Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0003446

Physical Location & Seq

Genomic Coordinates Reverse (-)

39321649 .. 39323924

Gene Structure 2276 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG261100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1206 bp

ATGCTTCAACCGCAAATTGTACAATCCCCAGCTAGGCTAGGCCTATCGAACCCCAATTCACCTGCTTTTCAAAACCCTACCCCTCCAAAACTCCCTTTACAGCAGCAGCCTTCTTCTTCTTCACAGCATTCCAATCTCTCCCCATCGCTGGTCTCTCTCCTCTCGCCCCTCCCAAGAGCCCAATCCCTTCTAGGTCAAATGGCCTCCCTCGCGTCTAAACTCTTTGAAGTGTCACCTAATCGGTCCCTTTGGCTCAATGCATTCCGCGGTTCCTTCCCAACCTTCCTTTCTTCCCAAACTCAATCTCAGTTTTCAATCCCACTTGAGAACTGTCCTTCCTCCACCAAAGATGTCCTCTCCCAGTTCACAGCTCTTCAAACCCAACTCTTTGAGGCTGTTGCTGAACTCCAAGAAATTCTTGATCTTCAGGATGCTAAGCTGAAAATTGCACATGAAGTACGGTCCAAGGATGTCTCACTTCTTGCCTTTTCCAAGAAACTCAAGGATGTTGAGCAGATGCTTGATAATCTTGTTGATGATTACTCAGATTTGTCCCGCCCCAAAAGGGTAAAATTGGATGATGGTTCAGAAGATGATTCTTCATGCACTACTACTGTTTCATCTCAGTTGAATTTATCAGATATTTTGTCATACGCGCATCGGATAAGCTACACAACATTTGCACCACCAGAATTTGGGGCTGGACAAGCTCCTCTTCGCGGATCACTCCCACCTGCCCCGCAGGAGGAGCACATGCGTGCTTCTCAGCTATACAATTTTGCAAACCTGGATGTTGGTTTGCCCAAGACTGTAGACAGCACGGAGAAAACAATTGAAGCAATCATGGAGCCCCCACCTCCTGCTCCAACAGAAGCCAATCAAGCTCCAAACTTTGGTGCACTTCAAGGTCGGCTTCCTCCAAATATCACAATTCCGTCTGGTTGGAAACCTGGGATGCCTGTGGAGTTGCCTACCGATTTTCCTATGCCCCCACCTGGATGGAAGCCTGGGGACCCAGTGCCTTTGCCCCCAGTGGGATCTCTTCCAGTTCCTAGGGTCGAGGATCAACATTTACGGCCTAAACCTCAAGCAATGCATAAACCGCAAGAGCCAATACAAGTTAAGCATGTTGAACTGGATATTCCTGATCAAGACGATAGTAGCGATTATAGTAGCGATGAAGGAAGCTTTGAAGATGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016591 GO:0016592 GO:0019219 GO:0019222 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070847 GO:0080090 GO:0090575 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med4

Protein Analysis

401

Amino Acids

43.83

Weight (kDa)

4.78

Isoelectric Point (pI)

72.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Med4	PF10018	118 - 282	1.7e-12	Vitamin-D-receptor interacting Mediator subunit 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003446)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02850
fragaria_vesca	FvH4_7g16920 FvH4_7g16920 FvH4_7g16920 FvH4_7g16920 FvH4_7g17650 FvH4_7g17650 FvH4_7g17650
prunus_persica	Prupe.2G197600_v2.0.a1 Prupe.2G197600_v2.0.a1 Prupe.2G197600_v2.0.a1
pyrus_communis	pycom01g11270
rosa_chinensis	RchiOBHm_Chr1g0360161 RchiOBHm_Chr1g0361081
rosa_laevigata	RLG00000027749 RLG00000027825
rosa_multiflora	Rmu_sc0003333.1_g000008 Rmu_sc0007813.1_g000004 Rmu_ssc0000368.1_g000045
rosa_roxburghii	Rroxscaffold_4G00295440 Rroxscaffold_4G00296330
rosa_rugosa	Rorug01G0275400 Rorug01G0275500 Rorug01G0285400 Rorug01G0285500
rosa_samantha	Rh1AG289200 Rh1AG296800 Rh1BG254900 Rh1BG261100 Rh1CG272200 Rh1CG278400 Rh1DG284300 Rh1DG291100
rosa_wichuraiana	Rw0G002900 Rw1G025660 Rw1G026220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	70, 742
Acc36I	ACCTGC	2 cut(s)	70, 742
AccB7I	CCANNNNNTGG	2 cut(s)	695, 893
AccI	GTMKAC	1 cut(s)	813
AccII	CGCG	4 cut(s)	212, 267, 656, 720
AciI	CCGC	7 cut(s)	11, 265, 267, 556, 720, 740, 1103
AclWI	GGATC	3 cut(s)	730, 1045, 1071
AcsI	RAATTY	3 cut(s)	414, 631, 692
AcuI	CTGAAG	1 cut(s)	410
AfaI	GTAC	2 cut(s)	21, 459
AfiI	CCNNNNNNNGG	9 cut(s)	33, 148, 565, 695, 719, 745, 893, 995, 1034
AjnI	CCWGG	4 cut(s)	786, 949, 994, 1006
AjuI	GAANNNNNNNTTGG	2 cut(s)	271, 303
AleI	CACNNNNGTG	1 cut(s)	756
AloI	GAACNNNNNNTCC	2 cut(s)	320, 352
AluBI	AGCT	8 cut(s)	32, 371, 439, 669, 710, 769, 884, 1188
AluI	AGCT	8 cut(s)	32, 371, 439, 669, 710, 769, 884, 1188
Alw21I	GWGCWC	2 cut(s)	753, 901
Alw26I	GTCTC	2 cut(s)	157, 478
Alw44I	GTGCAC	1 cut(s)	897
AlwI	GGATC	3 cut(s)	730, 1045, 1071
AoxI	GGCC	3 cut(s)	40, 201, 1076
ApaLI	GTGCAC	1 cut(s)	897
ApeKI	GCWGC	2 cut(s)	103, 106
ApoI	RAATTY	3 cut(s)	414, 631, 692
AspA2I	CCTAGG	1 cut(s)	1052
AspLEI	GCGC	1 cut(s)	658
AspS9I	GGNCC	3 cut(s)	243, 462, 1012
AsuHPI	GGTGA	2 cut(s)	51, 225
AvaII	GGWCC	3 cut(s)	243, 462, 1012
AvrII	CCTAGG	1 cut(s)	1052
BaeGI	GKGCMC	1 cut(s)	901
BanII	GRGCYC	2 cut(s)	181, 852
Bbv12I	GWGCWC	2 cut(s)	753, 901
BbvI	GCAGC	2 cut(s)	115, 118
BccI	CCATC	3 cut(s)	151, 575, 993
BceAI	ACGGC	1 cut(s)	1091
BciT130I	CCWGG	4 cut(s)	788, 951, 996, 1008
BclI	TGATCA	1 cut(s)	1147
BcoDI	GTCTC	2 cut(s)	157, 478
BfaI	CTAG	4 cut(s)	33, 38, 191, 1053
BfmI	CTRYAG	1 cut(s)	810
BfuAI	ACCTGC	2 cut(s)	70, 742
BisI	GCNGC	2 cut(s)	104, 107
BlnI	CCTAGG	1 cut(s)	1052
BlpI	GCTNAGC	1 cut(s)	435
BlsI	GCNGC	2 cut(s)	105, 108
Bme1390I	CCNGG	4 cut(s)	788, 951, 996, 1008
Bme18I	GGWCC	3 cut(s)	243, 462, 1012
BmgT120I	GGNCC	3 cut(s)	243, 462, 1012
BmiI	GGNNCC	5 cut(s)	245, 271, 849, 1013, 1014
BmrFI	CCNGG	4 cut(s)	788, 951, 996, 1008
BmrI	ACTGGG	3 cut(s)	355, 1010, 1025
BmsI	GCATC	4 cut(s)	421, 507, 667, 945
BmuI	ACTGGG	3 cut(s)	355, 1010, 1025
Bpu1102I	GCTNAGC	1 cut(s)	435
BpuEI	CTTGAG	3 cut(s)	344, 485, 1071
BsaI	GGTCTC	1 cut(s)	157
BsaJI	CCNNGG	5 cut(s)	265, 465, 950, 1007, 1052
Bsc4I	CCNNNNNNNGG	9 cut(s)	33, 148, 565, 695, 719, 745, 893, 995, 1034
Bse1I	ACTGG	5 cut(s)	361, 1016, 1031, 1046, 1140
Bse3DI	GCAATG	1 cut(s)	1098
BseBI	CCWGG	4 cut(s)	788, 951, 996, 1008
BseDI	CCNNGG	5 cut(s)	265, 465, 950, 1007, 1052
BseGI	GGATG	7 cut(s)	436, 475, 511, 583, 796, 960, 1004
BseLI	CCNNNNNNNGG	9 cut(s)	33, 148, 565, 695, 719, 745, 893, 995, 1034
BseMI	GCAATG	1 cut(s)	1098
BseMII	CTCAG	4 cut(s)	320, 558, 638, 779
BseNI	ACTGG	5 cut(s)	361, 1016, 1031, 1046, 1140
BseRI	GAGGAG	3 cut(s)	149, 702, 761
BseSI	GKGCMC	1 cut(s)	901
BseXI	GCAGC	2 cut(s)	115, 118
BseYI	CCCAGC	1 cut(s)	28
Bsh1236I	CGCG	4 cut(s)	212, 267, 656, 720
BshFI	GGCC	3 cut(s)	42, 203, 1078
BsiHKAI	GWGCWC	2 cut(s)	753, 901
BslFI	GGGAC	3 cut(s)	229, 538, 1025
BslI	CCNNNNNNNGG	9 cut(s)	33, 148, 565, 695, 719, 745, 893, 995, 1034
BsmAI	GTCTC	2 cut(s)	157, 478
BsmFI	GGGAC	3 cut(s)	229, 538, 1025
BsmI	GAATGC	2 cut(s)	127, 260
BsnI	GGCC	3 cut(s)	42, 203, 1078
Bso31I	GGTCTC	1 cut(s)	157
Bsp1286I	GDGCHC	4 cut(s)	181, 753, 852, 901
Bsp1407I	TGTACA	1 cut(s)	19
Bsp143I	GATC	5 cut(s)	421, 722, 1037, 1063, 1147
Bsp1720I	GCTNAGC	1 cut(s)	435
BspACI	CCGC	7 cut(s)	11, 265, 267, 556, 720, 740, 1103
BspANI	GGCC	3 cut(s)	42, 203, 1078
BspCNI	CTCAG	4 cut(s)	319, 557, 637, 778
BspFNI	CGCG	4 cut(s)	212, 267, 656, 720
BspLI	GGNNCC	5 cut(s)	245, 271, 849, 1013, 1014
BspMI	ACCTGC	2 cut(s)	70, 742
BspPI	GGATC	3 cut(s)	730, 1045, 1071
BspQI	GCTCTTC	1 cut(s)	378
BspTNI	GGTCTC	1 cut(s)	157
BsrDI	GCAATG	1 cut(s)	1098
BsrGI	TGTACA	1 cut(s)	19
BsrI	ACTGG	5 cut(s)	361, 1016, 1031, 1046, 1140
BssECI	CCNNGG	5 cut(s)	265, 465, 950, 1007, 1052
BssMI	GATC	5 cut(s)	421, 722, 1037, 1063, 1147
BssT1I	CCWWGG	2 cut(s)	465, 1052
Bst2UI	CCWGG	4 cut(s)	788, 951, 996, 1008
Bst4CI	ACNGT	4 cut(s)	332, 462, 616, 811
Bst6I	CTCTTC	3 cut(s)	378, 720, 1047
BstAUI	TGTACA	1 cut(s)	19
BstC8I	GCNNGC	1 cut(s)	759
BstDEI	CTNAG	5 cut(s)	306, 435, 544, 624, 765
BstDSI	CCRYGG	1 cut(s)	265
BstF5I	GGATG	7 cut(s)	436, 475, 511, 583, 796, 960, 1004
BstFNI	CGCG	4 cut(s)	212, 267, 656, 720
BstHHI	GCGC	1 cut(s)	658
BstKTI	GATC	5 cut(s)	424, 725, 1040, 1066, 1150
BstMAI	GTCTC	2 cut(s)	157, 478
BstMBI	GATC	5 cut(s)	421, 722, 1037, 1063, 1147
BstMWI	GCNNNNNNNGC	6 cut(s)	10, 209, 707, 748, 881, 1102
BstNI	CCWGG	4 cut(s)	788, 951, 996, 1008
BstNSI	RCATGY	2 cut(s)	757, 1130
BstSCI	CCNGG	4 cut(s)	786, 949, 994, 1006
BstSFI	CTRYAG	1 cut(s)	810
BstSLI	GKGCMC	1 cut(s)	901
BstUI	CGCG	4 cut(s)	212, 267, 656, 720
BstV1I	GCAGC	2 cut(s)	115, 118
BstX2I	RGATCY	1 cut(s)	1037
BstXI	CCANNNNNNTGG	1 cut(s)	999
BstYI	RGATCY	1 cut(s)	1037
BsuRI	GGCC	3 cut(s)	42, 203, 1078
BtgI	CCRYGG	1 cut(s)	265
BtgZI	GCGATG	2 cut(s)	129, 1191
BtsCI	GGATG	7 cut(s)	436, 475, 511, 583, 796, 960, 1004
BtsIMutI	CAGTG	2 cut(s)	1023, 1038
BveI	ACCTGC	2 cut(s)	70, 742
Cac8I	GCNNGC	1 cut(s)	759
CfoI	GCGC	1 cut(s)	658
Cfr13I	GGNCC	3 cut(s)	243, 462, 1012
Cfr42I	CCGCGG	1 cut(s)	268
CseI	GACGC	1 cut(s)	201
Csp6I	GTAC	2 cut(s)	20, 458
CviAII	CATG	5 cut(s)	452, 603, 754, 844, 1127
CviQI	GTAC	2 cut(s)	20, 458
DdeI	CTNAG	5 cut(s)	306, 435, 544, 624, 765
DpnI	GATC	5 cut(s)	423, 724, 1039, 1065, 1149
DpnII	GATC	5 cut(s)	421, 722, 1037, 1063, 1147
Eam1104I	CTCTTC	3 cut(s)	378, 720, 1047
EarI	CTCTTC	3 cut(s)	378, 720, 1047
Eco130I	CCWWGG	2 cut(s)	465, 1052
Eco147I	AGGCCT	1 cut(s)	42
Eco24I	GRGCYC	2 cut(s)	181, 852
Eco31I	GGTCTC	1 cut(s)	157
Eco47I	GGWCC	3 cut(s)	243, 462, 1012
Eco57I	CTGAAG	1 cut(s)	410
EcoO109I	RGGNCCY	1 cut(s)	1012
EcoRII	CCWGG	4 cut(s)	786, 949, 994, 1006
EcoT14I	CCWWGG	2 cut(s)	465, 1052
EcoT22I	ATGCAT	2 cut(s)	262, 1098
EcoT38I	GRGCYC	2 cut(s)	181, 852
ErhI	CCWWGG	2 cut(s)	465, 1052
FaeI	CATG	5 cut(s)	455, 606, 757, 847, 1130
FalI	AAGNNNNNCTT	6 cut(s)	402, 434, 699, 731, 897, 929
FaqI	GGGAC	3 cut(s)	229, 538, 1025
FatI	CATG	5 cut(s)	451, 602, 753, 843, 1126
FauI	CCCGC	2 cut(s)	563, 747
FbaI	TGATCA	1 cut(s)	1147
FblI	GTMKAC	1 cut(s)	813
Fnu4HI	GCNGC	2 cut(s)	104, 107
FokI	GGATG	7 cut(s)	443, 482, 518, 590, 803, 967, 1011
FriOI	GRGCYC	2 cut(s)	181, 852
Fsp4HI	GCNGC	2 cut(s)	104, 107
FspBI	CTAG	4 cut(s)	33, 38, 191, 1053
GlaI	GCGC	1 cut(s)	657
GluI	GCNGC	2 cut(s)	104, 107
GsaI	CCCAGC	1 cut(s)	32
HaeIII	GGCC	3 cut(s)	42, 203, 1078
HgaI	GACGC	1 cut(s)	201
HhaI	GCGC	1 cut(s)	658
Hin1II	CATG	5 cut(s)	455, 606, 757, 847, 1130
Hin6I	GCGC	1 cut(s)	656
HinP1I	GCGC	1 cut(s)	656
HindIII	AAGCTT	1 cut(s)	1186
HinfI	GANTC	1 cut(s)	596
HphI	GGTGA	2 cut(s)	51, 225
Hpy166II	GTNNAC	3 cut(s)	366, 814, 899
Hpy188I	TCNGA	4 cut(s)	547, 589, 640, 663
Hpy188III	TCNNGA	4 cut(s)	419, 428, 1145, 1151
Hpy8I	GTNNAC	3 cut(s)	366, 814, 899
HpyAV	CCTTC	6 cut(s)	120, 197, 283, 292, 345, 1175
HpyCH4III	ACNGT	4 cut(s)	332, 462, 616, 811
HpyCH4V	TGCA	7 cut(s)	260, 449, 606, 683, 782, 899, 1096
HpyF10VI	GCNNNNNNNGC	6 cut(s)	10, 209, 707, 748, 881, 1102
HpyF3I	CTNAG	5 cut(s)	306, 435, 544, 624, 765
Hsp92II	CATG	5 cut(s)	455, 606, 757, 847, 1130
HspAI	GCGC	1 cut(s)	656
KflI	GGGWCCC	1 cut(s)	1012
Ksp22I	TGATCA	1 cut(s)	1147
KspI	CCGCGG	1 cut(s)	268
Kzo9I	GATC	5 cut(s)	421, 722, 1037, 1063, 1147
LguI	GCTCTTC	1 cut(s)	378
LmnI	GCTCC	5 cut(s)	715, 748, 847, 868, 889
Lsp1109I	GCAGC	2 cut(s)	115, 118
LweI	GCATC	4 cut(s)	421, 507, 667, 945
MaeI	CTAG	4 cut(s)	33, 38, 191, 1053
MaeIII	GTNAC	1 cut(s)	231
MalI	GATC	5 cut(s)	423, 724, 1039, 1065, 1149
MboI	GATC	5 cut(s)	421, 722, 1037, 1063, 1147
MfeI	CAATTG	1 cut(s)	831
MflI	RGATCY	1 cut(s)	1037
MhlI	GDGCHC	4 cut(s)	181, 753, 852, 901
MmeI	TCCRAC	2 cut(s)	890, 923
Mph1103I	ATGCAT	2 cut(s)	262, 1098
MseI	TTAA	1 cut(s)	1122
MslI	CAYNNNNRTG	2 cut(s)	756, 997
MspA1I	CMGCKG	1 cut(s)	267
MspR9I	CCNGG	4 cut(s)	788, 951, 996, 1008
MunI	CAATTG	1 cut(s)	831
Mva1269I	GAATGC	2 cut(s)	127, 260
MvaI	CCWGG	4 cut(s)	788, 951, 996, 1008
MvnI	CGCG	4 cut(s)	212, 267, 656, 720
MwoI	GCNNNNNNNGC	6 cut(s)	10, 209, 707, 748, 881, 1102
NdeII	GATC	5 cut(s)	421, 722, 1037, 1063, 1147
NlaIII	CATG	5 cut(s)	455, 606, 757, 847, 1130
NlaIV	GGNNCC	5 cut(s)	245, 271, 849, 1013, 1014
NmuCI	GTSAC	1 cut(s)	231
NsiI	ATGCAT	2 cut(s)	262, 1098
NspI	RCATGY	2 cut(s)	757, 1130
OliI	CACNNNNGTG	1 cut(s)	756
PaqCI	CACCTGC	2 cut(s)	70, 742
PceI	AGGCCT	1 cut(s)	42
PciSI	GCTCTTC	1 cut(s)	378
PcsI	WCGNNNNNNNCGW	1 cut(s)	1161
PctI	GAATGC	2 cut(s)	127, 260
PfeI	GAWTC	1 cut(s)	596
PflMI	CCANNNNNTGG	2 cut(s)	695, 893
PkrI	GCNGC	2 cut(s)	105, 108
PpuMI	RGGWCCY	1 cut(s)	1012
Psp5II	RGGWCCY	1 cut(s)	1012
Psp6I	CCWGG	4 cut(s)	786, 949, 994, 1006
PspFI	CCCAGC	1 cut(s)	28
PspGI	CCWGG	4 cut(s)	786, 949, 994, 1006
PspN4I	GGNNCC	5 cut(s)	245, 271, 849, 1013, 1014
PspPI	GGNCC	3 cut(s)	243, 462, 1012
PspPPI	RGGWCCY	1 cut(s)	1012
PsuI	RGATCY	1 cut(s)	1037
RsaI	GTAC	2 cut(s)	21, 459
RsaNI	GTAC	2 cut(s)	20, 458
RseI	CAYNNNNRTG	2 cut(s)	756, 997
SacII	CCGCGG	1 cut(s)	268
SapI	GCTCTTC	1 cut(s)	378
SaqAI	TTAA	1 cut(s)	1122
SatI	GCNGC	2 cut(s)	104, 107
Sau3AI	GATC	5 cut(s)	421, 722, 1037, 1063, 1147
Sau96I	GGNCC	3 cut(s)	243, 462, 1012
ScrFI	CCNGG	4 cut(s)	788, 951, 996, 1008
SduI	GDGCHC	4 cut(s)	181, 753, 852, 901
SfaNI	GCATC	4 cut(s)	421, 507, 667, 945
SfcI	CTRYAG	1 cut(s)	810
Sfr303I	CCGCGG	1 cut(s)	268
SgrBI	CCGCGG	1 cut(s)	268
SinI	GGWCC	3 cut(s)	243, 462, 1012
SmiMI	CAYNNNNRTG	2 cut(s)	756, 997
SmlI	CTYRAG	3 cut(s)	323, 500, 1086
SmoI	CTYRAG	3 cut(s)	323, 500, 1086
SseBI	AGGCCT	1 cut(s)	42
SsiI	CCGC	7 cut(s)	11, 265, 267, 556, 720, 740, 1103
SspMI	CTAG	4 cut(s)	33, 38, 191, 1053
StuI	AGGCCT	1 cut(s)	42
StyD4I	CCNGG	4 cut(s)	786, 949, 994, 1006
StyI	CCWWGG	2 cut(s)	465, 1052
TaaI	ACNGT	4 cut(s)	332, 462, 616, 811
TaqI	TCGA	2 cut(s)	47, 1059
TaqII	GACCGA	1 cut(s)	231
TatI	WGTACW	1 cut(s)	19
TfiI	GAWTC	1 cut(s)	596
Tru1I	TTAA	1 cut(s)	1122
Tru9I	TTAA	1 cut(s)	1122
TscAI	CASTG	2 cut(s)	1023, 1038
TseFI	GTSAC	1 cut(s)	231
TseI	GCWGC	2 cut(s)	103, 106
Tsp45I	GTSAC	1 cut(s)	231
TspDTI	ATGAA	4 cut(s)	468, 591, 609, 1194
TspGWI	ACGGA	2 cut(s)	836, 924
TspRI	CASTG	2 cut(s)	1023, 1038
Van91I	CCANNNNNTGG	2 cut(s)	695, 893
VneI	GTGCAC	1 cut(s)	897
VpaK11BI	GGWCC	3 cut(s)	243, 462, 1012
XapI	RAATTY	3 cut(s)	414, 631, 692
XceI	RCATGY	2 cut(s)	757, 1130
XmaJI	CCTAGG	1 cut(s)	1052
XmiI	GTMKAC	1 cut(s)	813
XspI	CTAG	4 cut(s)	33, 38, 191, 1053
Zsp2I	ATGCAT	2 cut(s)	262, 1098

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.