Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0012113

Physical Location & Seq

Genomic Coordinates Reverse (-)

24367860 .. 24370119

Gene Structure 2260 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G211200.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 720 bp

ATGGCCGCCGCCGCACCGCCACCACCACCAAGCCCAGCCCCAGAGGCACCCAACGACGTGCCCCAAGGCTCGACCCCAAGGGGCCACCCACTCTTCGCCAGAATCCGCTTAGCCCACCCCACCGACGTCCCCCACATCCACAAGCTCATCCACCAGATGGCCGTCTTCGAACGCCTCTCCGACCAGTGCATCGCCACCGAGGCCTCTCTTTCCTCGACCCTCTTCACCTCCCCACCCTTCCAGTCCTTCACCATCTTCGTCCTCGAAGTCTCTCACACGCCTTTCGTCGAACACCTTCAGTACAACAACCCAGCCTACCCGCCCATCACCAAAGTCGTCAATCTGGACCTTCCGATTAACGACCCAGACCGCGATTTGTTCAGATCCAACGGTGGGGTTCTTGGCGGCGATGCCTGCGTTGCTGGGTTCGTGTTGTTTTTTCCAAACTACTCGACTTTTCTGGCGAAGCCTGGGTTTTACATAGAGGACCTGTTTGTGAGGGAGTGCTACAGGAGGAAAGGGCTTGGGAAGATGCTCCTTTCAGCTGTGGCTAAGCAGGCTGTGAAGATGGGGTATGGGAGAGTGGAGTGGGTTGTGCTTGACTGGAACGTGAATGCTATCAGGTTTTATGAGGAAATGGGTGCCAAGATCTTGCAGGAGTGGAGGATTTGCAGGCTCACTGGTGATGCTCTTAATGCTTATGTTAATGCCCAGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006591 GO:0006807 GO:0008080 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0010033 GO:0016407 GO:0016410 GO:0016740 GO:0016746 GO:0016747 GO:0019752 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0071704 GO:1901564 GO:1901605 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1

Protein Analysis

240

Amino Acids

26.59

Weight (kDa)

6.65

Isoelectric Point (pI)

52.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012113)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39020 AT2G39030
fragaria_vesca	FvH4_7g19050
malus_domestica	MD01G1105800.v1.1
prunus_persica	Prupe.2G211200_v2.0.a1 Prupe.2G211200_v2.0.a1 Prupe.2G211200_v2.0.a1
pyrus_communis	pycom01g13260
rosa_chinensis	RchiOBHm_Chr1g0362951
rosa_laevigata	RLG00000027608
rosa_multiflora	Rmu_sc0000174.1_g000011 Rmu_sc0012461.1_g000003
rosa_roxburghii	Rroxscaffold_4G00293610
rosa_rugosa	Rorug01G0302300
rosa_samantha	Rh1AG312000 Rh1BG275000 Rh1CG292300 Rh1DG305700
rosa_wichuraiana	Rw1G027640

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	129
AccB1I	GGYRCC	2 cut(s)	46, 641
AccB7I	CCANNNNNTGG	1 cut(s)	157
AccII	CGCG	1 cut(s)	372
AciI	CCGC	8 cut(s)	6, 9, 12, 17, 106, 320, 370, 405
AclWI	GGATC	1 cut(s)	378
AcoI	YGGCCR	2 cut(s)	3, 159
AcuI	CTGAAG	1 cut(s)	281
AcyI	GRCGYC	1 cut(s)	126
AfaI	GTAC	1 cut(s)	302
AfiI	CCNNNNNNNGG	2 cut(s)	157, 393
AjiI	CACGTC	1 cut(s)	58
AjnI	CCWGG	1 cut(s)	469
AluBI	AGCT	3 cut(s)	145, 545, 715
AluI	AGCT	3 cut(s)	145, 545, 715
Alw26I	GTCTC	1 cut(s)	274
AlwI	GGATC	1 cut(s)	378
AoxI	GGCC	4 cut(s)	3, 82, 159, 201
Asp700I	GAANNNNTTC	1 cut(s)	294
AspS9I	GGNCC	3 cut(s)	82, 346, 487
AsuHPI	GGTGA	4 cut(s)	217, 241, 319, 695
AsuII	TTCGAA	1 cut(s)	168
AvaII	GGWCC	2 cut(s)	346, 487
BaeGI	GKGCMC	1 cut(s)	63
BanI	GGYRCC	2 cut(s)	46, 641
BbsI	GAAGAC	1 cut(s)	157
BccI	CCATC	4 cut(s)	151, 260, 332, 562
BceAI	ACGGC	1 cut(s)	146
BciT130I	CCWGG	1 cut(s)	471
BcoDI	GTCTC	1 cut(s)	274
BfaI	CTAG	1 cut(s)	718
BfmI	CTRYAG	1 cut(s)	508
BglI	GCCNNNNNGGC	2 cut(s)	44, 200
BglII	AGATCT	1 cut(s)	648
BisI	GCNGC	4 cut(s)	6, 9, 12, 406
BlpI	GCTNAGC	2 cut(s)	109, 552
BlsI	GCNGC	4 cut(s)	7, 10, 13, 407
Bme1390I	CCNGG	1 cut(s)	471
Bme18I	GGWCC	2 cut(s)	346, 487
BmgBI	CACGTC	1 cut(s)	58
BmgT120I	GGNCC	3 cut(s)	82, 346, 487
BmiI	GGNNCC	3 cut(s)	48, 83, 643
BmrFI	CCNGG	1 cut(s)	471
BmsI	GCATC	4 cut(s)	198, 400, 522, 676
BpiI	GAAGAC	1 cut(s)	157
Bpu1102I	GCTNAGC	2 cut(s)	109, 552
Bpu14I	TTCGAA	1 cut(s)	168
BsaHI	GRCGYC	1 cut(s)	126
BsaJI	CCNNGG	4 cut(s)	64, 77, 198, 470
Bsc4I	CCNNNNNNNGG	2 cut(s)	157, 393
Bse1I	ACTGG	4 cut(s)	184, 241, 608, 685
BseBI	CCWGG	1 cut(s)	471
BseDI	CCNNGG	4 cut(s)	64, 77, 198, 470
BseGI	GGATG	2 cut(s)	135, 147
BseLI	CCNNNNNNNGG	2 cut(s)	157, 393
BseNI	ACTGG	4 cut(s)	184, 241, 608, 685
BseSI	GKGCMC	1 cut(s)	63
BseYI	CCCAGC	4 cut(s)	34, 310, 422, 711
Bsh1236I	CGCG	1 cut(s)	372
BshFI	GGCC	4 cut(s)	5, 84, 161, 203
BshNI	GGYRCC	2 cut(s)	46, 641
BslFI	GGGAC	1 cut(s)	113
BslI	CCNNNNNNNGG	2 cut(s)	157, 393
BsmAI	GTCTC	1 cut(s)	274
BsmFI	GGGAC	1 cut(s)	113
BsmI	GAATGC	1 cut(s)	619
BsnI	GGCC	4 cut(s)	5, 84, 161, 203
Bsp119I	TTCGAA	1 cut(s)	168
Bsp1286I	GDGCHC	1 cut(s)	63
Bsp143I	GATC	2 cut(s)	383, 648
Bsp1720I	GCTNAGC	2 cut(s)	109, 552
BspACI	CCGC	8 cut(s)	6, 9, 12, 17, 106, 320, 370, 405
BspANI	GGCC	4 cut(s)	5, 84, 161, 203
BspFNI	CGCG	1 cut(s)	372
BspLI	GGNNCC	3 cut(s)	48, 83, 643
BspPI	GGATC	1 cut(s)	378
BspT104I	TTCGAA	1 cut(s)	168
BspT107I	GGYRCC	2 cut(s)	46, 641
BsrI	ACTGG	4 cut(s)	184, 241, 608, 685
BssECI	CCNNGG	4 cut(s)	64, 77, 198, 470
BssMI	GATC	2 cut(s)	383, 648
BssNI	GRCGYC	1 cut(s)	126
BssT1I	CCWWGG	2 cut(s)	64, 77
Bst2UI	CCWGG	1 cut(s)	471
Bst4CI	ACNGT	1 cut(s)	392
Bst6I	CTCTTC	2 cut(s)	98, 227
BstACI	GRCGYC	1 cut(s)	126
BstBI	TTCGAA	1 cut(s)	168
BstC8I	GCNNGC	3 cut(s)	415, 558, 674
BstDEI	CTNAG	2 cut(s)	109, 552
BstF5I	GGATG	2 cut(s)	135, 147
BstFNI	CGCG	1 cut(s)	372
BstKTI	GATC	2 cut(s)	386, 651
BstMAI	GTCTC	1 cut(s)	274
BstMBI	GATC	2 cut(s)	383, 648
BstMWI	GCNNNNNNNGC	7 cut(s)	11, 44, 200, 414, 419, 557, 695
BstNI	CCWGG	1 cut(s)	471
BstSCI	CCNGG	1 cut(s)	469
BstSFI	CTRYAG	1 cut(s)	508
BstSLI	GKGCMC	1 cut(s)	63
BstUI	CGCG	1 cut(s)	372
BstV2I	GAAGAC	1 cut(s)	157
BstX2I	RGATCY	2 cut(s)	383, 648
BstYI	RGATCY	2 cut(s)	383, 648
BsuRI	GGCC	4 cut(s)	5, 84, 161, 203
BtgZI	GCGATG	2 cut(s)	175, 423
BtrI	CACGTC	1 cut(s)	58
BtsCI	GGATG	2 cut(s)	135, 147
BtsIMutI	CAGTG	2 cut(s)	191, 678
Cac8I	GCNNGC	3 cut(s)	415, 558, 674
Cfr13I	GGNCC	3 cut(s)	82, 346, 487
Csp6I	GTAC	1 cut(s)	301
CviQI	GTAC	1 cut(s)	301
DdeI	CTNAG	2 cut(s)	109, 552
DpnI	GATC	2 cut(s)	385, 650
DpnII	GATC	2 cut(s)	383, 648
EaeI	YGGCCR	2 cut(s)	3, 159
Eam1104I	CTCTTC	2 cut(s)	98, 227
EarI	CTCTTC	2 cut(s)	98, 227
Eco130I	CCWWGG	2 cut(s)	64, 77
Eco147I	AGGCCT	1 cut(s)	203
Eco47I	GGWCC	2 cut(s)	346, 487
Eco57I	CTGAAG	1 cut(s)	281
EcoO109I	RGGNCCY	1 cut(s)	487
EcoRII	CCWGG	1 cut(s)	469
EcoT14I	CCWWGG	2 cut(s)	64, 77
ErhI	CCWWGG	2 cut(s)	64, 77
FaiI	YATR	4 cut(s)	482, 576, 630, 702
FaqI	GGGAC	1 cut(s)	113
FauI	CCCGC	1 cut(s)	327
Fnu4HI	GCNGC	4 cut(s)	6, 9, 12, 406
FokI	GGATG	2 cut(s)	122, 134
Fsp4HI	GCNGC	4 cut(s)	6, 9, 12, 406
FspBI	CTAG	1 cut(s)	718
GluI	GCNGC	4 cut(s)	6, 9, 12, 406
GsaI	CCCAGC	4 cut(s)	38, 314, 426, 715
HaeIII	GGCC	4 cut(s)	5, 84, 161, 203
Hin1I	GRCGYC	1 cut(s)	126
HinfI	GANTC	1 cut(s)	102
HphI	GGTGA	4 cut(s)	217, 241, 319, 695
Hpy188I	TCNGA	3 cut(s)	181, 354, 383
Hpy188III	TCNNGA	1 cut(s)	344
Hpy99I	CGWCG	3 cut(s)	59, 128, 290
HpyAV	CCTTC	4 cut(s)	247, 256, 305, 359
HpyCH4III	ACNGT	1 cut(s)	392
HpyCH4IV	ACGT	3 cut(s)	57, 126, 609
HpyCH4V	TGCA	3 cut(s)	189, 655, 672
HpyF10VI	GCNNNNNNNGC	7 cut(s)	11, 44, 200, 414, 419, 557, 695
HpyF3I	CTNAG	2 cut(s)	109, 552
HpySE526I	ACGT	3 cut(s)	57, 126, 609
Hsp92I	GRCGYC	1 cut(s)	126
Kzo9I	GATC	2 cut(s)	383, 648
LmnI	GCTCC	1 cut(s)	540
LweI	GCATC	4 cut(s)	198, 400, 522, 676
MaeI	CTAG	1 cut(s)	718
MaeII	ACGT	3 cut(s)	57, 126, 609
MalI	GATC	2 cut(s)	385, 650
MboI	GATC	2 cut(s)	383, 648
MboII	GAAGA	6 cut(s)	85, 157, 214, 247, 541, 577
MflI	RGATCY	2 cut(s)	383, 648
MhlI	GDGCHC	1 cut(s)	63
MmeI	TCCRAC	2 cut(s)	204, 411
MroXI	GAANNNNTTC	1 cut(s)	294
MseI	TTAA	3 cut(s)	357, 693, 705
MspA1I	CMGCKG	1 cut(s)	545
MspR9I	CCNGG	1 cut(s)	471
Mva1269I	GAATGC	1 cut(s)	619
MvaI	CCWGG	1 cut(s)	471
MvnI	CGCG	1 cut(s)	372
MwoI	GCNNNNNNNGC	7 cut(s)	11, 44, 200, 414, 419, 557, 695
NdeII	GATC	2 cut(s)	383, 648
NlaIV	GGNNCC	3 cut(s)	48, 83, 643
NspV	TTCGAA	1 cut(s)	168
PceI	AGGCCT	1 cut(s)	203
PctI	GAATGC	1 cut(s)	619
PdmI	GAANNNNTTC	1 cut(s)	294
PfeI	GAWTC	1 cut(s)	102
PflMI	CCANNNNNTGG	1 cut(s)	157
PkrI	GCNGC	4 cut(s)	7, 10, 13, 407
PpuMI	RGGWCCY	1 cut(s)	487
Psp5II	RGGWCCY	1 cut(s)	487
Psp6I	CCWGG	1 cut(s)	469
PspFI	CCCAGC	4 cut(s)	34, 310, 422, 711
PspGI	CCWGG	1 cut(s)	469
PspN4I	GGNNCC	3 cut(s)	48, 83, 643
PspPI	GGNCC	3 cut(s)	82, 346, 487
PspPPI	RGGWCCY	1 cut(s)	487
PsuI	RGATCY	2 cut(s)	383, 648
PvuII	CAGCTG	1 cut(s)	545
RsaI	GTAC	1 cut(s)	302
RsaNI	GTAC	1 cut(s)	301
SaqAI	TTAA	3 cut(s)	357, 693, 705
SatI	GCNGC	4 cut(s)	6, 9, 12, 406
Sau3AI	GATC	2 cut(s)	383, 648
Sau96I	GGNCC	3 cut(s)	82, 346, 487
ScrFI	CCNGG	1 cut(s)	471
SduI	GDGCHC	1 cut(s)	63
SfaNI	GCATC	4 cut(s)	198, 400, 522, 676
SfcI	CTRYAG	1 cut(s)	508
SfuI	TTCGAA	1 cut(s)	168
SinI	GGWCC	2 cut(s)	346, 487
SseBI	AGGCCT	1 cut(s)	203
SsiI	CCGC	8 cut(s)	6, 9, 12, 17, 106, 320, 370, 405
SspMI	CTAG	1 cut(s)	718
StuI	AGGCCT	1 cut(s)	203
StyD4I	CCNGG	1 cut(s)	469
StyI	CCWWGG	2 cut(s)	64, 77
TaaI	ACNGT	1 cut(s)	392
TaiI	ACGT	3 cut(s)	60, 129, 612
TaqI	TCGA	6 cut(s)	71, 168, 215, 264, 288, 452
TatI	WGTACW	1 cut(s)	300
TauI	GCSGC	4 cut(s)	8, 11, 14, 408
TfiI	GAWTC	1 cut(s)	102
Tru1I	TTAA	3 cut(s)	357, 693, 705
Tru9I	TTAA	3 cut(s)	357, 693, 705
TscAI	CASTG	2 cut(s)	191, 685
TspRI	CASTG	2 cut(s)	191, 685
Van91I	CCANNNNNTGG	1 cut(s)	157
VpaK11BI	GGWCC	2 cut(s)	346, 487
XmnI	GAANNNNTTC	1 cut(s)	294
XspI	CTAG	1 cut(s)	718
ZraI	GACGTC	1 cut(s)	127

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.