Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1C

Orthogroup ID

OG0003446

Physical Location & Seq

Genomic Coordinates Reverse (-)

54810387 .. 54813029

Gene Structure 2643 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1CG278400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1230 bp

ATGCTTCAACCGCAAATTGTACAATCGCCAGCCAGGCTAGGCCTATCGAACCCCAATTCACCTGCTTTTCAAAACCCTACCCCTCCAAAACTCCCTTTACAGCAGCAGCCTTCTTCTTCTGCTTCTGCTTCTTCTTCTTCTTCTTCACAGCATTCCAATCTATCCCCATCGCTGGTCTCTCTTCTCTCGCCCCTCCCAAGAGCCCAATCCCTTCTAGTTCAAATGGCCTCCCTCGCGTCTAAACTCTTTGAAGTGTCACCTAATCGGTCCCTTTGGCTCAATGCATTCCGCGGTTCCTTCCCAACCTTCCTTTCTTCCCAAACCCAATCTCAGTTTTCAATCCCGCTTGAGAACTGTCCTTCCTCCACCAAAGATGTCCTCTCCCAGTTCACAGCTCTTCAAACCCAACTCTTTGAGGCTGTTGCTGAACTCCAAGAAATCCTTGATCTTCAGGACGCTAAGCTGAAAATTGCACATGAAGTACGGTCCAAGGATGTCTCACTTCTTGCCTTTTCCAAGAAACTCAAGGATGTTGAGCAGGTGCTTGATAATCTTGTTGATGATTACTCTGATTTGTCCCGCCCCAAAAGGGTAAAATTGGATGATGGTTCAGAAGATGATTCTTCATGCGCTACTACTGTTTCATCTCAGTTGAATTTATCAGATATTTTGTCATATGCGCATCGGATAAGCTACACAACATTTGCACCACCAGAATATGGGGCTGGACAAGCTCCTCTTCGCGGATCACTCCCACCTGCCCCGCAGGAGGAGCACATGCGTGCTTCTCAGCTATACAATTTTGCAAACCTGGATGTTGGTTTGCCCAAGACTGTAGACAGCACGGAGAAAACAATTGAAGCAATCATGGAGCCCCCACCTCCTGCGCCAACAGAAGCCAATCAAGCTCCAAAGTTTGGTGCACTTCAAGGTCGGCTTCCTCCAAATATCACAATTCCGTCTGGTTGGAAACCTGGGATGCCTGTGGAGTTGCCTACCGATTTTCCTATGCCCCCACCTGGATGGAAGCCTGGGGACCCAGTGCCTTTGCCCCCAGTGGGATCTCTTCCAGTTCCTAAGGTCGAGGATCAGCATTTACGGCCTAAACCTCAAGCAATGCATAAACCGCAAGAGCCAATACAAGTTATGCATGTTGAACTGGATATTCCTGATCAAGATGATAGTAGCGATTATAGTAGCGATGAAGGAAGCTTTGAAGATGATGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000428 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005667 GO:0006355 GO:0006357 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0016591 GO:0016592 GO:0019219 GO:0019222 GO:0030880 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032991 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0044798 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0055029 GO:0060255 GO:0061695 GO:0065007 GO:0070013 GO:0070847 GO:0080090 GO:0090575 GO:1902494 GO:1903506 GO:1990234 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Med4

Protein Analysis

409

Amino Acids

44.48

Weight (kDa)

4.78

Isoelectric Point (pI)

73.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Med4	PF10018	126 - 291	5.6e-12	Vitamin-D-receptor interacting Mediator subunit 4

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003446)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G02850
fragaria_vesca	FvH4_7g16920 FvH4_7g16920 FvH4_7g16920 FvH4_7g16920 FvH4_7g17650 FvH4_7g17650 FvH4_7g17650
prunus_persica	Prupe.2G197600_v2.0.a1 Prupe.2G197600_v2.0.a1 Prupe.2G197600_v2.0.a1
pyrus_communis	pycom01g11270
rosa_chinensis	RchiOBHm_Chr1g0360161 RchiOBHm_Chr1g0361081
rosa_laevigata	RLG00000027749 RLG00000027825
rosa_multiflora	Rmu_sc0003333.1_g000008 Rmu_sc0007813.1_g000004 Rmu_ssc0000368.1_g000045
rosa_roxburghii	Rroxscaffold_4G00295440 Rroxscaffold_4G00296330
rosa_rugosa	Rorug01G0275400 Rorug01G0275500 Rorug01G0285400 Rorug01G0285500
rosa_samantha	Rh1AG289200 Rh1AG296800 Rh1BG254900 Rh1BG261100 Rh1CG272200 Rh1CG278400 Rh1DG284300 Rh1DG291100
rosa_wichuraiana	Rw0G002900 Rw1G025660 Rw1G026220

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	3 cut(s)	70, 529, 766
Acc16I	TGCGCA	1 cut(s)	681
Acc36I	ACCTGC	3 cut(s)	70, 529, 766
AccB7I	CCANNNNNTGG	2 cut(s)	719, 917
AccI	GTMKAC	1 cut(s)	837
AccII	CGCG	3 cut(s)	236, 291, 744
AciI	CCGC	8 cut(s)	11, 289, 291, 344, 580, 744, 764, 1127
AclWI	GGATC	3 cut(s)	754, 1069, 1095
AcsI	RAATTY	1 cut(s)	655
AcuI	CTGAAG	1 cut(s)	434
AfaI	GTAC	2 cut(s)	21, 483
AfiI	CCNNNNNNNGG	8 cut(s)	172, 589, 719, 743, 769, 917, 1019, 1058
AjnI	CCWGG	5 cut(s)	32, 810, 973, 1018, 1030
AjuI	GAANNNNNNNTTGG	2 cut(s)	295, 327
AleI	CACNNNNGTG	1 cut(s)	780
AloI	GAACNNNNNNTCC	2 cut(s)	344, 376
AluBI	AGCT	7 cut(s)	395, 463, 693, 734, 793, 908, 1212
AluI	AGCT	7 cut(s)	395, 463, 693, 734, 793, 908, 1212
Alw21I	GWGCWC	2 cut(s)	777, 925
Alw26I	GTCTC	2 cut(s)	181, 502
Alw44I	GTGCAC	1 cut(s)	921
AlwI	GGATC	3 cut(s)	754, 1069, 1095
AoxI	GGCC	3 cut(s)	40, 225, 1100
ApaLI	GTGCAC	1 cut(s)	921
ApeKI	GCWGC	2 cut(s)	103, 106
ApoI	RAATTY	1 cut(s)	655
AspLEI	GCGC	3 cut(s)	632, 682, 889
AspS9I	GGNCC	3 cut(s)	267, 486, 1036
AsuHPI	GGTGA	2 cut(s)	51, 249
AvaII	GGWCC	3 cut(s)	267, 486, 1036
AxyI	CCTNAGG	1 cut(s)	1077
BaeGI	GKGCMC	1 cut(s)	925
BanII	GRGCYC	2 cut(s)	205, 876
Bbv12I	GWGCWC	2 cut(s)	777, 925
BbvI	GCAGC	2 cut(s)	115, 118
BccI	CCATC	3 cut(s)	175, 599, 1017
BceAI	ACGGC	1 cut(s)	1115
BciT130I	CCWGG	5 cut(s)	34, 812, 975, 1020, 1032
BclI	TGATCA	1 cut(s)	1171
BcoDI	GTCTC	2 cut(s)	181, 502
BfaI	CTAG	2 cut(s)	38, 215
BfmI	CTRYAG	1 cut(s)	834
BfuAI	ACCTGC	3 cut(s)	70, 529, 766
BglI	GCCNNNNNGGC	1 cut(s)	34
BisI	GCNGC	2 cut(s)	104, 107
BlpI	GCTNAGC	1 cut(s)	459
BlsI	GCNGC	2 cut(s)	105, 108
Bme1390I	CCNGG	5 cut(s)	34, 812, 975, 1020, 1032
Bme18I	GGWCC	3 cut(s)	267, 486, 1036
BmgT120I	GGNCC	3 cut(s)	267, 486, 1036
BmiI	GGNNCC	5 cut(s)	269, 295, 873, 1037, 1038
BmrFI	CCNGG	5 cut(s)	34, 812, 975, 1020, 1032
BmrI	ACTGGG	3 cut(s)	379, 1034, 1049
BmsI	GCATC	2 cut(s)	691, 969
BmuI	ACTGGG	3 cut(s)	379, 1034, 1049
Bpu1102I	GCTNAGC	1 cut(s)	459
BpuEI	CTTGAG	3 cut(s)	368, 509, 1095
BsaI	GGTCTC	1 cut(s)	181
BsaJI	CCNNGG	4 cut(s)	289, 489, 974, 1031
Bsc4I	CCNNNNNNNGG	8 cut(s)	172, 589, 719, 743, 769, 917, 1019, 1058
Bse1I	ACTGG	5 cut(s)	385, 1040, 1055, 1070, 1164
Bse21I	CCTNAGG	1 cut(s)	1077
Bse3DI	GCAATG	1 cut(s)	1122
BseBI	CCWGG	5 cut(s)	34, 812, 975, 1020, 1032
BseDI	CCNNGG	4 cut(s)	289, 489, 974, 1031
BseGI	GGATG	6 cut(s)	499, 535, 607, 820, 984, 1028
BseLI	CCNNNNNNNGG	8 cut(s)	172, 589, 719, 743, 769, 917, 1019, 1058
BseMI	GCAATG	1 cut(s)	1122
BseMII	CTCAG	3 cut(s)	344, 662, 803
BseNI	ACTGG	5 cut(s)	385, 1040, 1055, 1070, 1164
BseRI	GAGGAG	2 cut(s)	726, 785
BseSI	GKGCMC	1 cut(s)	925
BseXI	GCAGC	2 cut(s)	115, 118
Bsh1236I	CGCG	3 cut(s)	236, 291, 744
BshFI	GGCC	3 cut(s)	42, 227, 1102
BsiHKAI	GWGCWC	2 cut(s)	777, 925
BslFI	GGGAC	3 cut(s)	253, 562, 1049
BslI	CCNNNNNNNGG	8 cut(s)	172, 589, 719, 743, 769, 917, 1019, 1058
BsmAI	GTCTC	2 cut(s)	181, 502
BsmFI	GGGAC	3 cut(s)	253, 562, 1049
BsmI	GAATGC	2 cut(s)	151, 284
BsnI	GGCC	3 cut(s)	42, 227, 1102
Bso31I	GGTCTC	1 cut(s)	181
Bsp1286I	GDGCHC	4 cut(s)	205, 777, 876, 925
Bsp1407I	TGTACA	1 cut(s)	19
Bsp143I	GATC	5 cut(s)	445, 746, 1061, 1087, 1171
Bsp1720I	GCTNAGC	1 cut(s)	459
BspACI	CCGC	8 cut(s)	11, 289, 291, 344, 580, 744, 764, 1127
BspANI	GGCC	3 cut(s)	42, 227, 1102
BspCNI	CTCAG	3 cut(s)	343, 661, 802
BspFNI	CGCG	3 cut(s)	236, 291, 744
BspLI	GGNNCC	5 cut(s)	269, 295, 873, 1037, 1038
BspMI	ACCTGC	3 cut(s)	70, 529, 766
BspPI	GGATC	3 cut(s)	754, 1069, 1095
BspQI	GCTCTTC	1 cut(s)	402
BspTNI	GGTCTC	1 cut(s)	181
BsrDI	GCAATG	1 cut(s)	1122
BsrGI	TGTACA	1 cut(s)	19
BsrI	ACTGG	5 cut(s)	385, 1040, 1055, 1070, 1164
BssECI	CCNNGG	4 cut(s)	289, 489, 974, 1031
BssMI	GATC	5 cut(s)	445, 746, 1061, 1087, 1171
BssT1I	CCWWGG	1 cut(s)	489
Bst2UI	CCWGG	5 cut(s)	34, 812, 975, 1020, 1032
Bst4CI	ACNGT	4 cut(s)	356, 486, 640, 835
Bst6I	CTCTTC	4 cut(s)	186, 402, 744, 1071
BstAUI	TGTACA	1 cut(s)	19
BstC8I	GCNNGC	2 cut(s)	30, 783
BstDEI	CTNAG	5 cut(s)	330, 459, 648, 789, 1077
BstDSI	CCRYGG	1 cut(s)	289
BstF5I	GGATG	6 cut(s)	499, 535, 607, 820, 984, 1028
BstFNI	CGCG	3 cut(s)	236, 291, 744
BstHHI	GCGC	3 cut(s)	632, 682, 889
BstKTI	GATC	5 cut(s)	448, 749, 1064, 1090, 1174
BstMAI	GTCTC	2 cut(s)	181, 502
BstMBI	GATC	5 cut(s)	445, 746, 1061, 1087, 1171
BstMWI	GCNNNNNNNGC	8 cut(s)	10, 34, 233, 731, 772, 905, 1099, 1126
BstNI	CCWGG	5 cut(s)	34, 812, 975, 1020, 1032
BstNSI	RCATGY	2 cut(s)	781, 1154
BstSCI	CCNGG	5 cut(s)	32, 810, 973, 1018, 1030
BstSFI	CTRYAG	1 cut(s)	834
BstSLI	GKGCMC	1 cut(s)	925
BstUI	CGCG	3 cut(s)	236, 291, 744
BstV1I	GCAGC	2 cut(s)	115, 118
BstX2I	RGATCY	1 cut(s)	1061
BstXI	CCANNNNNNTGG	1 cut(s)	1023
BstYI	RGATCY	1 cut(s)	1061
Bsu36I	CCTNAGG	1 cut(s)	1077
BsuRI	GGCC	3 cut(s)	42, 227, 1102
BtgI	CCRYGG	1 cut(s)	289
BtgZI	GCGATG	2 cut(s)	153, 1215
BtsCI	GGATG	6 cut(s)	499, 535, 607, 820, 984, 1028
BtsIMutI	CAGTG	2 cut(s)	1047, 1062
BveI	ACCTGC	3 cut(s)	70, 529, 766
Cac8I	GCNNGC	2 cut(s)	30, 783
CfoI	GCGC	3 cut(s)	632, 682, 889
Cfr13I	GGNCC	3 cut(s)	267, 486, 1036
Cfr42I	CCGCGG	1 cut(s)	292
CseI	GACGC	2 cut(s)	225, 464
Csp6I	GTAC	2 cut(s)	20, 482
CviAII	CATG	5 cut(s)	476, 627, 778, 868, 1151
CviQI	GTAC	2 cut(s)	20, 482
DdeI	CTNAG	5 cut(s)	330, 459, 648, 789, 1077
DpnI	GATC	5 cut(s)	447, 748, 1063, 1089, 1173
DpnII	GATC	5 cut(s)	445, 746, 1061, 1087, 1171
Eam1104I	CTCTTC	4 cut(s)	186, 402, 744, 1071
EarI	CTCTTC	4 cut(s)	186, 402, 744, 1071
Eco130I	CCWWGG	1 cut(s)	489
Eco147I	AGGCCT	1 cut(s)	42
Eco24I	GRGCYC	2 cut(s)	205, 876
Eco31I	GGTCTC	1 cut(s)	181
Eco47I	GGWCC	3 cut(s)	267, 486, 1036
Eco57I	CTGAAG	1 cut(s)	434
Eco81I	CCTNAGG	1 cut(s)	1077
EcoO109I	RGGNCCY	1 cut(s)	1036
EcoRII	CCWGG	5 cut(s)	32, 810, 973, 1018, 1030
EcoT14I	CCWWGG	1 cut(s)	489
EcoT22I	ATGCAT	3 cut(s)	286, 1122, 1152
EcoT38I	GRGCYC	2 cut(s)	205, 876
ErhI	CCWWGG	1 cut(s)	489
FaeI	CATG	5 cut(s)	479, 630, 781, 871, 1154
FalI	AAGNNNNNCTT	6 cut(s)	426, 458, 723, 755, 921, 953
FaqI	GGGAC	3 cut(s)	253, 562, 1049
FatI	CATG	5 cut(s)	475, 626, 777, 867, 1150
FauI	CCCGC	3 cut(s)	351, 587, 771
FauNDI	CATATG	1 cut(s)	676
FbaI	TGATCA	1 cut(s)	1171
FblI	GTMKAC	1 cut(s)	837
Fnu4HI	GCNGC	2 cut(s)	104, 107
FokI	GGATG	6 cut(s)	506, 542, 614, 827, 991, 1035
FriOI	GRGCYC	2 cut(s)	205, 876
Fsp4HI	GCNGC	2 cut(s)	104, 107
FspAI	RTGCGCAY	1 cut(s)	681
FspBI	CTAG	2 cut(s)	38, 215
FspI	TGCGCA	1 cut(s)	681
GlaI	GCGC	3 cut(s)	631, 681, 888
GluI	GCNGC	2 cut(s)	104, 107
HaeIII	GGCC	3 cut(s)	42, 227, 1102
HgaI	GACGC	2 cut(s)	225, 464
HhaI	GCGC	3 cut(s)	632, 682, 889
Hin1II	CATG	5 cut(s)	479, 630, 781, 871, 1154
Hin6I	GCGC	3 cut(s)	630, 680, 887
HinP1I	GCGC	3 cut(s)	630, 680, 887
HindIII	AAGCTT	1 cut(s)	1210
HinfI	GANTC	1 cut(s)	620
HphI	GGTGA	2 cut(s)	51, 249
Hpy166II	GTNNAC	3 cut(s)	390, 838, 923
Hpy188I	TCNGA	4 cut(s)	571, 613, 664, 687
Hpy188III	TCNNGA	3 cut(s)	452, 1169, 1175
Hpy8I	GTNNAC	3 cut(s)	390, 838, 923
HpyAV	CCTTC	6 cut(s)	120, 221, 307, 316, 369, 1199
HpyCH4III	ACNGT	4 cut(s)	356, 486, 640, 835
HpyCH4V	TGCA	7 cut(s)	284, 473, 707, 806, 923, 1120, 1150
HpyF10VI	GCNNNNNNNGC	8 cut(s)	10, 34, 233, 731, 772, 905, 1099, 1126
HpyF3I	CTNAG	5 cut(s)	330, 459, 648, 789, 1077
Hsp92II	CATG	5 cut(s)	479, 630, 781, 871, 1154
HspAI	GCGC	3 cut(s)	630, 680, 887
KflI	GGGWCCC	1 cut(s)	1036
Ksp22I	TGATCA	1 cut(s)	1171
KspI	CCGCGG	1 cut(s)	292
Kzo9I	GATC	5 cut(s)	445, 746, 1061, 1087, 1171
LguI	GCTCTTC	1 cut(s)	402
LmnI	GCTCC	4 cut(s)	739, 772, 871, 913
Lsp1109I	GCAGC	2 cut(s)	115, 118
LweI	GCATC	2 cut(s)	691, 969
MaeI	CTAG	2 cut(s)	38, 215
MaeIII	GTNAC	1 cut(s)	255
MalI	GATC	5 cut(s)	447, 748, 1063, 1089, 1173
MboI	GATC	5 cut(s)	445, 746, 1061, 1087, 1171
MfeI	CAATTG	1 cut(s)	855
MflI	RGATCY	1 cut(s)	1061
MhlI	GDGCHC	4 cut(s)	205, 777, 876, 925
MluCI	AATT	8 cut(s)	15, 55, 468, 596, 655, 799, 855, 954
MmeI	TCCRAC	1 cut(s)	947
Mph1103I	ATGCAT	3 cut(s)	286, 1122, 1152
MslI	CAYNNNNRTG	2 cut(s)	780, 1021
MspA1I	CMGCKG	1 cut(s)	291
MspR9I	CCNGG	5 cut(s)	34, 812, 975, 1020, 1032
MunI	CAATTG	1 cut(s)	855
Mva1269I	GAATGC	2 cut(s)	151, 284
MvaI	CCWGG	5 cut(s)	34, 812, 975, 1020, 1032
MvnI	CGCG	3 cut(s)	236, 291, 744
MwoI	GCNNNNNNNGC	8 cut(s)	10, 34, 233, 731, 772, 905, 1099, 1126
NdeI	CATATG	1 cut(s)	676
NdeII	GATC	5 cut(s)	445, 746, 1061, 1087, 1171
NlaIII	CATG	5 cut(s)	479, 630, 781, 871, 1154
NlaIV	GGNNCC	5 cut(s)	269, 295, 873, 1037, 1038
NmuCI	GTSAC	1 cut(s)	255
NsbI	TGCGCA	1 cut(s)	681
NsiI	ATGCAT	3 cut(s)	286, 1122, 1152
NspI	RCATGY	2 cut(s)	781, 1154
OliI	CACNNNNGTG	1 cut(s)	780
PaqCI	CACCTGC	3 cut(s)	70, 529, 766
PceI	AGGCCT	1 cut(s)	42
PciSI	GCTCTTC	1 cut(s)	402
PctI	GAATGC	2 cut(s)	151, 284
PfeI	GAWTC	1 cut(s)	620
PflMI	CCANNNNNTGG	2 cut(s)	719, 917
PkrI	GCNGC	2 cut(s)	105, 108
PpuMI	RGGWCCY	1 cut(s)	1036
Psp5II	RGGWCCY	1 cut(s)	1036
Psp6I	CCWGG	5 cut(s)	32, 810, 973, 1018, 1030
PspGI	CCWGG	5 cut(s)	32, 810, 973, 1018, 1030
PspN4I	GGNNCC	5 cut(s)	269, 295, 873, 1037, 1038
PspPI	GGNCC	3 cut(s)	267, 486, 1036
PspPPI	RGGWCCY	1 cut(s)	1036
PsuI	RGATCY	1 cut(s)	1061
RsaI	GTAC	2 cut(s)	21, 483
RsaNI	GTAC	2 cut(s)	20, 482
RseI	CAYNNNNRTG	2 cut(s)	780, 1021
SacII	CCGCGG	1 cut(s)	292
SapI	GCTCTTC	1 cut(s)	402
SatI	GCNGC	2 cut(s)	104, 107
Sau3AI	GATC	5 cut(s)	445, 746, 1061, 1087, 1171
Sau96I	GGNCC	3 cut(s)	267, 486, 1036
ScrFI	CCNGG	5 cut(s)	34, 812, 975, 1020, 1032
SduI	GDGCHC	4 cut(s)	205, 777, 876, 925
SfaNI	GCATC	2 cut(s)	691, 969
SfcI	CTRYAG	1 cut(s)	834
Sfr303I	CCGCGG	1 cut(s)	292
SgrBI	CCGCGG	1 cut(s)	292
SinI	GGWCC	3 cut(s)	267, 486, 1036
SmiMI	CAYNNNNRTG	2 cut(s)	780, 1021
SmlI	CTYRAG	3 cut(s)	347, 524, 1110
SmoI	CTYRAG	3 cut(s)	347, 524, 1110
Sse9I	AATT	8 cut(s)	15, 55, 468, 596, 655, 799, 855, 954
SseBI	AGGCCT	1 cut(s)	42
SsiI	CCGC	8 cut(s)	11, 289, 291, 344, 580, 744, 764, 1127
SspMI	CTAG	2 cut(s)	38, 215
StuI	AGGCCT	1 cut(s)	42
StyD4I	CCNGG	5 cut(s)	32, 810, 973, 1018, 1030
StyI	CCWWGG	1 cut(s)	489
TaaI	ACNGT	4 cut(s)	356, 486, 640, 835
TaqI	TCGA	2 cut(s)	47, 1083
TaqII	GACCGA	1 cut(s)	255
TasI	AATT	8 cut(s)	15, 55, 468, 596, 655, 799, 855, 954
TatI	WGTACW	1 cut(s)	19
TfiI	GAWTC	1 cut(s)	620
TscAI	CASTG	2 cut(s)	1047, 1062
TseFI	GTSAC	1 cut(s)	255
TseI	GCWGC	2 cut(s)	103, 106
Tsp45I	GTSAC	1 cut(s)	255
TspDTI	ATGAA	4 cut(s)	492, 615, 633, 1218
TspGWI	ACGGA	2 cut(s)	860, 948
TspRI	CASTG	2 cut(s)	1047, 1062
Van91I	CCANNNNNTGG	2 cut(s)	719, 917
VneI	GTGCAC	1 cut(s)	921
VpaK11BI	GGWCC	3 cut(s)	267, 486, 1036
XapI	RAATTY	1 cut(s)	655
XceI	RCATGY	2 cut(s)	781, 1154
XmiI	GTMKAC	1 cut(s)	837
XspI	CTAG	2 cut(s)	38, 215
Zsp2I	ATGCAT	3 cut(s)	286, 1122, 1152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.