Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0004744

Physical Location & Seq

Genomic Coordinates Reverse (-)

42758081 .. 42759493

Gene Structure 1413 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG291700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGTGTGTGTTGAATTTGCAGCTTTTGTTTGCTGCTTCGGAGCTTGGGAATCATGCTTTGTATCAGTTCCAGGCAATAGGCGAAGATCCTGATGTGGAGTCCTCCTCAGCTTTGTTGATGGAAACTGAAGAGGGTTTCCAGCCATTGTGTTTCCAACCTAGAAAACTTAAGAACCTTGTTGGGATTGATCAGGTTGAGAGCTTGATGCCGATAACGGACATGAAGGTCTCTAATCTGTTTGAAGAAGAAACACCTCAAATATTTACGCTTTGCGGCCAGGGTCCTCGTTCATCTCTCAGGATACTAAGACCTGGTTTGGCTATCAGTGAGATGGCTGTGTCAGAGCTTCCTGGCGTACCGAGTGCTGTCTGGACAGTGAAAAAGAAGGTGACTGATGAGTTTGATGCATACATTGTGGTGTCATTTGAAAATGCTACTCTTGTGCTTTCAATTGGTGAGACAATCAAAGAAGTTAATGACAGTGGTTTTCTTGATACTACCCCTTCACTTGCCGTGTCTTTGATTGGTGATGATGCTCTCATGCAAGTTCACCCAAATGGCATTAGGCATATTAGGGAAGGTGGACGTATCAATGAATGGAGAACTCCTGGAAAGAGAATGATTATAATGGTTGGCTCTAATAGACTTCAGGTGGTCATTGCTTTGAGTGGAGGAGAACTTATATACTTTGAGGTTGATATGACTGGTCAACTGGTGGAGGTTGAGAAGCATGAATTGTCTGGAGATCTAGCTTGTCTGGACATTGCCCCAGTACCTGAAGGGAGACAAAGATCTCGTTTCCTTGCAGTTGGCTCATATGACAACACGATTCGTATTTTGTCATTGGATCCTGATGACTGTATGCAGATTCTGAGTGTTCAAAGTGTCTCTTCAATTCCAGAATCTCTCCTCTTTCTTGAGGCTCAGGCATCAGTTAGTGGTGAGGATGGTGCGGATCATCCTGCCAACCTTTTCCTTTATGCCGGTCTACGAACTGGGATTTTGTTCAGAACAGTGGTGGATATGTTGACAGGTCAGCTTTCTGATTCCCATTCCCGATTCTTAGGACTAAGAGCTCGTAAGCTATTTTCTATTAATATAAGAGGCAAGCATGCCATGCTTTGTTTGTCAAGTCGGCCCTGGCTTGGTTATATTCATCAAGGACATTTTCTGTTAACACCACTATCGTATGAGACTCTTGAATATGCGGCCTCATTTTCATCTGATCAATGTGCGGAAGGTGTAGTTGCTGTTGCTGGCAGTTCGTTGAGGGTTTTTACTATCGAAAGATTGGGAGAAACATTTAATGAAACTGTGATTCCTCTGAGGTACACCCCTAGAAAGTTTGTGGTTCAAGTGAAACGAAAGCTTTTGGTAATTATTGAAAGTGATCAAGGAGCATTCACAGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005681 GO:0005684 GO:0005689 GO:0005730 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009555 GO:0009791 GO:0009846 GO:0009856 GO:0009892 GO:0009894 GO:0009895 GO:0009908 GO:0009987 GO:0010467 GO:0010605 GO:0016070 GO:0016071 GO:0019222 GO:0022414 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034641 GO:0035670 GO:0042176 GO:0042177 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0044706 GO:0044877 GO:0046483 GO:0048229 GO:0048367 GO:0048437 GO:0048438 GO:0048440 GO:0048467 GO:0048481 GO:0048519 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0051171 GO:0051172 GO:0051246 GO:0051248 GO:0051704 GO:0055046 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0071005 GO:0071011 GO:0071013 GO:0071704 GO:0080090 GO:0090304 GO:0090567 GO:0097159 GO:0099402 GO:1901360 GO:1901363 GO:1902494 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03040 map03040

Pfam Domains

Protein Families

CPSF_A MMS1_N

Protein Analysis

470

Amino Acids

51.74

Weight (kDa)

5.05

Isoelectric Point (pI)

37.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_RSE1_2nd	PF23726	108 - 428	2.7e-84	RSE1/DDB1/CPSF1 second beta-propeller

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0004744)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G55200 AT3G55200 AT3G55200 AT3G55220
fragaria_vesca	FvH4_1g28630
malus_domestica	MD01G1119800.v1.1 MD07G1189000.v1.1
prunus_persica	Prupe.2G226500_v2.0.a1 Prupe.2G226500_v2.0.a1
pyrus_communis	pycom07g17890
rosa_chinensis	RchiOBHm_Chr1g0365341 RchiOBHm_Chr3g0492631
rosa_laevigata	RLG00000022753 RLG00000027428
rosa_multiflora	Rmu_sc0000831.1_g000021 Rmu_sc0008527.1_g000001 Rmu_sc0010918.1_g000001
rosa_roxburghii	Rroxscaffold_4G00291290 Rroxscaffold_6G00392170
rosa_rugosa	Rorug01G0321300 Rorug03G0255200
rosa_samantha	Rh1AG330200 Rh1BG291700 Rh1CG308300 Rh1DG323400 Rh3AG305400 Rh3BG341900 Rh3CG339300 Rh3DG341200
rosa_wichuraiana	Rw1G029280 Rw3G026890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	626
AasI	GACNNNNNNGTC	1 cut(s)	224
AccI	GTMKAC	1 cut(s)	988
AciI	CCGC	4 cut(s)	273, 953, 1208, 1235
AclWI	GGATC	4 cut(s)	80, 842, 855, 963
AcoI	YGGCCR	1 cut(s)	274
AcsI	RAATTY	1 cut(s)	13
AcuI	CTGAAG	3 cut(s)	147, 632, 798
AfaI	GTAC	3 cut(s)	357, 774, 1331
AfiI	CCNNNNNNNGG	1 cut(s)	1145
AflII	CTTAAG	1 cut(s)	167
AgsI	TTSAA	9 cut(s)	13, 242, 428, 450, 881, 894, 1202, 1355, 1385
AjnI	CCWGG	6 cut(s)	69, 276, 310, 349, 607, 1139
Alw21I	GWGCWC	1 cut(s)	1078
Alw26I	GTCTC	5 cut(s)	232, 452, 778, 892, 1187
AlwI	GGATC	4 cut(s)	80, 842, 855, 963
AlwNI	CAGNNNCTG	2 cut(s)	776, 871
AoxI	GGCC	3 cut(s)	274, 1136, 1209
ApeKI	GCWGC	2 cut(s)	19, 32
ApoI	RAATTY	1 cut(s)	13
AseI	ATTAAT	1 cut(s)	1095
AspS9I	GGNCC	2 cut(s)	281, 1137
AsuHPI	GGTGA	5 cut(s)	400, 467, 539, 542, 953
AvaII	GGWCC	1 cut(s)	281
BamHI	GGATCC	1 cut(s)	847
BanII	GRGCYC	1 cut(s)	1078
Bbv12I	GWGCWC	1 cut(s)	1078
BbvCI	CCTCAGC	1 cut(s)	106
BbvI	GCAGC	2 cut(s)	19, 31
BccI	CCATC	3 cut(s)	112, 325, 941
BceAI	ACGGC	1 cut(s)	497
BciT130I	CCWGG	6 cut(s)	71, 278, 312, 351, 609, 1141
BciVI	GTATCC	1 cut(s)	294
BclI	TGATCA	3 cut(s)	187, 1225, 1390
BcoDI	GTCTC	5 cut(s)	232, 452, 778, 892, 1187
BfaI	CTAG	3 cut(s)	159, 749, 1338
BfrI	CTTAAG	1 cut(s)	167
BfuI	GTATCC	1 cut(s)	294
BglII	AGATCT	2 cut(s)	745, 791
BisI	GCNGC	4 cut(s)	20, 33, 274, 1209
BlsI	GCNGC	4 cut(s)	21, 34, 275, 1210
Bme1390I	CCNGG	6 cut(s)	71, 278, 312, 351, 609, 1141
Bme18I	GGWCC	1 cut(s)	281
BmgT120I	GGNCC	2 cut(s)	281, 1137
BmiI	GGNNCC	2 cut(s)	282, 849
BmrFI	CCNGG	6 cut(s)	71, 278, 312, 351, 609, 1141
BmrI	ACTGGG	2 cut(s)	764, 1005
BmsI	GCATC	4 cut(s)	195, 394, 523, 938
BmuI	ACTGGG	2 cut(s)	764, 1005
BplI	GAGNNNNNCTC	2 cut(s)	89, 121
BpmI	CTGGAG	1 cut(s)	762
Bpu10I	CCTNAGC	2 cut(s)	106, 924
BpuEI	CTTGAG	1 cut(s)	938
BsaI	GGTCTC	1 cut(s)	232
BsaJI	CCNNGG	2 cut(s)	277, 1139
Bsc4I	CCNNNNNNNGG	1 cut(s)	1145
Bse118I	RCCGGY	1 cut(s)	983
Bse1I	ACTGG	4 cut(s)	709, 717, 770, 1000
Bse3DI	GCAATG	2 cut(s)	657, 762
BseBI	CCWGG	6 cut(s)	71, 278, 312, 351, 609, 1141
BseDI	CCNNGG	2 cut(s)	277, 1139
BseGI	GGATG	2 cut(s)	952, 958
BseLI	CCNNNNNNNGG	1 cut(s)	1145
BseMI	GCAATG	2 cut(s)	657, 762
BseMII	CTCAG	5 cut(s)	120, 310, 863, 938, 1316
BseNI	ACTGG	4 cut(s)	709, 717, 770, 1000
BseRI	GAGGAG	3 cut(s)	94, 687, 899
BseXI	GCAGC	2 cut(s)	19, 31
BshFI	GGCC	3 cut(s)	276, 1138, 1211
BsiHKAI	GWGCWC	1 cut(s)	1078
BsiSI	CCGG	1 cut(s)	984
BslI	CCNNNNNNNGG	1 cut(s)	1145
BsmAI	GTCTC	5 cut(s)	232, 452, 778, 892, 1187
BsmI	GAATGC	1 cut(s)	1400
BsnI	GGCC	3 cut(s)	276, 1138, 1211
Bso31I	GGTCTC	1 cut(s)	232
Bsp1286I	GDGCHC	1 cut(s)	1078
Bsp143I	GATC	8 cut(s)	85, 187, 745, 791, 847, 955, 1225, 1390
BspACI	CCGC	4 cut(s)	273, 953, 1208, 1235
BspANI	GGCC	3 cut(s)	276, 1138, 1211
BspCNI	CTCAG	5 cut(s)	119, 309, 864, 937, 1317
BspLI	GGNNCC	2 cut(s)	282, 849
BspPI	GGATC	4 cut(s)	80, 842, 855, 963
BspTI	CTTAAG	1 cut(s)	167
BspTNI	GGTCTC	1 cut(s)	232
BsrDI	GCAATG	2 cut(s)	657, 762
BsrFI	RCCGGY	1 cut(s)	983
BsrI	ACTGG	4 cut(s)	709, 717, 770, 1000
BssAI	RCCGGY	1 cut(s)	983
BssECI	CCNNGG	2 cut(s)	277, 1139
BssMI	GATC	8 cut(s)	85, 187, 745, 791, 847, 955, 1225, 1390
Bst2UI	CCWGG	6 cut(s)	71, 278, 312, 351, 609, 1141
Bst4CI	ACNGT	5 cut(s)	376, 482, 860, 1015, 1315
Bst6I	CTCTTC	2 cut(s)	123, 895
BstAFI	CTTAAG	1 cut(s)	167
BstAPI	GCANNNNNTGC	1 cut(s)	1117
BstC8I	GCNNGC	3 cut(s)	1109, 1113, 1258
BstDEI	CTNAG	8 cut(s)	106, 296, 305, 872, 924, 1063, 1070, 1325
BstF5I	GGATG	2 cut(s)	952, 958
BstKTI	GATC	8 cut(s)	88, 190, 748, 794, 850, 958, 1228, 1393
BstMAI	GTCTC	5 cut(s)	232, 452, 778, 892, 1187
BstMBI	GATC	8 cut(s)	85, 187, 745, 791, 847, 955, 1225, 1390
BstMWI	GCNNNNNNNGC	2 cut(s)	1117, 1406
BstNI	CCWGG	6 cut(s)	71, 278, 312, 351, 609, 1141
BstNSI	RCATGY	1 cut(s)	1115
BstSCI	CCNGG	6 cut(s)	69, 276, 310, 349, 607, 1139
BstV1I	GCAGC	2 cut(s)	19, 31
BstX2I	RGATCY	4 cut(s)	85, 745, 791, 847
BstYI	RGATCY	4 cut(s)	85, 745, 791, 847
BsuI	GTATCC	1 cut(s)	294
BsuRI	GGCC	3 cut(s)	276, 1138, 1211
BtsCI	GGATG	2 cut(s)	952, 958
BtsIMutI	CAGTG	4 cut(s)	331, 381, 487, 1020
Cac8I	GCNNGC	3 cut(s)	1109, 1113, 1258
CaiI	CAGNNNCTG	2 cut(s)	776, 871
Cfr10I	RCCGGY	1 cut(s)	983
Cfr13I	GGNCC	2 cut(s)	281, 1137
CsiI	ACCWGGT	1 cut(s)	310
Csp6I	GTAC	3 cut(s)	356, 773, 1330
CviAII	CATG	6 cut(s)	53, 220, 541, 731, 1112, 1117
CviQI	GTAC	3 cut(s)	356, 773, 1330
DdeI	CTNAG	8 cut(s)	106, 296, 305, 872, 924, 1063, 1070, 1325
DpnI	GATC	8 cut(s)	87, 189, 747, 793, 849, 957, 1227, 1392
DpnII	GATC	8 cut(s)	85, 187, 745, 791, 847, 955, 1225, 1390
DrdI	GACNNNNNNGTC	1 cut(s)	224
DseDI	GACNNNNNNGTC	1 cut(s)	224
EaeI	YGGCCR	1 cut(s)	274
Eam1104I	CTCTTC	2 cut(s)	123, 895
EarI	CTCTTC	2 cut(s)	123, 895
Ecl136II	GAGCTC	1 cut(s)	1076
Eco24I	GRGCYC	1 cut(s)	1078
Eco31I	GGTCTC	1 cut(s)	232
Eco47I	GGWCC	1 cut(s)	281
Eco53kI	GAGCTC	1 cut(s)	1076
Eco57I	CTGAAG	3 cut(s)	147, 632, 798
EcoICRI	GAGCTC	1 cut(s)	1076
EcoO109I	RGGNCCY	1 cut(s)	281
EcoRII	CCWGG	6 cut(s)	69, 276, 310, 349, 607, 1139
EcoT22I	ATGCAT	1 cut(s)	409
EcoT38I	GRGCYC	1 cut(s)	1078
FaeI	CATG	6 cut(s)	56, 223, 544, 734, 1115, 1120
FalI	AAGNNNNNCTT	2 cut(s)	874, 906
FatI	CATG	6 cut(s)	52, 219, 540, 730, 1111, 1116
FauNDI	CATATG	1 cut(s)	817
FbaI	TGATCA	3 cut(s)	187, 1225, 1390
FblI	GTMKAC	1 cut(s)	988
Fnu4HI	GCNGC	4 cut(s)	20, 33, 274, 1209
FokI	GGATG	2 cut(s)	945, 959
FriOI	GRGCYC	1 cut(s)	1078
Fsp4HI	GCNGC	4 cut(s)	20, 33, 274, 1209
FspBI	CTAG	3 cut(s)	159, 749, 1338
GluI	GCNGC	4 cut(s)	20, 33, 274, 1209
GsuI	CTGGAG	1 cut(s)	762
HaeIII	GGCC	3 cut(s)	276, 1138, 1211
HapII	CCGG	1 cut(s)	984
Hin1II	CATG	6 cut(s)	56, 223, 544, 734, 1115, 1120
HincII	GTYRAC	3 cut(s)	710, 1029, 1176
HindII	GTYRAC	3 cut(s)	710, 1029, 1176
HindIII	AAGCTT	1 cut(s)	1367
HinfI	GANTC	9 cut(s)	49, 98, 829, 868, 902, 1046, 1059, 1195, 1318
HpaI	GTTAAC	1 cut(s)	1176
HpaII	CCGG	1 cut(s)	984
HphI	GGTGA	5 cut(s)	400, 467, 539, 542, 953
Hpy166II	GTNNAC	7 cut(s)	550, 584, 710, 989, 1029, 1176, 1332
Hpy188I	TCNGA	7 cut(s)	40, 343, 873, 1010, 1045, 1225, 1326
Hpy8I	GTNNAC	7 cut(s)	550, 584, 710, 989, 1029, 1176, 1332
HpyAV	CCTTC	6 cut(s)	217, 379, 513, 572, 773, 1232
HpyCH4III	ACNGT	5 cut(s)	376, 482, 860, 1015, 1315
HpyCH4IV	ACGT	1 cut(s)	586
HpyCH4V	TGCA	5 cut(s)	19, 407, 544, 806, 865
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1117, 1406
HpyF3I	CTNAG	8 cut(s)	106, 296, 305, 872, 924, 1063, 1070, 1325
HpySE526I	ACGT	1 cut(s)	586
Hsp92II	CATG	6 cut(s)	56, 223, 544, 734, 1115, 1120
Ksp22I	TGATCA	3 cut(s)	187, 1225, 1390
KspAI	GTTAAC	1 cut(s)	1176
Kzo9I	GATC	8 cut(s)	85, 187, 745, 791, 847, 955, 1225, 1390
LmnI	GCTCC	2 cut(s)	40, 1397
Lsp1109I	GCAGC	2 cut(s)	19, 31
LweI	GCATC	4 cut(s)	195, 394, 523, 938
MabI	ACCWGGT	1 cut(s)	310
MaeI	CTAG	3 cut(s)	159, 749, 1338
MaeII	ACGT	1 cut(s)	586
MaeIII	GTNAC	1 cut(s)	388
MalI	GATC	8 cut(s)	87, 189, 747, 793, 849, 957, 1227, 1392
MboI	GATC	8 cut(s)	85, 187, 745, 791, 847, 955, 1225, 1390
MboII	GAAGA	5 cut(s)	95, 140, 254, 257, 882
MfeI	CAATTG	1 cut(s)	450
MflI	RGATCY	4 cut(s)	85, 745, 791, 847
MhlI	GDGCHC	1 cut(s)	1078
MluCI	AATT	5 cut(s)	13, 450, 734, 894, 1377
MlyI	GAGTC	2 cut(s)	107, 1189
MmeI	TCCRAC	1 cut(s)	178
Mph1103I	ATGCAT	1 cut(s)	409
MseI	TTAA	5 cut(s)	168, 474, 1095, 1175, 1305
MslI	CAYNNNNRTG	2 cut(s)	416, 555
MspCI	CTTAAG	1 cut(s)	167
MspI	CCGG	1 cut(s)	984
MspR9I	CCNGG	6 cut(s)	71, 278, 312, 351, 609, 1141
MunI	CAATTG	1 cut(s)	450
Mva1269I	GAATGC	1 cut(s)	1400
MvaI	CCWGG	6 cut(s)	71, 278, 312, 351, 609, 1141
MwoI	GCNNNNNNNGC	2 cut(s)	1117, 1406
NdeI	CATATG	1 cut(s)	817
NdeII	GATC	8 cut(s)	85, 187, 745, 791, 847, 955, 1225, 1390
NlaIII	CATG	6 cut(s)	56, 223, 544, 734, 1115, 1120
NlaIV	GGNNCC	2 cut(s)	282, 849
NmuCI	GTSAC	1 cut(s)	388
NsiI	ATGCAT	1 cut(s)	409
NspI	RCATGY	1 cut(s)	1115
PaeI	GCATGC	1 cut(s)	1115
PctI	GAATGC	1 cut(s)	1400
PfeI	GAWTC	7 cut(s)	49, 829, 868, 902, 1046, 1059, 1318
PfoI	TCCNGGA	1 cut(s)	607
PkrI	GCNGC	4 cut(s)	21, 34, 275, 1210
PleI	GAGTC	2 cut(s)	106, 1189
PpsI	GAGTC	2 cut(s)	106, 1189
PpuMI	RGGWCCY	1 cut(s)	281
PshBI	ATTAAT	1 cut(s)	1095
PsiI	TTATAA	1 cut(s)	626
Psp124BI	GAGCTC	1 cut(s)	1078
Psp5II	RGGWCCY	1 cut(s)	281
Psp6I	CCWGG	6 cut(s)	69, 276, 310, 349, 607, 1139
PspGI	CCWGG	6 cut(s)	69, 276, 310, 349, 607, 1139
PspN4I	GGNNCC	2 cut(s)	282, 849
PspPI	GGNCC	2 cut(s)	281, 1137
PspPPI	RGGWCCY	1 cut(s)	281
PstNI	CAGNNNCTG	2 cut(s)	776, 871
PsuI	RGATCY	4 cut(s)	85, 745, 791, 847
RsaI	GTAC	3 cut(s)	357, 774, 1331
RsaNI	GTAC	3 cut(s)	356, 773, 1330
RseI	CAYNNNNRTG	2 cut(s)	416, 555
SacI	GAGCTC	1 cut(s)	1078
SaqAI	TTAA	5 cut(s)	168, 474, 1095, 1175, 1305
SatI	GCNGC	4 cut(s)	20, 33, 274, 1209
Sau3AI	GATC	8 cut(s)	85, 187, 745, 791, 847, 955, 1225, 1390
Sau96I	GGNCC	2 cut(s)	281, 1137
SchI	GAGTC	2 cut(s)	107, 1189
ScrFI	CCNGG	6 cut(s)	71, 278, 312, 351, 609, 1141
SduI	GDGCHC	1 cut(s)	1078
SexAI	ACCWGGT	1 cut(s)	310
SfaNI	GCATC	4 cut(s)	195, 394, 523, 938
SinI	GGWCC	1 cut(s)	281
SmiMI	CAYNNNNRTG	2 cut(s)	416, 555
SmlI	CTYRAG	2 cut(s)	167, 917
SmoI	CTYRAG	2 cut(s)	167, 917
SphI	GCATGC	1 cut(s)	1115
Sse9I	AATT	5 cut(s)	13, 450, 734, 894, 1377
SsiI	CCGC	4 cut(s)	273, 953, 1208, 1235
SspI	AATATT	1 cut(s)	261
SspMI	CTAG	3 cut(s)	159, 749, 1338
SstI	GAGCTC	1 cut(s)	1078
StyD4I	CCNGG	6 cut(s)	69, 276, 310, 349, 607, 1139
TaaI	ACNGT	5 cut(s)	376, 482, 860, 1015, 1315
TaiI	ACGT	1 cut(s)	589
TaqI	TCGA	1 cut(s)	1284
TasI	AATT	5 cut(s)	13, 450, 734, 894, 1377
TauI	GCSGC	2 cut(s)	276, 1211
TfiI	GAWTC	7 cut(s)	49, 829, 868, 902, 1046, 1059, 1318
Tru1I	TTAA	5 cut(s)	168, 474, 1095, 1175, 1305
Tru9I	TTAA	5 cut(s)	168, 474, 1095, 1175, 1305
TscAI	CASTG	4 cut(s)	331, 381, 487, 1020
TseFI	GTSAC	1 cut(s)	388
TseI	GCWGC	2 cut(s)	19, 32
Tsp45I	GTSAC	1 cut(s)	388
TspDTI	ATGAA	7 cut(s)	236, 279, 609, 747, 1145, 1209, 1323
TspGWI	ACGGA	1 cut(s)	230
TspRI	CASTG	4 cut(s)	331, 381, 487, 1020
Vha464I	CTTAAG	1 cut(s)	167
VpaK11BI	GGWCC	1 cut(s)	281
VspI	ATTAAT	1 cut(s)	1095
XapI	RAATTY	1 cut(s)	13
XceI	RCATGY	1 cut(s)	1115
XmiI	GTMKAC	1 cut(s)	988
XspI	CTAG	3 cut(s)	159, 749, 1338
Zsp2I	ATGCAT	1 cut(s)	409

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.