaeI | CATG | 2 cut(s) | 582, 1112 |
| FaiI | YATR | 6 cut(s) | 580, 631, 633, 751, 1110, 1155 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 378, 410, 678, 710 |
| FaqI | GGGAC | 2 cut(s) | 319, 1004 |
| FatI | CATG | 2 cut(s) | 578, 1108 |
| FauI | CCCGC | 2 cut(s) | 717, 840 |
| FauNDI | CATATG | 1 cut(s) | 631 |
| FblI | GTMKAC | 1 cut(s) | 889 |
| Fnu4HI | GCNGC | 4 cut(s) | 5, 101, 450, 532 |
| FokI | GGATG | 7 cut(s) | 155, 458, 494, 569, 737, 946, 990 |
| FriOI | GRGCYC | 1 cut(s) | 157 |
| Fsp4HI | GCNGC | 4 cut(s) | 5, 101, 450, 532 |
| FspBI | CTAG | 4 cut(s) | 33, 150, 951, 1158 |
| GluI | GCNGC | 4 cut(s) | 5, 101, 450, 532 |
| GsaI | CCCAGC | 2 cut(s) | 32, 875 |
| GsuI | CTGGAG | 2 cut(s) | 866, 1008 |
| HaeIII | GGCC | 4 cut(s) | 42, 179, 830, 1057 |
| HapII | CCGG | 2 cut(s) | 640, 1127 |
| HgaI | GACGC | 2 cut(s) | 416, 824 |
| Hin1II | CATG | 2 cut(s) | 582, 1112 |
| HinfI | GANTC | 3 cut(s) | 214, 302, 572 |
| HpaII | CCGG | 2 cut(s) | 640, 1127 |
| HphI | GGTGA | 1 cut(s) | 51 |
| Hpy166II | GTNNAC | 4 cut(s) | 342, 779, 878, 890 |
| Hpy188I | TCNGA | 5 cut(s) | 87, 255, 523, 619, 1177 |
| Hpy188III | TCNNGA | 6 cut(s) | 395, 404, 497, 793, 839, 1127 |
| Hpy8I | GTNNAC | 4 cut(s) | 342, 779, 878, 890 |
| HpyAV | CCTTC | 5 cut(s) | 105, 134, 173, 321, 359 |
| HpyCH4III | ACNGT | 3 cut(s) | 595, 790, 910 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 185, 686, 841, 1114 |
| HpyF3I | CTNAG | 6 cut(s) | 411, 603, 744, 783, 840, 1174 |
| Hsp92II | CATG | 2 cut(s) | 582, 1112 |
| KflI | GGGWCCC | 1 cut(s) | 991 |
| Kpn2I | TCCGGA | 1 cut(s) | 1126 |
| Kzo9I | GATC | 4 cut(s) | 218, 327, 397, 1016 |
| LguI | GCTCTTC | 1 cut(s) | 1035 |
| LmnI | GCTCC | 3 cut(s) | 694, 1027, 1033 |
| Lsp1109I | GCAGC | 2 cut(s) | 112, 436 |
| LweI | GCATC | 4 cut(s) | 436, 608, 924, 1156 |
| MaeI | CTAG | 4 cut(s) | 33, 150, 951, 1158 |
| MalI | GATC | 4 cut(s) | 220, 329, 399, 1018 |
| MboI | GATC | 4 cut(s) | 218, 327, 397, 1016 |
| MboII | GAAGA | 9 cut(s) | 59, 258, 297, 392, 567, 578, 686, 1052, 1190 |
| MflI | RGATCY | 2 cut(s) | 327, 1016 |
| MhlI | GDGCHC | 4 cut(s) | 157, 706, 880, 969 |
| MluCI | AATT | 8 cut(s) | 15, 390, 420, 610, 671, 754, 810, 1049 |
| MlyI | GAGTC | 1 cut(s) | 296 |
| MmeI | TCCRAC | 2 cut(s) | 278, 902 |
| Mph1103I | ATGCAT | 1 cut(s) | 238 |
| MroI | TCCGGA | 1 cut(s) | 1126 |
| MroXI | GAANNNNTTC | 1 cut(s) | 810 |
| MslI | CAYNNNNRTG | 2 cut(s) | 173, 976 |
| MspA1I | CMGCKG | 1 cut(s) | 1117 |
| MspI | CCGG | 2 cut(s) | 640, 1127 |
| MspR9I | CCNGG | 5 cut(s) | 884, 930, 975, 987, 1033 |
| Mva1269I | GAATGC | 1 cut(s) | 236 |
| MvaI | CCWGG | 5 cut(s) | 884, 930, 975, 987, 1033 |
| MvnI | CGCG | 2 cut(s) | 429, 835 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 185, 686, 841, 1114 |
| NdeI | CATATG | 1 cut(s) | 631 |
| NdeII | GATC | 4 cut(s) | 218, 327, 397, 1016 |
| NlaIII | CATG | 2 cut(s) | 582, 1112 |
| NlaIV | GGNNCC | 3 cut(s) | 831, 992, 993 |
| NsiI | ATGCAT | 1 cut(s) | 238 |
| NspI | RCATGY | 1 cut(s) | 1112 |
| PasI | CCCWGGG | 1 cut(s) | 1032 |
| PceI | AGGCCT | 1 cut(s) | 42 |
| PciSI | GCTCTTC | 1 cut(s) | 1035 |
| PctI | GAATGC | 1 cut(s) | 236 |
| PdmI | GAANNNNTTC | 1 cut(s) | 810 |
| PfeI | GAWTC | 2 cut(s) | 214, 572 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 674 |
| PkrI | GCNGC | 4 cut(s) | 6, 102, 451, 533 |
| PleI | GAGTC | 1 cut(s) | 296 |
| PpsI | GAGTC | 1 cut(s) | 296 |
| PpuMI | RGGWCCY | 1 cut(s) | 991 |
| Psp5II | RGGWCCY | 1 cut(s) | 991 |
| Psp6I | CCWGG | 5 cut(s) | 882, 928, 973, 985, 1031 |
| PspFI | CCCAGC | 2 cut(s) | 28, 871 |
| PspGI | CCWGG | 5 cut(s) | 882, 928, 973, 985, 1031 |
| PspN4I | GGNNCC | 3 cut(s) | 831, 992, 993 |
| PspPI | GGNCC | 4 cut(s) | 438, 829, 991, 1129 |
| PspPPI | RGGWCCY | 1 cut(s) | 991 |
| PsuI | RGATCY | 2 cut(s) | 327, 1016 |
| PvuII | CAGCTG | 1 cut(s) | 1117 |
| RsaI | GTAC | 2 cut(s) | 21, 960 |
| RsaNI | GTAC | 2 cut(s) | 20, 959 |
| RseI | CAYNNNNRTG | 2 cut(s) | 173, 976 |
| SapI | GCTCTTC | 1 cut(s) | 1035 |
| SatI | GCNGC | 4 cut(s) | 5, 101, 450, 532 |
| Sau3AI | GATC | 4 cut(s) | 218, 327, 397, 1016 |
| Sau96I | GGNCC | 4 cut(s) | 438, 829, 991, 1129 |
| SchI | GAGTC | 1 cut(s) | 296 |
| ScrFI | CCNGG | 5 cut(s) | 884, 930, 975, 987, 1033 |
| SduI | GDGCHC | 4 cut(s) | 157, 706, 880, 969 |
| SfaNI | GCATC | 4 cut(s) | 436, 608, 924, 1156 |
| SinI | GGWCC | 3 cut(s) | 438, 991, 1129 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 173, 976 |
| SmlI | CTYRAG | 1 cut(s) | 476 |
| SmoI | CTYRAG | 1 cut(s) | 476 |
| Sse9I | AATT | 8 cut(s) | 15, 390, 420, 610, 671, 754, 810, 1049 |
| SseBI | AGGCCT | 1 cut(s) | 42 |
| SsiI | CCGC | 5 cut(s) | 294, 436, 532, 710, 833 |
| SspI | AATATT | 1 cut(s) | 822 |
| SspMI | CTAG | 4 cut(s) | 33, 150, 951, 1158 |
| StuI | AGGCCT | 1 cut(s) | 42 |
| StyD4I | CCNGG | 5 cut(s) | 882, 928, 973, 985, 1031 |
| StyI | CCWWGG | 1 cut(s) | 441 |
| TaaI | ACNGT | 3 cut(s) | 595, 790, 910 |
| TaqI | TCGA | 4 cut(s) | 217, 486, 792, 1038 |
| TasI | AATT | 8 cut(s) | 15, 390, 420, 610, 671, 754, 810, 1049 |
| TatI | WGTACW | 1 cut(s) | 19 |
| TauI | GCSGC | 1 cut(s) | 534 |
| TfiI | GAWTC | 2 cut(s) | 214, 572 |
| TscAI | CASTG | 4 cut(s) | 288, 349, 598, 1002 |
| TseI | GCWGC | 3 cut(s) | 4, 100, 449 |
| TspDTI | ATGAA | 1 cut(s) | 567 |
| TspGWI | ACGGA | 3 cut(s) | 230, 556, 903 |
| TspRI | CASTG | 4 cut(s) | 288, 349, 598, 1002 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 674 |
| VneI | GTGCAC | 1 cut(s) | 876 |
| VpaK11BI | GGWCC | 3 cut(s) | 438, 991, 1129 |
| XapI | RAATTY | 3 cut(s) | 390, 610, 671 |
| XceI | RCATGY | 1 cut(s) | 1112 |
| XmiI | GTMKAC | 1 cut(s) | 889 |
| XmnI | GAANNNNTTC | 1 cut(s) | 810 |
| XspI | CTAG | 4 cut(s) | 33, 150, 951, 1158 |
| Zsp2I | ATGCAT | 1 cut(s) | 238 |