Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0003446

Physical Location & Seq

Genomic Coordinates Forward (+)

15486111 .. 15488458

Gene Structure 2348 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00295440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1218 bp

ATGCTTCAACCGCAAATTGTACAATCCCCAGCTAGGCTAGGCCTTTCGAACCCCAATTCACCTGCTTTTCAAAACCCTACCCCTCCAAAACTCCCTTTACAGCAGCAGCCTTCTTCTTCTGCTTCTTCTTCTTCACAGCATTCCAATCTCTCCCCATCGCTGGTCTCTCTTCTCTCGCCCCTCCCAAGAGCCCAATCCCTTCTAGTTCAAATGGCCTCCCTCGCGTCTAAACTCTTTGAAGTGTCACCTAATCGGTCCCTTTGGCTCAATGCATTCCGCGGTTCCTTCCCAACCTTCCTTTCTTCCCAAACCCAATCTCAGTTTTCAATCCCGCTTGAGAACTGTCCTTCCTGCACCAAAGATGTCCTCTCCCAGTTCACAGCTCTTCAAACCCAACTCTTTGAGGCTGTTGCTGAACTCCAAGAAATTCTTGATCTTCAGGACGCTAAGCTGAAAATTGCACATGAAGTACGGTCCAAGGATGTCTCACTTCTTGCATTTTCCAAGAAACTCAAGGATGTTGAGCAGGTGCTTGATAATCTTGTTGATGATTACTCTGATTTGTCCTGCCCCAAAAGGGTAAAATGGGATGATGGTTCAGAAGATGATTCTTCATGCACTACTACTGTTTCATCTCAGTTGAATTTATCACATATTTTGTCATATGCGCATCGGATAAGCTACACAACATTTGCACCACCAGAATTTGGGGCTGGACAAGCTCCTCTTCGCGGATCACTCCCACCTGCCCCGCAGGAGGAGCACATGCGTGCTTCTCAGCTATACAATTTTGCAAACCTGAATGTTGGTTTGCCCAAGACTGTAGACAGCACGGAGAAAACAATTGAAGCAATCATGGAGCCCCCACCTCTTGCGCCAACAGAAGCCAATCAAGCTCCAAAGTTTGGTGCACTTCAAGGTCGGCTTCCTCCAAATATCACAATTCCGTCTGGTTGGAAACCTGGGATGCCTGTGGAGTTGCCTTCTGATTTTCCTATGCCCCCACCTGGATGGAAGCCTGGGGACCCAGTGCCTTTGCCCCCAGTGGGATCTCTTCCAGTTCCTAAGGTCGAGGATCAACATTTACGGCCTAAACCTCAAGCAATGCATAAACCGCAAGAGCCAATACAAGTTAGGCATGTTGAACTGGATATTCCTGATCAAGACGATAGTAGCGATTATAGTAGCGATGAAGAAAGCTTTGAAGATGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016591 GO:0016592 GO:0019219 GO:0019222 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070847 GO:0080090 GO:0090575 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med4

Protein Analysis

405

Amino Acids

44.31

Weight (kDa)

4.88

Isoelectric Point (pI)

76.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Med4	PF10018	122 - 281	6.6e-12	Vitamin-D-receptor interacting Mediator subunit 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003446)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02850
fragaria_vesca	FvH4_7g16920 FvH4_7g16920 FvH4_7g16920 FvH4_7g16920 FvH4_7g17650 FvH4_7g17650 FvH4_7g17650
prunus_persica	Prupe.2G197600_v2.0.a1 Prupe.2G197600_v2.0.a1 Prupe.2G197600_v2.0.a1
pyrus_communis	pycom01g11270
rosa_chinensis	RchiOBHm_Chr1g0360161 RchiOBHm_Chr1g0361081
rosa_laevigata	RLG00000027749 RLG00000027825
rosa_multiflora	Rmu_sc0003333.1_g000008 Rmu_sc0007813.1_g000004 Rmu_ssc0000368.1_g000045
rosa_roxburghii	Rroxscaffold_4G00295440 Rroxscaffold_4G00296330
rosa_rugosa	Rorug01G0275400 Rorug01G0275500 Rorug01G0285400 Rorug01G0285500
rosa_samantha	Rh1AG289200 Rh1AG296800 Rh1BG254900 Rh1BG261100 Rh1CG272200 Rh1CG278400 Rh1DG284300 Rh1DG291100
rosa_wichuraiana	Rw0G002900 Rw1G025660 Rw1G026220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	70, 517, 754
Acc16I	TGCGCA	1 cut(s)	669
Acc36I	ACCTGC	3 cut(s)	70, 517, 754
AccB7I	CCANNNNNTGG	2 cut(s)	707, 905
AccI	GTMKAC	1 cut(s)	825
AccII	CGCG	3 cut(s)	224, 279, 732
AciI	CCGC	7 cut(s)	11, 277, 279, 332, 732, 752, 1115
AclWI	GGATC	3 cut(s)	742, 1057, 1083
AcsI	RAATTY	3 cut(s)	426, 643, 704
AcuI	CTGAAG	1 cut(s)	422
AfaI	GTAC	2 cut(s)	21, 471
AfiI	CCNNNNNNNGG	9 cut(s)	33, 160, 577, 707, 731, 757, 905, 1007, 1046
AjnI	CCWGG	3 cut(s)	961, 1006, 1018
AjuI	GAANNNNNNNTTGG	2 cut(s)	283, 315
AleI	CACNNNNGTG	1 cut(s)	768
AloI	GAACNNNNNNTCC	2 cut(s)	332, 364
AluBI	AGCT	8 cut(s)	32, 383, 451, 681, 722, 781, 896, 1200
AluI	AGCT	8 cut(s)	32, 383, 451, 681, 722, 781, 896, 1200
Alw21I	GWGCWC	2 cut(s)	765, 913
Alw26I	GTCTC	2 cut(s)	169, 490
Alw44I	GTGCAC	1 cut(s)	909
AlwI	GGATC	3 cut(s)	742, 1057, 1083
AoxI	GGCC	3 cut(s)	40, 213, 1088
ApaLI	GTGCAC	1 cut(s)	909
ApeKI	GCWGC	2 cut(s)	103, 106
ApoI	RAATTY	3 cut(s)	426, 643, 704
AspLEI	GCGC	2 cut(s)	670, 877
AspS9I	GGNCC	3 cut(s)	255, 474, 1024
AsuHPI	GGTGA	2 cut(s)	51, 237
AsuII	TTCGAA	1 cut(s)	47
AvaII	GGWCC	3 cut(s)	255, 474, 1024
AxyI	CCTNAGG	1 cut(s)	1065
BaeGI	GKGCMC	1 cut(s)	913
BanII	GRGCYC	2 cut(s)	193, 864
Bbv12I	GWGCWC	2 cut(s)	765, 913
BbvI	GCAGC	2 cut(s)	115, 118
BccI	CCATC	3 cut(s)	163, 587, 1005
BceAI	ACGGC	1 cut(s)	1103
BciT130I	CCWGG	3 cut(s)	963, 1008, 1020
BclI	TGATCA	1 cut(s)	1159
BcoDI	GTCTC	2 cut(s)	169, 490
BfaI	CTAG	3 cut(s)	33, 38, 203
BfmI	CTRYAG	1 cut(s)	822
BfuAI	ACCTGC	3 cut(s)	70, 517, 754
BisI	GCNGC	2 cut(s)	104, 107
BlpI	GCTNAGC	1 cut(s)	447
BlsI	GCNGC	2 cut(s)	105, 108
Bme1390I	CCNGG	3 cut(s)	963, 1008, 1020
Bme18I	GGWCC	3 cut(s)	255, 474, 1024
BmgT120I	GGNCC	3 cut(s)	255, 474, 1024
BmiI	GGNNCC	5 cut(s)	257, 283, 861, 1025, 1026
BmrFI	CCNGG	3 cut(s)	963, 1008, 1020
BmrI	ACTGGG	3 cut(s)	367, 1022, 1037
BmsI	GCATC	2 cut(s)	679, 957
BmuI	ACTGGG	3 cut(s)	367, 1022, 1037
Bpu1102I	GCTNAGC	1 cut(s)	447
Bpu14I	TTCGAA	1 cut(s)	47
BpuEI	CTTGAG	3 cut(s)	356, 497, 1083
BsaI	GGTCTC	1 cut(s)	169
BsaJI	CCNNGG	4 cut(s)	277, 477, 962, 1019
Bsc4I	CCNNNNNNNGG	9 cut(s)	33, 160, 577, 707, 731, 757, 905, 1007, 1046
Bse1I	ACTGG	5 cut(s)	373, 1028, 1043, 1058, 1152
Bse21I	CCTNAGG	1 cut(s)	1065
Bse3DI	GCAATG	1 cut(s)	1110
BseBI	CCWGG	3 cut(s)	963, 1008, 1020
BseDI	CCNNGG	4 cut(s)	277, 477, 962, 1019
BseGI	GGATG	5 cut(s)	487, 523, 595, 972, 1016
BseLI	CCNNNNNNNGG	9 cut(s)	33, 160, 577, 707, 731, 757, 905, 1007, 1046
BseMI	GCAATG	1 cut(s)	1110
BseMII	CTCAG	3 cut(s)	332, 650, 791
BseNI	ACTGG	5 cut(s)	373, 1028, 1043, 1058, 1152
BseRI	GAGGAG	2 cut(s)	714, 773
BseSI	GKGCMC	1 cut(s)	913
BseXI	GCAGC	2 cut(s)	115, 118
BseYI	CCCAGC	1 cut(s)	28
BsgI	GTGCAG	1 cut(s)	337
Bsh1236I	CGCG	3 cut(s)	224, 279, 732
BshFI	GGCC	3 cut(s)	42, 215, 1090
BsiHKAI	GWGCWC	2 cut(s)	765, 913
BslFI	GGGAC	2 cut(s)	241, 1037
BslI	CCNNNNNNNGG	9 cut(s)	33, 160, 577, 707, 731, 757, 905, 1007, 1046
BsmAI	GTCTC	2 cut(s)	169, 490
BsmFI	GGGAC	2 cut(s)	241, 1037
BsmI	GAATGC	2 cut(s)	139, 272
BsnI	GGCC	3 cut(s)	42, 215, 1090
Bso31I	GGTCTC	1 cut(s)	169
Bsp119I	TTCGAA	1 cut(s)	47
Bsp1286I	GDGCHC	4 cut(s)	193, 765, 864, 913
Bsp1407I	TGTACA	1 cut(s)	19
Bsp143I	GATC	5 cut(s)	433, 734, 1049, 1075, 1159
Bsp1720I	GCTNAGC	1 cut(s)	447
BspACI	CCGC	7 cut(s)	11, 277, 279, 332, 732, 752, 1115
BspANI	GGCC	3 cut(s)	42, 215, 1090
BspCNI	CTCAG	3 cut(s)	331, 649, 790
BspFNI	CGCG	3 cut(s)	224, 279, 732
BspLI	GGNNCC	5 cut(s)	257, 283, 861, 1025, 1026
BspMI	ACCTGC	3 cut(s)	70, 517, 754
BspPI	GGATC	3 cut(s)	742, 1057, 1083
BspQI	GCTCTTC	1 cut(s)	390
BspT104I	TTCGAA	1 cut(s)	47
BspTNI	GGTCTC	1 cut(s)	169
BsrDI	GCAATG	1 cut(s)	1110
BsrGI	TGTACA	1 cut(s)	19
BsrI	ACTGG	5 cut(s)	373, 1028, 1043, 1058, 1152
BssECI	CCNNGG	4 cut(s)	277, 477, 962, 1019
BssMI	GATC	5 cut(s)	433, 734, 1049, 1075, 1159
BssT1I	CCWWGG	1 cut(s)	477
Bst2UI	CCWGG	3 cut(s)	963, 1008, 1020
Bst4CI	ACNGT	4 cut(s)	344, 474, 628, 823
Bst6I	CTCTTC	4 cut(s)	174, 390, 732, 1059
BstAUI	TGTACA	1 cut(s)	19
BstBI	TTCGAA	1 cut(s)	47
BstC8I	GCNNGC	1 cut(s)	771
BstDEI	CTNAG	5 cut(s)	318, 447, 636, 777, 1065
BstDSI	CCRYGG	1 cut(s)	277
BstF5I	GGATG	5 cut(s)	487, 523, 595, 972, 1016
BstFNI	CGCG	3 cut(s)	224, 279, 732
BstHHI	GCGC	2 cut(s)	670, 877
BstKTI	GATC	5 cut(s)	436, 737, 1052, 1078, 1162
BstMAI	GTCTC	2 cut(s)	169, 490
BstMBI	GATC	5 cut(s)	433, 734, 1049, 1075, 1159
BstMWI	GCNNNNNNNGC	6 cut(s)	10, 221, 719, 760, 893, 1114
BstNI	CCWGG	3 cut(s)	963, 1008, 1020
BstNSI	RCATGY	2 cut(s)	769, 1142
BstSCI	CCNGG	3 cut(s)	961, 1006, 1018
BstSFI	CTRYAG	1 cut(s)	822
BstSLI	GKGCMC	1 cut(s)	913
BstUI	CGCG	3 cut(s)	224, 279, 732
BstV1I	GCAGC	2 cut(s)	115, 118
BstX2I	RGATCY	1 cut(s)	1049
BstXI	CCANNNNNNTGG	1 cut(s)	1011
BstYI	RGATCY	1 cut(s)	1049
Bsu36I	CCTNAGG	1 cut(s)	1065
BsuRI	GGCC	3 cut(s)	42, 215, 1090
BtgI	CCRYGG	1 cut(s)	277
BtgZI	GCGATG	2 cut(s)	141, 1203
BtsCI	GGATG	5 cut(s)	487, 523, 595, 972, 1016
BtsIMutI	CAGTG	2 cut(s)	1035, 1050
BveI	ACCTGC	3 cut(s)	70, 517, 754
Cac8I	GCNNGC	1 cut(s)	771
CfoI	GCGC	2 cut(s)	670, 877
Cfr13I	GGNCC	3 cut(s)	255, 474, 1024
Cfr42I	CCGCGG	1 cut(s)	280
CseI	GACGC	2 cut(s)	213, 452
Csp6I	GTAC	2 cut(s)	20, 470
CviAII	CATG	5 cut(s)	464, 615, 766, 856, 1139
CviQI	GTAC	2 cut(s)	20, 470
DdeI	CTNAG	5 cut(s)	318, 447, 636, 777, 1065
DpnI	GATC	5 cut(s)	435, 736, 1051, 1077, 1161
DpnII	GATC	5 cut(s)	433, 734, 1049, 1075, 1159
Eam1104I	CTCTTC	4 cut(s)	174, 390, 732, 1059
EarI	CTCTTC	4 cut(s)	174, 390, 732, 1059
Eco130I	CCWWGG	1 cut(s)	477
Eco147I	AGGCCT	1 cut(s)	42
Eco24I	GRGCYC	2 cut(s)	193, 864
Eco31I	GGTCTC	1 cut(s)	169
Eco47I	GGWCC	3 cut(s)	255, 474, 1024
Eco57I	CTGAAG	1 cut(s)	422
Eco81I	CCTNAGG	1 cut(s)	1065
EcoO109I	RGGNCCY	1 cut(s)	1024
EcoRII	CCWGG	3 cut(s)	961, 1006, 1018
EcoT14I	CCWWGG	1 cut(s)	477
EcoT22I	ATGCAT	2 cut(s)	274, 1110
EcoT38I	GRGCYC	2 cut(s)	193, 864
ErhI	CCWWGG	1 cut(s)	477
FaeI	CATG	5 cut(s)	467, 618, 769, 859, 1142
FalI	AAGNNNNNCTT	6 cut(s)	414, 446, 711, 743, 909, 941
FaqI	GGGAC	2 cut(s)	241, 1037
FatI	CATG	5 cut(s)	463, 614, 765, 855, 1138
FauI	CCCGC	2 cut(s)	339, 759
FauNDI	CATATG	1 cut(s)	664
FbaI	TGATCA	1 cut(s)	1159
FblI	GTMKAC	1 cut(s)	825
Fnu4HI	GCNGC	2 cut(s)	104, 107
FokI	GGATG	5 cut(s)	494, 530, 602, 979, 1023
FriOI	GRGCYC	2 cut(s)	193, 864
Fsp4HI	GCNGC	2 cut(s)	104, 107
FspAI	RTGCGCAY	1 cut(s)	669
FspBI	CTAG	3 cut(s)	33, 38, 203
FspI	TGCGCA	1 cut(s)	669
GlaI	GCGC	2 cut(s)	669, 876
GluI	GCNGC	2 cut(s)	104, 107
GsaI	CCCAGC	1 cut(s)	32
HaeIII	GGCC	3 cut(s)	42, 215, 1090
HgaI	GACGC	2 cut(s)	213, 452
HhaI	GCGC	2 cut(s)	670, 877
Hin1II	CATG	5 cut(s)	467, 618, 769, 859, 1142
Hin6I	GCGC	2 cut(s)	668, 875
HinP1I	GCGC	2 cut(s)	668, 875
HindIII	AAGCTT	1 cut(s)	1198
HinfI	GANTC	1 cut(s)	608
HphI	GGTGA	2 cut(s)	51, 237
Hpy166II	GTNNAC	3 cut(s)	378, 826, 911
Hpy188I	TCNGA	4 cut(s)	559, 601, 675, 988
Hpy188III	TCNNGA	4 cut(s)	431, 440, 1157, 1163
Hpy8I	GTNNAC	3 cut(s)	378, 826, 911
HpyAV	CCTTC	6 cut(s)	120, 209, 295, 304, 357, 993
HpyCH4III	ACNGT	4 cut(s)	344, 474, 628, 823
HpyCH4V	TGCA	9 cut(s)	272, 354, 461, 497, 618, 695, 794, 911, 1108
HpyF10VI	GCNNNNNNNGC	6 cut(s)	10, 221, 719, 760, 893, 1114
HpyF3I	CTNAG	5 cut(s)	318, 447, 636, 777, 1065
Hsp92II	CATG	5 cut(s)	467, 618, 769, 859, 1142
HspAI	GCGC	2 cut(s)	668, 875
KflI	GGGWCCC	1 cut(s)	1024
Ksp22I	TGATCA	1 cut(s)	1159
KspI	CCGCGG	1 cut(s)	280
Kzo9I	GATC	5 cut(s)	433, 734, 1049, 1075, 1159
LguI	GCTCTTC	1 cut(s)	390
LmnI	GCTCC	4 cut(s)	727, 760, 859, 901
Lsp1109I	GCAGC	2 cut(s)	115, 118
LweI	GCATC	2 cut(s)	679, 957
MaeI	CTAG	3 cut(s)	33, 38, 203
MaeIII	GTNAC	1 cut(s)	243
MalI	GATC	5 cut(s)	435, 736, 1051, 1077, 1161
MboI	GATC	5 cut(s)	433, 734, 1049, 1075, 1159
MfeI	CAATTG	1 cut(s)	843
MflI	RGATCY	1 cut(s)	1049
MhlI	GDGCHC	4 cut(s)	193, 765, 864, 913
MluCI	AATT	9 cut(s)	15, 55, 426, 456, 643, 704, 787, 843, 942
MmeI	TCCRAC	1 cut(s)	935
Mph1103I	ATGCAT	2 cut(s)	274, 1110
MslI	CAYNNNNRTG	2 cut(s)	768, 1009
MspA1I	CMGCKG	1 cut(s)	279
MspR9I	CCNGG	3 cut(s)	963, 1008, 1020
MunI	CAATTG	1 cut(s)	843
Mva1269I	GAATGC	2 cut(s)	139, 272
MvaI	CCWGG	3 cut(s)	963, 1008, 1020
MvnI	CGCG	3 cut(s)	224, 279, 732
MwoI	GCNNNNNNNGC	6 cut(s)	10, 221, 719, 760, 893, 1114
NdeI	CATATG	1 cut(s)	664
NdeII	GATC	5 cut(s)	433, 734, 1049, 1075, 1159
NlaIII	CATG	5 cut(s)	467, 618, 769, 859, 1142
NlaIV	GGNNCC	5 cut(s)	257, 283, 861, 1025, 1026
NmuCI	GTSAC	1 cut(s)	243
NsbI	TGCGCA	1 cut(s)	669
NsiI	ATGCAT	2 cut(s)	274, 1110
NspI	RCATGY	2 cut(s)	769, 1142
NspV	TTCGAA	1 cut(s)	47
OliI	CACNNNNGTG	1 cut(s)	768
PaqCI	CACCTGC	3 cut(s)	70, 517, 754
PceI	AGGCCT	1 cut(s)	42
PciSI	GCTCTTC	1 cut(s)	390
PcsI	WCGNNNNNNNCGW	1 cut(s)	1173
PctI	GAATGC	2 cut(s)	139, 272
PfeI	GAWTC	1 cut(s)	608
PflMI	CCANNNNNTGG	2 cut(s)	707, 905
PkrI	GCNGC	2 cut(s)	105, 108
PpuMI	RGGWCCY	1 cut(s)	1024
Psp5II	RGGWCCY	1 cut(s)	1024
Psp6I	CCWGG	3 cut(s)	961, 1006, 1018
PspFI	CCCAGC	1 cut(s)	28
PspGI	CCWGG	3 cut(s)	961, 1006, 1018
PspN4I	GGNNCC	5 cut(s)	257, 283, 861, 1025, 1026
PspPI	GGNCC	3 cut(s)	255, 474, 1024
PspPPI	RGGWCCY	1 cut(s)	1024
PsuI	RGATCY	1 cut(s)	1049
RsaI	GTAC	2 cut(s)	21, 471
RsaNI	GTAC	2 cut(s)	20, 470
RseI	CAYNNNNRTG	2 cut(s)	768, 1009
SacII	CCGCGG	1 cut(s)	280
SapI	GCTCTTC	1 cut(s)	390
SatI	GCNGC	2 cut(s)	104, 107
Sau3AI	GATC	5 cut(s)	433, 734, 1049, 1075, 1159
Sau96I	GGNCC	3 cut(s)	255, 474, 1024
ScrFI	CCNGG	3 cut(s)	963, 1008, 1020
SduI	GDGCHC	4 cut(s)	193, 765, 864, 913
SfaNI	GCATC	2 cut(s)	679, 957
SfcI	CTRYAG	1 cut(s)	822
Sfr303I	CCGCGG	1 cut(s)	280
SfuI	TTCGAA	1 cut(s)	47
SgrBI	CCGCGG	1 cut(s)	280
SinI	GGWCC	3 cut(s)	255, 474, 1024
SmiMI	CAYNNNNRTG	2 cut(s)	768, 1009
SmlI	CTYRAG	3 cut(s)	335, 512, 1098
SmoI	CTYRAG	3 cut(s)	335, 512, 1098
Sse9I	AATT	9 cut(s)	15, 55, 426, 456, 643, 704, 787, 843, 942
SseBI	AGGCCT	1 cut(s)	42
SsiI	CCGC	7 cut(s)	11, 277, 279, 332, 732, 752, 1115
SspMI	CTAG	3 cut(s)	33, 38, 203
StuI	AGGCCT	1 cut(s)	42
StyD4I	CCNGG	3 cut(s)	961, 1006, 1018
StyI	CCWWGG	1 cut(s)	477
TaaI	ACNGT	4 cut(s)	344, 474, 628, 823
TaqI	TCGA	2 cut(s)	47, 1071
TaqII	GACCGA	1 cut(s)	243
TasI	AATT	9 cut(s)	15, 55, 426, 456, 643, 704, 787, 843, 942
TatI	WGTACW	1 cut(s)	19
TfiI	GAWTC	1 cut(s)	608
TscAI	CASTG	2 cut(s)	1035, 1050
TseFI	GTSAC	1 cut(s)	243
TseI	GCWGC	2 cut(s)	103, 106
Tsp45I	GTSAC	1 cut(s)	243
TspDTI	ATGAA	4 cut(s)	480, 603, 621, 1206
TspGWI	ACGGA	2 cut(s)	848, 936
TspRI	CASTG	2 cut(s)	1035, 1050
Van91I	CCANNNNNTGG	2 cut(s)	707, 905
VneI	GTGCAC	1 cut(s)	909
VpaK11BI	GGWCC	3 cut(s)	255, 474, 1024
XapI	RAATTY	3 cut(s)	426, 643, 704
XceI	RCATGY	2 cut(s)	769, 1142
XmiI	GTMKAC	1 cut(s)	825
XspI	CTAG	3 cut(s)	33, 38, 203
Zsp2I	ATGCAT	2 cut(s)	274, 1110

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.