Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0004744

Physical Location & Seq

Genomic Coordinates Forward (+)

44027721 .. 44030672

Gene Structure 2952 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0321300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1305 bp

ATGTCCTTCTCTGCCGCCACCACCCAGCCCCTCCGGCTCAACACCACCACCGCCGGCGCCGCTGCCAGATCCAATGACAAGGTACCCTCTTCTCTGCTGATGTCAAAGACTCCGTCTTTTTTGGGATCCACCCGCAAGCTCCGACCCGGTTGTGTAGCTGCCAAGCCCAATGCGCAGCGCCGATCCGCGGTGGTTTCGGTCTCCGAGGCTGTCAAGGAGAAGAAGGCCAGTGCTTCCACCAATCTGCTGATAACGAGAGAGGAAGGATTGGAGCTTTATGAAGACATGGTATTGGGTAGAGCTTTTGAGGACATGTGTGCTCAGATGTATTACAGAGGCAAAATGTTTGGGTTTGTTCACCTTTACAATGGCCAAGAAGCTGTGTCAACTGGGTTCATCAAGCTTACAAAGCAGGAAGATACTGTGGTGAGCACATACCGTGATCACGTTCACTCTTTGAGTAAGGGTGTCCCCGCTCGTGAAGTCATGAGTGAGCTCTTCGGAAAGGCTACCGGTTGTTGCCGGGGCCAAGGTGGTTCGATGCATATGTTCTCAAAAGACCACAATTTGATTGGTGGGTTTGCATTTATTGGTGAAGGGATTCCAGTGGCAACAGGAGCAGCCTTCAGCTCTAAATATAGGAGGGAAGTGTTGAAACAGGCAGACTGTGATCATGTGACGTTGGCATTTTTTGGAGATGGGACTGCTAACAATGGCCAGTTCTTTGAATGTTTGAACATGGCTGCATTATGGAAATTACCAATTGTATTTGTTGTGGAAAACAATTTGTGGGCTATTGGAATGTCGCACCTGAGGGCAACTTCTGATCCCGAAATTTGGAAGAAGGGACCTGCATTTGGTATGCCTGGTGTTCATGTGGATGGGATGGATGTTTTGAAGGTGAGGGAAGTGGCAAAGGAGGCAATTGGAAGGGCCCGGAGAGGAGAGGGACCAACCTTGGTGGAATGTGAAACATATAGGTTTAGAGGACACTCATTGGCTGATCCCGATGAGCTCCGTGACCCTGCTGAGAAGGCACACTATGCTGCCAGAGACCCCATCACAGCCTTGAAGAAATACATATTCGAGCACAACTTAGCCAGTGAACAAGAGCTGAAGGCCATAGATAAGAAGATAGATGAGGTGCTTGAGGATGCTGTTGAGTTCGCCGACGAGAGCCCGCTCCCACCTCGCAGCCAGCTGCTCGAGAATGTGTTTGCCGATCCTAAAGGCTTTGGAATAGGGCCTGATGGCCACTACAGATGTGAGGACCCTAAATTTACTCAGGGCACTGCCAAAGTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005689 GO:0005730 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009555 GO:0009791 GO:0009846 GO:0009856 GO:0009892 GO:0009894 GO:0009895 GO:0009908 GO:0009987 GO:0010467 GO:0010605 GO:0016070 GO:0016071 GO:0019222 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0035670 GO:0042176 GO:0042177 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044706 GO:0044877 GO:0046483 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051704 GO:0055046 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071005 GO:0071011 GO:0071013 GO:0071704 GO:0080090 GO:0090304 GO:0090567 GO:0097159 GO:0099402 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

CPSF_A MMS1_N

Protein Analysis

434

Amino Acids

47.58

Weight (kDa)

6.87

Isoelectric Point (pI)

37.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
E1_dh	PF00676	95 - 396	9.8e-83	Dehydrogenase E1 component

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004744)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55200 AT3G55200 AT3G55200 AT3G55220
fragaria_vesca	FvH4_1g28630
malus_domestica	MD01G1119800.v1.1 MD07G1189000.v1.1
prunus_persica	Prupe.2G226500_v2.0.a1 Prupe.2G226500_v2.0.a1
pyrus_communis	pycom07g17890
rosa_chinensis	RchiOBHm_Chr1g0365341 RchiOBHm_Chr3g0492631
rosa_laevigata	RLG00000022753 RLG00000027428
rosa_multiflora	Rmu_sc0000831.1_g000021 Rmu_sc0008527.1_g000001 Rmu_sc0010918.1_g000001
rosa_roxburghii	Rroxscaffold_4G00291290 Rroxscaffold_6G00392170
rosa_rugosa	Rorug01G0321300 Rorug03G0255200
rosa_samantha	Rh1AG330200 Rh1BG291700 Rh1CG308300 Rh1DG323400 Rh3AG305400 Rh3BG341900 Rh3CG339300 Rh3DG341200
rosa_wichuraiana	Rw1G029280 Rw3G026890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	174
Acc36I	ACCTGC	1 cut(s)	859
Acc65I	GGTACC	1 cut(s)	82
AccB1I	GGYRCC	2 cut(s)	56, 82
AccBSI	CCGCTC	2 cut(s)	476, 1183
AccII	CGCG	1 cut(s)	188
AciI	CCGC	8 cut(s)	15, 51, 60, 133, 186, 188, 474, 1181
AclWI	GGATC	7 cut(s)	63, 120, 133, 177, 821, 998, 1217
AcoI	YGGCCR	3 cut(s)	370, 715, 1252
AcsI	RAATTY	2 cut(s)	834, 1277
AcuI	CTGAAG	2 cut(s)	610, 1136
AcyI	GRCGYC	1 cut(s)	57
AfaI	GTAC	1 cut(s)	84
AfiI	CCNNNNNNNGG	3 cut(s)	187, 837, 857
AflIII	ACRYGT	1 cut(s)	312
AgeI	ACCGGT	1 cut(s)	512
AgsI	TTSAA	5 cut(s)	655, 728, 736, 898, 1072
AjnI	CCWGG	1 cut(s)	865
Alw21I	GWGCWC	5 cut(s)	322, 434, 498, 1017, 1092
Alw26I	GTCTC	2 cut(s)	205, 1047
AlwI	GGATC	7 cut(s)	63, 120, 133, 177, 821, 998, 1217
Ama87I	CYCGRG	1 cut(s)	1205
AoxI	GGCC	8 cut(s)	225, 370, 526, 715, 933, 1119, 1244, 1252
ApaI	GGGCCC	1 cut(s)	937
ApeKI	GCWGC	8 cut(s)	62, 158, 175, 620, 743, 1046, 1194, 1201
ApoI	RAATTY	2 cut(s)	834, 1277
ArsI	GACNNNNNNTTYG	2 cut(s)	98, 130
AsiGI	ACCGGT	1 cut(s)	512
Asp700I	GAANNNNTTC	1 cut(s)	600
Asp718I	GGTACC	1 cut(s)	82
AspLEI	GCGC	3 cut(s)	59, 175, 180
AspS9I	GGNCC	7 cut(s)	526, 848, 933, 934, 950, 1244, 1270
AsuC2I	CCSGG	3 cut(s)	147, 524, 937
AsuHPI	GGTGA	4 cut(s)	350, 439, 605, 913
AvaI	CYCGRG	1 cut(s)	1205
AvaII	GGWCC	3 cut(s)	848, 950, 1270
AxyI	CCTNAGG	1 cut(s)	812
BaeGI	GKGCMC	2 cut(s)	937, 1292
BaeI	ACNNNNGTAYC	2 cut(s)	411, 444
BalI	TGGCCA	3 cut(s)	372, 717, 1254
BamHI	GGATCC	1 cut(s)	125
BanI	GGYRCC	2 cut(s)	56, 82
BanII	GRGCYC	4 cut(s)	498, 937, 1017, 1181
BauI	CACGAG	1 cut(s)	477
BbsI	GAAGAC	1 cut(s)	288
Bbv12I	GWGCWC	5 cut(s)	322, 434, 498, 1017, 1092
BbvI	GCAGC	8 cut(s)	49, 145, 187, 632, 730, 1033, 1188, 1206
BccI	CCATC	5 cut(s)	692, 875, 880, 1067, 1244
BciT130I	CCWGG	1 cut(s)	867
BclI	TGATCA	2 cut(s)	442, 670
BcnI	CCSGG	3 cut(s)	147, 524, 937
BcoDI	GTCTC	2 cut(s)	205, 1047
BfmI	CTRYAG	1 cut(s)	1258
BfoI	RGCGCY	2 cut(s)	60, 181
BfuAI	ACCTGC	1 cut(s)	859
BglI	GCCNNNNNGGC	1 cut(s)	34
Bme1390I	CCNGG	4 cut(s)	147, 524, 867, 937
Bme18I	GGWCC	3 cut(s)	848, 950, 1270
BmeT110I	CYCGRG	1 cut(s)	1205
BmgT120I	GGNCC	7 cut(s)	526, 848, 933, 934, 950, 1244, 1270
BmiI	GGNNCC	8 cut(s)	58, 84, 127, 527, 849, 935, 951, 1272
BmrFI	CCNGG	4 cut(s)	147, 524, 867, 937
BmrI	ACTGGG	1 cut(s)	399
BmsI	GCATC	2 cut(s)	531, 1144
BmuI	ACTGGG	1 cut(s)	399
BpiI	GAAGAC	1 cut(s)	288
BpuEI	CTTGAG	1 cut(s)	1169
BpuMI	CCSGG	3 cut(s)	147, 524, 937
BsaHI	GRCGYC	1 cut(s)	57
BsaI	GGTCTC	2 cut(s)	205, 1047
BsaJI	CCNNGG	5 cut(s)	186, 204, 523, 529, 957
BsaWI	WCCGGW	1 cut(s)	512
Bsc4I	CCNNNNNNNGG	3 cut(s)	187, 837, 857
Bse118I	RCCGGY	2 cut(s)	53, 512
Bse1I	ACTGG	5 cut(s)	228, 394, 605, 718, 1101
Bse21I	CCTNAGG	1 cut(s)	812
BseBI	CCWGG	1 cut(s)	867
BseDI	CCNNGG	5 cut(s)	186, 204, 523, 529, 957
BseGI	GGATG	4 cut(s)	886, 891, 895, 1159
BseLI	CCNNNNNNNGG	3 cut(s)	187, 837, 857
BseMII	CTCAG	4 cut(s)	335, 803, 1020, 1298
BseNI	ACTGG	5 cut(s)	228, 394, 605, 718, 1101
BseRI	GAGGAG	1 cut(s)	957
BseSI	GKGCMC	2 cut(s)	937, 1292
BseXI	GCAGC	8 cut(s)	49, 145, 187, 632, 730, 1033, 1188, 1206
BseYI	CCCAGC	1 cut(s)	24
Bsh1236I	CGCG	1 cut(s)	188
BshFI	GGCC	8 cut(s)	227, 372, 528, 717, 935, 1121, 1246, 1254
BshNI	GGYRCC	2 cut(s)	56, 82
BshTI	ACCGGT	1 cut(s)	512
BsiHKAI	GWGCWC	5 cut(s)	322, 434, 498, 1017, 1092
BsiHKCI	CYCGRG	1 cut(s)	1205
BsiSI	CCGG	6 cut(s)	34, 54, 147, 513, 523, 937
BslFI	GGGAC	4 cut(s)	455, 715, 861, 963
BslI	CCNNNNNNNGG	3 cut(s)	187, 837, 857
BsmAI	GTCTC	2 cut(s)	205, 1047
BsmFI	GGGAC	4 cut(s)	455, 715, 861, 963
BsnI	GGCC	8 cut(s)	227, 372, 528, 717, 935, 1121, 1246, 1254
Bso31I	GGTCTC	2 cut(s)	205, 1047
BsoBI	CYCGRG	1 cut(s)	1205
Bsp120I	GGGCCC	1 cut(s)	933
Bsp1286I	GDGCHC	8 cut(s)	322, 434, 498, 937, 1017, 1092, 1181, 1292
Bsp143I	GATC	8 cut(s)	68, 125, 182, 442, 670, 826, 1003, 1222
BspACI	CCGC	8 cut(s)	15, 51, 60, 133, 186, 188, 474, 1181
BspANI	GGCC	8 cut(s)	227, 372, 528, 717, 935, 1121, 1246, 1254
BspCNI	CTCAG	4 cut(s)	334, 804, 1021, 1297
BspFNI	CGCG	1 cut(s)	188
BspHI	TCATGA	1 cut(s)	486
BspLI	GGNNCC	8 cut(s)	58, 84, 127, 527, 849, 935, 951, 1272
BspMI	ACCTGC	1 cut(s)	859
BspPI	GGATC	7 cut(s)	63, 120, 133, 177, 821, 998, 1217
BspQI	GCTCTTC	1 cut(s)	503
BspT107I	GGYRCC	2 cut(s)	56, 82
BspTNI	GGTCTC	2 cut(s)	205, 1047
BsrBI	CCGCTC	2 cut(s)	476, 1183
BsrFI	RCCGGY	2 cut(s)	53, 512
BsrI	ACTGG	5 cut(s)	228, 394, 605, 718, 1101
BssAI	RCCGGY	2 cut(s)	53, 512
BssECI	CCNNGG	5 cut(s)	186, 204, 523, 529, 957
BssMI	GATC	8 cut(s)	68, 125, 182, 442, 670, 826, 1003, 1222
BssNI	GRCGYC	1 cut(s)	57
BssSI	CACGAG	1 cut(s)	477
BssT1I	CCWWGG	2 cut(s)	529, 957
Bst2BI	CACGAG	1 cut(s)	477
Bst2UI	CCWGG	1 cut(s)	867
Bst4CI	ACNGT	3 cut(s)	424, 440, 668
Bst6I	CTCTTC	2 cut(s)	94, 503
BstACI	GRCGYC	1 cut(s)	57
BstAPI	GCANNNNNTGC	1 cut(s)	1043
BstC8I	GCNNGC	4 cut(s)	55, 137, 1181, 1199
BstDEI	CTNAG	5 cut(s)	321, 812, 1029, 1096, 1284
BstDSI	CCRYGG	1 cut(s)	186
BstF5I	GGATG	4 cut(s)	886, 891, 895, 1159
BstFNI	CGCG	1 cut(s)	188
BstH2I	RGCGCY	2 cut(s)	60, 181
BstHHI	GCGC	3 cut(s)	59, 175, 180
BstKTI	GATC	8 cut(s)	71, 128, 185, 445, 673, 829, 1006, 1225
BstMAI	GTCTC	2 cut(s)	205, 1047
BstMBI	GATC	8 cut(s)	68, 125, 182, 442, 670, 826, 1003, 1222
BstMWI	GCNNNNNNNGC	8 cut(s)	34, 59, 172, 409, 617, 920, 1034, 1043
BstNI	CCWGG	1 cut(s)	867
BstNSI	RCATGY	1 cut(s)	316
BstSCI	CCNGG	4 cut(s)	145, 522, 865, 935
BstSFI	CTRYAG	1 cut(s)	1258
BstSLI	GKGCMC	2 cut(s)	937, 1292
BstUI	CGCG	1 cut(s)	188
BstV1I	GCAGC	8 cut(s)	49, 145, 187, 632, 730, 1033, 1188, 1206
BstV2I	GAAGAC	1 cut(s)	288
BstX2I	RGATCY	2 cut(s)	68, 125
BstYI	RGATCY	2 cut(s)	68, 125
Bsu36I	CCTNAGG	1 cut(s)	812
BsuRI	GGCC	8 cut(s)	227, 372, 528, 717, 935, 1121, 1246, 1254
BtgI	CCRYGG	1 cut(s)	186
BtsCI	GGATG	4 cut(s)	886, 891, 895, 1159
BtsI	GCAGTG	1 cut(s)	1290
BtsIMutI	CAGTG	4 cut(s)	235, 612, 1108, 1290
BveI	ACCTGC	1 cut(s)	859
Cac8I	GCNNGC	4 cut(s)	55, 137, 1181, 1199
CciI	TCATGA	1 cut(s)	486
CfoI	GCGC	3 cut(s)	59, 175, 180
Cfr10I	RCCGGY	2 cut(s)	53, 512
Cfr13I	GGNCC	7 cut(s)	526, 848, 933, 934, 950, 1244, 1270
Cfr42I	CCGCGG	1 cut(s)	189
Csp6I	GTAC	1 cut(s)	83
CspAI	ACCGGT	1 cut(s)	512
CspCI	CAANNNNNGTGG	2 cut(s)	942, 977
CviAII	CATG	6 cut(s)	286, 313, 487, 674, 739, 875
CviQI	GTAC	1 cut(s)	83
DdeI	CTNAG	5 cut(s)	321, 812, 1029, 1096, 1284
DinI	GGCGCC	1 cut(s)	58
DpnI	GATC	8 cut(s)	70, 127, 184, 444, 672, 828, 1005, 1224
DpnII	GATC	8 cut(s)	68, 125, 182, 442, 670, 826, 1003, 1222
EaeI	YGGCCR	3 cut(s)	370, 715, 1252
Eam1104I	CTCTTC	2 cut(s)	94, 503
EarI	CTCTTC	2 cut(s)	94, 503
Ecl136II	GAGCTC	2 cut(s)	496, 1015
Eco130I	CCWWGG	2 cut(s)	529, 957
Eco24I	GRGCYC	4 cut(s)	498, 937, 1017, 1181
Eco31I	GGTCTC	2 cut(s)	205, 1047
Eco47I	GGWCC	3 cut(s)	848, 950, 1270
Eco53kI	GAGCTC	2 cut(s)	496, 1015
Eco57I	CTGAAG	2 cut(s)	610, 1136
Eco81I	CCTNAGG	1 cut(s)	812
Eco88I	CYCGRG	1 cut(s)	1205
EcoICRI	GAGCTC	2 cut(s)	496, 1015
EcoO109I	RGGNCCY	4 cut(s)	848, 933, 1244, 1270
EcoRII	CCWGG	1 cut(s)	865
EcoT14I	CCWWGG	2 cut(s)	529, 957
EcoT22I	ATGCAT	1 cut(s)	546
EcoT38I	GRGCYC	4 cut(s)	498, 937, 1017, 1181
EgeI	GGCGCC	1 cut(s)	58
EheI	GGCGCC	1 cut(s)	58
ErhI	CCWWGG	2 cut(s)	529, 957
FaeI	CATG	6 cut(s)	289, 316, 490, 677, 742, 878
FaqI	GGGAC	4 cut(s)	455, 715, 861, 963
FatI	CATG	6 cut(s)	285, 312, 486, 673, 738, 874
FauI	CCCGC	3 cut(s)	140, 481, 1188
FauNDI	CATATG	1 cut(s)	546
FbaI	TGATCA	2 cut(s)	442, 670
FokI	GGATG	4 cut(s)	893, 898, 902, 1166
FriOI	GRGCYC	4 cut(s)	498, 937, 1017, 1181
FspI	TGCGCA	1 cut(s)	174
GlaI	GCGC	3 cut(s)	58, 174, 179
GsaI	CCCAGC	1 cut(s)	28
HaeII	RGCGCY	2 cut(s)	60, 181
HaeIII	GGCC	8 cut(s)	227, 372, 528, 717, 935, 1121, 1246, 1254
HapII	CCGG	6 cut(s)	34, 54, 147, 513, 523, 937
HhaI	GCGC	3 cut(s)	59, 175, 180
Hin1I	GRCGYC	1 cut(s)	57
Hin1II	CATG	6 cut(s)	289, 316, 490, 677, 742, 878
Hin6I	GCGC	3 cut(s)	57, 173, 178
HinP1I	GCGC	3 cut(s)	57, 173, 178
HincII	GTYRAC	1 cut(s)	387
HindII	GTYRAC	1 cut(s)	387
HindIII	AAGCTT	1 cut(s)	401
HinfI	GANTC	2 cut(s)	109, 601
HpaII	CCGG	6 cut(s)	34, 54, 147, 513, 523, 937
HphI	GGTGA	4 cut(s)	350, 439, 605, 913
Hpy166II	GTNNAC	4 cut(s)	358, 387, 451, 1106
Hpy188I	TCNGA	5 cut(s)	143, 205, 324, 503, 826
Hpy188III	TCNNGA	5 cut(s)	479, 487, 830, 1007, 1207
Hpy8I	GTNNAC	4 cut(s)	358, 387, 451, 1106
Hpy99I	CGWCG	1 cut(s)	1175
HpyCH4III	ACNGT	3 cut(s)	424, 440, 668
HpyCH4IV	ACGT	2 cut(s)	447, 680
HpyCH4V	TGCA	4 cut(s)	544, 584, 746, 854
HpyF10VI	GCNNNNNNNGC	8 cut(s)	34, 59, 172, 409, 617, 920, 1034, 1043
HpyF3I	CTNAG	5 cut(s)	321, 812, 1029, 1096, 1284
HpySE526I	ACGT	2 cut(s)	447, 680
Hsp92I	GRCGYC	1 cut(s)	57
Hsp92II	CATG	6 cut(s)	289, 316, 490, 677, 742, 878
HspAI	GCGC	3 cut(s)	57, 173, 178
KasI	GGCGCC	1 cut(s)	56
KpnI	GGTACC	1 cut(s)	86
KroI	GCCGGC	1 cut(s)	53
KroNI	GCCGGC	1 cut(s)	55
Ksp22I	TGATCA	2 cut(s)	442, 670
KspI	CCGCGG	1 cut(s)	189
Kzo9I	GATC	8 cut(s)	68, 125, 182, 442, 670, 826, 1003, 1222
LguI	GCTCTTC	1 cut(s)	503
LmnI	GCTCC	5 cut(s)	144, 271, 617, 1020, 1188
Lsp1109I	GCAGC	8 cut(s)	49, 145, 187, 632, 730, 1033, 1188, 1206
LweI	GCATC	2 cut(s)	531, 1144
MaeII	ACGT	2 cut(s)	447, 680
MaeIII	GTNAC	2 cut(s)	676, 1019
MalI	GATC	8 cut(s)	70, 127, 184, 444, 672, 828, 1005, 1224
MbiI	CCGCTC	2 cut(s)	476, 1183
MboI	GATC	8 cut(s)	68, 125, 182, 442, 670, 826, 1003, 1222
MboII	GAAGA	8 cut(s)	81, 232, 293, 428, 490, 853, 1084, 1144
MfeI	CAATTG	2 cut(s)	762, 924
MflI	RGATCY	2 cut(s)	68, 125
MhlI	GDGCHC	8 cut(s)	322, 434, 498, 937, 1017, 1092, 1181, 1292
MlsI	TGGCCA	3 cut(s)	372, 717, 1254
MluCI	AATT	7 cut(s)	565, 755, 762, 784, 834, 924, 1277
MluNI	TGGCCA	3 cut(s)	372, 717, 1254
Mly113I	GGCGCC	1 cut(s)	57
MlyI	GAGTC	1 cut(s)	103
MmeI	TCCRAC	1 cut(s)	166
Mox20I	TGGCCA	3 cut(s)	372, 717, 1254
Mph1103I	ATGCAT	1 cut(s)	546
MreI	CGCCGGCG	1 cut(s)	53
MroNI	GCCGGC	1 cut(s)	53
MroXI	GAANNNNTTC	1 cut(s)	600
MscI	TGGCCA	3 cut(s)	372, 717, 1254
MslI	CAYNNNNRTG	1 cut(s)	879
Msp20I	TGGCCA	3 cut(s)	372, 717, 1254
MspA1I	CMGCKG	3 cut(s)	62, 188, 1201
MspI	CCGG	6 cut(s)	34, 54, 147, 513, 523, 937
MspR9I	CCNGG	4 cut(s)	147, 524, 867, 937
MteI	GCGCNGCGC	1 cut(s)	176
MunI	CAATTG	2 cut(s)	762, 924
MvaI	CCWGG	1 cut(s)	867
MvnI	CGCG	1 cut(s)	188
MwoI	GCNNNNNNNGC	8 cut(s)	34, 59, 172, 409, 617, 920, 1034, 1043
NaeI	GCCGGC	1 cut(s)	55
NarI	GGCGCC	1 cut(s)	57
NciI	CCSGG	3 cut(s)	147, 524, 937
NdeI	CATATG	1 cut(s)	546
NdeII	GATC	8 cut(s)	68, 125, 182, 442, 670, 826, 1003, 1222
NgoMIV	GCCGGC	1 cut(s)	53
NlaIII	CATG	6 cut(s)	289, 316, 490, 677, 742, 878
NlaIV	GGNNCC	8 cut(s)	58, 84, 127, 527, 849, 935, 951, 1272
NmuCI	GTSAC	2 cut(s)	676, 1019
NsbI	TGCGCA	1 cut(s)	174
NsiI	ATGCAT	1 cut(s)	546
NspI	RCATGY	1 cut(s)	316
PaeR7I	CTCGAG	1 cut(s)	1205
PagI	TCATGA	1 cut(s)	486
PciI	ACATGT	1 cut(s)	312
PciSI	GCTCTTC	1 cut(s)	503
PdiI	GCCGGC	1 cut(s)	55
PdmI	GAANNNNTTC	1 cut(s)	600
PfeI	GAWTC	1 cut(s)	601
PflFI	GACNNNGTC	1 cut(s)	112
PinAI	ACCGGT	1 cut(s)	512
PleI	GAGTC	1 cut(s)	103
PluTI	GGCGCC	1 cut(s)	60
PpsI	GAGTC	1 cut(s)	103
PpuMI	RGGWCCY	2 cut(s)	848, 1270
PscI	ACATGT	1 cut(s)	312
Psp124BI	GAGCTC	2 cut(s)	498, 1017
Psp5II	RGGWCCY	2 cut(s)	848, 1270
Psp6I	CCWGG	1 cut(s)	865
PspFI	CCCAGC	1 cut(s)	24
PspGI	CCWGG	1 cut(s)	865
PspN4I	GGNNCC	8 cut(s)	58, 84, 127, 527, 849, 935, 951, 1272
PspOMI	GGGCCC	1 cut(s)	933
PspPI	GGNCC	7 cut(s)	526, 848, 933, 934, 950, 1244, 1270
PspPPI	RGGWCCY	2 cut(s)	848, 1270
PsuI	RGATCY	2 cut(s)	68, 125
PsyI	GACNNNGTC	1 cut(s)	112
PvuII	CAGCTG	1 cut(s)	1201
RsaI	GTAC	1 cut(s)	84
RsaNI	GTAC	1 cut(s)	83
RseI	CAYNNNNRTG	1 cut(s)	879
SacI	GAGCTC	2 cut(s)	498, 1017
SacII	CCGCGG	1 cut(s)	189
SapI	GCTCTTC	1 cut(s)	503
Sau3AI	GATC	8 cut(s)	68, 125, 182, 442, 670, 826, 1003, 1222
Sau96I	GGNCC	7 cut(s)	526, 848, 933, 934, 950, 1244, 1270
SchI	GAGTC	1 cut(s)	103
ScrFI	CCNGG	4 cut(s)	147, 524, 867, 937
SduI	GDGCHC	8 cut(s)	322, 434, 498, 937, 1017, 1092, 1181, 1292
SfaNI	GCATC	2 cut(s)	531, 1144
SfcI	CTRYAG	1 cut(s)	1258
SfoI	GGCGCC	1 cut(s)	58
Sfr274I	CTCGAG	1 cut(s)	1205
Sfr303I	CCGCGG	1 cut(s)	189
SgrAI	CRCCGGYG	1 cut(s)	53
SgrBI	CCGCGG	1 cut(s)	189
SinI	GGWCC	3 cut(s)	848, 950, 1270
SlaI	CTCGAG	1 cut(s)	1205
SmiMI	CAYNNNNRTG	1 cut(s)	879
SmlI	CTYRAG	2 cut(s)	1148, 1205
SmoI	CTYRAG	2 cut(s)	1148, 1205
Sse9I	AATT	7 cut(s)	565, 755, 762, 784, 834, 924, 1277
SsiI	CCGC	8 cut(s)	15, 51, 60, 133, 186, 188, 474, 1181
SspDI	GGCGCC	1 cut(s)	56
SstI	GAGCTC	2 cut(s)	498, 1017
StyD4I	CCNGG	4 cut(s)	145, 522, 865, 935
StyI	CCWWGG	2 cut(s)	529, 957
TaaI	ACNGT	3 cut(s)	424, 440, 668
TaiI	ACGT	2 cut(s)	450, 683
TaqI	TCGA	3 cut(s)	539, 1086, 1206
TaqII	GACCGA	1 cut(s)	187
TasI	AATT	7 cut(s)	565, 755, 762, 784, 834, 924, 1277
TauI	GCSGC	2 cut(s)	17, 62
TfiI	GAWTC	1 cut(s)	601
TscAI	CASTG	4 cut(s)	235, 612, 1108, 1297
TseFI	GTSAC	2 cut(s)	676, 1019
TseI	GCWGC	8 cut(s)	62, 158, 175, 620, 743, 1046, 1194, 1201
Tsp45I	GTSAC	2 cut(s)	676, 1019
TspDTI	ATGAA	3 cut(s)	294, 385, 863
TspGWI	ACGGA	2 cut(s)	102, 1007
TspRI	CASTG	4 cut(s)	235, 612, 1108, 1297
Tth111I	GACNNNGTC	1 cut(s)	112
VpaK11BI	GGWCC	3 cut(s)	848, 950, 1270
XapI	RAATTY	2 cut(s)	834, 1277
XceI	RCATGY	1 cut(s)	316
XcmI	CCANNNNNNNNNTGG	1 cut(s)	569
XhoI	CTCGAG	1 cut(s)	1205
XmnI	GAANNNNTTC	1 cut(s)	600
Zsp2I	ATGCAT	1 cut(s)	546

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.