Prupe.2G241000_v2.0.a1

Glycosyltransferase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0015693
Physical Location & Seq
Forward (+)
26054378 .. 26056009
1632 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G241000.1

Sequence Viewer

Length: 1047 bp
ATGTCACTCACCACCATTTTCCTCCTCCTCCTCTACTTCTCTCTCTTCACCTTCCTCACCACTCACTCCAAACCCCATCTCCCTTCCCCATACCTCTCACCCACCACAATCTTCCCAAACTACCAAAACATGCTCAAATCTTTCAAAATCTTCATCTACAACCCTAACACGCCCTTCACCTTCAACTCTCCATCTCAGTCCCTCTTCTACACCACTCTGACTCTCCAAGATAGCGTCTTCGTCACTCAAGACGCTGAGCAAGCCCAGCTCTTCTTCGTCCCCTTCCCTTCCGATCTCTCCACGCGCTCCATCGCGCGTCTCATCAGAGGCCTTCGCAATGATCTTCCCTACTGGAACCGCACCCTCGGAGCTGACCATTTTTACCTGTCCTGTGCGGGTATCGGGTACGAATCGGACCGAAATCTCGTTGAGCTCAAGAAAAACTCGATCCAGATCTCGTGCTTTCCGACGCCGGCCGGTAAGTTCATACCTCACAAGGACATTTCCCTCCCTCCGCTCGCGAGCTCTCACGCACCAACAAACAAAACGACGAGGTTTTTGGGCTATGCCAGGTTCAATTGGCTAAAGGAGTCAACGTTGGTCAACGAATTGAGCAGCGACCCGGAGTTTCTGATCGAATCCGAACCGTCGGATCTGAATTCTTATGCGGAGAGAATCGCCAGCAGTAAGTTCTGTTTGTTCGAGTATGGAGGAGGCGATGTTTCGGGTATCGGCGAGGCGTTGCGTTTCGGGTGTGTGCCCGCGGTGGTTACTGACCGTCCGATCCAGGACCTGCCGTTCTCGGACGTGCTGAGGTGGCAGGAGATCGCGGTATTCGTGGAACGTAGAGGGGTTGGGGAACTAAAGCGTGTGCTGGCTCGCACGTGCGGGGACCGGCATGAGAAAATGAAGGGGTTGGGCGTGACTGCGAGTCGGCATTTTGTGTGGAATGAGACACCGCAGCCGTTGGATTCGTTTCATACGTTGATGTATCAGCTGTGGTTGAGACGGCACACCATCAGATACGTGCGGAGAGAATCGGCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Exostosin

Protein Analysis

349

Amino Acids

39.76

Weight (kDa)

8.72

Isoelectric Point (pI)

57.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015693)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g23460
malus_domestica MD01G1140500.v1.1 MD07G1204800.v1.1
prunus_persica Prupe.2G241000_v2.0.a1
pyrus_communis pycom07g19130
rosa_chinensis RchiOBHm_Chr1g0368611
rosa_laevigata RLG00000020781 RLG00000027201
rosa_multiflora Rmu_sc0001791.1_g000003 Rmu_sc0011394.1_g000003
rosa_roxburghii Rroxscaffold_4G00288410
rosa_rugosa Rorug01G0343100
rosa_samantha Rh1AG350400 Rh1BG313700 Rh1CG328300 Rh1DG345100

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 801
AccBSI CCGCTC 1 cut(s) 517
AccII CGCG 6 cut(s) 304, 314, 316, 521, 764, 830
AclI AACGTT 1 cut(s) 596
AclWI GGATC 3 cut(s) 442, 660, 778
AcoI YGGCCR 1 cut(s) 474
AcsI RAATTY 1 cut(s) 658
AcvI CACGTG 1 cut(s) 885
AcyI GRCGYC 1 cut(s) 470
AfaI GTAC 1 cut(s) 407
AgsI TTSAA 3 cut(s) 145, 184, 577
AhdI GACNNNNNGTC 1 cut(s) 930
AjiI CACGTC 1 cut(s) 808
AjnI CCWGG 2 cut(s) 569, 786
AloI GAACNNNNNNTCC 2 cut(s) 782, 814
AluBI AGCT 5 cut(s) 268, 371, 433, 525, 997
AluI AGCT 5 cut(s) 268, 371, 433, 525, 997
Alw21I GWGCWC 2 cut(s) 435, 527
Alw26I GTCTC 3 cut(s) 323, 947, 1000
AlwI GGATC 3 cut(s) 442, 660, 778
AlwNI CAGNNNCTG 1 cut(s) 793
AoxI GGCC 2 cut(s) 328, 474
ApeKI GCWGC 2 cut(s) 615, 961
ApoI RAATTY 1 cut(s) 658
ArsI GACNNNNNNTTYG 2 cut(s) 541, 573
AspLEI GCGC 2 cut(s) 306, 316
AspS9I GGNCC 3 cut(s) 415, 790, 892
AsuC2I CCSGG 1 cut(s) 623
AsuHPI GGTGA 4 cut(s) 40, 49, 90, 169
AvaII GGWCC 3 cut(s) 415, 790, 892
BaeGI GKGCMC 1 cut(s) 762
BanII GRGCYC 2 cut(s) 435, 527
BauI CACGAG 1 cut(s) 457
BbrPI CACGTG 1 cut(s) 885
BbsI GAAGAC 1 cut(s) 229
Bbv12I GWGCWC 2 cut(s) 435, 527
BbvCI CCTCAGC 1 cut(s) 812
BbvI GCAGC 2 cut(s) 627, 973
BccI CCATC 4 cut(s) 84, 199, 317, 1025
BceAI ACGGC 3 cut(s) 781, 949, 1025
BciT130I CCWGG 2 cut(s) 571, 788
BcnI CCSGG 1 cut(s) 623
BcoDI GTCTC 3 cut(s) 323, 947, 1000
BfuAI ACCTGC 1 cut(s) 801
BglII AGATCT 1 cut(s) 453
BisI GCNGC 2 cut(s) 616, 962
BlpI GCTNAGC 1 cut(s) 255
BlsI GCNGC 2 cut(s) 617, 963
Bme1390I CCNGG 3 cut(s) 571, 623, 788
Bme18I GGWCC 3 cut(s) 415, 790, 892
BmeRI GACNNNNNGTC 1 cut(s) 930
BmgBI CACGTC 1 cut(s) 808
BmgT120I GGNCC 3 cut(s) 415, 790, 892
BmiI GGNNCC 2 cut(s) 356, 893
BmrFI CCNGG 3 cut(s) 571, 623, 788
BpiI GAAGAC 1 cut(s) 229
Bpu10I CCTNAGC 1 cut(s) 812
Bpu1102I GCTNAGC 1 cut(s) 255
BpuEI CTTGAG 2 cut(s) 231, 419
BpuMI CCSGG 1 cut(s) 623
BsaAI YACGTR 2 cut(s) 885, 1027
BsaBI GATNNNNATC 1 cut(s) 452
BsaHI GRCGYC 1 cut(s) 470
BsaJI CCNNGG 2 cut(s) 364, 762
BsaXI ACNNNNNCTCC 6 cut(s) 63, 93, 581, 611, 705, 735
Bse118I RCCGGY 3 cut(s) 472, 476, 894
Bse1I ACTGG 1 cut(s) 356
Bse3DI GCAATG 1 cut(s) 343
Bse8I GATNNNNATC 1 cut(s) 452
BseBI CCWGG 2 cut(s) 571, 788
BseDI CCNNGG 2 cut(s) 364, 762
BseJI GATNNNNATC 1 cut(s) 452
BseMI GCAATG 1 cut(s) 343
BseMII CTCAG 3 cut(s) 209, 246, 803
BseNI ACTGG 1 cut(s) 356
BseRI GAGGAG 4 cut(s) 14, 17, 20, 726
BseSI GKGCMC 1 cut(s) 762
BseX3I CGGCCG 1 cut(s) 474
BseXI GCAGC 2 cut(s) 627, 973
BseYI CCCAGC 1 cut(s) 264
Bsh1236I CGCG 6 cut(s) 304, 314, 316, 521, 764, 830
Bsh1285I CGRYCG 1 cut(s) 477
BshFI GGCC 2 cut(s) 330, 476
BsiEI CGRYCG 1 cut(s) 477
BsiHKAI GWGCWC 2 cut(s) 435, 527
BsiSI CCGG 4 cut(s) 473, 477, 623, 895
BslFI GGGAC 3 cut(s) 184, 263, 905
BsmAI GTCTC 3 cut(s) 323, 947, 1000
BsmBI CGTCTC 2 cut(s) 323, 1000
BsmFI GGGAC 3 cut(s) 184, 263, 905
BsnI GGCC 2 cut(s) 330, 476
Bsp1286I GDGCHC 3 cut(s) 435, 527, 762
Bsp143I GATC 8 cut(s) 292, 340, 447, 453, 633, 652, 783, 825
Bsp1720I GCTNAGC 1 cut(s) 255
Bsp68I TCGCGA 1 cut(s) 521
BspANI GGCC 2 cut(s) 330, 476
BspCNI CTCAG 3 cut(s) 208, 247, 804
BspFNI CGCG 6 cut(s) 304, 314, 316, 521, 764, 830
BspLI GGNNCC 2 cut(s) 356, 893
BspMI ACCTGC 1 cut(s) 801
BspPI GGATC 3 cut(s) 442, 660, 778
BspQI GCTCTTC 1 cut(s) 275
BsrBI CCGCTC 1 cut(s) 517
BsrDI GCAATG 1 cut(s) 343
BsrFI RCCGGY 3 cut(s) 472, 476, 894
BsrI ACTGG 1 cut(s) 356
BssAI RCCGGY 3 cut(s) 472, 476, 894
BssECI CCNNGG 2 cut(s) 364, 762
BssMI GATC 8 cut(s) 292, 340, 447, 453, 633, 652, 783, 825
BssNI GRCGYC 1 cut(s) 470
BssSI CACGAG 1 cut(s) 457
Bst2BI CACGAG 1 cut(s) 457
Bst2UI CCWGG 2 cut(s) 571, 788
Bst4CI ACNGT 2 cut(s) 648, 779
Bst6I CTCTTC 3 cut(s) 50, 209, 275
BstACI GRCGYC 1 cut(s) 470
BstBAI YACGTR 2 cut(s) 885, 1027
BstC8I GCNNGC 8 cut(s) 261, 474, 519, 523, 682, 762, 876, 880
BstDEI CTNAG 4 cut(s) 195, 255, 812, 1044
BstDSI CCRYGG 1 cut(s) 762
BstFNI CGCG 6 cut(s) 304, 314, 316, 521, 764, 830
BstHHI GCGC 2 cut(s) 306, 316
BstKTI GATC 8 cut(s) 295, 343, 450, 456, 636, 655, 786, 828
BstMAI GTCTC 3 cut(s) 323, 947, 1000
BstMBI GATC 8 cut(s) 292, 340, 447, 453, 633, 652, 783, 825
BstMCI CGRYCG 1 cut(s) 477
BstMWI GCNNNNNNNGC 3 cut(s) 260, 265, 817
BstNI CCWGG 2 cut(s) 571, 788
BstNSI RCATGY 1 cut(s) 133
BstSCI CCNGG 3 cut(s) 569, 621, 786
BstSLI GKGCMC 1 cut(s) 762
BstUI CGCG 6 cut(s) 304, 314, 316, 521, 764, 830
BstV1I GCAGC 2 cut(s) 627, 973
BstV2I GAAGAC 1 cut(s) 229
BstX2I RGATCY 2 cut(s) 453, 652
BstYI RGATCY 2 cut(s) 453, 652
BstZI CGGCCG 1 cut(s) 474
BsuRI GGCC 2 cut(s) 330, 476
BtgI CCRYGG 1 cut(s) 762
BtgZI GCGATG 2 cut(s) 295, 732
BtrI CACGTC 1 cut(s) 808
BtuMI TCGCGA 1 cut(s) 521
BveI ACCTGC 1 cut(s) 801
Cac8I GCNNGC 8 cut(s) 261, 474, 519, 523, 682, 762, 876, 880
CaiI CAGNNNCTG 1 cut(s) 793
CfoI GCGC 2 cut(s) 306, 316
Cfr10I RCCGGY 3 cut(s) 472, 476, 894
Cfr13I GGNCC 3 cut(s) 415, 790, 892
Cfr42I CCGCGG 1 cut(s) 765
CpoI CGGWCCG 1 cut(s) 415
CseI GACGC 4 cut(s) 223, 260, 305, 478
Csp6I GTAC 1 cut(s) 406
CspI CGGWCCG 1 cut(s) 415
CviAII CATG 2 cut(s) 130, 899
CviQI GTAC 1 cut(s) 406
DdeI CTNAG 4 cut(s) 195, 255, 812, 1044
DpnI GATC 8 cut(s) 294, 342, 449, 455, 635, 654, 785, 827
DpnII GATC 8 cut(s) 292, 340, 447, 453, 633, 652, 783, 825
DriI GACNNNNNGTC 1 cut(s) 930
EaeI YGGCCR 1 cut(s) 474
EagI CGGCCG 1 cut(s) 474
Eam1104I CTCTTC 3 cut(s) 50, 209, 275
Eam1105I GACNNNNNGTC 1 cut(s) 930
EarI CTCTTC 3 cut(s) 50, 209, 275
Ecl136II GAGCTC 2 cut(s) 433, 525
EclXI CGGCCG 1 cut(s) 474
Eco147I AGGCCT 1 cut(s) 330
Eco24I GRGCYC 2 cut(s) 435, 527
Eco47I GGWCC 3 cut(s) 415, 790, 892
Eco52I CGGCCG 1 cut(s) 474
Eco53kI GAGCTC 2 cut(s) 433, 525
Eco72I CACGTG 1 cut(s) 885
EcoICRI GAGCTC 2 cut(s) 433, 525
EcoO109I RGGNCCY 1 cut(s) 790
EcoRI GAATTC 1 cut(s) 658
EcoRII CCWGG 2 cut(s) 569, 786
EcoT38I GRGCYC 2 cut(s) 435, 527
Esp3I CGTCTC 2 cut(s) 323, 1000
FaeI CATG 2 cut(s) 133, 902
FaiI YATR 8 cut(s) 91, 131, 488, 567, 666, 708, 900, 981
FaqI GGGAC 3 cut(s) 184, 263, 905
FatI CATG 2 cut(s) 129, 898
FauI CCCGC 3 cut(s) 388, 769, 881
Fnu4HI GCNGC 2 cut(s) 616, 962
FriOI GRGCYC 2 cut(s) 435, 527
Fsp4HI GCNGC 2 cut(s) 616, 962
GlaI GCGC 2 cut(s) 305, 315
GluI GCNGC 2 cut(s) 616, 962
GsaI CCCAGC 1 cut(s) 268
HaeIII GGCC 2 cut(s) 330, 476
HapII CCGG 4 cut(s) 473, 477, 623, 895
HgaI GACGC 4 cut(s) 223, 260, 305, 478
HhaI GCGC 2 cut(s) 306, 316
Hin1I GRCGYC 1 cut(s) 470
Hin1II CATG 2 cut(s) 133, 902
Hin6I GCGC 2 cut(s) 304, 314
HinP1I GCGC 2 cut(s) 304, 314
HincII GTYRAC 2 cut(s) 594, 604
HindII GTYRAC 2 cut(s) 594, 604
HinfI GANTC 8 cut(s) 220, 410, 590, 638, 675, 931, 971, 1037
HpaII CCGG 4 cut(s) 473, 477, 623, 895
HphI GGTGA 4 cut(s) 40, 49, 90, 169
Hpy166II GTNNAC 2 cut(s) 594, 604
Hpy188III TCNNGA 4 cut(s) 248, 436, 451, 520
Hpy8I GTNNAC 2 cut(s) 594, 604
Hpy99I CGWCG 3 cut(s) 472, 553, 652
HpyAV CCTTC 8 cut(s) 61, 93, 184, 190, 292, 297, 341, 904
HpyCH4III ACNGT 2 cut(s) 648, 779
HpyCH4IV ACGT 6 cut(s) 596, 807, 844, 884, 983, 1026
HpyF10VI GCNNNNNNNGC 3 cut(s) 260, 265, 817
HpyF3I CTNAG 4 cut(s) 195, 255, 812, 1044
HpySE526I ACGT 6 cut(s) 596, 807, 844, 884, 983, 1026
Hsp92I GRCGYC 1 cut(s) 470
Hsp92II CATG 2 cut(s) 133, 902
HspAI GCGC 2 cut(s) 304, 314
KroI GCCGGC 1 cut(s) 472
KroNI GCCGGC 1 cut(s) 474
KspI CCGCGG 1 cut(s) 765
Kzo9I GATC 8 cut(s) 292, 340, 447, 453, 633, 652, 783, 825
LguI GCTCTTC 1 cut(s) 275
LmnI GCTCC 2 cut(s) 311, 368
Lsp1109I GCAGC 2 cut(s) 627, 973
MaeII ACGT 6 cut(s) 596, 807, 844, 884, 983, 1026
MaeIII GTNAC 4 cut(s) 3, 241, 769, 922
MalI GATC 8 cut(s) 294, 342, 449, 455, 635, 654, 785, 827
MbiI CCGCTC 1 cut(s) 517
MboI GATC 8 cut(s) 292, 340, 447, 453, 633, 652, 783, 825
MboII GAAGA 8 cut(s) 37, 103, 142, 196, 229, 262, 265, 335
MfeI CAATTG 1 cut(s) 577
MflI RGATCY 2 cut(s) 453, 652
MhlI GDGCHC 3 cut(s) 435, 527, 762
MluCI AATT 3 cut(s) 577, 608, 658
MlyI GAGTC 3 cut(s) 214, 599, 940
MmeI TCCRAC 3 cut(s) 491, 630, 948
MroNI GCCGGC 1 cut(s) 472
MspA1I CMGCKG 2 cut(s) 764, 997
MspI CCGG 4 cut(s) 473, 477, 623, 895
MspR9I CCNGG 3 cut(s) 571, 623, 788
MunI CAATTG 1 cut(s) 577
MvaI CCWGG 2 cut(s) 571, 788
MvnI CGCG 6 cut(s) 304, 314, 316, 521, 764, 830
MwoI GCNNNNNNNGC 3 cut(s) 260, 265, 817
NaeI GCCGGC 1 cut(s) 474
NciI CCSGG 1 cut(s) 623
NdeII GATC 8 cut(s) 292, 340, 447, 453, 633, 652, 783, 825
NgoMIV GCCGGC 1 cut(s) 472
NlaIII CATG 2 cut(s) 133, 902
NlaIV GGNNCC 2 cut(s) 356, 893
NmuCI GTSAC 3 cut(s) 3, 241, 922
NruI TCGCGA 1 cut(s) 521
NspI RCATGY 1 cut(s) 133
PceI AGGCCT 1 cut(s) 330
PciSI GCTCTTC 1 cut(s) 275
PcsI WCGNNNNNNNCGW 3 cut(s) 464, 834, 980
PdiI GCCGGC 1 cut(s) 474
PfeI GAWTC 5 cut(s) 410, 638, 675, 971, 1037
PfoI TCCNGGA 1 cut(s) 786
PkrI GCNGC 2 cut(s) 617, 963
PleI GAGTC 3 cut(s) 214, 598, 939
PmaCI CACGTG 1 cut(s) 885
PmlI CACGTG 1 cut(s) 885
PpsI GAGTC 3 cut(s) 214, 598, 939
Ppu21I YACGTR 2 cut(s) 885, 1027
PpuMI RGGWCCY 1 cut(s) 790
Psp124BI GAGCTC 2 cut(s) 435, 527
Psp1406I AACGTT 1 cut(s) 596
Psp5II RGGWCCY 1 cut(s) 790
Psp6I CCWGG 2 cut(s) 569, 786
PspCI CACGTG 1 cut(s) 885
PspFI CCCAGC 1 cut(s) 264
PspGI CCWGG 2 cut(s) 569, 786
PspN4I GGNNCC 2 cut(s) 356, 893
PspPI GGNCC 3 cut(s) 415, 790, 892
PspPPI RGGWCCY 1 cut(s) 790
PstNI CAGNNNCTG 1 cut(s) 793
PsuI RGATCY 2 cut(s) 453, 652
PvuII CAGCTG 1 cut(s) 997
RruI TCGCGA 1 cut(s) 521
RsaI GTAC 1 cut(s) 407
RsaNI GTAC 1 cut(s) 406
Rsr2I CGGWCCG 1 cut(s) 415
RsrII CGGWCCG 1 cut(s) 415
SacI GAGCTC 2 cut(s) 435, 527
SacII CCGCGG 1 cut(s) 765
SapI GCTCTTC 1 cut(s) 275
SatI GCNGC 2 cut(s) 616, 962
Sau3AI GATC 8 cut(s) 292, 340, 447, 453, 633, 652, 783, 825
Sau96I GGNCC 3 cut(s) 415, 790, 892
SchI GAGTC 3 cut(s) 214, 599, 940
ScrFI CCNGG 3 cut(s) 571, 623, 788
SduI GDGCHC 3 cut(s) 435, 527, 762
Sfr303I CCGCGG 1 cut(s) 765
SgrBI CCGCGG 1 cut(s) 765
SinI GGWCC 3 cut(s) 415, 790, 892
SmlI CTYRAG 2 cut(s) 246, 434
SmoI CTYRAG 2 cut(s) 246, 434
Sse9I AATT 3 cut(s) 577, 608, 658
SseBI AGGCCT 1 cut(s) 330
SstI GAGCTC 2 cut(s) 435, 527
StuI AGGCCT 1 cut(s) 330
StyD4I CCNGG 3 cut(s) 569, 621, 786
TaaI ACNGT 2 cut(s) 648, 779
TaiI ACGT 6 cut(s) 599, 810, 847, 887, 986, 1029
TaqI TCGA 3 cut(s) 446, 636, 702
TaqII GACCGA 1 cut(s) 432
TasI AATT 3 cut(s) 577, 608, 658
TfiI GAWTC 5 cut(s) 410, 638, 675, 971, 1037
TseFI GTSAC 3 cut(s) 3, 241, 922
TseI GCWGC 2 cut(s) 615, 961
Tsp45I GTSAC 3 cut(s) 3, 241, 922
TspDTI ATGAA 4 cut(s) 142, 475, 923, 968
VpaK11BI GGWCC 3 cut(s) 415, 790, 892
XapI RAATTY 1 cut(s) 658
XceI RCATGY 1 cut(s) 133
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.