Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0003446

Physical Location & Seq

Genomic Coordinates Forward (+)

40009888 .. 40015392

Gene Structure 5505 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0285400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1806 bp

ATGGCTATCGGCAGTGTCATATCCAACCGGAATTTCGGTTCTTTTATCGGCTCAGGAAGAGTATTTCAAACCAACCATGCTGTTGTTCATAATAAAAGAGACAGTCTACAACTTCAGGGGAAAATGTTCTACCAAACTTTATGTACTCCAAGGGCCAATGGTTCTATATCTAGAAACTCATATAACCCTTACCTGGGTGCCAGTTTTTCTTCAGATGCAAACACACGGTTGTTGCATGATGAAGGCAACCGGCGTTATGTAATGTCTCTACAATCTGGTATAAGGTGCCAGAGCATCGTTACCAAGCAAAGAACTATAGGAAGATGCGAAGGCTATCTTTCTTCAAATCACTCTTTCAAAAGTTTCAATCAATCAAGGAAGCTGGATAAGCTTGATAACTGGCAATACCAGAAGTCTGAGAGTGTTAAAGTTAACAGGATCCGTGCTGATTACAAGCCGGAGGATATTGACATAACCGAAACAGAGGTGGACTCATTGACAGGATCAGGTGAAGCTGTTTTGGCAGATGGAAAGGTGCCTAAAGTATCCACCTGGTGGGAGATTCCTAAACGATGGGTGATTGTGCTCCTTTGTTTTACAGCATTTCTATTGTGCAACATGGATCGTGTGAATATGAGCATTGCAATACTTCCCATGTCCAAGGAATTTAACTGGAATAGTGCAACAGTTGGCTTGATTCAGTCCTCTTTTTTCTGGGGCTACCTACTTACTCAGATTCTTGGAGGCATATGGGCAGATAAAATTGGCGGGAAGCGTGTATTGGGTTTTGGAGTGATCTGGTGGTCAGTGGCGACAGTTTTGACACCTATTGCTGCAAAAATCAGTCTTCCTTTCTTGCTTGTTATGCGTGCTTTTATGGGGATTGGTGAGGGTGTTGCTATGCCTGCTATGAATAATATGCTCTCTAAGTGGATTCCAGTGTCAGAGAGAAGCAGAGCACTTTCACTAGTATATAGTGGCATGTATCTTGGTTCGGTCACTGGGTTGGCCGTTTCTCCCATTCTAATCCAGAAATTTAAATGGCCCTCTGTGTTTTACTCATTTGGCTCTCTTGGCAGCATCTGGTTTGCATTATGGCTGAGCAAAGCATATAGCACACCAAAAGAAGATCCAGAGCTTAGTGCAGAGGAAAAAGAGCTCATCCTAGGTGGCAATGTATCTAAGGAATGTGTTACTGTCATTCCTTGGAAACTAATTTTATCAAAACCAGCTGTATGGGCTCTTATAGTCTCCCACTTTTGCCATAATTGGGGAACCTTTATTCTGTTGACATGGATGCCTACATACTACAATCAGGTTTTGAAGTTCAACCTCACTGAATCCGGGCTCCTCTGTGTCTTGCCATGGTTGACCATGGCTGTATTTGCAAATATAGGGGGTTGGATTGCAGATACACTTGTCAGCAGAGGTTATTCTGTCACGACAGTTCGTAAGATCATGCAATCAATTGGGTTTCTGGGACCAGCCTTTTTCCTTACTCTGCTGAGCCGTGTCAAGACACCTGCTATGGCAGTATTATGCATGGCATGCAGTCAGGGAGCTGATGCATTCTCACAATCTGGCCTCTATTCAAATCACCAAGACATTGGACCTCGCTATAGTGGAGTATTGCTGGGGCTGTCTAACACAGCAGGAGTTCTTGCTGGTGTCTTTGGTACAGCAGCAACCGGGTACATACTCCAGCGAGGTTCTTGGGATGATGTATTCAAGGTGGCTGTTGTATTGTACCTCATAGGCACAGTAGTTTGGAACTTATTTTCCACCGGAGAGAAAGTTCTCGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016591 GO:0016592 GO:0019219 GO:0019222 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070847 GO:0080090 GO:0090575 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med4

Protein Analysis

601

Amino Acids

66.55

Weight (kDa)

9.35

Isoelectric Point (pI)

36.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
MFS_1	PF07690	198 - 560	3.5e-62	Major Facilitator Superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003446)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02850
fragaria_vesca	FvH4_7g16920 FvH4_7g16920 FvH4_7g16920 FvH4_7g16920 FvH4_7g17650 FvH4_7g17650 FvH4_7g17650
prunus_persica	Prupe.2G197600_v2.0.a1 Prupe.2G197600_v2.0.a1 Prupe.2G197600_v2.0.a1
pyrus_communis	pycom01g11270
rosa_chinensis	RchiOBHm_Chr1g0360161 RchiOBHm_Chr1g0361081
rosa_laevigata	RLG00000027749 RLG00000027825
rosa_multiflora	Rmu_sc0003333.1_g000008 Rmu_sc0007813.1_g000004 Rmu_ssc0000368.1_g000045
rosa_roxburghii	Rroxscaffold_4G00295440 Rroxscaffold_4G00296330
rosa_rugosa	Rorug01G0275400 Rorug01G0275500 Rorug01G0285400 Rorug01G0285500
rosa_samantha	Rh1AG289200 Rh1AG296800 Rh1BG254900 Rh1BG261100 Rh1CG272200 Rh1CG278400 Rh1DG284300 Rh1DG291100
rosa_wichuraiana	Rw0G002900 Rw1G025660 Rw1G026220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1531
Acc36I	ACCTGC	1 cut(s)	1531
AccB1I	GGYRCC	3 cut(s)	197, 285, 535
AccB7I	CCANNNNNTGG	1 cut(s)	555
AccI	GTMKAC	1 cut(s)	106
AciI	CCGC	1 cut(s)	768
AclWI	GGATC	5 cut(s)	433, 446, 511, 630, 1124
AcoI	YGGCCR	1 cut(s)	1008
AcsI	RAATTY	3 cut(s)	31, 665, 1034
AcuI	CTGAAG	2 cut(s)	98, 195
AdeI	CACNNNGTG	1 cut(s)	555
AfaI	GTAC	4 cut(s)	145, 1678, 1694, 1748
AfiI	CCNNNNNNNGG	4 cut(s)	193, 194, 555, 1270
AgsI	TTSAA	8 cut(s)	68, 345, 358, 367, 1324, 1330, 1593, 1729
AhlI	ACTAGT	1 cut(s)	967
AjnI	CCWGG	2 cut(s)	192, 551
AjuI	GAANNNNNNNTTGG	4 cut(s)	17, 49, 764, 796
AloI	GAACNNNNNNTCC	5 cut(s)	22, 54, 1763, 1779, 1795
AluBI	AGCT	7 cut(s)	382, 391, 515, 1138, 1159, 1232, 1562
AluI	AGCT	7 cut(s)	382, 391, 515, 1138, 1159, 1232, 1562
Alw21I	GWGCWC	3 cut(s)	588, 961, 1161
Alw26I	GTCTC	3 cut(s)	93, 270, 1255
AlwI	GGATC	5 cut(s)	433, 446, 511, 630, 1124
AlwNI	CAGNNNCTG	1 cut(s)	1083
AoxI	GGCC	4 cut(s)	153, 1008, 1043, 1582
ApeKI	GCWGC	3 cut(s)	833, 1077, 1682
ApoI	RAATTY	3 cut(s)	31, 665, 1034
Asp700I	GAANNNNTTC	1 cut(s)	125
AspA2I	CCTAGG	1 cut(s)	1165
AspS9I	GGNCC	4 cut(s)	153, 1044, 1481, 1610
AsuC2I	CCSGG	2 cut(s)	1345, 1690
AsuHPI	GGTGA	4 cut(s)	521, 589, 899, 1589
AvaII	GGWCC	2 cut(s)	1481, 1610
AvrII	CCTAGG	1 cut(s)	1165
BaeI	ACNNNNGTAYC	2 cut(s)	1404, 1437
BamHI	GGATCC	1 cut(s)	438
BanI	GGYRCC	3 cut(s)	197, 285, 535
BanII	GRGCYC	3 cut(s)	1161, 1243, 1350
BbsI	GAAGAC	1 cut(s)	839
Bbv12I	GWGCWC	3 cut(s)	588, 961, 1161
BbvI	GCAGC	3 cut(s)	820, 1089, 1694
BccI	CCATC	2 cut(s)	521, 567
BceAI	ACGGC	2 cut(s)	995, 1494
BciT130I	CCWGG	2 cut(s)	194, 553
BciVI	GTATCC	1 cut(s)	556
BcnI	CCSGG	2 cut(s)	1345, 1690
BcoDI	GTCTC	3 cut(s)	93, 270, 1255
BcuI	ACTAGT	1 cut(s)	967
BfaI	CTAG	3 cut(s)	171, 968, 1166
BfmI	CTRYAG	2 cut(s)	315, 1618
BfuAI	ACCTGC	1 cut(s)	1531
BfuI	GTATCC	1 cut(s)	556
BisI	GCNGC	3 cut(s)	834, 1078, 1683
BlnI	CCTAGG	1 cut(s)	1165
BlpI	GCTNAGC	2 cut(s)	1100, 1505
BlsI	GCNGC	3 cut(s)	835, 1079, 1684
Bme1390I	CCNGG	4 cut(s)	194, 553, 1345, 1690
Bme18I	GGWCC	2 cut(s)	1481, 1610
BmgT120I	GGNCC	4 cut(s)	153, 1044, 1481, 1610
BmiI	GGNNCC	7 cut(s)	199, 287, 440, 537, 1276, 1349, 1482
BmrFI	CCNGG	4 cut(s)	194, 553, 1345, 1690
BmrI	ACTGGG	1 cut(s)	1011
BmsI	GCATC	6 cut(s)	205, 303, 314, 1089, 1287, 1555
BmuI	ACTGGG	1 cut(s)	1011
BpiI	GAAGAC	1 cut(s)	839
BplI	GAGNNNNNCTC	2 cut(s)	476, 508
BpmI	CTGGAG	1 cut(s)	1685
Bpu10I	CCTNAGC	1 cut(s)	52
Bpu1102I	GCTNAGC	2 cut(s)	1100, 1505
BpuMI	CCSGG	2 cut(s)	1345, 1690
BsaJI	CCNNGG	7 cut(s)	149, 193, 660, 1165, 1205, 1364, 1374
BsaWI	WCCGGW	2 cut(s)	27, 1784
BsaXI	ACNNNNNCTCC	1 cut(s)	1779
Bsc4I	CCNNNNNNNGG	4 cut(s)	193, 194, 555, 1270
Bse118I	RCCGGY	1 cut(s)	249
Bse1I	ACTGG	5 cut(s)	201, 404, 677, 938, 1006
Bse3DI	GCAATG	2 cut(s)	639, 1180
BseBI	CCWGG	2 cut(s)	194, 553
BseDI	CCNNGG	7 cut(s)	149, 193, 660, 1165, 1205, 1364, 1374
BseGI	GGATG	3 cut(s)	1161, 1302, 1723
BseLI	CCNNNNNNNGG	4 cut(s)	193, 194, 555, 1270
BseMI	GCAATG	2 cut(s)	639, 1180
BseMII	CTCAG	5 cut(s)	66, 408, 746, 1091, 1496
BseNI	ACTGG	5 cut(s)	201, 404, 677, 938, 1006
BseRI	GAGGAG	1 cut(s)	1340
BseXI	GCAGC	3 cut(s)	820, 1089, 1694
BseYI	CCCAGC	1 cut(s)	1633
BsgI	GTGCAG	1 cut(s)	1164
BshFI	GGCC	4 cut(s)	155, 1010, 1045, 1584
BshNI	GGYRCC	3 cut(s)	197, 285, 535
BsiHKAI	GWGCWC	3 cut(s)	588, 961, 1161
BsiSI	CCGG	6 cut(s)	28, 250, 458, 1344, 1689, 1785
BslFI	GGGAC	1 cut(s)	1494
BslI	CCNNNNNNNGG	4 cut(s)	193, 194, 555, 1270
BsmAI	GTCTC	3 cut(s)	93, 270, 1255
BsmFI	GGGAC	1 cut(s)	1494
BsmI	GAATGC	1 cut(s)	1568
BsnI	GGCC	4 cut(s)	155, 1010, 1045, 1584
Bsp1286I	GDGCHC	5 cut(s)	588, 961, 1161, 1243, 1350
Bsp143I	GATC	6 cut(s)	438, 503, 622, 795, 1129, 1455
Bsp1720I	GCTNAGC	2 cut(s)	1100, 1505
Bsp19I	CCATGG	2 cut(s)	1364, 1374
BspACI	CCGC	1 cut(s)	768
BspANI	GGCC	4 cut(s)	155, 1010, 1045, 1584
BspCNI	CTCAG	5 cut(s)	65, 409, 745, 1092, 1497
BspLI	GGNNCC	7 cut(s)	199, 287, 440, 537, 1276, 1349, 1482
BspMI	ACCTGC	1 cut(s)	1531
BspPI	GGATC	5 cut(s)	433, 446, 511, 630, 1124
BspT107I	GGYRCC	3 cut(s)	197, 285, 535
BsrDI	GCAATG	2 cut(s)	639, 1180
BsrFI	RCCGGY	1 cut(s)	249
BsrI	ACTGG	5 cut(s)	201, 404, 677, 938, 1006
BssAI	RCCGGY	1 cut(s)	249
BssECI	CCNNGG	7 cut(s)	149, 193, 660, 1165, 1205, 1364, 1374
BssMI	GATC	6 cut(s)	438, 503, 622, 795, 1129, 1455
BssT1I	CCWWGG	6 cut(s)	149, 660, 1165, 1205, 1364, 1374
Bst2UI	CCWGG	2 cut(s)	194, 553
Bst4CI	ACNGT	7 cut(s)	104, 228, 688, 817, 1198, 1447, 1762
Bst6I	CTCTTC	1 cut(s)	52
BstAPI	GCANNNNNTGC	1 cut(s)	1548
BstC8I	GCNNGC	3 cut(s)	870, 906, 1549
BstDEI	CTNAG	8 cut(s)	52, 417, 732, 927, 1100, 1139, 1182, 1505
BstDSI	CCRYGG	2 cut(s)	1364, 1374
BstF5I	GGATG	3 cut(s)	1161, 1302, 1723
BstKTI	GATC	6 cut(s)	441, 506, 625, 798, 1132, 1458
BstMAI	GTCTC	3 cut(s)	93, 270, 1255
BstMBI	GATC	6 cut(s)	438, 503, 622, 795, 1129, 1455
BstMWI	GCNNNNNNNGC	8 cut(s)	388, 521, 865, 905, 1074, 1238, 1385, 1548
BstNI	CCWGG	2 cut(s)	194, 553
BstNSI	RCATGY	2 cut(s)	985, 1551
BstSCI	CCNGG	4 cut(s)	192, 551, 1343, 1688
BstSFI	CTRYAG	2 cut(s)	315, 1618
BstV1I	GCAGC	3 cut(s)	820, 1089, 1694
BstV2I	GAAGAC	1 cut(s)	839
BstX2I	RGATCY	2 cut(s)	438, 1129
BstXI	CCANNNNNNTGG	2 cut(s)	1236, 1607
BstYI	RGATCY	2 cut(s)	438, 1129
BsuI	GTATCC	1 cut(s)	556
BsuRI	GGCC	4 cut(s)	155, 1010, 1045, 1584
BtgI	CCRYGG	2 cut(s)	1364, 1374
BtsCI	GGATG	3 cut(s)	1161, 1302, 1723
BtsI	GCAGTG	1 cut(s)	19
BtsIMutI	CAGTG	5 cut(s)	19, 813, 945, 999, 1335
BveI	ACCTGC	1 cut(s)	1531
Cac8I	GCNNGC	3 cut(s)	870, 906, 1549
CaiI	CAGNNNCTG	1 cut(s)	1083
Cfr10I	RCCGGY	1 cut(s)	249
Cfr13I	GGNCC	4 cut(s)	153, 1044, 1481, 1610
CsiI	ACCWGGT	1 cut(s)	551
Csp6I	GTAC	4 cut(s)	144, 1677, 1693, 1747
CviQI	GTAC	4 cut(s)	144, 1677, 1693, 1747
DdeI	CTNAG	8 cut(s)	52, 417, 732, 927, 1100, 1139, 1182, 1505
DpnI	GATC	6 cut(s)	440, 505, 624, 797, 1131, 1457
DpnII	GATC	6 cut(s)	438, 503, 622, 795, 1129, 1455
DraI	TTTAAA	1 cut(s)	1039
DraIII	CACNNNGTG	1 cut(s)	555
EaeI	YGGCCR	1 cut(s)	1008
Eam1104I	CTCTTC	1 cut(s)	52
EarI	CTCTTC	1 cut(s)	52
Ecl136II	GAGCTC	1 cut(s)	1159
Eco130I	CCWWGG	6 cut(s)	149, 660, 1165, 1205, 1364, 1374
Eco24I	GRGCYC	3 cut(s)	1161, 1243, 1350
Eco47I	GGWCC	2 cut(s)	1481, 1610
Eco53kI	GAGCTC	1 cut(s)	1159
Eco57I	CTGAAG	2 cut(s)	98, 195
EcoICRI	GAGCTC	1 cut(s)	1159
EcoRII	CCWGG	2 cut(s)	192, 551
EcoT14I	CCWWGG	6 cut(s)	149, 660, 1165, 1205, 1364, 1374
EcoT22I	ATGCAT	2 cut(s)	1544, 1570
EcoT38I	GRGCYC	3 cut(s)	1161, 1243, 1350
ErhI	CCWWGG	6 cut(s)	149, 660, 1165, 1205, 1364, 1374
FalI	AAGNNNNNCTT	2 cut(s)	321, 353
FaqI	GGGAC	1 cut(s)	1494
FauI	CCCGC	1 cut(s)	761
FauNDI	CATATG	1 cut(s)	749
FblI	GTMKAC	1 cut(s)	106
Fnu4HI	GCNGC	3 cut(s)	834, 1078, 1683
FokI	GGATG	3 cut(s)	1148, 1309, 1730
FriOI	GRGCYC	3 cut(s)	1161, 1243, 1350
Fsp4HI	GCNGC	3 cut(s)	834, 1078, 1683
FspBI	CTAG	3 cut(s)	171, 968, 1166
GluI	GCNGC	3 cut(s)	834, 1078, 1683
GsaI	CCCAGC	1 cut(s)	1637
GsuI	CTGGAG	1 cut(s)	1685
HaeIII	GGCC	4 cut(s)	155, 1010, 1045, 1584
HapII	CCGG	6 cut(s)	28, 250, 458, 1344, 1689, 1785
HincII	GTYRAC	3 cut(s)	433, 1290, 1371
HindII	GTYRAC	3 cut(s)	433, 1290, 1371
HindIII	AAGCTT	1 cut(s)	389
HinfI	GANTC	6 cut(s)	491, 562, 697, 736, 934, 1340
HpaI	GTTAAC	1 cut(s)	433
HpaII	CCGG	6 cut(s)	28, 250, 458, 1344, 1689, 1785
HphI	GGTGA	4 cut(s)	521, 589, 899, 1589
Hpy166II	GTNNAC	5 cut(s)	107, 433, 490, 1290, 1371
Hpy188I	TCNGA	4 cut(s)	214, 418, 735, 946
Hpy188III	TCNNGA	7 cut(s)	54, 171, 1030, 1133, 1441, 1516, 1799
Hpy8I	GTNNAC	5 cut(s)	107, 433, 490, 1290, 1371
HpyAV	CCTTC	2 cut(s)	236, 323
HpyCH4III	ACNGT	7 cut(s)	104, 228, 688, 817, 1198, 1447, 1762
HpyF10VI	GCNNNNNNNGC	8 cut(s)	388, 521, 865, 905, 1074, 1238, 1385, 1548
HpyF3I	CTNAG	8 cut(s)	52, 417, 732, 927, 1100, 1139, 1182, 1505
KspAI	GTTAAC	1 cut(s)	433
Kzo9I	GATC	6 cut(s)	438, 503, 622, 795, 1129, 1455
LmnI	GCTCC	3 cut(s)	591, 1353, 1559
Lsp1109I	GCAGC	3 cut(s)	820, 1089, 1694
LweI	GCATC	6 cut(s)	205, 303, 314, 1089, 1287, 1555
MabI	ACCWGGT	1 cut(s)	551
MaeI	CTAG	3 cut(s)	171, 968, 1166
MaeIII	GTNAC	4 cut(s)	298, 997, 1192, 1438
MalI	GATC	6 cut(s)	440, 505, 624, 797, 1131, 1457
MboI	GATC	6 cut(s)	438, 503, 622, 795, 1129, 1455
MboII	GAAGA	6 cut(s)	69, 201, 333, 333, 839, 1139
MfeI	CAATTG	1 cut(s)	1467
MflI	RGATCY	2 cut(s)	438, 1129
MhlI	GDGCHC	5 cut(s)	588, 961, 1161, 1243, 1350
MluCI	AATT	7 cut(s)	31, 665, 762, 1034, 1215, 1267, 1467
MlyI	GAGTC	1 cut(s)	485
MmeI	TCCRAC	2 cut(s)	48, 1382
Mph1103I	ATGCAT	2 cut(s)	1544, 1570
MroXI	GAANNNNTTC	1 cut(s)	125
MseI	TTAA	4 cut(s)	426, 432, 669, 1038
MspA1I	CMGCKG	1 cut(s)	1232
MspI	CCGG	6 cut(s)	28, 250, 458, 1344, 1689, 1785
MspR9I	CCNGG	4 cut(s)	194, 553, 1345, 1690
MunI	CAATTG	1 cut(s)	1467
Mva1269I	GAATGC	1 cut(s)	1568
MvaI	CCWGG	2 cut(s)	194, 553
MwoI	GCNNNNNNNGC	8 cut(s)	388, 521, 865, 905, 1074, 1238, 1385, 1548
NciI	CCSGG	2 cut(s)	1345, 1690
NcoI	CCATGG	2 cut(s)	1364, 1374
NdeI	CATATG	1 cut(s)	749
NdeII	GATC	6 cut(s)	438, 503, 622, 795, 1129, 1455
NlaIV	GGNNCC	7 cut(s)	199, 287, 440, 537, 1276, 1349, 1482
NmuCI	GTSAC	2 cut(s)	997, 1438
NsiI	ATGCAT	2 cut(s)	1544, 1570
NspI	RCATGY	2 cut(s)	985, 1551
PaeI	GCATGC	1 cut(s)	1551
PaqCI	CACCTGC	1 cut(s)	1531
PctI	GAATGC	1 cut(s)	1568
PdmI	GAANNNNTTC	1 cut(s)	125
PfeI	GAWTC	5 cut(s)	562, 697, 736, 934, 1340
PflMI	CCANNNNNTGG	1 cut(s)	555
PkrI	GCNGC	3 cut(s)	835, 1079, 1684
PleI	GAGTC	1 cut(s)	485
PpsI	GAGTC	1 cut(s)	485
Psp124BI	GAGCTC	1 cut(s)	1161
Psp6I	CCWGG	2 cut(s)	192, 551
PspFI	CCCAGC	1 cut(s)	1633
PspGI	CCWGG	2 cut(s)	192, 551
PspN4I	GGNNCC	7 cut(s)	199, 287, 440, 537, 1276, 1349, 1482
PspPI	GGNCC	4 cut(s)	153, 1044, 1481, 1610
PstNI	CAGNNNCTG	1 cut(s)	1083
PsuI	RGATCY	2 cut(s)	438, 1129
PvuII	CAGCTG	1 cut(s)	1232
RsaI	GTAC	4 cut(s)	145, 1678, 1694, 1748
RsaNI	GTAC	4 cut(s)	144, 1677, 1693, 1747
SacI	GAGCTC	1 cut(s)	1161
SaqAI	TTAA	4 cut(s)	426, 432, 669, 1038
SatI	GCNGC	3 cut(s)	834, 1078, 1683
Sau3AI	GATC	6 cut(s)	438, 503, 622, 795, 1129, 1455
Sau96I	GGNCC	4 cut(s)	153, 1044, 1481, 1610
SchI	GAGTC	1 cut(s)	485
ScrFI	CCNGG	4 cut(s)	194, 553, 1345, 1690
SduI	GDGCHC	5 cut(s)	588, 961, 1161, 1243, 1350
SexAI	ACCWGGT	1 cut(s)	551
SfaNI	GCATC	6 cut(s)	205, 303, 314, 1089, 1287, 1555
SfcI	CTRYAG	2 cut(s)	315, 1618
SinI	GGWCC	2 cut(s)	1481, 1610
SmiI	ATTTAAAT	1 cut(s)	1039
SpeI	ACTAGT	1 cut(s)	967
SphI	GCATGC	1 cut(s)	1551
Sse9I	AATT	7 cut(s)	31, 665, 762, 1034, 1215, 1267, 1467
SsiI	CCGC	1 cut(s)	768
SspMI	CTAG	3 cut(s)	171, 968, 1166
SstI	GAGCTC	1 cut(s)	1161
StyD4I	CCNGG	4 cut(s)	192, 551, 1343, 1688
StyI	CCWWGG	6 cut(s)	149, 660, 1165, 1205, 1364, 1374
SwaI	ATTTAAAT	1 cut(s)	1039
TaaI	ACNGT	7 cut(s)	104, 228, 688, 817, 1198, 1447, 1762
TaqI	TCGA	1 cut(s)	1800
TaqII	GACCGA	1 cut(s)	985
TasI	AATT	7 cut(s)	31, 665, 762, 1034, 1215, 1267, 1467
TatI	WGTACW	1 cut(s)	143
TfiI	GAWTC	5 cut(s)	562, 697, 736, 934, 1340
Tru1I	TTAA	4 cut(s)	426, 432, 669, 1038
Tru9I	TTAA	4 cut(s)	426, 432, 669, 1038
TscAI	CASTG	5 cut(s)	19, 813, 945, 1006, 1342
TseFI	GTSAC	2 cut(s)	997, 1438
TseI	GCWGC	3 cut(s)	833, 1077, 1682
Tsp45I	GTSAC	2 cut(s)	997, 1438
TspDTI	ATGAA	3 cut(s)	77, 255, 926
TspGWI	ACGGA	1 cut(s)	431
TspRI	CASTG	5 cut(s)	19, 813, 945, 1006, 1342
Van91I	CCANNNNNTGG	1 cut(s)	555
VpaK11BI	GGWCC	2 cut(s)	1481, 1610
XapI	RAATTY	3 cut(s)	31, 665, 1034
XbaI	TCTAGA	1 cut(s)	170
XceI	RCATGY	2 cut(s)	985, 1551
XmaJI	CCTAGG	1 cut(s)	1165
XmiI	GTMKAC	1 cut(s)	106
XmnI	GAANNNNTTC	1 cut(s)	125
XspI	CTAG	3 cut(s)	171, 968, 1166
Zsp2I	ATGCAT	2 cut(s)	1544, 1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.