Prupe.2G226500_v2.0.a1

Splicing factor 3B subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Reverse (-)
25289653 .. 25294773
5121 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G226500.2

Sequence Viewer

Length: 3639 bp
ATGTATCTTTACAGCCTCACTCTTCAGCGAGCGACGGGCATAGTCTGTGCCATCAATGGCAATTTCTCCGGCGGAAAGGCCCAAGAGATTGTCGTCGCCAGAGGCAAAGTTCTCGAACTTATTCGACCCGACGAAAATGGTAAGATCCAGACTCTACTCTCTGTTGAAATTTTTGGCGTCATTAGGTCTTTAGCTCAGTTTAGGCTCACTGGTTCTCAGAAAGACTATATTGTTGTTGGGTCCGATTCGGGTCGAATAGTAATTCTTGAGTATAACAAGGAAAAGAATGTCTTTGATAAAGTCCATCAAGAAACTTTCGGTAAGTCGGGTTGTCGCCGGATAGTTCCGGGCCAGTATTTGGCCATTGACCCCAAGGGGAGGGCTGTTATGGTTGGGGCCTGTGAAAAGCAGAAGCTTGTTTACGTTTTGAATAGGGATACATCTGCAAGGTTAACTATATCATCCCCCTTGGAGGCCCACAAGTCGCATACGATAGTGTATTCGATTTGTGGGGTTGATTGTGGGTTTGATAACCCCATATTTGCTGCCATTGAGTTGGATTATTCGGAAGCTGATCAGGACTCTACTGGGCAGGCGGCAAACGAGGCACAGAAGCATTTGACTTTCTACGAGCTCGACCTTGGGCTTAACCATGTCTCTAGGAAGTGGTCGGATCAGGTTGATAATGGTGCAAATTTACTGGTCACAGTTCCTGGAGGTGGGGATGGGCCAAGTGGCGTATTGGTCTGTGCGGAAAATTTTGTGATTTACAAGAATCAGGATAAACCGGATCTTAGGGCCGTGATTCCCAGGCGTGCAGATTTGCCAGCTGAGCGTGGGGTTCTTATAGTTTCAGCAGCTATGCACAAGCAGAAGTCAATGTTCTTTTTCCTTTTGCAGACAGAGTATGGGGATATATTTAAGGTTACTCTGGACCATGATAATGACAAGGTCTCAGAATTGAAGATCAAATATTTTGATACAATTCCAGTTACAACTTCAATGTGTGTGTTAAAATCTGGGTTTTTGTTTGCTGCGTCAGAGTTTGGGAATCACTCTTTGTACCAGTTCCGAGCAATAGGCGAAGATCCTGATGTGGAGTCTTCCTCAGCTACATTGATGGAAACTGAAGAAGGTTTCCAACCTTTGTTTTTCCAGCCTAGAAGACTTAAGAACCTTGTTAGGATTGATCAGGTTGAGAGCTTAATGCCGATAATGGATATGAAGGTCAATAATCTCTTTGAGGAAGAAACACCTCAAATATTTACACTTTGTGGGCGGGGCCCTCGTTCATCCCTCAGGATTCTAAGGCCCGGTTTAGCTATCAGTGAGATGGCTGTGTCAGAGCTTCCAGGTGTACCGAGTGCAGTCTGGACAGTGAAAAAGAATGTATCTGATGAGTTTGACGCATACATTGTGGTGTCATTTGCAAATGCTACCCTTGTGCTTTCAATTGGTGAGACAGTGGAAGAAGTTAGCGACAGTGGGTTTCTTGACACTACCCCATCACTTGCAGTTTCTTTGATAGGTGATGATTCTCTCATGCAAGTTCACCCAAATGGAATTAGGCATATTAGGGAAGATGGACGTATTAATGAATGGAGAACTCCTGGAAAGAGAACGATCGTCAAGGTTGGCTCTAATAGACTTCAAGTGGTTATTGCTTTGAGCGGCGGAGAACTTATATATTTTGAAGTTGATATGACGGGTCAATTGATGGAGGTGGAGAAGCATGAAATGTCTGGTGATGTAGCTTGTCTGGACATTGCCCCTGTACCTGAAGGGAGACAGAGATCTCGTTTCCTTGCAGTTGGTTCATATGACAACACTATTCGTATTTTGTCATTGGATCCTGATGACTGTATGCAGATTCTGAGTGTGCAAAGTGTTTCTTCAATTCCAGAATCTCTCCTATTTCTTGAGGTTCAGGCATCAATTGGTGGGGAGGATGGTGCTGATCATCCTGCCAGCCTTTTCCTTAATGCTGGTTTACGTACTGGGATTCTGTTCAGGACAGTGGTAGATATGGTGACAGGTCAGCTTTCTGATTCCCGTTCACGATTCTTAGGACTAAGAGCTCCGAAGCTATTTTCTGTTAGTGTGAGAGGCAAGCATGCTATGCTTTGTTTGTCAAGTCGGCCCTGGCTAGGTTATATTCATCAAGGACATTTTCTGTTAACACCCCTATCTTATGAGACACTTGAATATGCCGCATCATTTTCATCTGATCAATGTGCGGAAGGTGTAGTTGCTGTTGCTGGAAATGCTTTGAGGGTTTTTACTATTGAAAGGTTAGGAGAAACCTTTAACGAAACTGTGGTTCCACTGAGGTACACTCCCAGAAAGTTTGTTGTTCAACTCAAACGAAAGCTATTAGTAATTATTGAAAGTGATCAAGGAGCATTCACAGCAGAAGAGCGTGAAGCTGCAAAAAAGGAGTGCTTTGAGGCTGCAGGAATTGGTGAAAATGGAAATGGTAATGTGGATCAGATGGAAAATGGTGGTGATAATGAGGATGATCCCCTCTCCGATGAGCACTATGGCTATCCTAAGGCAGAGTCTGAGAAATGGGTTTCTTGCATTAGAGTTCTTGACCCCAAGACAGCAACTACAACTTGTCTGCTGGAGCTTCAGGATAATGAAGCTGCATTCAGTATATGCACAGTGAATTTCCACGATAAGGAGTATGGTACGCTTTTAGCTGTTGGTACAGCAAAGGGACTGCAGTTTTGGCCCAAAAGAAGTGTAACGGCAGGGTATATTCATATCTATAGATTTCTAGATGATGGAAAGTCCCTTGAACTTTTGCACAAGACACAAGTGGATGGTGTTCCTCTTGCTTTATGCCAGTTTCAGGGAAGATTACTAGCAGGCGTAGGACCAGTGCTCAGACTGTATGATTTGGGGAAAAAAAGATTGCTTAGAAAATGTGAGAATAAGCTGTTTCCCAACTCCATTATATCTATTCAAACCTATCGTGATAGGATTTACGTAGGTGACATTCAAGAGTCATTTCACTACTGCAAGTACAGACGAGATGAGAATCAGTTGTATATCTTTGCTGATGATTGTGTTCCAAGATGGCTTACAGCGTCATACCATATAGATTTTGACACCATGGCAGGTGCAGACAAGTTTGGAAATGTCTATTTTGTGCGGTTACCACAGGATGTTTCAGATGAGATAGAAGAGGATCCAACAGGTGGGAGGATAAAATGGGAGCAGGGGAAGTTGAACGGCGCTCCCAACAAAGTAGAGGAGATAGTGCAGTTTCATGTTGGTGATGTGGTCAGCTGTGTGCAGAAGGCATCTCTAATTCCAGGTGGTGGGGAATGCATCATCTATGGGACAGTGATGGGTAGCTTGGGTGCATTGCTTGCATTCACCTCTCGTGATGATGTTGACTTCTTTTCTCACCTGGAGATGTATATGAGGCAGGAGCATCCGCCCTTGTGTGGTAGAGATCACATGGCTTATAGATCAGCTTATTTTCCAGTTAAGGATGTGATTGATGGAGATCTGTGCGAGCAGTTCCCAACATTGCCTATGGATCTGCAGAGAAAAATTGCGGATGAGTTGGATAGAACTCCTGGAGAGATACTGAAGAAACTTGAGGAAATTCGAAATAAGATCATTTAA

Protein Analysis

1213

Amino Acids

134.74

Weight (kDa)

5.28

Isoelectric Point (pI)

35.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3113
Acc36I ACCTGC 1 cut(s) 3113
AccB7I CCANNNNNTGG 3 cut(s) 358, 3203, 3326
AccBSI CCGCTC 1 cut(s) 1671
AcoI YGGCCR 1 cut(s) 360
AcsI RAATTY 5 cut(s) 168, 694, 757, 2668, 3618
AcuI CTGAAG 5 cut(s) 8, 1149, 1800, 2615, 3623
AcyI GRCGYC 1 cut(s) 177
AdeI CACNNNGTG 1 cut(s) 1274
AfaI GTAC 8 cut(s) 1064, 1359, 1776, 1996, 2333, 2692, 2710, 3029
AflII CTTAAG 1 cut(s) 1169
AjnI CCWGG 8 cut(s) 712, 809, 1351, 1609, 2141, 3319, 3417, 3589
Alw21I GWGCWC 4 cut(s) 636, 2080, 2538, 2889
Alw26I GTCTC 5 cut(s) 661, 958, 1454, 1780, 2189
AlwNI CAGNNNCTG 3 cut(s) 713, 1873, 2561
ApaI GGGCCC 1 cut(s) 1286
ApeKI GCWGC 6 cut(s) 545, 857, 1034, 2426, 2450, 2645
ApoI RAATTY 5 cut(s) 168, 694, 757, 2668, 3618
ArsI GACNNNNNNTTYG 2 cut(s) 2712, 2744
AseI ATTAAT 1 cut(s) 1593
Asp700I GAANNNNTTC 1 cut(s) 120
AspLEI GCGC 1 cut(s) 3242
AsuC2I CCSGG 2 cut(s) 348, 1314
AsuII TTCGAA 1 cut(s) 3622
AvaII GGWCC 3 cut(s) 240, 934, 2879
AxyI CCTNAGG 2 cut(s) 1298, 2550
BaeGI GKGCMC 1 cut(s) 1286
BalI TGGCCA 1 cut(s) 362
BamHI GGATCC 2 cut(s) 1849, 3193
BanII GRGCYC 3 cut(s) 636, 1286, 2080
BarI GAAGNNNNNNTAC 2 cut(s) 404, 436
BauI CACGAG 1 cut(s) 3390
BbsI GAAGAC 2 cut(s) 1095, 1171
Bbv12I GWGCWC 4 cut(s) 636, 2080, 2538, 2889
BbvCI CCTCAGC 1 cut(s) 1108
BbvI GCAGC 6 cut(s) 532, 869, 1021, 2413, 2437, 2632
BceAI ACGGC 3 cut(s) 785, 2766, 3253
BcgI CGANNNNNNTGC 2 cut(s) 94, 128
BciT130I CCWGG 8 cut(s) 714, 811, 1353, 1611, 2143, 3321, 3419, 3591
BciVI GTATCC 1 cut(s) 430
BclI TGATCA 5 cut(s) 574, 1189, 1957, 2227, 2392
BcnI CCSGG 2 cut(s) 348, 1314
BcoDI GTCTC 5 cut(s) 661, 958, 1454, 1780, 2189
BfaI CTAG 5 cut(s) 660, 1161, 2147, 2780, 2867
BfmI CTRYAG 4 cut(s) 2451, 2723, 2770, 3554
BfoI RGCGCY 1 cut(s) 3243
BfrI CTTAAG 1 cut(s) 1169
BfuAI ACCTGC 1 cut(s) 3113
BfuI GTATCC 1 cut(s) 430
BglII AGATCT 2 cut(s) 1793, 3517
BisI GCNGC 9 cut(s) 546, 597, 858, 1035, 1672, 2211, 2427, 2451, 2646
BlpI GCTNAGC 1 cut(s) 831
BlsI GCNGC 9 cut(s) 547, 598, 859, 1036, 1673, 2212, 2428, 2452, 2647
Bme18I GGWCC 3 cut(s) 240, 934, 2879
BmiI GGNNCC 7 cut(s) 241, 397, 1283, 1284, 1851, 2322, 3195
BmrI ACTGGG 2 cut(s) 597, 2007
BmsI GCATC 5 cut(s) 1940, 2222, 3317, 3345, 3451
BmuI ACTGGG 2 cut(s) 597, 2007
BpiI GAAGAC 2 cut(s) 1095, 1171
BplI GAGNNNNNCTC 4 cut(s) 1091, 1123, 2320, 2352
BpmI CTGGAG 4 cut(s) 735, 2645, 3440, 3612
Bpu10I CCTNAGC 1 cut(s) 1108
Bpu1102I GCTNAGC 1 cut(s) 831
Bpu14I TTCGAA 1 cut(s) 3622
BpuEI CTTGAG 3 cut(s) 287, 1940, 3632
BpuMI CCSGG 2 cut(s) 348, 1314
BsaAI YACGTR 2 cut(s) 1994, 2992
BsaBI GATNNNNATC 2 cut(s) 3042, 3516
BsaHI GRCGYC 1 cut(s) 177
BsaI GGTCTC 1 cut(s) 958
BsaJI CCNNGG 6 cut(s) 372, 468, 640, 809, 2141, 3117
BsaWI WCCGGW 1 cut(s) 787
Bse21I CCTNAGG 2 cut(s) 1298, 2550
Bse3DI GCAATG 3 cut(s) 1764, 3371, 3539
Bse8I GATNNNNATC 2 cut(s) 3042, 3516
BseBI CCWGG 8 cut(s) 714, 811, 1353, 1611, 2143, 3321, 3419, 3591
BseDI CCNNGG 6 cut(s) 372, 468, 640, 809, 2141, 3117
BseJI GATNNNNATC 2 cut(s) 3042, 3516
BseMI GCAATG 3 cut(s) 1764, 3371, 3539
BseRI GAGGAG 1 cut(s) 3272
BseSI GKGCMC 1 cut(s) 1286
BseXI GCAGC 6 cut(s) 532, 869, 1021, 2413, 2437, 2632
BsgI GTGCAG 5 cut(s) 837, 1386, 3147, 3287, 3320
Bsh1285I CGRYCG 1 cut(s) 1626
BsiEI CGRYCG 1 cut(s) 1626
BsiHKAI GWGCWC 4 cut(s) 636, 2080, 2538, 2889
BsiSI CCGG 5 cut(s) 69, 337, 347, 788, 1314
BslFI GGGAC 3 cut(s) 2733, 2779, 3361
BsmAI GTCTC 5 cut(s) 661, 958, 1454, 1780, 2189
BsmFI GGGAC 3 cut(s) 2733, 2779, 3361
BsmI GAATGC 4 cut(s) 2402, 2648, 3338, 3380
Bso31I GGTCTC 1 cut(s) 958
Bsp119I TTCGAA 1 cut(s) 3622
Bsp120I GGGCCC 1 cut(s) 1282
Bsp1286I GDGCHC 5 cut(s) 636, 1286, 2080, 2538, 2889
Bsp1720I GCTNAGC 1 cut(s) 831
Bsp19I CCATGG 1 cut(s) 3117
BspLI GGNNCC 7 cut(s) 241, 397, 1283, 1284, 1851, 2322, 3195
BspMAI CTGCAG 3 cut(s) 2455, 2727, 3558
BspMI ACCTGC 1 cut(s) 3113
BspQI GCTCTTC 1 cut(s) 2409
BspT104I TTCGAA 1 cut(s) 3622
BspTI CTTAAG 1 cut(s) 1169
BspTNI GGTCTC 1 cut(s) 958
BsrBI CCGCTC 1 cut(s) 1671
BsrDI GCAATG 3 cut(s) 1764, 3371, 3539
BssECI CCNNGG 6 cut(s) 372, 468, 640, 809, 2141, 3117
BssNI GRCGYC 1 cut(s) 177
BssSI CACGAG 1 cut(s) 3390
BssT1I CCWWGG 4 cut(s) 372, 468, 640, 3117
Bst2BI CACGAG 1 cut(s) 3390
Bst2UI CCWGG 8 cut(s) 714, 811, 1353, 1611, 2143, 3321, 3419, 3591
Bst6I CTCTTC 3 cut(s) 27, 2409, 3183
BstACI GRCGYC 1 cut(s) 177
BstAFI CTTAAG 1 cut(s) 1169
BstAPI GCANNNNNTGC 2 cut(s) 2119, 3377
BstBAI YACGTR 2 cut(s) 1994, 2992
BstBI TTCGAA 1 cut(s) 3622
BstDSI CCRYGG 1 cut(s) 3117
BstEII GGTNACC 1 cut(s) 3159
BstH2I RGCGCY 1 cut(s) 3243
BstHHI GCGC 1 cut(s) 3242
BstMAI GTCTC 5 cut(s) 661, 958, 1454, 1780, 2189
BstMCI CGRYCG 1 cut(s) 1626
BstMWI GCNNNNNNNGC 7 cut(s) 605, 832, 2119, 2264, 2408, 2731, 3377
BstNI CCWGG 8 cut(s) 714, 811, 1353, 1611, 2143, 3321, 3419, 3591
BstNSI RCATGY 1 cut(s) 2117
BstPI GGTNACC 1 cut(s) 3159
BstSFI CTRYAG 4 cut(s) 2451, 2723, 2770, 3554
BstSLI GKGCMC 1 cut(s) 1286
BstSNI TACGTA 2 cut(s) 1994, 2992
BstV1I GCAGC 6 cut(s) 532, 869, 1021, 2413, 2437, 2632
BstV2I GAAGAC 2 cut(s) 1095, 1171
BstX2I RGATCY 8 cut(s) 144, 790, 1087, 1793, 1849, 3193, 3517, 3550
BstXI CCANNNNNNTGG 1 cut(s) 556
BstYI RGATCY 8 cut(s) 144, 790, 1087, 1793, 1849, 3193, 3517, 3550
Bsu36I CCTNAGG 2 cut(s) 1298, 2550
BsuI GTATCC 1 cut(s) 430
BtgI CCRYGG 1 cut(s) 3117
BveI ACCTGC 1 cut(s) 3113
CaiI CAGNNNCTG 3 cut(s) 713, 1873, 2561
CfoI GCGC 1 cut(s) 3242
CseI GACGC 4 cut(s) 166, 1026, 1415, 3081
Csp6I GTAC 8 cut(s) 1063, 1358, 1775, 1995, 2332, 2691, 2709, 3028
CviAII CATG 8 cut(s) 653, 938, 1543, 1733, 2114, 3118, 3275, 3469
CviQI GTAC 8 cut(s) 1063, 1358, 1775, 1995, 2332, 2691, 2709, 3028
DraIII CACNNNGTG 1 cut(s) 1274
EaeI YGGCCR 1 cut(s) 360
Eam1104I CTCTTC 3 cut(s) 27, 2409, 3183
EarI CTCTTC 3 cut(s) 27, 2409, 3183
EciI GGCGGA 3 cut(s) 87, 1689, 3435
Ecl136II GAGCTC 2 cut(s) 634, 2078
Eco105I TACGTA 2 cut(s) 1994, 2992
Eco130I CCWWGG 4 cut(s) 372, 468, 640, 3117
Eco24I GRGCYC 3 cut(s) 636, 1286, 2080
Eco31I GGTCTC 1 cut(s) 958
Eco47I GGWCC 3 cut(s) 240, 934, 2879
Eco53kI GAGCTC 2 cut(s) 634, 2078
Eco57I CTGAAG 5 cut(s) 8, 1149, 1800, 2615, 3623
Eco81I CCTNAGG 2 cut(s) 1298, 2550
Eco91I GGTNACC 1 cut(s) 3159
EcoICRI GAGCTC 2 cut(s) 634, 2078
EcoO109I RGGNCCY 3 cut(s) 396, 1282, 1283
EcoO65I GGTNACC 1 cut(s) 3159
EcoRII CCWGG 8 cut(s) 712, 809, 1351, 1609, 2141, 3319, 3417, 3589
EcoT14I CCWWGG 4 cut(s) 372, 468, 640, 3117
EcoT22I ATGCAT 1 cut(s) 3338
EcoT38I GRGCYC 3 cut(s) 636, 1286, 2080
ErhI CCWWGG 4 cut(s) 372, 468, 640, 3117
FaeI CATG 8 cut(s) 656, 941, 1546, 1736, 2117, 3121, 3278, 3472
FalI AAGNNNNNCTT 6 cut(s) 275, 307, 1876, 1908, 2426, 2458
FaqI GGGAC 3 cut(s) 2733, 2779, 3361
FatI CATG 8 cut(s) 652, 937, 1542, 1732, 2113, 3117, 3274, 3468
FauI CCCGC 1 cut(s) 1272
FauNDI CATATG 1 cut(s) 1819
FbaI TGATCA 5 cut(s) 574, 1189, 1957, 2227, 2392
Fnu4HI GCNGC 9 cut(s) 546, 597, 858, 1035, 1672, 2211, 2427, 2451, 2646
FriOI GRGCYC 3 cut(s) 636, 1286, 2080
Fsp4HI GCNGC 9 cut(s) 546, 597, 858, 1035, 1672, 2211, 2427, 2451, 2646
FspBI CTAG 5 cut(s) 660, 1161, 2147, 2780, 2867
GlaI GCGC 1 cut(s) 3241
GluI GCNGC 9 cut(s) 546, 597, 858, 1035, 1672, 2211, 2427, 2451, 2646
GsuI CTGGAG 4 cut(s) 735, 2645, 3440, 3612
HaeII RGCGCY 1 cut(s) 3243
HapII CCGG 5 cut(s) 69, 337, 347, 788, 1314
HgaI GACGC 4 cut(s) 166, 1026, 1415, 3081
HhaI GCGC 1 cut(s) 3242
Hin1I GRCGYC 1 cut(s) 177
Hin1II CATG 8 cut(s) 656, 941, 1546, 1736, 2117, 3121, 3278, 3472
Hin6I GCGC 1 cut(s) 3240
HinP1I GCGC 1 cut(s) 3240
HincII GTYRAC 3 cut(s) 453, 2178, 3403
HindII GTYRAC 3 cut(s) 453, 2178, 3403
HindIII AAGCTT 1 cut(s) 413
HpaI GTTAAC 2 cut(s) 453, 2178
HpaII CCGG 5 cut(s) 69, 337, 347, 788, 1314
Hpy166II GTNNAC 9 cut(s) 421, 453, 1358, 1552, 1991, 2057, 2178, 2334, 3403
Hpy8I GTNNAC 9 cut(s) 421, 453, 1358, 1552, 1991, 2057, 2178, 2334, 3403
Hpy99I CGWCG 3 cut(s) 37, 98, 134
HpyAV CCTTC 5 cut(s) 1127, 1219, 1775, 2234, 3298
HpyCH4IV ACGT 4 cut(s) 423, 1588, 1993, 2991
HpyF10VI GCNNNNNNNGC 7 cut(s) 605, 832, 2119, 2264, 2408, 2731, 3377
HpySE526I ACGT 4 cut(s) 423, 1588, 1993, 2991
Hsp92I GRCGYC 1 cut(s) 177
Hsp92II CATG 8 cut(s) 656, 941, 1546, 1736, 2117, 3121, 3278, 3472
HspAI GCGC 1 cut(s) 3240
Ksp22I TGATCA 5 cut(s) 574, 1189, 1957, 2227, 2392
KspAI GTTAAC 2 cut(s) 453, 2178
LguI GCTCTTC 1 cut(s) 2409
LmnI GCTCC 6 cut(s) 2083, 2399, 2626, 3220, 3247, 3439
Lsp1109I GCAGC 6 cut(s) 532, 869, 1021, 2413, 2437, 2632
LweI GCATC 5 cut(s) 1940, 2222, 3317, 3345, 3451
MaeI CTAG 5 cut(s) 660, 1161, 2147, 2780, 2867
MaeII ACGT 4 cut(s) 423, 1588, 1993, 2991
MaeIII GTNAC 7 cut(s) 703, 925, 991, 2029, 2746, 2996, 3159
MbiI CCGCTC 1 cut(s) 1671
MfeI CAATTG 3 cut(s) 1452, 1712, 1935
MflI RGATCY 8 cut(s) 144, 790, 1087, 1793, 1849, 3193, 3517, 3550
MhlI GDGCHC 5 cut(s) 636, 1286, 2080, 2538, 2889
MlsI TGGCCA 1 cut(s) 362
MluNI TGGCCA 1 cut(s) 362
MlyI GAGTC 5 cut(s) 145, 575, 1109, 2567, 3017
MmeI TCCRAC 5 cut(s) 537, 651, 1165, 3221, 3558
Mox20I TGGCCA 1 cut(s) 362
Mph1103I ATGCAT 1 cut(s) 3338
MroXI GAANNNNTTC 1 cut(s) 120
MscI TGGCCA 1 cut(s) 362
MslI CAYNNNNRTG 4 cut(s) 942, 1418, 1557, 3279
Msp20I TGGCCA 1 cut(s) 362
MspA1I CMGCKG 2 cut(s) 830, 3294
MspCI CTTAAG 1 cut(s) 1169
MspI CCGG 5 cut(s) 69, 337, 347, 788, 1314
MunI CAATTG 3 cut(s) 1452, 1712, 1935
Mva1269I GAATGC 4 cut(s) 2402, 2648, 3338, 3380
MvaI CCWGG 8 cut(s) 714, 811, 1353, 1611, 2143, 3321, 3419, 3591
MwoI GCNNNNNNNGC 7 cut(s) 605, 832, 2119, 2264, 2408, 2731, 3377
NciI CCSGG 2 cut(s) 348, 1314
NcoI CCATGG 1 cut(s) 3117
NdeI CATATG 1 cut(s) 1819
NlaIII CATG 8 cut(s) 656, 941, 1546, 1736, 2117, 3121, 3278, 3472
NlaIV GGNNCC 7 cut(s) 241, 397, 1283, 1284, 1851, 2322, 3195
NmuCI GTSAC 3 cut(s) 703, 2029, 2996
NsiI ATGCAT 1 cut(s) 3338
NspI RCATGY 1 cut(s) 2117
NspV TTCGAA 1 cut(s) 3622
PaeI GCATGC 1 cut(s) 2117
PaqCI CACCTGC 1 cut(s) 3113
PciSI GCTCTTC 1 cut(s) 2409
PctI GAATGC 4 cut(s) 2402, 2648, 3338, 3380
PdmI GAANNNNTTC 1 cut(s) 120
PflFI GACNNNGTC 1 cut(s) 950
PflMI CCANNNNNTGG 3 cut(s) 358, 3203, 3326
PfoI TCCNGGA 3 cut(s) 712, 1609, 3589
PkrI GCNGC 9 cut(s) 547, 598, 859, 1036, 1673, 2212, 2428, 2452, 2647
Ple19I CGATCG 1 cut(s) 1626
PleI GAGTC 5 cut(s) 145, 575, 1108, 2566, 3016
PpsI GAGTC 5 cut(s) 145, 575, 1108, 2566, 3016
Ppu21I YACGTR 2 cut(s) 1994, 2992
PshBI ATTAAT 1 cut(s) 1593
Psp124BI GAGCTC 2 cut(s) 636, 2080
Psp6I CCWGG 8 cut(s) 712, 809, 1351, 1609, 2141, 3319, 3417, 3589
PspEI GGTNACC 1 cut(s) 3159
PspGI CCWGG 8 cut(s) 712, 809, 1351, 1609, 2141, 3319, 3417, 3589
PspN4I GGNNCC 7 cut(s) 241, 397, 1283, 1284, 1851, 2322, 3195
PspOMI GGGCCC 1 cut(s) 1282
PstI CTGCAG 3 cut(s) 2455, 2727, 3558
PstNI CAGNNNCTG 3 cut(s) 713, 1873, 2561
PsuI RGATCY 8 cut(s) 144, 790, 1087, 1793, 1849, 3193, 3517, 3550
PsyI GACNNNGTC 1 cut(s) 950
PvuI CGATCG 1 cut(s) 1626
PvuII CAGCTG 2 cut(s) 830, 3294
RsaI GTAC 8 cut(s) 1064, 1359, 1776, 1996, 2333, 2692, 2710, 3029
RsaNI GTAC 8 cut(s) 1063, 1358, 1775, 1995, 2332, 2691, 2709, 3028
RseI CAYNNNNRTG 4 cut(s) 942, 1418, 1557, 3279
SacI GAGCTC 2 cut(s) 636, 2080
SapI GCTCTTC 1 cut(s) 2409
SatI GCNGC 9 cut(s) 546, 597, 858, 1035, 1672, 2211, 2427, 2451, 2646
SchI GAGTC 5 cut(s) 145, 575, 1109, 2567, 3017
SduI GDGCHC 5 cut(s) 636, 1286, 2080, 2538, 2889
SfaNI GCATC 5 cut(s) 1940, 2222, 3317, 3345, 3451
SfcI CTRYAG 4 cut(s) 2451, 2723, 2770, 3554
SfuI TTCGAA 1 cut(s) 3622
SinI GGWCC 3 cut(s) 240, 934, 2879
SmiMI CAYNNNNRTG 4 cut(s) 942, 1418, 1557, 3279
SmlI CTYRAG 4 cut(s) 266, 1169, 1919, 3611
SmoI CTYRAG 4 cut(s) 266, 1169, 1919, 3611
SnaBI TACGTA 2 cut(s) 1994, 2992
SphI GCATGC 1 cut(s) 2117
SspI AATATT 2 cut(s) 974, 1263
SspMI CTAG 5 cut(s) 660, 1161, 2147, 2780, 2867
SstI GAGCTC 2 cut(s) 636, 2080
StyI CCWWGG 4 cut(s) 372, 468, 640, 3117
TaiI ACGT 4 cut(s) 426, 1591, 1996, 2994
TaqI TCGA 6 cut(s) 114, 124, 253, 503, 636, 3622
TatI WGTACW 1 cut(s) 3027
TauI GCSGC 3 cut(s) 599, 1674, 2213
TseFI GTSAC 3 cut(s) 703, 2029, 2996
TseI GCWGC 6 cut(s) 545, 857, 1034, 2426, 2450, 2645
Tsp45I GTSAC 3 cut(s) 703, 2029, 2996
Tth111I GACNNNGTC 1 cut(s) 950
Van91I CCANNNNNTGG 3 cut(s) 358, 3203, 3326
Vha464I CTTAAG 1 cut(s) 1169
VpaK11BI GGWCC 3 cut(s) 240, 934, 2879
VspI ATTAAT 1 cut(s) 1593
XapI RAATTY 5 cut(s) 168, 694, 757, 2668, 3618
XbaI TCTAGA 1 cut(s) 2779
XceI RCATGY 1 cut(s) 2117
XmnI GAANNNNTTC 1 cut(s) 120
XspI CTAG 5 cut(s) 660, 1161, 2147, 2780, 2867
Zsp2I ATGCAT 1 cut(s) 3338
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.